BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCS16e03.yg.2.1
(608 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD01584.1| histidine kinase 2 [Zea mays] 324 1e-87
gb|ABB76249.1| hybrid type histidine kinase [Oryza sativa (... 302 6e-81
gb|AAO59548.1| histidine kinase [Oryza sativa (indica culti... 302 6e-81
gb|AAO59549.1| histidine kinase [Oryza sativa (indica culti... 302 6e-81
ref|XP_463649.1| putative histidine kinase [Oryza sativa (j... 299 5e-80
dbj|BAD88327.1| putative histidine kinase 2 [Oryza sativa (... 299 5e-80
ref|NP_564276.1| AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Ara... 219 7e-56
gb|AAF99730.1| F17L21.11 [Arabidopsis thaliana] 219 7e-56
emb|CAD24778.1| histidine kinase-like protein [Oryza sativa] 200 3e-50
dbj|BAE80689.1| histidine kinase [Zea mays] 177 2e-43
dbj|BAE80688.1| histidine kinase [Zea mays] 172 7e-42
dbj|BAE80687.1| histidine kinase [Zea mays] 172 7e-42
ref|XP_469566.1| putative histidine kinase [Oryza sativa (j... 164 3e-39
gb|AAP37766.1| At5g35750 [Arabidopsis thaliana] >gi|2731184... 160 4e-38
ref|NP_568532.1| AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) [Ara... 160 4e-38
dbj|BAB09274.1| histidine kinase-like protein [Arabidopsis ... 160 4e-38
gb|AAM14700.1| cytokinin receptor [Catharanthus roseus] 158 1e-37
ref|NP_849925.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis th... 157 2e-37
dbj|BAB33311.1| cytokinin receptor CRE1b [Arabidopsis thali... 157 2e-37
ref|NP_565277.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis th... 157 2e-37
dbj|BAB33310.1| cytokinin receptor CRE1a [Arabidopsis thali... 157 2e-37
ref|NP_921024.1| putative histidine kinase [Oryza sativa (j... 153 5e-36
gb|AAK13126.1| Histidine-kinase like protein [Oryza sativa ... 153 5e-36
dbj|BAB20583.1| histidine kinase 1 [Zea mays] 150 4e-35
gb|ABD49494.1| cytokinin receptor 1 [Physcomitrella patens] 150 4e-35
emb|CAF31355.1| putative histidine kinase [Cucurbita maxima] 147 3e-34
dbj|BAE80686.1| histidine kinase [Zea mays] 146 6e-34
ref|XP_467688.1| putative histidine kinase 1 [Oryza sativa ... 145 1e-33
dbj|BAD01586.1| histidine kinase 3 [Zea mays] 138 2e-31
dbj|BAD01585.1| histidine kinase 3 [Zea mays] 138 2e-31
gb|ABD49495.1| cytokinin receptor 2 [Physcomitrella patens] 134 2e-30
gb|AAY32330.1| AHK1 [Phyllostachys praecox] 104 2e-21
gb|AAZ45308.1| PAS [Dechloromonas aromatica RCB] >gi|719061... 92 1e-17
ref|ZP_00317250.1| COG0642: Signal transduction histidine k... 88 2e-16
ref|ZP_00807318.1| PAS [Rhodopseudomonas palustris BisA53] ... 86 1e-15
gb|AAK25585.1| sensor histidine kinase/response regulator [... 85 2e-15
ref|NP_900860.1| probable sensor/response regulator hybrid ... 84 5e-15
ref|ZP_01077297.1| Serine/Threonine protein kinase and Sign... 83 6e-15
ref|YP_476201.1| sensory box histidine kinase/response regu... 83 6e-15
gb|EAN29348.1| PAS [Magnetococcus sp. MC-1] >gi|69256755|re... 83 8e-15
gb|AAZ46848.1| PAS [Dechloromonas aromatica RCB] >gi|719077... 83 8e-15
ref|ZP_00316318.1| COG0642: Signal transduction histidine k... 82 1e-14
ref|ZP_00054204.1| COG0642: Signal transduction histidine k... 82 1e-14
dbj|BAE50760.1| Signal transduction histidine kinase [Magne... 82 2e-14
ref|ZP_00054434.2| COG0784: FOG: CheY-like receiver [Magnet... 82 2e-14
gb|AAL59700.1| putative histidine kinase [Vibrio cholerae] 81 2e-14
gb|ABA87031.1| putative histidine kinase [Vibrio cholerae] 81 2e-14
ref|ZP_00760913.1| COG0642: Signal transduction histidine k... 81 2e-14
emb|CAE77957.1| Sensory transduction histidine kinase [Bdel... 81 3e-14
ref|ZP_00527745.1| PAS [Chlorobium phaeobacteroides DSM 266... 81 3e-14
ref|ZP_00676542.1| PAS [Pelobacter propionicus DSM 2379] >g... 81 3e-14
gb|AAM05416.1| sensory transduction histidine kinase [Metha... 80 5e-14
emb|CAG35088.1| probable two-component system sensory/regul... 80 5e-14
dbj|BAE51097.1| Signal transduction histidine kinase [Magne... 80 7e-14
ref|NP_901251.1| probable sensor/response hybrid [Chromobac... 80 7e-14
gb|EAN26861.1| PAS [Magnetococcus sp. MC-1] >gi|69262364|re... 79 9e-14
ref|ZP_01116725.1| GGDEF family protein [Reinekea sp. MED29... 79 9e-14
dbj|BAE52950.1| Signal transduction histidine kinase [Magne... 79 9e-14
gb|ABB30326.1| histidine kinase [Geobacter metallireducens ... 79 1e-13
dbj|BAE52539.1| Signal transduction histidine kinase [Magne... 79 1e-13
ref|ZP_01090362.1| ammonium/methylammonium permease [Blasto... 78 2e-13
ref|ZP_01118139.1| sensory transduction histidine kinase [P... 78 2e-13
emb|CAE10078.1| HYBRID HISTIDINE KINASE [Wolinella succinog... 78 2e-13
ref|YP_434811.1| Signal transduction histidine kinase [Hahe... 78 2e-13
dbj|BAC59810.1| sensor histidine kinase/response regulator ... 78 3e-13
ref|ZP_01132440.1| hypothetical protein PTD2_04516 [Pseudoa... 78 3e-13
gb|AAR35690.1| sensory box histidine kinase/response regula... 78 3e-13
gb|AAZ47577.1| PAS [Dechloromonas aromatica RCB] >gi|719084... 77 3e-13
emb|CAE25761.1| sensor histidine kinase with a response reg... 77 3e-13
ref|ZP_00676854.1| PAS [Pelobacter propionicus DSM 2379] >g... 77 3e-13
ref|ZP_01090668.1| FOG: CheY-like receiver [Blastopirellula... 77 3e-13
gb|ABC22833.1| PAS/PAC Sensor Hybrid Histidine Kinase [Rhod... 77 3e-13
dbj|BAC48514.1| two-component hybrid sensor and regulator [... 77 3e-13
ref|ZP_01167898.1| serine/threonine kinase with two-compone... 77 4e-13
ref|ZP_00054895.2| COG0642: Signal transduction histidine k... 77 4e-13
ref|ZP_00512843.1| PAS [Chlorobium limicola DSM 245] >gi|67... 77 4e-13
ref|ZP_00108815.1| COG0642: Signal transduction histidine k... 77 4e-13
ref|ZP_01154229.1| PAS [Methanosaeta thermophila PT] >gi|88... 77 4e-13
dbj|BAE49914.1| Signal transduction histidine kinase [Magne... 77 4e-13
gb|AAZ47484.1| PAS [Dechloromonas aromatica RCB] >gi|719083... 77 6e-13
gb|EAO25129.1| Response regulator receiver:ATP-binding regi... 77 6e-13
ref|ZP_00658601.1| PAS [Nocardioides sp. JS614] >gi|7115617... 77 6e-13
ref|ZP_00815187.1| PAS [Shewanella putrefaciens CN-32] >gi|... 76 7e-13
ref|ZP_01064298.1| signal transduction histidine kinase [Vi... 76 7e-13
ref|ZP_00944419.1| Hypothetical Protein RRSL_02899 [Ralston... 76 7e-13
ref|NP_900552.1| probable sensor/response regulator hybrid ... 76 7e-13
ref|ZP_01109417.1| multi-sensor hybrid histidine kinase [Al... 76 7e-13
ref|ZP_00667736.1| Response regulator receiver:GAF:ATP-bind... 76 7e-13
ref|ZP_00676459.1| PAS [Pelobacter propionicus DSM 2379] >g... 76 7e-13
ref|ZP_00533448.1| ATP-binding region, ATPase-like:Histidin... 76 7e-13
ref|ZP_00860356.1| Response regulator receiver:ATP-binding ... 76 7e-13
gb|ABB31996.1| histidine kinase [Geobacter metallireducens ... 76 1e-12
dbj|BAB50602.1| Hybrid sensory histidine kinase [Mesorhizob... 76 1e-12
gb|AAZ64391.1| PAS [Ralstonia eutropha JMP134] >gi|73538868... 76 1e-12
gb|AAO07892.1| FOG: CheY-like receiver [Vibrio vulnificus C... 76 1e-12
ref|ZP_00585281.1| PAS [Shewanella amazonensis SB2B] >gi|68... 76 1e-12
gb|AAK25064.1| sensor histidine kinase/response regulator [... 76 1e-12
dbj|BAC97498.1| sensory box sensor histidine kinase/respons... 76 1e-12
gb|AAZ47736.1| PAS [Dechloromonas aromatica RCB] >gi|719086... 76 1e-12
gb|ABB37345.1| periplasmic sensor hybrid histidine kinase [... 75 1e-12
ref|ZP_00988487.1| signal transduction histidine kinase [Vi... 75 1e-12
ref|YP_476763.1| sensory box histidine kinase/response regu... 75 1e-12
gb|EAN29480.1| PAS [Magnetococcus sp. MC-1] >gi|69256602|re... 75 1e-12
gb|AAZ48763.1| Response regulator receiver:ATP-binding regi... 75 1e-12
gb|AAZ44799.1| PAS [Dechloromonas aromatica RCB] >gi|719056... 75 1e-12
ref|ZP_00591131.1| PAS [Prosthecochloris aestuarii DSM 271]... 75 1e-12
ref|ZP_00054637.2| COG0642: Signal transduction histidine k... 75 2e-12
gb|AAA20829.1| pectate lyase 75 2e-12
dbj|BAE50121.1| Signal transduction histidine kinase [Magne... 75 2e-12
gb|AAZ48415.1| Response regulator receiver:ATP-binding regi... 75 2e-12
gb|EAN29352.1| PAS [Magnetococcus sp. MC-1] >gi|69256759|re... 75 2e-12
ref|ZP_00505065.1| PAS [Clostridium thermocellum ATCC 27405... 75 2e-12
ref|ZP_00837289.1| PAS [Shewanella sp. PV-4] >gi|78360957|g... 75 2e-12
ref|ZP_00659124.1| Response regulator receiver:ATP-binding ... 75 2e-12
gb|EAN71793.1| PAS [Shewanella denitrificans OS217] >gi|699... 75 2e-12
ref|ZP_00762422.1| COG0642: Signal transduction histidine k... 75 2e-12
ref|ZP_00660379.1| Response regulator receiver:ATP-binding ... 75 2e-12
gb|AAR29885.1| putative histidine kinase HHK6p [Cochliobolu... 75 2e-12
dbj|BAC88659.1| two-component hybrid sensor and regulator [... 75 2e-12
ref|ZP_00530683.1| Response regulator receiver:ATP-binding ... 75 2e-12
emb|CAA65047.1| putative sensor kinase [Synechocystis sp.] 75 2e-12
dbj|BAB50556.1| Hybrid sensory histidine kinase [Mesorhizob... 75 2e-12
dbj|BAA17056.1| hybrid sensory kinase [Synechocystis sp. PC... 75 2e-12
ref|YP_217885.1| sensory histidine kinase [Salmonella enter... 74 3e-12
gb|AAL21838.1| sensory histidine kinase [Salmonella typhimu... 74 3e-12
gb|AAV78673.1| sensor protein [Salmonella enterica subsp. e... 74 3e-12
emb|CAD06072.1| sensor protein [Salmonella enterica subsp. ... 74 3e-12
dbj|BAA16571.2| hybrid sensory histidine kinase, in two-com... 74 3e-12
gb|AAN44287.1| sensor-regulator [Shigella flexneri 2a str. ... 74 3e-12
ref|YP_409032.1| sensor-regulator [Shigella boydii Sb227] >... 74 3e-12
gb|AAG57899.1| sensor-regulator, activates OmpR by phophory... 74 3e-12
ref|ZP_00728469.1| COG0642: Signal transduction histidine k... 74 3e-12
ref|ZP_00725643.1| COG0642: Signal transduction histidine k... 74 3e-12
ref|ZP_01056736.1| Hybrid sensory histidine kinase [Roseoba... 74 3e-12
gb|EAN28038.1| Response regulator receiver:ATP-binding regi... 74 3e-12
gb|EAN26742.1| Response regulator receiver:ATP-binding regi... 74 3e-12
gb|ABA57772.1| Hybrid signal transduction histidine kinase ... 74 3e-12
gb|AAK25037.1| sensor histidine kinase/response regulator [... 74 3e-12
gb|EAN28230.1| Response regulator receiver:ATP-binding regi... 74 3e-12
gb|AAZ45761.1| ATP-binding region, ATPase-like:Histidine ki... 74 3e-12
gb|AAZ47676.1| Response regulator receiver:ATP-binding regi... 74 3e-12
gb|EAN26968.1| Response regulator receiver:ATP-binding regi... 74 3e-12
ref|ZP_01134009.1| sensor histidine kinase with multiple PA... 74 4e-12
ref|ZP_00244380.1| COG0642: Signal transduction histidine k... 74 4e-12
ref|NP_716212.1| sensory box histidine kinase/response regu... 74 4e-12
ref|ZP_00590975.1| PAS [Prosthecochloris aestuarii DSM 271]... 74 4e-12
ref|ZP_00853304.1| PAS [Shewanella sp. MR-7] >gi|78512017|g... 74 4e-12
ref|ZP_00849114.1| PAS [Shewanella sp. ANA-3] >gi|78508081|... 74 4e-12
ref|ZP_00815127.1| PAS [Shewanella putrefaciens CN-32] >gi|... 74 4e-12
ref|ZP_00880979.1| PAS [Shewanella sp. MR-4] >gi|82406587|g... 74 4e-12
ref|NP_716490.1| sensory box histidine kinase/response regu... 74 4e-12
ref|ZP_00419367.1| PAS [Azotobacter vinelandii AvOP] >gi|67... 74 4e-12
ref|ZP_00581337.1| PAS [Shewanella baltica OS155] >gi|68520... 74 4e-12
dbj|BAE51999.1| Signal transduction histidine kinase [Magne... 74 4e-12
dbj|BAE52242.1| Sensor protein gacS [Magnetospirillum magne... 74 4e-12
ref|ZP_00849349.1| PAS [Shewanella sp. ANA-3] >gi|78507503|... 74 4e-12
ref|NP_744030.1| sensor histidine kinase/response regulator... 74 4e-12
ref|ZP_00902914.1| Response regulator receiver:ATP-binding ... 74 4e-12
ref|YP_477864.1| sensory box histidine kinase/response regu... 74 4e-12
gb|EAN29674.1| PAS [Magnetococcus sp. MC-1] >gi|69256468|re... 74 5e-12
gb|AAO09997.1| Signal transduction histidine kinase [Vibrio... 74 5e-12
gb|AAK54091.2| histidine kinase DhkJ [Dictyostelium discoid... 74 5e-12
ref|XP_642053.1| histidine kinase [Dictyostelium discoideum... 74 5e-12
emb|CAI89330.1| putative two-component hybrid sensor and re... 74 5e-12
ref|ZP_00855004.1| PAS [Shewanella sp. MR-7] >gi|78510268|g... 74 5e-12
ref|ZP_00882182.1| PAS [Shewanella sp. MR-4] >gi|82405384|g... 74 5e-12
ref|NP_902168.1| probable hybrid sensory kinase [Chromobact... 74 5e-12
ref|ZP_01133430.1| putative sensor protein [Pseudoalteromon... 74 5e-12
gb|AAZ47621.1| Response regulator receiver:ATP-binding regi... 74 5e-12
dbj|BAC60139.1| hypothetical protein [Vibrio parahaemolytic... 73 6e-12
ref|ZP_00516150.1| Response regulator receiver:ATP-binding ... 73 6e-12
emb|CAG76469.1| two-component sensor kinase and response re... 73 6e-12
ref|ZP_00627039.1| PAS [Nitrobacter hamburgensis X14] >gi|6... 73 6e-12
gb|EAN27741.1| PAS [Magnetococcus sp. MC-1] >gi|69260064|re... 73 6e-12
gb|AAQ18202.1| hypothetical protein csv012 [uncultured bact... 73 6e-12
dbj|BAE51734.1| Sensor protein barA [Magnetospirillum magne... 73 8e-12
ref|NP_791516.1| sensor histidine kinase/response regulator... 73 8e-12
ref|ZP_00520847.1| Response regulator receiver:ATP-binding ... 73 8e-12
ref|ZP_00596596.1| PAS [Ralstonia metallidurans CH34] >gi|6... 73 8e-12
ref|ZP_00585950.1| PAS [Shewanella amazonensis SB2B] >gi|68... 73 8e-12
dbj|BAC95587.1| signal transduction histidine kinase [Vibri... 73 8e-12
ref|ZP_00504495.1| Response regulator receiver:ATP-binding ... 73 8e-12
emb|CAG21933.1| putative BaeS, Signal transduction histidin... 73 8e-12
ref|YP_392735.1| multi-sensor hybrid histidine kinase [Thio... 73 8e-12
gb|ABA88306.1| Hpt domain protein [Pelobacter carbinolicus ... 73 8e-12
ref|ZP_00586343.1| PAS [Shewanella amazonensis SB2B] >gi|68... 73 8e-12
gb|EAO24426.1| PAS [Syntrophomonas wolfei subsp. wolfei str... 73 8e-12
gb|EAN29681.1| PAS [Magnetococcus sp. MC-1] >gi|69256475|re... 72 1e-11
ref|YP_475076.1| sensory box histidine kinase/response regu... 72 1e-11
ref|ZP_00587277.1| PAS [Shewanella amazonensis SB2B] >gi|68... 72 1e-11
ref|ZP_00679041.1| PAS [Pelobacter propionicus DSM 2379] >g... 72 1e-11
ref|YP_432128.1| Signal transduction histidine kinase [Hahe... 72 1e-11
ref|ZP_01109020.1| putative sensor protein [Alteromonas mac... 72 1e-11
ref|ZP_00764596.1| COG0642: Signal transduction histidine k... 72 1e-11
ref|YP_444628.1| histidine kinase DhkJ [Salinibacter ruber ... 72 1e-11
ref|ZP_00055969.2| COG0642: Signal transduction histidine k... 72 1e-11
ref|ZP_00761865.1| COG0642: Signal transduction histidine k... 72 1e-11
ref|YP_435070.1| Signal transduction histidine kinase [Hahe... 72 1e-11
gb|ABA55850.1| para-aminobenzoate synthase [Vibrio sp. DAT722] 72 1e-11
gb|AAZ45693.1| Response regulator receiver:ATP-binding regi... 72 1e-11
gb|AAY92257.1| sensory box sensor histidine kinase/response... 72 1e-11
emb|CAI85820.1| sensor protein barA [Pseudoalteromonas halo... 72 1e-11
gb|AAR29884.1| putative histidine kinase HHK5p [Cochliobolu... 72 1e-11
gb|AAR29898.1| putative histidine kinase HHK19p [Cochliobol... 72 1e-11
ref|YP_413373.1| multi-sensor hybrid histidine kinase [Nitr... 72 1e-11
ref|ZP_00671136.1| PAS [Nitrosomonas eutropha C71] >gi|7148... 72 1e-11
gb|AAM41638.1| two-component system sensor protein [Xanthom... 72 1e-11
ref|YP_412251.1| multi-sensor hybrid histidine kinase [Nitr... 72 1e-11
gb|AAB53936.1| sensor/regulator protein RpfA 72 1e-11
ref|ZP_00583064.1| PAS [Shewanella baltica OS155] >gi|68518... 72 1e-11
gb|AAZ44999.1| Response regulator receiver:ATP-binding regi... 72 1e-11
ref|XP_964013.1| hypothetical protein [Neurospora crassa N1... 72 1e-11
ref|ZP_00317496.1| COG0642: Signal transduction histidine k... 72 2e-11
ref|YP_392932.1| histidine kinase [Thiomicrospira denitrifi... 72 2e-11
gb|AAZ48574.1| PAS [Dechloromonas aromatica RCB] >gi|719094... 72 2e-11
ref|YP_236768.1| Response regulator receiver:ATP-binding re... 72 2e-11
gb|AAZ34474.1| response regulator, sensor histidine kinase ... 72 2e-11
emb|CAD16788.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY... 72 2e-11
ref|ZP_01133903.1| sensory box sensor histidine kinase/resp... 72 2e-11
ref|ZP_00551653.1| IMP dehydrogenase/GMP reductase:Response... 72 2e-11
gb|AAM37343.1| two-component system sensor protein [Xanthom... 72 2e-11
emb|CAJ24348.1| two-component system sensor histidine kinas... 72 2e-11
pir||B41863 two-component regulatory protein lemA - Pseudom... 72 2e-11
gb|AAS97529.1| sensory box histidine kinase/response regula... 72 2e-11
gb|AAK22014.1| sensory box histidine kinase/response regula... 72 2e-11
sp|P48027|GACS_PSESY Sensor protein gacS >gi|151329|gb|AAA2... 72 2e-11
ref|ZP_00665369.1| PAS [Syntrophobacter fumaroxidans MPOB] ... 71 2e-11
gb|AAZ27751.1| sensory box histidine kinase/response regula... 71 2e-11
emb|CAI85210.1| putative sensor protein; similar to LuxQ in... 71 2e-11
ref|ZP_00674273.1| Guanylate cyclase:Response regulator rec... 71 2e-11
gb|AAG08367.1| probable two-component sensor [Pseudomonas a... 71 2e-11
ref|YP_201436.1| two-component system sensor protein [Xanth... 71 2e-11
dbj|BAE69394.1| two-component system sensor protein [Xantho... 71 2e-11
emb|CAE09370.1| HYBRID SENSORY HISTIDINE KINASE [Wolinella ... 71 2e-11
ref|YP_484035.1| periplasmic sensor hybrid histidine kinase... 71 2e-11
ref|ZP_00141454.2| COG0642: Signal transduction histidine k... 71 2e-11
ref|ZP_00971742.1| COG0642: Signal transduction histidine k... 71 2e-11
gb|AAZ48079.1| Response regulator receiver:ATP-binding regi... 71 2e-11
ref|ZP_00503636.1| Response regulator receiver:GAF:ATP-bind... 71 2e-11
ref|YP_431646.1| Signal transduction histidine kinase [Hahe... 71 2e-11
ref|ZP_01166609.1| histidine kinase response regulator hybr... 71 3e-11
ref|ZP_00600877.1| PAS [Rubrobacter xylanophilus DSM 9941] ... 71 3e-11
ref|ZP_01135898.1| hypothetical protein PTD2_09494 [Pseudoa... 71 3e-11
gb|AAZ44767.1| PAS [Dechloromonas aromatica RCB] >gi|719056... 71 3e-11
gb|AAM07719.1| sensory transduction histidine kinase [Metha... 71 3e-11
ref|ZP_00849255.1| PAS [Shewanella sp. ANA-3] >gi|78507803|... 71 3e-11
gb|AAR34661.1| sensory box sensor histidine kinase/response... 71 3e-11
gb|AAZ47541.1| PAS [Dechloromonas aromatica RCB] >gi|719084... 71 3e-11
ref|ZP_00952408.1| sensor histidine kinase/response regulat... 71 3e-11
dbj|BAC60830.1| sensor histidine kinase/response regulator ... 71 3e-11
dbj|BAC08834.1| two-component hybrid sensor and regulator [... 71 3e-11
ref|NP_902918.1| hypothetical protein CV3248 [Chromobacteri... 71 3e-11
ref|ZP_00966014.1| COG0642: Signal transduction histidine k... 71 3e-11
dbj|BAD81013.1| Sensor histidine kinase with a response reg... 71 3e-11
gb|AAV82565.1| Hybrid sensor histidine kinase (HisK, 2 CheY... 71 3e-11
ref|ZP_01064678.1| sensor histidine kinase/response regulat... 71 3e-11
ref|ZP_01019711.1| Response regulator receiver:ATP-binding ... 71 3e-11
ref|ZP_00601697.1| PAS [Rubrobacter xylanophilus DSM 9941] ... 71 3e-11
gb|EAN27061.1| PAS [Magnetococcus sp. MC-1] >gi|69261710|re... 70 4e-11
gb|ABB39565.1| multi-sensor hybrid histidine kinase [Desulf... 70 4e-11
ref|YP_434863.1| Signal transduction histidine kinase [Hahe... 70 4e-11
emb|CAE26999.1| sensor histidine kinase with multiple PAS/P... 70 4e-11
gb|AAW87142.1| sensor protein LuxQ [Vibrio fischeri ES114] ... 70 4e-11
gb|AAM39799.1| two-component system sensor protein [Xanthom... 70 4e-11
ref|ZP_00417465.1| Response regulator receiver:ATP-binding ... 70 4e-11
gb|AAL30826.1| two-component osmosensing histidine kinase B... 70 4e-11
gb|AAL37947.1| two-component osmosensing histidine-kinase [... 70 4e-11
gb|AAK24637.1| sensory box histidine kinase/response regula... 70 4e-11
ref|ZP_00831566.1| COG0642: Signal transduction histidine k... 70 4e-11
ref|ZP_00820883.1| COG0642: Signal transduction histidine k... 70 4e-11
gb|AAZ46362.1| PAS [Dechloromonas aromatica RCB] >gi|719072... 70 4e-11
emb|CAG23023.1| hypothetical protein [Photobacterium profun... 70 4e-11
emb|CAD78909.1| sensory transduction histidine kinase-putat... 70 4e-11
gb|AAS97533.1| sensor histidine kinase/response regulator [... 68 4e-11
gb|AAQ19476.1| histidine kinase J7 [Emericella nidulans] 70 5e-11
ref|ZP_00526365.1| PAS [Solibacter usitatus Ellin6076] >gi|... 70 5e-11
dbj|BAE49245.1| Signal transduction histidine kinase [Magne... 70 5e-11
dbj|BAE62834.1| unnamed protein product [Aspergillus oryzae] 70 5e-11
ref|ZP_01023574.1| Response regulator receiver:ATP-binding ... 70 5e-11
gb|AAS72211.1| histidine kinase sensor protein [Leptospira ... 70 5e-11
ref|ZP_00638792.1| PAS [Shewanella frigidimarina NCIMB 400]... 70 5e-11
dbj|BAE73783.1| two-component regulatory protein [Sodalis g... 70 5e-11
emb|CAE80156.1| unnamed protein product [Bdellovibrio bacte... 70 5e-11
gb|AAP80772.1| MmoS [Methylococcus capsulatus] 70 5e-11
gb|AAU92711.1| sensory box histidine kinase/response regula... 70 5e-11
ref|ZP_00533552.1| Response regulator receiver:ATP-binding ... 70 5e-11
ref|ZP_00761785.1| COG0642: Signal transduction histidine k... 70 5e-11
gb|AAN51800.1| two-component hybrid sensor and regulator [L... 70 5e-11
ref|ZP_00775436.1| Response regulator receiver:ATP-binding ... 70 5e-11
emb|CAI85186.1| putative sensor protein [Pseudoalteromonas ... 70 5e-11
gb|AAM35383.1| two-component system sensor protein [Xanthom... 70 5e-11
ref|XP_662083.1| hypothetical protein AN4479.2 [Aspergillus... 70 5e-11
dbj|BAE67237.1| two-component system sensor protein [Xantho... 70 5e-11
emb|CAJ22159.1| two-component system sensor protein [Xantho... 70 5e-11
ref|ZP_00678023.1| PAS [Pelobacter propionicus DSM 2379] >g... 70 5e-11
ref|ZP_00806419.1| Response regulator receiver:ATP-binding ... 70 5e-11
gb|AAK54094.2| histidine kinase DhkE [Dictyostelium discoid... 70 7e-11
ref|XP_645937.1| histidine kinase [Dictyostelium discoideum... 70 7e-11
dbj|BAE50645.1| hypothetical protein [Magnetospirillum magn... 70 7e-11
ref|ZP_00775653.1| PAS [Pseudoalteromonas atlantica T6c] >g... 70 7e-11
emb|CAA74020.1| sensory kinase [Pectobacterium carotovorum ... 70 7e-11
gb|AAW85791.1| sensor protein LuxQ [Vibrio fischeri ES114] ... 70 7e-11
gb|AAZ45177.1| PAS [Dechloromonas aromatica RCB] >gi|719060... 70 7e-11
gb|EAN70469.1| PAS [Shewanella denitrificans OS217] >gi|699... 70 7e-11
ref|ZP_00826632.1| COG0642: Signal transduction histidine k... 70 7e-11
gb|AAZ45765.1| Response regulator receiver:ATP-binding regi... 70 7e-11
gb|AAZ48549.1| Response regulator receiver:ATP-binding regi... 69 9e-11
ref|ZP_00766508.1| Response regulator receiver:ATP-binding ... 69 9e-11
gb|AAS96041.1| sensory box histidine kinase/response regula... 69 9e-11
ref|YP_316429.1| Periplasmic Sensor Hybrid Histidine Kinase... 69 9e-11
ref|ZP_01064220.1| hybrid sensory kinase [Vibrio sp. MED222... 69 9e-11
gb|AAN43820.2| sensor for ctr capsule biosynthesis, probabl... 69 9e-11
dbj|BAC59332.1| sensor histidine kinase [Vibrio parahaemoly... 69 9e-11
ref|ZP_00416780.1| Response regulator receiver:ATP-binding ... 69 9e-11
ref|ZP_00858773.1| PAS [Bradyrhizobium sp. BTAi1] >gi|78517... 69 9e-11
ref|XP_749489.1| two-component osmosensing histidine kinase... 69 1e-10
gb|AAZ48278.1| PAS [Dechloromonas aromatica RCB] >gi|719091... 69 1e-10
ref|YP_003100.1| histidine kinase response regulator hybrid... 69 1e-10
gb|EAO24717.1| PAS [Syntrophomonas wolfei subsp. wolfei str... 69 1e-10
ref|XP_721138.1| putative histidine kinase osmosensor [Cand... 69 1e-10
gb|AAC39451.1| histidine kinase 1; CaHK1 [Candida albicans] 69 1e-10
emb|CAE80630.1| sensor histidine kinase/response regulator ... 69 1e-10
ref|NP_743807.1| sensor histidine kinase/response regulator... 69 1e-10
gb|AAZ48443.1| PAS [Dechloromonas aromatica RCB] >gi|719093... 69 1e-10
gb|ABB23193.1| PAS/PAC sensor hybrid histidine kinase [Pelo... 69 1e-10
ref|ZP_00622171.1| PAS [Silicibacter sp. TM1040] >gi|691331... 69 1e-10
gb|EAQ85570.1| hypothetical protein CHGG_06823 [Chaetomium ... 69 1e-10
gb|AAN51193.1| two-component hybrid sensor and regulator [L... 69 1e-10
gb|AAD09491.1| histidine kinase FIK [Fusarium solani f. sp.... 69 1e-10
gb|AAZ47517.1| Response regulator receiver:ATP-binding regi... 69 1e-10
ref|YP_463125.1| signal transduction histidine kinase [Synt... 69 1e-10
gb|AAD40816.1| histidine kinase [Fusarium solani f. sp. pisi] 69 1e-10
ref|ZP_00991371.1| sensor histidine kinase/response regulat... 69 1e-10
ref|ZP_01127605.1| sensor histidine kinase/response regulat... 69 1e-10
dbj|BAC95028.1| signal transduction histidine kinase [Vibri... 69 2e-10
ref|ZP_01109674.1| sensory box histidine kinase/response re... 69 2e-10
ref|ZP_00524836.1| Response regulator receiver:GAF:ATP-bind... 69 2e-10
gb|EAQ92278.1| hypothetical protein CHGG_00513 [Chaetomium ... 69 2e-10
gb|AAS60579.1| two-component regulatory protein [Yersinia p... 69 2e-10
emb|CAC92611.1| two-component regulatory protein [Yersinia ... 69 2e-10
ref|ZP_00794314.1| COG0642: Signal transduction histidine k... 69 2e-10
ref|ZP_00672546.1| Guanylate cyclase:Response regulator rec... 69 2e-10
gb|EAQ93286.1| hypothetical protein CHGG_01521 [Chaetomium ... 69 2e-10
gb|AAM84395.1| sensor-regulator, activates OmpR by phophory... 69 2e-10
gb|AAK22708.1| sensor histidine kinase / response regulator... 69 2e-10
ref|ZP_00835021.1| COG0642: Signal transduction histidine k... 69 2e-10
ref|ZP_00659515.1| PAS [Nocardioides sp. JS614] >gi|7115521... 69 2e-10
gb|AAK54090.1| histidine kinase DhkI [Dictyostelium discoid... 69 2e-10
ref|XP_644590.1| histidine kinase DhkI [Dictyostelium disco... 69 2e-10
dbj|BAE55746.1| unnamed protein product [Aspergillus oryzae] 69 2e-10
ref|ZP_00796947.1| COG0642: Signal transduction histidine k... 69 2e-10
emb|CAH19990.1| bifunctional multimodular BarA: sensory his... 69 2e-10
gb|AAR34678.1| sensor histidine kinase/response regulator [... 69 2e-10
ref|XP_662900.1| hypothetical protein AN5296.2 [Aspergillus... 69 2e-10
gb|AAR30105.1| putative histidine kinase HHK5p [Botryotinia... 69 2e-10
gb|AAO10564.1| Sensor histidine kinase [Vibrio vulnificus C... 69 2e-10
ref|ZP_01165707.1| signal transduction histidine kinase [Oc... 69 2e-10
emb|CAI09580.1| putative sensory transduction histidine kin... 68 2e-10
gb|AAB03699.1| Nik-1 68 2e-10
gb|AAZ24849.1| sensor histidine kinase/response regulator [... 68 2e-10
ref|ZP_00758621.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00757152.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00748429.1| COG0642: Signal transduction histidine k... 68 2e-10
gb|AAF95595.1| sensor histidine kinase/response regulator [... 68 2e-10
gb|AAB03698.1| Nik-1 [Neurospora crassa] 68 2e-10
gb|AAB01979.1| Os-1p [Neurospora crassa] >gi|85113126|ref|X... 68 2e-10
dbj|BAE66347.1| unnamed protein product [Aspergillus oryzae] 68 2e-10
ref|ZP_01148339.1| PAS [Desulfotomaculum reducens MI-1] >gi... 68 2e-10
ref|ZP_00773511.1| PAS [Pseudoalteromonas atlantica T6c] >g... 68 2e-10
dbj|BAB36530.1| sensor for ctr capsule biosynthesis [Escher... 68 2e-10
gb|AAA24505.1| putative 68 2e-10
gb|AAA24503.1| capsule synthesis regulator component C 68 2e-10
gb|AAC75278.1| hybrid sensory kinase in two-component regul... 68 2e-10
ref|YP_311159.1| sensor for ctr capsule biosynthesis [Shige... 68 2e-10
ref|YP_402525.1| sensor for ctr capsule biosynthesis [Shige... 68 2e-10
ref|YP_408495.1| sensor for ctr capsule biosynthesis [Shige... 68 2e-10
ref|ZP_00736696.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00726740.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00706331.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00700281.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00696309.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00926828.1| COG0642: Signal transduction histidine k... 68 2e-10
gb|AAP17637.1| sensor for ctr capsule biosynthesis, probabl... 68 2e-10
gb|AAN81215.1| Sensor protein rcsC [Escherichia coli CFT073... 68 2e-10
sp|P14376|RCSC_ECOLI Sensor kinase protein rcsC (Capsular s... 68 2e-10
ref|ZP_00805204.1| Response regulator receiver:ATP-binding ... 68 2e-10
ref|ZP_00751676.1| COG0642: Signal transduction histidine k... 68 2e-10
gb|AAZ48188.1| Response regulator receiver:ATP-binding regi... 68 2e-10
gb|AAW86577.1| sensor protein BarA [Vibrio fischeri ES114] ... 68 2e-10
dbj|BAA16014.1| hybrid sensory kinase in two-component regu... 68 2e-10
gb|AAB71342.1| two component sensor regulator; ORF2 [Pseudo... 68 2e-10
ref|ZP_00978459.1| COG0642: Signal transduction histidine k... 68 2e-10
ref|ZP_00761598.1| COG0642: Signal transduction histidine k... 68 2e-10
emb|CAD77067.1| probable sensor/response regulator hybrid [... 68 2e-10
dbj|BAC45924.1| two-component hybrid sensor and regulator [... 68 2e-10
ref|ZP_01035681.1| Hypothetical sensor protein TorS [Roseov... 68 2e-10
dbj|BAB49529.1| probable sensory histidine kinase [Mesorhiz... 68 3e-10
gb|EAN27618.1| Response regulator receiver:ATP-binding regi... 68 3e-10
gb|EAN29105.1| Response regulator receiver:ATP-binding regi... 68 3e-10
dbj|BAB73978.1| two-component hybrid sensor and regulator [... 68 3e-10
emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomona... 68 3e-10
ref|ZP_00422438.1| Response regulator receiver:ATP-binding ... 68 3e-10
ref|XP_380913.1| hypothetical protein FG00737.1 [Gibberella... 68 3e-10
ref|YP_432114.1| FOG: PAS/PAC domain [Hahella chejuensis KC... 68 3e-10
gb|ABB37058.1| histidine kinase [Desulfovibrio desulfurican... 68 3e-10
gb|AAZ44982.1| PAS [Dechloromonas aromatica RCB] >gi|719058... 68 3e-10
ref|ZP_00984284.1| COG0642: Signal transduction histidine k... 68 3e-10
gb|AAZ45217.1| Response regulator receiver:ATP-binding regi... 68 3e-10
ref|ZP_01157575.1| two-component hybrid sensor and regulato... 68 3e-10
ref|ZP_00561779.1| ATP-binding region, ATPase-like [Methano... 68 3e-10
ref|ZP_00595391.1| Response regulator receiver:ATP-binding ... 68 3e-10
ref|XP_754366.1| sensor histidine kinase/response regulator... 68 3e-10
gb|AAM90591.1| protein kinase PpoS [Marinomonas mediterranea] 67 3e-10
gb|ABB38494.1| periplasmic sensor hybrid histidine kinase [... 67 3e-10
emb|CAA86131.1| sln1 [Saccharomyces cerevisiae] >gi|6322044... 67 3e-10
gb|AAK31604.1| RtpA-like protein [Pseudomonas synxantha] 67 3e-10
dbj|BAB73582.1| two-component hybrid sensor and regulator [... 67 3e-10
ref|YP_217261.1| sensory histidine kinase in two-component ... 67 3e-10
gb|AAV76595.1| sensor protein RcsC [Salmonella enterica sub... 67 3e-10
emb|CAD07502.1| sensor protein RcsC [Salmonella enterica su... 67 3e-10
gb|AAL21172.1| sensory histidine kinase in two-component re... 67 3e-10
ref|ZP_00978453.1| COG0642: Signal transduction histidine k... 67 3e-10
gb|EAN27174.1| PAS [Magnetococcus sp. MC-1] >gi|69261454|re... 67 3e-10
gb|EAN29169.1| PAS [Magnetococcus sp. MC-1] >gi|69257114|re... 67 3e-10
ref|ZP_01132264.1| putative signal transduction histidine k... 67 3e-10
ref|ZP_00746024.1| COG0642: Signal transduction histidine k... 67 3e-10
ref|ZP_00107058.1| COG0784: FOG: CheY-like receiver [Nostoc... 67 3e-10
ref|ZP_01131856.1| Signal transduction histidine kinase [Ps... 67 3e-10
gb|AAW42353.1| protein-histidine kinase, putative [Cryptoco... 67 3e-10
gb|EAL22249.1| hypothetical protein CNBC3870 [Cryptococcus ... 67 3e-10
dbj|BAB73078.1| two-component hybrid sensor and regulator [... 67 3e-10
ref|ZP_01064843.1| sensor histidine kinase [Vibrio sp. MED2... 67 3e-10
ref|ZP_00835929.1| PAS [Shewanella sp. PV-4] >gi|78362180|g... 67 3e-10
ref|ZP_00550285.1| Histidine kinase [Desulfuromonas acetoxi... 67 3e-10
ref|ZP_00753694.1| COG0642: Signal transduction histidine k... 67 3e-10
gb|ABA24293.1| GAF Sensor Hybrid Histidine Kinase [Anabaena... 67 3e-10
dbj|BAC60018.1| putative histidine kinase [Vibrio parahaemo... 67 3e-10
ref|ZP_01152427.1| PAS [Halorhodospira halophila SL1] >gi|8... 67 3e-10
gb|AAZ46568.1| Response regulator receiver:ATP-binding regi... 67 3e-10
gb|AAK24816.1| sensory box histidine kinase/response regula... 67 3e-10
gb|EAN29969.1| PAS [Magnetococcus sp. MC-1] >gi|69255521|re... 67 4e-10
emb|CAI86226.1| putative two-component member protein [Pseu... 67 4e-10
gb|AAF94507.1| sensory box sensor histidine kinase/response... 67 4e-10
ref|ZP_00756257.1| COG0642: Signal transduction histidine k... 67 4e-10
ref|ZP_00756171.1| COG0642: Signal transduction histidine k... 67 4e-10
ref|ZP_00753663.1| COG0642: Signal transduction histidine k... 67 4e-10
gb|AAZ47664.1| PAS [Dechloromonas aromatica RCB] >gi|719085... 67 4e-10
dbj|BAA34717.1| sensor kinase rtpA [Pseudomonas tolaasii] 67 4e-10
gb|EAQ86652.1| hypothetical protein CHGG_07905 [Chaetomium ... 67 4e-10
ref|ZP_00640879.1| Response regulator receiver:ATP-binding ... 67 4e-10
ref|ZP_01074551.1| Multi-sensor Hybrid Histidine Kinase [Ma... 67 4e-10
ref|ZP_01017391.1| sensory box histidine kinase/response re... 67 4e-10
ref|ZP_01091085.1| Response regulator receiver:ATP-binding ... 67 4e-10
ref|YP_001994.1| histidine kinase response regulator hybrid... 67 4e-10
ref|NP_902313.1| probable sensor/response regulator hybrid ... 67 4e-10
emb|CAB89845.1| fused two-component sensor-regulator protei... 67 4e-10
gb|AAM41145.1| RpfC protein [Xanthomonas campestris pv. cam... 67 4e-10
ref|ZP_01113539.1| sensor/response regulator hybrid [Reinek... 67 4e-10
gb|ABB39723.1| histidine kinase [Desulfovibrio desulfurican... 67 4e-10
gb|AAM18622.1| GacS-like sensor kinase protein [Acinetobact... 67 4e-10
ref|ZP_00836597.1| PAS [Shewanella sp. PV-4] >gi|78361632|g... 67 4e-10
ref|ZP_00750537.1| COG0642: Signal transduction histidine k... 67 4e-10
gb|EAN26985.1| PAS [Magnetococcus sp. MC-1] >gi|69261910|re... 67 4e-10
ref|ZP_00908722.1| PAS [Clostridium beijerincki NCIMB 8052]... 67 4e-10
ref|ZP_00660842.1| PAS [Prosthecochloris vibrioformis DSM 2... 67 4e-10
gb|AAF94602.1| sensor histidine kinase/response regulator [... 67 4e-10
ref|ZP_00776355.1| Response regulator receiver:ATP-binding ... 67 4e-10
ref|ZP_00750039.1| COG0642: Signal transduction histidine k... 67 4e-10
gb|AAR29880.1| putative histidine kinase HHK1p [Cochliobolu... 67 4e-10
gb|AAA82924.1| regulator of multiple functions 67 4e-10
sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC 67 4e-10
sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC 67 4e-10
ref|ZP_00907239.1| Response regulator receiver:ATP-binding ... 67 4e-10
ref|ZP_00745934.1| COG0642: Signal transduction histidine k... 67 4e-10
dbj|BAD07401.1| histidine kinase [Cochliobolus heterostrophus] 67 4e-10
ref|ZP_00563674.1| ATP-binding region, ATPase-like [Methano... 67 4e-10
gb|AAO10642.1| Probable sensor/response regulator hybrid [V... 67 4e-10
dbj|BAC94845.1| conserved hypothetical protein [Vibrio vuln... 67 4e-10
gb|AAZ48600.1| PAS [Dechloromonas aromatica RCB] >gi|719094... 67 4e-10
ref|NP_901291.1| probable sensor/response regulatory hybrid... 67 4e-10
gb|AAN48944.1| two-component hybrid sensor and regulator [L... 67 4e-10
ref|ZP_01093572.1| sensor histidine kinase/response regulat... 67 4e-10
gb|AAW86633.1| two-component sensor histidine kinase [Vibri... 67 6e-10
ref|ZP_00775529.1| Response regulator receiver:ATP-binding ... 67 6e-10
dbj|BAC60741.1| sensory box sensor histidine kinase/respons... 67 6e-10
ref|ZP_00859540.1| Response regulator receiver:GAF:ATP-bind... 67 6e-10
emb|CAE13203.1| Sensor protein BarA [Photorhabdus luminesce... 67 6e-10
emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Woli... 67 6e-10
ref|ZP_01074274.1| serine/threonine kinase with two-compone... 67 6e-10
gb|AAR99466.1| two component histidine kinase 1 [Leptosphae... 67 6e-10
gb|AAO10091.1| Sensory box sensor histidine kinase/response... 67 6e-10
dbj|BAC95497.1| sensory box sensor histidine kinase/respons... 67 6e-10
ref|YP_472882.1| probable two-component sensor histidine ki... 67 6e-10
ref|NP_973100.1| sensor histidine kinase/response regulator... 67 6e-10
gb|AAM06772.1| sensory transduction histidine kinase [Metha... 67 6e-10
ref|ZP_00474200.1| Response regulator receiver:ATP-binding ... 67 6e-10
gb|AAF93788.1| sensory box sensor histidine kinase/response... 67 6e-10
ref|ZP_00908717.1| PAS [Clostridium beijerincki NCIMB 8052]... 67 6e-10
gb|ABA21187.1| Multi-sensor Hybrid Histidine Kinase [Anabae... 67 6e-10
dbj|BAB75460.1| two-component hybrid sensor and regulator [... 67 6e-10
>dbj|BAD01584.1| histidine kinase 2 [Zea mays]
Length = 1007
Score = 324 bits (831), Expect = 1e-87
Identities = 166/192 (86%), Positives = 170/192 (88%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEEIM LE ETG Q NTLSGYPVANRKRSWENF
Sbjct: 541 QIITNLVGNSIKFTEKGHIYLTVHVVEEIMHCLEVETGIQYTNTLSGYPVANRKRSWENF 600
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+FSRELNSSEMPFAPIASDSISL+ISVEDTG GIPFDAQSRVFTPFMQVGPSIARIHGG
Sbjct: 601 RLFSRELNSSEMPFAPIASDSISLMISVEDTGAGIPFDAQSRVFTPFMQVGPSIARIHGG 660
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKPQVGSTFTFTAVLTR HSSRNENKSSEFK INALVV
Sbjct: 661 TGIGLSISKCLVGLMKGEIGFASKPQVGSTFTFTAVLTRVHSSRNENKSSEFKEINALVV 720
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 721 DHRPVRAKVTKY 732
>gb|ABB76249.1| hybrid type histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 1023
Score = 302 bits (773), Expect = 6e-81
Identities = 153/192 (79%), Positives = 165/192 (85%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+RSWE+
Sbjct: 557 QIITNLIGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRRSWESI 616
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 617 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 676
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKP VGSTFTFTAVL RAH N+ KSSEFKGINALVV
Sbjct: 677 TGIGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVV 736
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 737 DHRPVRAKVTKY 748
>gb|AAO59548.1| histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 488
Score = 302 bits (773), Expect = 6e-81
Identities = 153/192 (79%), Positives = 165/192 (85%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+RSWE+
Sbjct: 22 QIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRRSWESI 81
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 82 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 141
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKP VGSTFTFTAVL RAH N+ KSSEFKGINALVV
Sbjct: 142 TGIGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVV 201
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 202 DHRPVRAKVTKY 213
>gb|AAO59549.1| histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 497
Score = 302 bits (773), Expect = 6e-81
Identities = 153/192 (79%), Positives = 165/192 (85%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+RSWE+
Sbjct: 31 QIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRRSWESI 90
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 91 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 150
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKP VGSTFTFTAVL RAH N+ KSSEFKGINALVV
Sbjct: 151 TGIGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVV 210
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 211 DHRPVRAKVTKY 222
>ref|XP_463649.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
Length = 1023
Score = 299 bits (765), Expect = 5e-80
Identities = 152/192 (79%), Positives = 164/192 (85%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+ SWE+
Sbjct: 557 QIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRCSWESI 616
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 617 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 676
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKP VGSTFTFTAVL RAH N+ KSSEFKGINALVV
Sbjct: 677 TGIGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVV 736
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 737 DHRPVRAKVTKY 748
>dbj|BAD88327.1| putative histidine kinase 2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD88305.1| putative histidine kinase 2 [Oryza sativa (japonica
cultivar-group)]
Length = 866
Score = 299 bits (765), Expect = 5e-80
Identities = 152/192 (79%), Positives = 164/192 (85%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+ SWE+
Sbjct: 400 QIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRCSWESI 459
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 460 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 519
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TGIGLSISKCLVGLM+GEIGFASKP VGSTFTFTAVL RAH N+ KSSEFKGINALVV
Sbjct: 520 TGIGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVV 579
Query: 52 DHRPVRAKVTRY 17
DHRPVRAKVT+Y
Sbjct: 580 DHRPVRAKVTKY 591
>ref|NP_564276.1| AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Arabidopsis thaliana]
dbj|BAB40775.1| histidine kinase [Arabidopsis thaliana]
Length = 1036
Score = 219 bits (557), Expect = 7e-56
Identities = 115/198 (58%), Positives = 143/198 (72%), Gaps = 6/198 (3%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HI+ TVH+V+E+ ++ ET + +TLSG PVA+R+RSWENF
Sbjct: 569 QILTNLMGNSIKFTEKGHIFVTVHLVDELFESIDGETASSPESTLSGLPVADRQRSWENF 628
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
+ FS + S P P I+LI+SVEDTGVGIP +AQSR+FTPFMQVGPSI+R HGG
Sbjct: 629 KAFSSNGHRSFEPSPP----DINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGG 684
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLT---RAHSSRNENKS---SEFKG 71
TGIGLSISKCLVGLM+GEIGF+S P+VGSTFTFTAV + + +N+N SEF+G
Sbjct: 685 TGIGLSISKCLVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQPAERKNDNNQPIFSEFRG 744
Query: 70 INALVVDHRPVRAKVTRY 17
+ A+VVDHRP RAKV+ Y
Sbjct: 745 MKAVVVDHRPARAKVSWY 762
>gb|AAF99730.1| F17L21.11 [Arabidopsis thaliana]
Length = 1092
Score = 219 bits (557), Expect = 7e-56
Identities = 115/198 (58%), Positives = 143/198 (72%), Gaps = 6/198 (3%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HI+ TVH+V+E+ ++ ET + +TLSG PVA+R+RSWENF
Sbjct: 601 QILTNLMGNSIKFTEKGHIFVTVHLVDELFESIDGETASSPESTLSGLPVADRQRSWENF 660
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
+ FS + S P P I+LI+SVEDTGVGIP +AQSR+FTPFMQVGPSI+R HGG
Sbjct: 661 KAFSSNGHRSFEPSPP----DINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGG 716
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLT---RAHSSRNENKS---SEFKG 71
TGIGLSISKCLVGLM+GEIGF+S P+VGSTFTFTAV + + +N+N SEF+G
Sbjct: 717 TGIGLSISKCLVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQPAERKNDNNQPIFSEFRG 776
Query: 70 INALVVDHRPVRAKVTRY 17
+ A+VVDHRP RAKV+ Y
Sbjct: 777 MKAVVVDHRPARAKVSWY 794
>emb|CAD24778.1| histidine kinase-like protein [Oryza sativa]
Length = 182
Score = 200 bits (509), Expect = 3e-50
Identities = 101/133 (75%), Positives = 110/133 (82%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQSANTLSGYPVANRKRSWENF 413
QI S TE HIY TVHVVEE+M LE ETG Q+ NTLSGYPVANR+ SWE+
Sbjct: 50 QIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRCSWESI 109
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+F+REL+SSE FAPIASDSISL+ISVEDTGVGIPF+AQSRVFTPFMQVGPSIARIHGG
Sbjct: 110 RLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGG 169
Query: 232 TGIGLSISKCLVG 194
TGIGLSI KCLVG
Sbjct: 170 TGIGLSIXKCLVG 182
>dbj|BAE80689.1| histidine kinase [Zea mays]
Length = 996
Score = 177 bits (449), Expect = 2e-43
Identities = 103/218 (47%), Positives = 134/218 (61%), Gaps = 26/218 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHV-----------VEEIMXXLEXETGTQSA------- 467
QI S TE HI+ VH+ VE + + T ++A
Sbjct: 502 QIITNLVGNSIKFTERGHIFVQVHLADHSNLATESKVEPVANGMNGHTNEKTAVATSVSL 561
Query: 466 NTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSR 287
NTLSG+ A+ + SWENF++ SEMP+ + SD ++L++SVEDTG+GIP DAQ++
Sbjct: 562 NTLSGFEAADSRNSWENFKLLL-SYEKSEMPYESV-SDKVTLVVSVEDTGIGIPLDAQAK 619
Query: 286 VFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRA-H 110
VFTPFMQ S +R +GGTGIGLSISKCLV LM G+I F S+P VGSTFTFTAVL R
Sbjct: 620 VFTPFMQADSSTSRTYGGTGIGLSISKCLVELMGGQINFVSRPHVGSTFTFTAVLKRCDR 679
Query: 109 SSRNENK-------SSEFKGINALVVDHRPVRAKVTRY 17
S+ ++K S FKG++AL+VD RPVRA VT+Y
Sbjct: 680 SAIGDSKPVMLHPLPSSFKGLSALLVDRRPVRATVTKY 717
>dbj|BAE80688.1| histidine kinase [Zea mays]
Length = 995
Score = 172 bits (436), Expect = 7e-42
Identities = 99/218 (45%), Positives = 130/218 (59%), Gaps = 26/218 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQ------------------SA 467
QI S TE HI+ VH+ + E + + S
Sbjct: 502 QIITNLVGNSIKFTERGHIFVQVHLADHSNLATESKVESVANGMNGHKDEKTAVATSVSL 561
Query: 466 NTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSR 287
NTLSG+ A+ + SWENF++ +EMP+ + SD ++L++SVEDTG+GIP DAQ++
Sbjct: 562 NTLSGFEAADSRNSWENFKLLL-SYEKNEMPYESV-SDKVTLVVSVEDTGIGIPLDAQAK 619
Query: 286 VFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRA-H 110
VFTPFMQ S +R +GGTGIGLSISKCLV LM G+I F S+P VGSTFTFTA L R
Sbjct: 620 VFTPFMQADSSTSRTYGGTGIGLSISKCLVELMGGQINFVSRPHVGSTFTFTAALQRCDR 679
Query: 109 SSRNENK-------SSEFKGINALVVDHRPVRAKVTRY 17
S+ ++K S FKG++AL+VD RPVRA VT+Y
Sbjct: 680 SAIGDSKPVMLHPLPSSFKGLSALLVDRRPVRATVTKY 717
>dbj|BAE80687.1| histidine kinase [Zea mays]
Length = 995
Score = 172 bits (436), Expect = 7e-42
Identities = 100/218 (45%), Positives = 132/218 (60%), Gaps = 26/218 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHV-----------VEEIMXXLEXETGTQSA------- 467
QI S TE HI+ VH+ VE + + ++A
Sbjct: 502 QIITNLVGNSIKFTERGHIFVQVHLADHSNLATEPKVESVANGMNGHKDEKTAVATSVSL 561
Query: 466 NTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSR 287
NTLSG+ A+ + SWENF++ +EMP+ + SD ++L++SVEDTG+GIP DAQ++
Sbjct: 562 NTLSGFEAADSRNSWENFKLLL-SYEKNEMPYESV-SDKVTLVVSVEDTGIGIPLDAQAK 619
Query: 286 VFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRA-H 110
VFTPFMQ S +R +GGTGIGLSISKCLV LM G+I F S+P VGSTFTFTA L R
Sbjct: 620 VFTPFMQADSSTSRTYGGTGIGLSISKCLVELMGGQINFVSRPHVGSTFTFTAALQRCDR 679
Query: 109 SSRNENK-------SSEFKGINALVVDHRPVRAKVTRY 17
S+ ++K S FKG++AL+VD RPVRA VT+Y
Sbjct: 680 SAIGDSKPVMLHPLPSSFKGLSALLVDRRPVRATVTKY 717
>ref|XP_469566.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAO38834.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
Length = 1013
Score = 164 bits (414), Expect = 3e-39
Identities = 94/205 (45%), Positives = 126/205 (61%), Gaps = 26/205 (12%)
Frame = -2
Query: 553 TEXXHIYXTVHVVEEIMXXLEXETG------------------TQSANTLSGYPVANRKR 428
TE HI+ VH+ + E + + S NTLSG+ A+ +
Sbjct: 522 TERGHIFVQVHLADHSNLATEAKIEPVVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRN 581
Query: 427 SWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIA 248
+WENF++ +EMP+ SD ++L++SVEDTG+GIP AQ RVFTPFMQ S +
Sbjct: 582 NWENFKLLL-SYEKNEMPYES-DSDKVTLVVSVEDTGIGIPLHAQGRVFTPFMQADSSTS 639
Query: 247 RIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSR-NENKS----- 86
R +GGTGIGLSISKCLV +M G+I F S+P VGSTFTFTAVL R + +++K+
Sbjct: 640 RNYGGTGIGLSISKCLVEIMGGQINFVSRPLVGSTFTFTAVLRRCDKNAISDSKTVALHP 699
Query: 85 --SEFKGINALVVDHRPVRAKVTRY 17
S FKG++AL+VD RPVRA VT+Y
Sbjct: 700 LPSSFKGLSALLVDKRPVRATVTKY 724
>gb|AAP37766.1| At5g35750 [Arabidopsis thaliana]
gb|AAO00890.1| histidine kinase-like protein [Arabidopsis thaliana]
Length = 652
Score = 160 bits (404), Expect = 4e-38
Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 18/196 (9%)
Frame = -2
Query: 550 EXXHIYXTVHVVEEIMXXLEXETG----------TQSANTLSGYPVANRKRSWENFRV-F 404
E HI+ +VH+ +E+ L E ++S T+SG+P N SW+NF+ +
Sbjct: 197 ERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKTCY 256
Query: 403 SRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGI 224
S E +S D I L+++VEDTGVGIP DAQ R+FTPFMQ S +R +GGTGI
Sbjct: 257 STESQNS---------DQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGI 307
Query: 223 GLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENK-------SSEFKGIN 65
GLSISK LV LM+GE+GF S+P +GSTF+FT V +A ++ + K EF G+
Sbjct: 308 GLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSITKLERFDLAIQEFTGLR 367
Query: 64 ALVVDHRPVRAKVTRY 17
ALV+D+R +RA+VTRY
Sbjct: 368 ALVIDNRNIRAEVTRY 383
>ref|NP_568532.1| AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) [Arabidopsis thaliana]
dbj|BAB40774.1| histidine kinase [Arabidopsis thaliana]
Length = 1176
Score = 160 bits (404), Expect = 4e-38
Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 18/196 (9%)
Frame = -2
Query: 550 EXXHIYXTVHVVEEIMXXLEXETG----------TQSANTLSGYPVANRKRSWENFRV-F 404
E HI+ +VH+ +E+ L E ++S T+SG+P N SW+NF+ +
Sbjct: 721 ERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKTCY 780
Query: 403 SRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGI 224
S E +S D I L+++VEDTGVGIP DAQ R+FTPFMQ S +R +GGTGI
Sbjct: 781 STESQNS---------DQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGI 831
Query: 223 GLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENK-------SSEFKGIN 65
GLSISK LV LM+GE+GF S+P +GSTF+FT V +A ++ + K EF G+
Sbjct: 832 GLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSITKLERFDLAIQEFTGLR 891
Query: 64 ALVVDHRPVRAKVTRY 17
ALV+D+R +RA+VTRY
Sbjct: 892 ALVIDNRNIRAEVTRY 907
>dbj|BAB09274.1| histidine kinase-like protein [Arabidopsis thaliana]
Length = 1173
Score = 160 bits (404), Expect = 4e-38
Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 18/196 (9%)
Frame = -2
Query: 550 EXXHIYXTVHVVEEIMXXLEXETG----------TQSANTLSGYPVANRKRSWENFRV-F 404
E HI+ +VH+ +E+ L E ++S T+SG+P N SW+NF+ +
Sbjct: 718 ERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKTCY 777
Query: 403 SRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGI 224
S E +S D I L+++VEDTGVGIP DAQ R+FTPFMQ S +R +GGTGI
Sbjct: 778 STESQNS---------DQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGI 828
Query: 223 GLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENK-------SSEFKGIN 65
GLSISK LV LM+GE+GF S+P +GSTF+FT V +A ++ + K EF G+
Sbjct: 829 GLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSITKLERFDLAIQEFTGLR 888
Query: 64 ALVVDHRPVRAKVTRY 17
ALV+D+R +RA+VTRY
Sbjct: 889 ALVIDNRNIRAEVTRY 904
>gb|AAM14700.1| cytokinin receptor [Catharanthus roseus]
Length = 1041
Score = 158 bits (399), Expect = 1e-37
Identities = 92/195 (47%), Positives = 120/195 (61%), Gaps = 20/195 (10%)
Frame = -2
Query: 541 HIYXTVHVVEEIMXXLEX-------------ETGTQSANTLSGYPVANRKRSWENFRVFS 401
HI+ +VH+ +E+ L+ + T S NTLSG+PV +R RSWE F+
Sbjct: 576 HIFVSVHLADEVKSPLDIKDEVLKQSLTLIQDRSTASFNTLSGFPVVDRWRSWEKFK--- 632
Query: 400 RELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIG 221
N S MP S I L+++VEDTG GI +DAQ R+FTPF+Q S +R +GGTGIG
Sbjct: 633 ---NLSGMPEE---SKKIKLLVTVEDTGDGIVYDAQDRIFTPFVQADSSTSRKYGGTGIG 686
Query: 220 LSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENK-------SSEFKGINA 62
LSISK LV L+ GEIGF S+P GSTF+FTA T+A + K SEF+G+ A
Sbjct: 687 LSISKRLVDLVGGEIGFVSEPGTGSTFSFTAAFTKAETITGITKWEQYDLAVSEFRGLKA 746
Query: 61 LVVDHRPVRAKVTRY 17
LVVD + +RA+VTRY
Sbjct: 747 LVVDEKSIRAEVTRY 761
>ref|NP_849925.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
dbj|BAB40776.1| histidine kinase [Arabidopsis thaliana]
Length = 1080
Score = 157 bits (398), Expect = 2e-37
Identities = 97/216 (44%), Positives = 125/216 (57%), Gaps = 24/216 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQ--------------SANTLS 455
QI S TE HI+ VH+ E+ E + S NTLS
Sbjct: 591 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLS 650
Query: 454 GYPVANRKRSWENFR-VFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFT 278
GY A+ + SW++F+ + S E + SE S ++ L++S+EDTG+GIP AQ RVF
Sbjct: 651 GYEAADGRNSWDSFKHLVSEEQSLSEFDI----SSNVRLMVSIEDTGIGIPLVAQGRVFM 706
Query: 277 PFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAH--SS 104
PFMQ S +R +GGTGIGLSISKCLV LMRG+I F S+P +GSTF FTAVL + S+
Sbjct: 707 PFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSA 766
Query: 103 RN-------ENKSSEFKGINALVVDHRPVRAKVTRY 17
N E+ S FKG+ A+VVD +PVRA VTRY
Sbjct: 767 INHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRY 802
>dbj|BAB33311.1| cytokinin receptor CRE1b [Arabidopsis thaliana]
Length = 1080
Score = 157 bits (398), Expect = 2e-37
Identities = 97/216 (44%), Positives = 125/216 (57%), Gaps = 24/216 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQ--------------SANTLS 455
QI S TE HI+ VH+ E+ E + S NTLS
Sbjct: 591 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLS 650
Query: 454 GYPVANRKRSWENFR-VFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFT 278
GY A+ + SW++F+ + S E + SE S ++ L++S+EDTG+GIP AQ RVF
Sbjct: 651 GYEAADGRNSWDSFKHLVSEEQSLSEFDI----SSNVRLMVSIEDTGIGIPLVAQGRVFM 706
Query: 277 PFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAH--SS 104
PFMQ S +R +GGTGIGLSISKCLV LMRG+I F S+P +GSTF FTAVL + S+
Sbjct: 707 PFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSA 766
Query: 103 RN-------ENKSSEFKGINALVVDHRPVRAKVTRY 17
N E+ S FKG+ A+VVD +PVRA VTRY
Sbjct: 767 INHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRY 802
>ref|NP_565277.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
ref|NP_973396.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
emb|CAC18523.1| putative histidine kinase receptor [Arabidopsis thaliana]
emb|CAC18522.1| putative histidine kinase receptor [Arabidopsis thaliana]
emb|CAC18521.1| putative histidine kinase receptor [Arabidopsis thaliana]
gb|AAD21777.2| putative histidine kinase [Arabidopsis thaliana]
gb|ABB83397.1| AtCRE1a [Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP]
gb|ABB83393.1| AtCRE1a [Receiver Vector p415-CYC1-CRE1a-SSRE-GFP]
Length = 1057
Score = 157 bits (398), Expect = 2e-37
Identities = 97/216 (44%), Positives = 125/216 (57%), Gaps = 24/216 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQ--------------SANTLS 455
QI S TE HI+ VH+ E+ E + S NTLS
Sbjct: 568 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLS 627
Query: 454 GYPVANRKRSWENFR-VFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFT 278
GY A+ + SW++F+ + S E + SE S ++ L++S+EDTG+GIP AQ RVF
Sbjct: 628 GYEAADGRNSWDSFKHLVSEEQSLSEFDI----SSNVRLMVSIEDTGIGIPLVAQGRVFM 683
Query: 277 PFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAH--SS 104
PFMQ S +R +GGTGIGLSISKCLV LMRG+I F S+P +GSTF FTAVL + S+
Sbjct: 684 PFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSA 743
Query: 103 RN-------ENKSSEFKGINALVVDHRPVRAKVTRY 17
N E+ S FKG+ A+VVD +PVRA VTRY
Sbjct: 744 INHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRY 779
>dbj|BAB33310.1| cytokinin receptor CRE1a [Arabidopsis thaliana]
Length = 1057
Score = 157 bits (398), Expect = 2e-37
Identities = 97/216 (44%), Positives = 125/216 (57%), Gaps = 24/216 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETGTQ--------------SANTLS 455
QI S TE HI+ VH+ E+ E + S NTLS
Sbjct: 568 QIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLS 627
Query: 454 GYPVANRKRSWENFR-VFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFT 278
GY A+ + SW++F+ + S E + SE S ++ L++S+EDTG+GIP AQ RVF
Sbjct: 628 GYEAADGRNSWDSFKHLVSEEQSLSEFDI----SSNVRLMVSIEDTGIGIPLVAQGRVFM 683
Query: 277 PFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAH--SS 104
PFMQ S +R +GGTGIGLSISKCLV LMRG+I F S+P +GSTF FTAVL + S+
Sbjct: 684 PFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSA 743
Query: 103 RN-------ENKSSEFKGINALVVDHRPVRAKVTRY 17
N E+ S FKG+ A+VVD +PVRA VTRY
Sbjct: 744 INHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRY 779
>ref|NP_921024.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAM18726.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAP53311.1| histidine kinase, putative [Oryza sativa (japonica cultivar-group)]
Length = 925
Score = 153 bits (386), Expect = 5e-36
Identities = 93/213 (43%), Positives = 123/213 (57%), Gaps = 21/213 (9%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEX--------------ETGTQSANTLS 455
QI S TE HI+ VH++EE+ +E T NTLS
Sbjct: 454 QIITNLVGNSMKFTEQGHIFIRVHLIEEVKRKMEALDDTSPENIEVTANSKNTMPYNTLS 513
Query: 454 GYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTP 275
G VAN +++ E+FR+F +SS+ A DS++L+++VEDTG+GI DAQ+R+FTP
Sbjct: 514 GLEVANNRKTLESFRMFK---DSSD------AIDSVNLLVTVEDTGIGITKDAQTRIFTP 564
Query: 274 FMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNE 95
FMQ S +R +GGTGIGLSI+K LV LM GEIGF SKP V STF+FTA+ +
Sbjct: 565 FMQADGSTSRTYGGTGIGLSITKRLVELMGGEIGFVSKPGVSSTFSFTAIFKENRKDPGD 624
Query: 94 NK-------SSEFKGINALVVDHRPVRAKVTRY 17
K +F+G+ ALVVD R RA+VT Y
Sbjct: 625 IKRYCPEPTPPDFQGMRALVVDGRCARAEVTMY 657
>gb|AAK13126.1| Histidine-kinase like protein [Oryza sativa (japonica
cultivar-group)]
Length = 627
Score = 153 bits (386), Expect = 5e-36
Identities = 93/213 (43%), Positives = 123/213 (57%), Gaps = 21/213 (9%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEX--------------ETGTQSANTLS 455
QI S TE HI+ VH++EE+ +E T NTLS
Sbjct: 22 QIITNLVGNSMKFTEQGHIFIRVHLIEEVKRKMEALDDTSPENIEVTANSKNTMPYNTLS 81
Query: 454 GYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTP 275
G VAN +++ E+FR+F +SS+ A DS++L+++VEDTG+GI DAQ+R+FTP
Sbjct: 82 GLEVANNRKTLESFRMFK---DSSD------AIDSVNLLVTVEDTGIGITKDAQTRIFTP 132
Query: 274 FMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNE 95
FMQ S +R +GGTGIGLSI+K LV LM GEIGF SKP V STF+FTA+ +
Sbjct: 133 FMQADGSTSRTYGGTGIGLSITKRLVELMGGEIGFVSKPGVSSTFSFTAIFKENRKDPGD 192
Query: 94 NK-------SSEFKGINALVVDHRPVRAKVTRY 17
K +F+G+ ALVVD R RA+VT Y
Sbjct: 193 IKRYCPEPTPPDFQGMRALVVDGRCARAEVTMY 225
>dbj|BAB20583.1| histidine kinase 1 [Zea mays]
Length = 974
Score = 150 bits (378), Expect = 4e-35
Identities = 87/176 (49%), Positives = 109/176 (61%), Gaps = 20/176 (11%)
Frame = -2
Query: 484 TGTQSANTLSGYPVANRKRSWENFRVF------------SRELNSSEMPFAPIASDSISL 341
T + NTLSG+ A+R+ SW+ F++ S N S+ SD ++L
Sbjct: 528 TANGAFNTLSGFEAADRRNSWQYFKLLLSDKESLLDDLESENSNQSD-------SDRVTL 580
Query: 340 IISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASK 161
IS+EDTGVGIP AQ RVFTPFMQ S +R +GGTGIGLSISKCL LM G+I F S
Sbjct: 581 AISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFTSH 640
Query: 160 PQVGSTFTFTAVLTRAH------SSRN--ENKSSEFKGINALVVDHRPVRAKVTRY 17
P VGSTFTF+A L +H SSR+ E + FKG+ A++VD RPVR+ VTRY
Sbjct: 641 PSVGSTFTFSATLKHSHKDISGDSSRSLTEALPTAFKGMKAILVDGRPVRSAVTRY 696
>gb|ABD49494.1| cytokinin receptor 1 [Physcomitrella patens]
Length = 1075
Score = 150 bits (378), Expect = 4e-35
Identities = 94/226 (41%), Positives = 126/226 (55%), Gaps = 34/226 (15%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETG---------TQSA--------- 467
QI S TE HI+ VH+ E++ ++ G +SA
Sbjct: 539 QIITNLVGNSIKFTEAGHIFVCVHLNEDVNMVMDGSGGDADDTMDGEVESAGPLNDMNYR 598
Query: 466 -NTLSGYPVANRKRSWENF-RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQ 293
NTLSG A+ + SWE F R+ ++E + ++ +SD ++L++SVEDTGVGIP Q
Sbjct: 599 FNTLSGRETADYRNSWEMFERLLAQEQSHNDTWSYSDSSDVVNLVVSVEDTGVGIPLHVQ 658
Query: 292 SRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRA 113
RVFTPFMQ S +R +GGTGIGLSIS+CLV LM GE+GF S+P+VGSTFTFT L R
Sbjct: 659 DRVFTPFMQADSSTSRNYGGTGIGLSISRCLVELMSGEMGFVSRPKVGSTFTFTVELQRV 718
Query: 112 HSSRNENKSSE--------------FKGINALVVDHRPVRAKVTRY 17
++ E E F+G+ LVVD R VR +VTR+
Sbjct: 719 PANIPERILREGRNSYLQTPPLTTCFQGMRVLVVDGRKVRCEVTRH 764
>emb|CAF31355.1| putative histidine kinase [Cucurbita maxima]
Length = 981
Score = 147 bits (370), Expect = 3e-34
Identities = 88/218 (40%), Positives = 117/218 (53%), Gaps = 26/218 (11%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXE------------TGTQSANTLSGY 449
QI S TE HI+ VH+ E ++ E + TLSG
Sbjct: 496 QIITNLVGNSVKFTERGHIFVKVHLAENSKVSMDSEYVNGISDSGLFVLDGREFQTLSGR 555
Query: 448 PVANRKRSWENFRV------FSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSR 287
A+ + SW+NF+ F S+ D ++L++SVEDTG+GI AQ+R
Sbjct: 556 EAADDQNSWDNFKHLIADDNFQSNAASNNSAVTNKGCDHVTLMVSVEDTGIGILLHAQNR 615
Query: 286 VFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHS 107
VFTPFMQ S +R +GGTGIGLSISKCLV LM G+I F S+PQ+GSTF+FTAV +
Sbjct: 616 VFTPFMQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQIGSTFSFTAVFGKCKK 675
Query: 106 S--------RNENKSSEFKGINALVVDHRPVRAKVTRY 17
+ +E F+G+ A+VVD + VRA VTRY
Sbjct: 676 NSMNDMKKPNSEELPPSFRGMKAIVVDSKHVRASVTRY 713
>dbj|BAE80686.1| histidine kinase [Zea mays]
Length = 975
Score = 146 bits (368), Expect = 6e-34
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 13/163 (7%)
Frame = -2
Query: 466 NTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDS-----ISLIISVEDTGVGIPF 302
NTLSG+ A+R+ SW+ F++ + S SD ++L IS+EDTGVGIP
Sbjct: 535 NTLSGFEAADRRNSWQYFKMLLSDKESLLDDLEGTNSDQSDSDHVTLAISIEDTGVGIPL 594
Query: 301 DAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVL 122
AQ RVFTPFMQ S +R +GGTGIGLSISKCL LM G+I F S+P VGSTFTF+ L
Sbjct: 595 QAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFVSRPFVGSTFTFSTTL 654
Query: 121 TRAHS--------SRNENKSSEFKGINALVVDHRPVRAKVTRY 17
R++ S +E + FKG+ A+++D RPVR+ VTRY
Sbjct: 655 KRSYKDISVDSSRSLSEALPTAFKGMKAILIDGRPVRSAVTRY 697
>ref|XP_467688.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD16039.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
Length = 984
Score = 145 bits (366), Expect = 1e-33
Identities = 84/169 (49%), Positives = 110/169 (65%), Gaps = 13/169 (7%)
Frame = -2
Query: 484 TGTQSANTLSGYPVANRKRSWENFRVF--SRELNSSEMPFAPIAS---DSISLIISVEDT 320
T + NTLSG+ A+ + +W+ F++ +E + E+ D ++L+IS+EDT
Sbjct: 538 TANGAFNTLSGFQAADERNNWDYFKLLLSDKEPHMDELECDRSYQNDCDCVTLMISIEDT 597
Query: 319 GVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTF 140
GVGIP AQ RVFTPFMQ S +R +GGTGIGLSISKCL LM G+I F S+P VGSTF
Sbjct: 598 GVGIPLHAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFTSRPFVGSTF 657
Query: 139 TFTAVLTRA---HSSRNENKSSE-----FKGINALVVDHRPVRAKVTRY 17
TF+AVL R+ SS ++ SE FKG+ A++VD RPVR VTRY
Sbjct: 658 TFSAVLKRSCKDTSSDSKRSLSEALPTAFKGMKAILVDGRPVRGAVTRY 706
>dbj|BAD01586.1| histidine kinase 3 [Zea mays]
Length = 1049
Score = 138 bits (347), Expect = 2e-31
Identities = 88/213 (41%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXX--------------LEXETGTQSANTLS 455
QI S TE HI+ VH+V+E+ L + NTLS
Sbjct: 563 QIITNLVGNSMKFTEQGHIFVQVHLVKELSRKGNNFCDVSAHNREILYDSDNSMLWNTLS 622
Query: 454 GYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTP 275
G VA+ RS ENF +F + D+I L + VEDTG+GI DAQ R+FTP
Sbjct: 623 GLEVADSWRSLENFTMFKNSNGET---------DTIRLAVRVEDTGIGITKDAQMRIFTP 673
Query: 274 FMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNE 95
FMQ S +R +GGTGIGLSI+K LV LM GEIGF SK VGSTF+FTA+ +
Sbjct: 674 FMQADSSTSRTYGGTGIGLSITKRLVELMGGEIGFTSKSGVGSTFSFTAIFKENRGCPGD 733
Query: 94 NK-------SSEFKGINALVVDHRPVRAKVTRY 17
K +F+G+ AL++D R RA+VT Y
Sbjct: 734 MKRYYSEPTPLDFQGMRALIIDGRSARAEVTMY 766
>dbj|BAD01585.1| histidine kinase 3 [Zea mays]
Length = 1201
Score = 138 bits (347), Expect = 2e-31
Identities = 88/213 (41%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXX--------------LEXETGTQSANTLS 455
QI S TE HI+ VH+V+E+ L + NTLS
Sbjct: 715 QIITNLVGNSMKFTEQGHIFVQVHLVKELSRKGNNFCDVSAHNREILYDSDNSMLWNTLS 774
Query: 454 GYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTP 275
G VA+ RS ENF +F + D+I L + VEDTG+GI DAQ R+FTP
Sbjct: 775 GLEVADSWRSLENFTMFKNSNGET---------DTIRLAVRVEDTGIGITKDAQMRIFTP 825
Query: 274 FMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNE 95
FMQ S +R +GGTGIGLSI+K LV LM GEIGF SK VGSTF+FTA+ +
Sbjct: 826 FMQADSSTSRTYGGTGIGLSITKRLVELMGGEIGFTSKSGVGSTFSFTAIFKENRGCPGD 885
Query: 94 NK-------SSEFKGINALVVDHRPVRAKVTRY 17
K +F+G+ AL++D R RA+VT Y
Sbjct: 886 MKRYYSEPTPLDFQGMRALIIDGRSARAEVTMY 918
>gb|ABD49495.1| cytokinin receptor 2 [Physcomitrella patens]
Length = 1082
Score = 134 bits (338), Expect = 2e-30
Identities = 91/232 (39%), Positives = 125/232 (53%), Gaps = 40/232 (17%)
Frame = -2
Query: 592 QIXXXXXXXSXXXTEXXHIYXTVHVVEEIMXXLEXETG---------TQSA--------- 467
QI S TE HI+ VH+ E++ ++ + G +SA
Sbjct: 539 QIITNLVGNSIKFTEAGHIFVCVHLNEDVNNLMDGDEGEADDTLDGEVESAGPLTDMNYR 598
Query: 466 -NTLSGYPVANRKRSWENF-RVFSRE------LNSSEMPFAPIASDSISLIISVEDTGVG 311
NTLSG A+ + SWE F R+ ++E ++ + + + +++L+ISVEDTGVG
Sbjct: 599 FNTLSGRETADYRNSWEMFERLLAQEKSHRSGVDQDTRNYCDL-NGAVNLVISVEDTGVG 657
Query: 310 IPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFT 131
IP Q RVF PFMQ S +R +GGTGIGLSIS+ LV LM GE+ F S P+VGSTFTFT
Sbjct: 658 IPLHVQDRVFMPFMQADSSTSRNYGGTGIGLSISRSLVDLMSGEMEFVSHPKVGSTFTFT 717
Query: 130 AVLTRAHSSRNENKSSE--------------FKGINALVVDHRPVRAKVTRY 17
A L R ++ E+ E F+G+ LVVD R VR +VTR+
Sbjct: 718 AELQRVPANVPEHILREGRNCYLQTPPLTTCFQGMRVLVVDGRKVRCEVTRH 769
>gb|AAY32330.1| AHK1 [Phyllostachys praecox]
Length = 409
Score = 104 bits (259), Expect = 2e-21
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
Frame = -2
Query: 484 TGTQSANTLSGYPVANRKRSWENFRVFSRELNS--SEMPFAPIA---SDSISLIISVEDT 320
T + NTLSG+ A+ + SWE F++ + S E+ SDS++L+IS+EDT
Sbjct: 300 TANGALNTLSGFQAADERNSWEYFKLLLSDKESLLDELEGEKSNQNDSDSVTLMISIEDT 359
Query: 319 GVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
GVGIP AQ RVFTPFMQ S +R +GGTGIGLSISKCL LM G+I F
Sbjct: 360 GVGIPLHAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISF 409
>gb|AAZ45308.1| PAS [Dechloromonas aromatica RCB]
ref|YP_283778.1| PAS [Dechloromonas aromatica RCB]
Length = 1026
Score = 91.7 bits (226), Expect(2) = 1e-17
Identities = 51/109 (46%), Positives = 67/109 (61%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
S+++++ IS+EDTG GIP +A+ R+F PF QV S R HGGTG+GLSI K L+ LM G+
Sbjct: 795 SENLTIRISIEDTGTGIPDEAKDRIFAPFEQVDGSTTRQHGGTGLGLSIVKQLIHLMHGK 854
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRA 32
I +S P +GS FT TA L +A S + E RPVRA
Sbjct: 855 IEVSSTPGIGSCFTLTARLDKAPSKPRHQATPE-----------RPVRA 892
Score = 20.8 bits (42), Expect(2) = 1e-17
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 395 TELI*DAFCTHRIRLNKLDN 336
TELI D +I LN LDN
Sbjct: 755 TELIGDPLRLRQILLNLLDN 774
>ref|ZP_00317250.1| COG0642: Signal transduction histidine kinase [Microbulbifer
degradans 2-40]
Length = 942
Score = 88.2 bits (217), Expect = 2e-16
Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+ + +L V D+G+G+ D Q R+F PF Q+ S +R+HGGTG+GL+I+K LV M G
Sbjct: 418 SENQFTLKFRVTDSGIGLSQDQQERLFDPFTQLDSSESRLHGGTGLGLAIAKGLVDRMNG 477
Query: 181 EIGFASKPQVGSTFTFTAVLTR--AHSSRNENKSSEFKGINALVVDHRPV-RAKVTRYLP 11
IG S G+TF FT+ L R + S++ + +G++ALV DH + R ++T YL
Sbjct: 478 TIGVESTLGKGATFWFTSTLGRSPSASAKQTYLAGTLRGVHALVFDHSNMGRMEITHYLT 537
Query: 10 G 8
G
Sbjct: 538 G 538
>ref|ZP_00807318.1| PAS [Rhodopseudomonas palustris BisA53]
gb|EAO92430.1| PAS [Rhodopseudomonas palustris BisA53]
Length = 1039
Score = 85.5 bits (210), Expect = 1e-15
Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = -2
Query: 388 SSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSIS 209
S + + + D I L I + DTG+GIP + Q R+F PF+Q SI+R +GGTG+GL+I
Sbjct: 783 SVKASYHSLDDDKIELRIEIVDTGIGIPMEVQQRLFNPFVQADTSISRKYGGTGLGLAIC 842
Query: 208 KCLVGLMRGEIGFASKPQVGSTFTFT--AVLTRAHSSRNENKSSEFKG---INALVVDHR 44
K L +M GEIG S P+ GSTF FT + A + N+ G + LV +
Sbjct: 843 KQLALMMGGEIGVRSGPEPGSTFWFTVHCGICAAATIANKQVDPVLAGDLFLEILVAEDS 902
Query: 43 PVRAKVTRYLPGR 5
P+ A + L G+
Sbjct: 903 PIIASLISTLLGK 915
>gb|AAK25585.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
ref|NP_422417.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
Length = 595
Score = 84.7 bits (208), Expect = 2e-15
Identities = 49/130 (37%), Positives = 71/130 (54%)
Frame = -2
Query: 418 NFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIH 239
N F+R S A I D + L++ V DTG GIP A R+FTPF Q+ S+AR+H
Sbjct: 343 NAAKFTRSGGVSVTLRAEIVGDQVRLVVDVVDTGPGIPEAALPRLFTPFDQLNESVARLH 402
Query: 238 GGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINAL 59
GG+G+GL+IS+ L LM G++ ++ G+ F F+A+L A + G+ L
Sbjct: 403 GGSGLGLAISRELARLMGGDLTASNALGQGAHFRFSALLEAAEAPVVPTLGPSISGLRVL 462
Query: 58 VVDHRPVRAK 29
VVD V +
Sbjct: 463 VVDDHVVNRR 472
>ref|NP_900860.1| probable sensor/response regulator hybrid [Chromobacterium
violaceum ATCC 12472]
gb|AAQ58865.2| probable sensor/response regulator hybrid [Chromobacterium
violaceum ATCC 12472]
Length = 1105
Score = 83.6 bits (205), Expect = 5e-15
Identities = 47/104 (45%), Positives = 58/104 (55%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L +VEDTG+GIP Q +F PF Q S R GGTG+GL+IS+ LV LM GEIG
Sbjct: 544 VRLRFAVEDTGIGIPKPKQRELFRPFTQADASTTRRFGGTGLGLAISQRLVALMGGEIGL 603
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPV 38
S+P GS F FT R R S E +N L+ D P+
Sbjct: 604 YSEPGQGSAFWFTLRFPREQGIR--LSSPEMADLNVLIADDNPI 645
>ref|ZP_01077297.1| Serine/Threonine protein kinase and Signal Transduction Histidine
Kinase (STHK) with GAF sensor [Marinomonas sp. MED121]
gb|EAQ64527.1| Serine/Threonine protein kinase and Signal Transduction Histidine
Kinase (STHK) with GAF sensor [Marinomonas sp. MED121]
Length = 2241
Score = 83.2 bits (204), Expect = 6e-15
Identities = 46/114 (40%), Positives = 64/114 (56%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L I VEDTG+GI + +F F Q SI R GGTG+GL+I K LV LM+G+I
Sbjct: 1648 VQLNIEVEDTGIGISEQQCALLFESFTQANDSITREFGGTGLGLAICKQLVELMQGQIQV 1707
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYLPG 8
S+P +GSTF+ L RA + + + +N LVVD P+ +V + G
Sbjct: 1708 RSQPNIGSTFSLKINLERAEELAQPSAKNIYHNLNILVVDDNPISQQVISRMLG 1761
>ref|YP_476201.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
gb|ABD00938.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
Length = 1523
Score = 83.2 bits (204), Expect = 6e-15
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L +SV DTG+GIP DAQ+++F PF QV S R +GGTG+GL+I K L LM G I
Sbjct: 999 VQLRLSVRDTGIGIPKDAQTKLFQPFTQVDASTTRKYGGTGLGLAICKQLTELMGGRIFL 1058
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSS-----EFKGINALVVDHRPVRAKVTRY 17
S+ GSTF+ L R +R ++ + +G LVVD K+ RY
Sbjct: 1059 ESEEGRGSTFSLELTLERQPYARQISQQPARIPVDLQGKRLLVVDDNATNRKIVRY 1114
>gb|EAN29348.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606192.1| PAS [Magnetococcus sp. MC-1]
Length = 879
Score = 82.8 bits (203), Expect = 8e-15
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
DS+ L V+D+G+GIP +++F PF Q+ PS +R +GG+G+GL+I + LV LM GEI
Sbjct: 530 DSLLLQFEVQDSGIGIPPQQLTQLFQPFNQLDPSYSRKYGGSGLGLAICRHLVDLMGGEI 589
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSR-----NENKSSEFKGINALVVDHRPVRAKV 26
S P GS FTFTA AH+ + N + + G+ L+ + P V
Sbjct: 590 RLESPPSGGSRFTFTARFGYAHAPQDEVLDNSEQEVQLHGVRVLLAEDSPTNQMV 644
>gb|AAZ46848.1| PAS [Dechloromonas aromatica RCB]
ref|YP_285318.1| PAS [Dechloromonas aromatica RCB]
Length = 680
Score = 82.8 bits (203), Expect = 8e-15
Identities = 47/115 (40%), Positives = 68/115 (59%)
Frame = -2
Query: 370 APIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGL 191
A A+D + + VEDTG+GI DAQ ++F F Q S R +GGTG+GL+I+K +
Sbjct: 310 AETATDMV-VRFEVEDTGIGISPDAQEKIFEAFEQADQSTTRNYGGTGLGLAIAKHAAKM 368
Query: 190 MRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
M+G++G S P VGS F TA L + +++ E E G++ LVVD P+ V
Sbjct: 369 MKGDVGVRSTPGVGSVFWITARLGKVNAAGPEFIVPEAVGVSTLVVDDLPLTQAV 423
>ref|ZP_00316318.1| COG0642: Signal transduction histidine kinase [Microbulbifer
degradans 2-40]
Length = 765
Score = 82.4 bits (202), Expect = 1e-14
Identities = 49/128 (38%), Positives = 70/128 (54%)
Frame = -2
Query: 409 VFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGT 230
V +R++N+S+ +D + SVED+G+GI + Q ++F F Q S R GGT
Sbjct: 391 VEARQVNASD-------ADLPMIHFSVEDSGIGIESNQQEKLFDAFCQADGSTTRKFGGT 443
Query: 229 GIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
G+GL+I K L +M GEIG S+ + GSTF F+AV T + NE G LVV+
Sbjct: 444 GLGLTICKQLAEMMGGEIGVYSREKAGSTFWFSAVFTHVEKAINEQPPQSLAGKKLLVVN 503
Query: 49 HRPVRAKV 26
+ KV
Sbjct: 504 QSKIVEKV 511
>ref|ZP_00054204.1| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1193
Score = 82.0 bits (201), Expect = 1e-14
Identities = 52/135 (38%), Positives = 73/135 (54%)
Frame = -2
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+ R L+ E P + L ++ DTG+G+ + Q+R+F PFMQ +I+R +GG
Sbjct: 667 RISVRALDPRERP--------LRLEFNITDTGIGLDSEQQARLFEPFMQADVTISRRYGG 718
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TG+GLSI + LV +M GEIG S GSTF F L A + E + + GI LV+
Sbjct: 719 TGLGLSICRRLVAMMDGEIGVRSNMGQGSTFWFQVPLEPADVAPEE--TPDLSGIAVLVL 776
Query: 52 DHRPVRAKVTRYLPG 8
PV A+ R G
Sbjct: 777 AEGPVAAECLRQYLG 791
>dbj|BAE50760.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_421319.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 514
Score = 81.6 bits (200), Expect = 2e-14
Identities = 53/125 (42%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = -2
Query: 367 PIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLM 188
P SDS L V DTG+GI A +F+ F+Q SI R GGTG+GLSI K LV +M
Sbjct: 291 PEESDSSRLRFEVADTGIGIEPAAAPALFSEFVQADSSITRRFGGTGLGLSICKRLVEMM 350
Query: 187 RGEIGFASKPQVGSTFTFTAVLTRA----HSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
GEIGF S P G+TF FT L+ A S E+ + + L+ + PV K+T
Sbjct: 351 GGEIGFDSIPGEGTTFHFTLPLSAALPDQDSGAAEDAGPDLPPMAVLLAEDNPVNQKLTT 410
Query: 19 YLPGR 5
L R
Sbjct: 411 TLLDR 415
>ref|ZP_00054434.2| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 514
Score = 81.6 bits (200), Expect = 2e-14
Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V DTG+GIP DA R+F+ FMQV S AR +GGTG+GL+ISK L +M G IG S P V
Sbjct: 36 VRDTGIGIPEDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGV 95
Query: 151 GSTFTFT---AVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
GS FTF+ V+ A +SR +G LVVD P+ V
Sbjct: 96 GSLFTFSLPFEVVEGAPASR-----PCLEGRRVLVVDDSPINRDV 135
>gb|AAL59700.1| putative histidine kinase [Vibrio cholerae]
Length = 1268
Score = 81.3 bits (199), Expect = 2e-14
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L S++DTG+GI + Q+ +F+ F Q SI+R +GGTG+GL+ISK LV LM GEIG
Sbjct: 687 INLSFSIKDTGIGITLEQQNALFSGFQQADSSISRRYGGTGLGLAISKRLVNLMGGEIGV 746
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKG---INALVVD 50
S+ GSTF+F V+ A +N + + ++ L+VD
Sbjct: 747 ESEFGCGSTFSFNVVVRNAEKRAIQNSQTFTRSNEKLSVLIVD 789
>gb|ABA87031.1| putative histidine kinase [Vibrio cholerae]
Length = 1268
Score = 81.3 bits (199), Expect = 2e-14
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L S++DTG+GI + Q+ +F+ F Q SI+R +GGTG+GL+ISK LV LM GEIG
Sbjct: 687 INLSFSIKDTGIGITLEQQNALFSGFQQADSSISRRYGGTGLGLAISKRLVNLMGGEIGV 746
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKG---INALVVD 50
S+ GSTF+F V+ A +N + + ++ L+VD
Sbjct: 747 ESEFGCGSTFSFNVVVRNAEKRAIQNSQTFTRSNEKLSVLIVD 789
>ref|ZP_00760913.1| COG0642: Signal transduction histidine kinase [Vibrio cholerae
MO10]
Length = 1252
Score = 81.3 bits (199), Expect = 2e-14
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L S++DTG+GI + Q+ +F+ F Q SI+R +GGTG+GL+ISK LV LM GEIG
Sbjct: 671 INLSFSIKDTGIGITLEQQNALFSGFQQADSSISRRYGGTGLGLAISKRLVNLMGGEIGV 730
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKG---INALVVD 50
S+ GSTF+F V+ A +N + + ++ L+VD
Sbjct: 731 ESEFGCGSTFSFNVVVRNAEKRAIQNSQTFTRSNEKLSVLIVD 773
>emb|CAE77957.1| Sensory transduction histidine kinase [Bdellovibrio bacteriovorus
HD100]
ref|NP_967303.1| Sensory transduction histidine kinase [Bdellovibrio bacteriovorus
HD100]
Length = 1132
Score = 80.9 bits (198), Expect = 3e-14
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
+L+IS+ DTG+GIP D Q +F F Q S+ R +GGTG+GL+ISK LV LM G+I F
Sbjct: 903 TLLISITDTGIGIPEDRQHMIFQKFSQADNSVTRKYGGTGLGLAISKSLVELMGGQIWFK 962
Query: 166 SKPQVGSTFTFT 131
S+P G+TF FT
Sbjct: 963 SRPGTGTTFFFT 974
>ref|ZP_00527745.1| PAS [Chlorobium phaeobacteroides DSM 266]
gb|EAM35872.1| PAS [Chlorobium phaeobacteroides DSM 266]
Length = 1398
Score = 80.9 bits (198), Expect = 3e-14
Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L SV+DTG+GIP R+F F QV S R +GGTG+GL+IS+ LV LM G+IG S
Sbjct: 1020 LRFSVKDTGIGIPEAKLDRLFKSFTQVDASTTRKYGGTGLGLAISRQLVELMGGKIGVIS 1079
Query: 163 KPQVGSTFTFTAVLTRA--HSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
GS F FT L + +S+ +S F GI ALVVD K+ + L
Sbjct: 1080 HEGNGSEFWFTIFLKKQPFYSTIETQPTSAFAGIRALVVDDNAANRKMLKAL 1131
>ref|ZP_00676542.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO38136.1| PAS [Pelobacter propionicus DSM 2379]
Length = 944
Score = 80.9 bits (198), Expect = 3e-14
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+ D + SV+DTG+GIP D VFT F+Q S R GG+G+GL+IS+ LV LM
Sbjct: 499 LTPDQARVRFSVKDTGIGIPADKLESVFTGFVQAESSTTRRFGGSGLGLTISRRLVRLMG 558
Query: 184 GEIGFASKPQVGSTFTFTAVL----------TRAHSSRN-ENKSSEFKGINALVVDHRPV 38
GE+ S GSTF FT L RA++ RN + S KG++ LVV+ P+
Sbjct: 559 GELEVESTLGKGSTFHFTITLGRDGDTPAMNGRAYTGRNGAGQRSRLKGLHLLVVEDNPI 618
Query: 37 RAKVTRYL 14
++ + L
Sbjct: 619 NRQIAQEL 626
>gb|AAM05416.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
ref|NP_616936.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
Length = 1000
Score = 80.1 bits (196), Expect = 5e-14
Identities = 44/113 (38%), Positives = 66/113 (58%)
Frame = -2
Query: 394 LNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLS 215
L++S+ P + ++L+ V+DTG+GIP + S++F PF+Q S+ R +GGTG+GL+
Sbjct: 597 LSNSDFP------EEVALLFKVKDTGIGIPPEKLSQIFDPFIQADASVTREYGGTGLGLA 650
Query: 214 ISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALV 56
IS LV LM G I S+ G TF FT + R SS N + + + LV
Sbjct: 651 ISSQLVELMEGRIWVESEVGKGCTFYFTVRVKRGESSENYGQGNNIPEESLLV 703
>emb|CAG35088.1| probable two-component system sensory/regulatory protein (hybrid
family) [Desulfotalea psychrophila LSv54]
ref|YP_064095.1| two-component system sensory/regulatory protein (hybrid family)
[Desulfotalea psychrophila LSv54]
Length = 910
Score = 80.1 bits (196), Expect = 5e-14
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+ + L S+ DTGVGI D Q ++F PF Q S+ R +GGTG+GL+I K LV M
Sbjct: 680 LGEKGVILKFSIIDTGVGIALDVQKQLFVPFTQADSSVTRNYGGTGLGLTICKKLVVAMG 739
Query: 184 GEIGFASKPQVGSTFTFTAVL----------TRAHSSRNENKSSEFKGINALVVDHRPV 38
G+IG S P GSTF FT L T A + ++ S +G+ L+VD +
Sbjct: 740 GDIGLESSPGAGSTFWFTLDLGVGQEGDAQNTEAVQVNSVDRKSLLEGLKILLVDDNEI 798
>dbj|BAE51097.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_421656.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 1196
Score = 79.7 bits (195), Expect = 7e-14
Identities = 52/135 (38%), Positives = 70/135 (51%)
Frame = -2
Query: 412 RVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGG 233
R+ R L+ E P + L S+ DTG+G+ + Q+R+F PFMQ +I+R +GG
Sbjct: 673 RIAVRALDPRERP--------LRLEFSITDTGIGLDSEQQARLFEPFMQADITISRRYGG 724
Query: 232 TGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
TG+GLSI + LV +M GEIG S GSTF F L A + GI LV+
Sbjct: 725 TGLGLSICRRLVAMMGGEIGVRSNVGQGSTFWFQVPLEPAEV--EAEPPLDLSGIAVLVL 782
Query: 52 DHRPVRAKVTRYLPG 8
PV A+ R G
Sbjct: 783 AEGPVAAECLRQYLG 797
>ref|NP_901251.1| probable sensor/response hybrid [Chromobacterium violaceum ATCC
12472]
gb|AAQ59257.2| probable sensor/response hybrid [Chromobacterium violaceum ATCC
12472]
Length = 664
Score = 79.7 bits (195), Expect = 7e-14
Identities = 45/96 (46%), Positives = 57/96 (59%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
ISV+DTG+GI D Q R+F PF Q S R GGTG+GL IS+ LVG+M G I S+P
Sbjct: 182 ISVKDTGIGIAPDQQKRLFKPFSQADSSTTRRFGGTGLGLVISQRLVGMMGGRIELESEP 241
Query: 157 QVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
GS F FT L RA S+ + + + LV+D
Sbjct: 242 GSGSEFHFTLTLPRASDSQLCPPAEDVARMRVLVLD 277
>gb|EAN26861.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00608726.1| PAS [Magnetococcus sp. MC-1]
Length = 997
Score = 79.3 bits (194), Expect = 9e-14
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
IA + L V DTG+GI Q +VF PF Q G I R HGGTG+GLSI + L+ M
Sbjct: 632 IADKQVQLAFHVVDTGIGISDADQEKVFRPFEQAGTYITRTHGGTGLGLSICQSLIHKMG 691
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV-DH 47
G+I S+ GSTFT L A S +N S G +ALV+ DH
Sbjct: 692 GKITVHSRADHGSTFTAQVNLDLAEESTAQNFSRLLTGQSALVIHDH 738
>ref|ZP_01116725.1| GGDEF family protein [Reinekea sp. MED297]
gb|EAR07317.1| GGDEF family protein [Reinekea sp. MED297]
Length = 773
Score = 79.3 bits (194), Expect = 9e-14
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D+ +L+ISV+DTG+GI D +F F Q SI+R +GGTG+GL IS ++ M GEI
Sbjct: 549 DTHTLMISVQDTGIGIKPDNLDAMFAAFTQADSSISRKYGGTGLGLRISSKIIEQMGGEI 608
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSE------FKGINALVVDHRPVRAKV 26
S+ GSTFTFT L A + N +S+ + +VVD PV KV
Sbjct: 609 WAESETGQGSTFTFTLPLVLAEAQPENNHASDAPLKTSIDDMVVMVVDDNPVNLKV 664
>dbj|BAE52950.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_423509.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 1258
Score = 79.3 bits (194), Expect = 9e-14
Identities = 42/102 (41%), Positives = 59/102 (57%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+++ L V DTG+G+ + R+F F Q S R +GGTG+GL+IS+ L LM GE+
Sbjct: 761 EAVRLRFEVRDTGIGLSAEQMGRLFQSFQQADTSTTRKYGGTGLGLAISRKLAELMDGEV 820
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
G S+P GSTF FTA L + R + +G + LVVD
Sbjct: 821 GVESQPGRGSTFWFTACLGKGRPRRALVPKPDLRGRHMLVVD 862
>gb|ABB30326.1| histidine kinase [Geobacter metallireducens GS-15]
ref|YP_383051.1| histidine kinase [Geobacter metallireducens GS-15]
Length = 661
Score = 79.0 bits (193), Expect = 1e-13
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L+ +V DTG+GIP D S +F F Q S R +GG+G+GL+I + LV +M G+I
Sbjct: 428 DGVMLLFTVSDTGIGIPADKLSLIFESFTQADGSTTRKYGGSGLGLAICRALVSMMGGDI 487
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEF----KGINALVVDHRPVRAKVTRYL 14
S VGSTF FTA L E + + + + L+ + P+ KV+R L
Sbjct: 488 SVKSAVGVGSTFRFTARLGTCALQNREIRQAGIPRFGREVKILLAEDNPMNLKVSRLL 545
>dbj|BAE52539.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_423098.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 992
Score = 78.6 bits (192), Expect = 1e-13
Identities = 46/106 (43%), Positives = 59/106 (55%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L V DTG+GIP DA R+F+ FMQV S AR +GGTG+GL+ISK L +M G IG S
Sbjct: 510 LRFDVRDTGIGIPQDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVES 569
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
P GS F F+ ++ + + G LVVD P+ V
Sbjct: 570 TPGAGSLFWFSLPFQMVETAPPQR--PDLAGRRILVVDDSPINRDV 613
>ref|ZP_01090362.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
gb|EAQ81194.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
Length = 1259
Score = 78.2 bits (191), Expect = 2e-13
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = -2
Query: 355 DSISLI-ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
D+I+ I SVEDTG+G+P R+F F QV S R +GGTG+GL+I K LV LM GE
Sbjct: 745 DAIARIRFSVEDTGIGVPRSKMQRLFKAFSQVDASTTRSYGGTGLGLAICKQLVELMGGE 804
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L +A N +G+ L VD + +V +
Sbjct: 805 IGVESEVGKGSTFWFTLPL-QAIERSTCNLIPNIQGLRVLAVDDNHMNLQVIK 856
>ref|ZP_01118139.1| sensory transduction histidine kinase [Polaribacter irgensii 23-P]
gb|EAR12648.1| sensory transduction histidine kinase [Polaribacter irgensii 23-P]
Length = 907
Score = 78.2 bits (191), Expect = 2e-13
Identities = 37/91 (40%), Positives = 58/91 (63%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ +++ ISV DTG+GIP D +F PF+Q + AR +GG+G+GL+I K L+ LM G I
Sbjct: 555 NKVNVEISVSDTGIGIPSDKIKNIFDPFIQSSDNTARKYGGSGLGLNIVKQLIDLMHGSI 614
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSS 83
S+ +GSTFT T L ++ ++ + K +
Sbjct: 615 SVKSQESIGSTFTLTIPLIKSEKTKVKTKKN 645
>emb|CAE10078.1| HYBRID HISTIDINE KINASE [Wolinella succinogenes]
ref|NP_907178.1| HYBRID HISTIDINE KINASE [Wolinella succinogenes DSM 1740]
Length = 1019
Score = 78.2 bits (191), Expect = 2e-13
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Frame = -2
Query: 388 SSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSIS 209
S F ++ I+L I V DTG+GIP QSR+F PF Q R +GGTG+GL+I+
Sbjct: 697 SCSFRFQRQSASKITLFIEVSDTGIGIPLSQQSRIFEPFTQQDAQNTRKYGGTGLGLTIT 756
Query: 208 KCLVGLMRGEIGFASKPQVGSTFTFT-----AVLTRAHSSRNENKSSEFKGINALVVDHR 44
K LV +M G++ S+P+ GSTF T + S + S L+VD
Sbjct: 757 KRLVEIMGGDLTLESRPKWGSTFFITLPHLQIATPKTSKSSLQTPPSSLPCAKILLVDDV 816
Query: 43 PVRAKVTR-YLPGRP 2
++ R +L G+P
Sbjct: 817 SDNREIVRAFLEGQP 831
>ref|YP_434811.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC30386.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 842
Score = 78.2 bits (191), Expect = 2e-13
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
++ L ISV DTG+GIP Q ++F F Q S R +GGTG+GLSISK LV LM GE+G
Sbjct: 602 NMKLKISVIDTGIGIPLGKQQKIFESFSQADGSTTRTYGGTGLGLSISKSLVELMGGELG 661
Query: 172 FASKPQVGSTFTFTAVLTR 116
S+P GS+F F+ L +
Sbjct: 662 VESRPGEGSSFWFSVWLEK 680
>dbj|BAC59810.1| sensor histidine kinase/response regulator [Vibrio parahaemolyticus
RIMD 2210633]
ref|NP_797926.1| sensor histidine kinase/response regulator [Vibrio parahaemolyticus
RIMD 2210633]
Length = 576
Score = 77.8 bits (190), Expect = 3e-13
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+A ++ +++S+ DTG+GI Q+ +FT F Q SI R GGTG+GL+I+K LV +MR
Sbjct: 355 VAEENDEVVVSISDTGIGISRAKQAHLFTAFHQGDRSITRRFGGTGLGLAITKHLVEMMR 414
Query: 184 GEIGFASKPQVGSTFTF-TAVLTRAHSSR----NENKSSEFKGINALVVD 50
GEI S+ GS FT VLTR + SR N+ S K +N L+V+
Sbjct: 415 GEISVKSRENEGSDFTIRIPVLTRYNQSRPVKIEHNRPS--KALNLLIVE 462
>ref|ZP_01132440.1| hypothetical protein PTD2_04516 [Pseudoalteromonas tunicata D2]
gb|EAR30806.1| hypothetical protein PTD2_04516 [Pseudoalteromonas tunicata D2]
Length = 1235
Score = 77.8 bits (190), Expect = 3e-13
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
+L SV DTG+GI + + +FTPFMQ+ SI R +GGTG+GL+IS+ L LM G I
Sbjct: 633 TLRFSVIDTGIGIEQERINLLFTPFMQMDSSITRKYGGTGLGLAISRQLTELMGGRIWVE 692
Query: 166 SKPQVGSTFTFTAVLTRAHSSRNENK--SSEFKGINALVVDHRPVRAKV 26
S+ VGS F FT LT S + + KG+ ALVVD + +V
Sbjct: 693 SQLNVGSQFHFTCKLTLNDSEKTPLMPFHNRLKGMRALVVDDNAMAREV 741
>gb|AAR35690.1| sensory box histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_953363.1| sensory box histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 982
Score = 77.8 bits (190), Expect = 3e-13
Identities = 40/76 (52%), Positives = 50/76 (65%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
DS+ L +V DTG+GIP + +F F Q SI R +GGTG+GL+I K LV +M GEI
Sbjct: 618 DSVKLRFAVRDTGIGIPPEKTELLFEKFTQADASITRKYGGTGLGLAICKRLVQMMGGEI 677
Query: 175 GFASKPQVGSTFTFTA 128
G S+P VGS F FTA
Sbjct: 678 GVTSRPGVGSEFWFTA 693
>gb|AAZ47577.1| PAS [Dechloromonas aromatica RCB]
ref|YP_286047.1| PAS [Dechloromonas aromatica RCB]
Length = 764
Score = 77.4 bits (189), Expect = 3e-13
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++ DS+ L V DTG+GI +A+ +F+ F Q S R +GGTG+GL+I++ L LM
Sbjct: 531 VSEDSVLLRFEVADTGIGISAEARDEIFSAFRQADNSTTRRYGGTGLGLAITRQLAELMG 590
Query: 184 GEIGFASKPQVGSTFTFTAVLTRA 113
GE+G +S P GS F FTA L RA
Sbjct: 591 GEVGVSSTPGQGSLFWFTASLKRA 614
>emb|CAE25761.1| sensor histidine kinase with a response regulator receiver domain
[Rhodopseudomonas palustris CGA009]
ref|NP_945670.1| sensor histidine kinase with a response regulator receiver domain
[Rhodopseudomonas palustris CGA009]
Length = 636
Score = 77.4 bits (189), Expect = 3e-13
Identities = 43/81 (53%), Positives = 50/81 (61%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L I V DTG+GI DAQ+R+F F Q IAR GGTG+GLSIS +V M G I S
Sbjct: 272 LRIIVRDTGIGIAPDAQARIFHEFEQADAGIARNFGGTGLGLSISDRIVAAMGGRIALES 331
Query: 163 KPQVGSTFTFTAVLTRAHSSR 101
KP GSTFT T L+ A + R
Sbjct: 332 KPGEGSTFTITLPLSTAENDR 352
>ref|ZP_00676854.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO37421.1| PAS [Pelobacter propionicus DSM 2379]
Length = 604
Score = 77.4 bits (189), Expect = 3e-13
Identities = 44/85 (51%), Positives = 53/85 (62%)
Frame = -2
Query: 334 SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQ 155
+V DTG+GIP D + +F F QV S R +GGTG+GL+I K LV LM G I F SK
Sbjct: 377 AVTDTGIGIPEDKKDLLFHVFSQVDASHTRTYGGTGLGLAICKELVELMGGMIDFDSKEG 436
Query: 154 VGSTFTFTAVLTRAHSSRNENKSSE 80
VGSTF FT L A S RN ++E
Sbjct: 437 VGSTFYFTISLREAKSERNAPTAAE 461
>ref|ZP_01090668.1| FOG: CheY-like receiver [Blastopirellula marina DSM 3645]
gb|EAQ80514.1| FOG: CheY-like receiver [Blastopirellula marina DSM 3645]
Length = 954
Score = 77.4 bits (189), Expect = 3e-13
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ + ++ DTGVGI Q R+F PF QV S R GG+G+GL+I L+ LM G +
Sbjct: 461 VRIRFTISDTGVGITPADQKRIFEPFTQVDSSSTRNFGGSGLGLTICHELLELMGGRLEL 520
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSS----EFKGINALVVDHRPVRAKVTRYL 14
S+P VGS F+F + R ++ + +S+ EF G+ LVVD K+ R L
Sbjct: 521 NSEPGVGSRFSFALLFPRTRTAESRLRSAILPPEFAGMQVLVVDDNETNRKILREL 576
>gb|ABC22833.1| PAS/PAC Sensor Hybrid Histidine Kinase [Rhodospirillum rubrum ATCC
11170]
ref|YP_427120.1| PAS/PAC Sensor Hybrid Histidine Kinase [Rhodospirillum rubrum ATCC
11170]
Length = 866
Score = 77.4 bits (189), Expect = 3e-13
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
+L VEDTG+GIP + Q +F F QV S AR GG+G+GLSI + LVGLM G +GF
Sbjct: 646 ALRFEVEDTGIGIPKEKQDTLFHDFTQVSASTARRFGGSGLGLSICRRLVGLMGGRLGFD 705
Query: 166 SKPQVGSTFTFTAVLTRAHSSRNENKSSEFKG--INALVVDHRPVRAKV 26
S P VGS F F L +S++ F+G ++ LVV+ + +V
Sbjct: 706 STPGVGSLFWFEVDLPEVVASQSP-PPPPFQGPPLSILVVEDNEINRQV 753
>dbj|BAC48514.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
ref|NP_769889.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
Length = 897
Score = 77.4 bits (189), Expect = 3e-13
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D I L I+V DTG+GI D R+F F+Q SIAR GGTG+GL+I++ L LMRGE+
Sbjct: 553 DHILLSITVRDTGIGIAPDMHERIFEDFVQADDSIARRFGGTGLGLAIARRLTRLMRGEL 612
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENK-SSEFKGINALVVDHRPVRAKV 26
S P GSTF L A S + + + L+VD PV +V
Sbjct: 613 TVESTPGAGSTFALEVPLGLAASGIAQGALPPPSRRLRVLLVDDDPVNCQV 663
>ref|ZP_01167898.1| serine/threonine kinase with two-component sensor domain
[Oceanospirillum sp. MED92]
gb|EAR59994.1| serine/threonine kinase with two-component sensor domain
[Oceanospirillum sp. MED92]
Length = 2109
Score = 77.0 bits (188), Expect = 4e-13
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Frame = -2
Query: 367 PIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLM 188
P D + ++EDTG+GIP AQSR+F F Q SI R +GGTG+GL+I++ ++ +
Sbjct: 1761 PDTQDKLKTRFTIEDTGIGIPEKAQSRIFQHFTQADSSITRRYGGTGLGLAITRQIIERL 1820
Query: 187 RGEIGFASKPQVGSTFTF------TAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
GEIGF S + G+TF F T L ++ K S ++ L+V+ PV +V
Sbjct: 1821 NGEIGFESTEEQGTTFWFELSFPITDELPAEVANVPMPKPSTC--LDILLVEDTPVNQEV 1878
Query: 25 TRYL 14
T+ L
Sbjct: 1879 TKGL 1882
>ref|ZP_00054895.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1099
Score = 77.0 bits (188), Expect = 4e-13
Identities = 44/102 (43%), Positives = 58/102 (56%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V DTG+GIP +AQ R+F+ FMQV S AR +GGTG+GL+I + L LM GE+G S+P
Sbjct: 619 VRDTGIGIPPEAQGRLFSMFMQVDASTARRYGGTGLGLAICRRLAELMGGEVGLESQPGK 678
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
GS F + + + + G LVVD PV V
Sbjct: 679 GSRFWMSVPMELL--APQSAAPPDLTGHRVLVVDDNPVNCDV 718
>ref|ZP_00512843.1| PAS [Chlorobium limicola DSM 245]
gb|EAM42494.1| PAS [Chlorobium limicola DSM 245]
Length = 1397
Score = 77.0 bits (188), Expect = 4e-13
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ + + SV+DTG+GIP + R+F F QV S+ R +GGTG+GL+IS+ LV LM GEI
Sbjct: 1021 EEVLVRFSVKDTGIGIPREKLDRLFRSFTQVDASMTRKYGGTGLGLAISRQLVELMSGEI 1080
Query: 175 GFASKPQVGSTFTFTAVLTR--AHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
G S+ +GS F FT L + S + G LVVD + R L
Sbjct: 1081 GVNSQSGIGSEFWFTLSLKKNIFPSENGQYPLDSITGTRLLVVDDNAENRNMLRML 1136
>ref|ZP_00108815.1| COG0642: Signal transduction histidine kinase [Nostoc punctiforme PCC
73102]
Length = 1559
Score = 77.0 bits (188), Expect = 4e-13
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++S + ++ ++ DTG+GI F+ Q R+FTPF QV S R +GGTG+GL+I K LV LM
Sbjct: 1041 LSSTTATIYFAITDTGLGITFEDQCRLFTPFTQVDASNTRKYGGTGLGLAICKQLVSLMG 1100
Query: 184 GEIGFASKPQVGSTFTFTAVLT-RAHSSRNENKSSEFKGINALVVDHRPVRAKVTRY 17
GEIG S+ GS F F + + +E++ LVVD K+ +
Sbjct: 1101 GEIGVESRLGKGSKFWFEVTFAQQLYPISSESERELLINRRLLVVDDNATNRKIIHH 1157
>ref|ZP_01154229.1| PAS [Methanosaeta thermophila PT]
gb|EAR48003.1| PAS [Methanosaeta thermophila PT]
Length = 1692
Score = 77.0 bits (188), Expect = 4e-13
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D L V DTG+GIP + R+F F QV SI R +GGTG+GL+ISK LV +M G I
Sbjct: 1248 DLSELHFFVRDTGIGIPPEKMDRLFHTFSQVDSSITRRYGGTGLGLAISKHLVEMMGGRI 1307
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
S P GSTF FT + S R++ +S KG AL++
Sbjct: 1308 WAESIPGAGSTFHFT--IKARVSERSQERSDLLKGRRALLI 1346
>dbj|BAE49914.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_420473.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 976
Score = 77.0 bits (188), Expect = 4e-13
Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Frame = -2
Query: 370 APIASDSISLI-ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVG 194
A I D I+ I + V+DTG+GI +A+SR+F F Q SI R GGTG+GL+I + LV
Sbjct: 605 AEIQPDGIAAIRMEVKDTGIGISPEARSRLFANFAQADASITRRFGGTGLGLAICQNLVR 664
Query: 193 LMRGEIGFASKPQVGSTFTF-----TAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAK 29
LM GEIG S P GSTF F AV ++ + + + + L+ + PV K
Sbjct: 665 LMNGEIGVDSVPGQGSTFWFVVRLPVAVALEEGAAAPPSPAKTLRPLKVLLAEDNPVNQK 724
Query: 28 V 26
V
Sbjct: 725 V 725
>gb|AAZ47484.1| PAS [Dechloromonas aromatica RCB]
ref|YP_285954.1| PAS [Dechloromonas aromatica RCB]
Length = 1275
Score = 76.6 bits (187), Expect = 6e-13
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+S+ + + VEDTG+G+ + R+F F Q + R +GGTG+GL+I++ L LM G
Sbjct: 905 SSNDVLIRFEVEDTGIGVAPENLPRLFQVFEQGDSTTTRRYGGTGLGLAITRRLAQLMGG 964
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
E G S VGSTF TA L R ++ ++ +G ALV+D PV V L
Sbjct: 965 EAGVESTLGVGSTFWLTARLGRVRAATGRHRIPSLRGKRALVIDDMPVTRLVQSQL 1020
>gb|EAO25129.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00662234.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Syntrophomonas wolfei str. Goettingen]
Length = 497
Score = 76.6 bits (187), Expect = 6e-13
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
DS L+ ++ DTG+GIP RVF PF Q S +R +GG G+GL I K L+ LM GEI
Sbjct: 170 DSYRLLFTISDTGIGIPSSFVERVFEPFTQADNSNSRQYGGAGLGLYICKKLLELMEGEI 229
Query: 175 GFASKPQVGSTFTFTA--------------VLTRAHSSRNENKSSEFKGINALVVDHRPV 38
+S P VG+T +F+ L R E +F I L+V+ P+
Sbjct: 230 SLSSMPGVGTTVSFSIPLIEMDKVEIEVPYELNREQFENKEEALLDFTPIRVLLVEDNPL 289
Query: 37 RAKV 26
K+
Sbjct: 290 NQKI 293
>ref|ZP_00658601.1| PAS [Nocardioides sp. JS614]
gb|EAO06596.1| PAS [Nocardioides sp. JS614]
Length = 1090
Score = 76.6 bits (187), Expect = 6e-13
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = -2
Query: 391 NSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSI 212
+ SE P + L + V DTGVGI ++ R+F F Q PS R HGGTG+GL+I
Sbjct: 580 HESESEPGPGPGHEVVLQVDVADTGVGIEPHSRERLFDAFTQADPSTTRRHGGTGLGLAI 639
Query: 211 SKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENK--SSEFKGINALVVD 50
S+ L + GEI S+P GSTF+FTA R + ++ + G ALV+D
Sbjct: 640 SRQLAIALGGEIWVESEPGRGSTFSFTARFGRGSGATGASREHARHLAGRRALVID 695
>ref|ZP_00815187.1| PAS [Shewanella putrefaciens CN-32]
gb|EAO93472.1| PAS [Shewanella putrefaciens CN-32]
Length = 1771
Score = 76.3 bits (186), Expect = 7e-13
Identities = 44/113 (38%), Positives = 64/113 (56%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D ++L SV D+G+G+ + Q+++F F Q S R +GGTG+GL+I K LV LM G
Sbjct: 1187 NDDVTLRFSVRDSGIGLTDEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGN 1246
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L + S + E +G++ LVVD + R
Sbjct: 1247 IGVESQFGHGSTFYFTVKL-QISSGQKLTVGQELEGMSVLVVDDNATARDIMR 1298
>ref|ZP_01064298.1| signal transduction histidine kinase [Vibrio sp. MED222]
gb|EAQ54307.1| signal transduction histidine kinase [Vibrio sp. MED222]
Length = 574
Score = 76.3 bits (186), Expect = 7e-13
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
S ISVEDTG+GI S +F+PF+Q +I R GGTG+GL+I+K LV LMRG I
Sbjct: 356 SFRISVEDTGIGISSQQLSSLFSPFVQADSTITRRFGGTGLGLAITKRLVELMRGRISVE 415
Query: 166 SKPQVGSTFTF-TAVLTRAHSSRNENKSSEFKGI-----NALVVDHRPVRAKVTRYLPGR 5
S+P GS F VLTR ++++ ++ + + LVV+ P V + + R
Sbjct: 416 SEPGKGSKFEVRLPVLTRVTNNQDHAAEDKYSQVPRTRYSVLVVEDNPTNQMVIQLILAR 475
>ref|ZP_00944419.1| Hypothetical Protein RRSL_02899 [Ralstonia solanacearum UW551]
gb|EAP73104.1| Hypothetical Protein RRSL_02899 [Ralstonia solanacearum UW551]
Length = 1000
Score = 76.3 bits (186), Expect = 7e-13
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A+D+ LII + DTG+GI +AQ+ +FTPF+Q AR HGGTG+GL+IS+ L LM G
Sbjct: 525 ATDTAHLIIRIADTGIGIAPEAQATLFTPFVQADSPAARRHGGTGLGLAISRQLARLMGG 584
Query: 181 EIGFASKPQVGSTFT 137
+ S P VG+T T
Sbjct: 585 SLDMDSTPGVGTTLT 599
>ref|NP_900552.1| probable sensor/response regulator hybrid protein [Chromobacterium
violaceum ATCC 12472]
gb|AAQ58556.2| probable sensor/response regulator hybrid protein [Chromobacterium
violaceum ATCC 12472]
Length = 902
Score = 76.3 bits (186), Expect = 7e-13
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
DS+ L V DTG+G+ + ++++F F Q S +R +GGTG+GL+IS+ L +M GE+
Sbjct: 316 DSLLLHFEVSDTGIGLSAEQKAKLFQSFQQADTSTSRKYGGTGLGLAISRKLAEMMGGEV 375
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
G S+P GSTF FTA L + + ALVVD
Sbjct: 376 GVDSEPGKGSTFWFTARLGKGEPHPERLPGVGMRNRRALVVD 417
>ref|ZP_01109417.1| multi-sensor hybrid histidine kinase [Alteromonas macleodii 'Deep
ecotype']
gb|EAR06121.1| multi-sensor hybrid histidine kinase [Alteromonas macleodii 'Deep
ecotype']
Length = 959
Score = 76.3 bits (186), Expect = 7e-13
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+++ L+ SV+DTG+GI D QS +F F Q S R GGTG+GLSISK L GLM G+I
Sbjct: 725 NTLRLLCSVKDTGIGIAQDKQSTIFDVFTQEDLSTTRKFGGTGLGLSISKQLCGLMGGDI 784
Query: 175 GFASKPQVGSTFTFTAVLTRAHSS-------RNENKSSEFKGINALVVDHRPVRAKVTR 20
S GSTF+FT L A S N +K+ + K L+V+ + + +
Sbjct: 785 KLESVKGNGSTFSFTIQLEEADESLIKPIHYNNASKTVKGKKRKVLIVEDNDINQVIAK 843
>ref|ZP_00667736.1| Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Syntrophobacter fumaroxidans MPOB]
gb|EAO19728.1| Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Syntrophobacter fumaroxidans MPOB]
Length = 823
Score = 76.3 bits (186), Expect = 7e-13
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
I+ L I V D+G+GIP D +F PF QV S +R +GGTG+GL+I++ +V ++R
Sbjct: 462 ISQSGHRLNIEVNDSGIGIPQDKLETIFQPFRQVDSSTSREYGGTGLGLTITRSIVEMLR 521
Query: 184 GEIGFASKPQVGSTFTFTAVL 122
GEI +SKP GSTFT + L
Sbjct: 522 GEISVSSKPGEGSTFTVSLPL 542
>ref|ZP_00676459.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO38053.1| PAS [Pelobacter propionicus DSM 2379]
Length = 785
Score = 76.3 bits (186), Expect = 7e-13
Identities = 49/113 (43%), Positives = 61/113 (53%)
Frame = -2
Query: 445 VANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQ 266
V N + EN ++F L S M +++ L V DTG GIP DAQ +F F Q
Sbjct: 532 VGNAVKFTENGQIF---LGVSLME---TTAENTQLRFEVRDTGTGIPLDAQPYIFDAFSQ 585
Query: 265 VGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHS 107
S+AR H GTG+GL+IS+ LV M G IG S+P GS F FT L A S
Sbjct: 586 ADNSMARRHEGTGLGLAISRELVEAMGGTIGVRSEPGTGSLFWFTLCLRHAQS 638
>ref|ZP_00533448.1| ATP-binding region, ATPase-like:Histidine kinase A,
N-terminal:Histidine kinase [Chlorobium phaeobacteroides
BS1]
gb|EAM62187.1| ATP-binding region, ATPase-like:Histidine kinase A,
N-terminal:Histidine kinase [Chlorobium phaeobacteroides
BS1]
Length = 721
Score = 76.3 bits (186), Expect = 7e-13
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
ASD + L+ SV DTG+GIP + + +F F Q+ + AR GTG+GL+ISK LV LMRG
Sbjct: 575 ASDHLILLFSVTDTGIGIPKEKFNLLFKSFSQIDSTSARQFDGTGLGLAISKQLVNLMRG 634
Query: 181 EIGFASKPQVGSTFTFTAVLTRA 113
+I S+ GSTF+FT T+A
Sbjct: 635 DIWVESEVNKGSTFSFTIRTTKA 657
>ref|ZP_00860356.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Bradyrhizobium sp. BTAi1]
gb|EAP29708.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Bradyrhizobium sp. BTAi1]
Length = 729
Score = 76.3 bits (186), Expect = 7e-13
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+A +++L+ SV DTGVGIP +A R+F F QV SI+R GGTG+GL+I K LV M
Sbjct: 485 LAGPNLTLVFSVADTGVGIPAEAVGRLFRQFSQVDNSISRRFGGTGLGLAICKRLVTCMG 544
Query: 184 GEIGFASKPQVGSTFTFT 131
G+I SK GSTFTF+
Sbjct: 545 GDIKVQSKIGEGSTFTFS 562
>gb|ABB31996.1| histidine kinase [Geobacter metallireducens GS-15]
ref|YP_384721.1| histidine kinase [Geobacter metallireducens GS-15]
Length = 462
Score = 75.9 bits (185), Expect = 1e-12
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+AS + LI +++DTG+GIP D +F + Q P+ R +GGTG+GL+I+K LVGLM
Sbjct: 236 LASQEMQLIFTIQDTGIGIPGDKLEEIFERYAQASPATFRTYGGTGLGLNIAKRLVGLMG 295
Query: 184 GEIGFASKPQVGSTFTFTAVL 122
G I SK G++F F A L
Sbjct: 296 GTIRVTSKEGKGTSFVFNARL 316
>dbj|BAB50602.1| Hybrid sensory histidine kinase [Mesorhizobium loti MAFF303099]
ref|NP_104816.1| Hybrid sensory histidine kinase [Mesorhizobium loti MAFF303099]
Length = 786
Score = 75.9 bits (185), Expect = 1e-12
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D + L + VEDTG+GIP + VF F QV S R H GTG+GL+I+ LV LM G+
Sbjct: 385 NDVVQLRLRVEDTGIGIPAEKLQNVFEKFAQVDGSSTRRHEGTGLGLAIAARLVDLMAGK 444
Query: 178 IGFASKPQVGSTFTFTAVLTRAHS-SRNENKSSEFKGINALVVDHRPVRAKV 26
IG S+ GS F F L H+ +R + G LV+D PV ++
Sbjct: 445 IGVESEIGRGSVFWFAVPLPVHHAEAREAIVPVDVTGARVLVIDDNPVNREI 496
>gb|AAZ64391.1| PAS [Ralstonia eutropha JMP134]
ref|YP_299235.1| PAS [Ralstonia eutropha JMP134]
Length = 855
Score = 75.9 bits (185), Expect = 1e-12
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = -2
Query: 370 APIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGL 191
AP D + +ED G+G+P DA + +F PF+Q + R GGTG+GL+I + L L
Sbjct: 375 APAGGDVVRF--EIEDNGIGMPPDAMATLFQPFVQAETTTTRRFGGTGLGLAICRRLTEL 432
Query: 190 MRGEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD-HRPVRAKVTRYL 14
M G I AS+P G+TFT L A + + + G++ L++D P R V RYL
Sbjct: 433 MGGSIAAASQPGAGATFTVCLPLRAAEAPL--PRPTPISGVHCLLIDIAEPQRTTVARYL 490
>gb|AAO07892.1| FOG: CheY-like receiver [Vibrio vulnificus CMCP6]
ref|NP_762902.1| FOG: CheY-like receiver [Vibrio vulnificus CMCP6]
Length = 1320
Score = 75.9 bits (185), Expect = 1e-12
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = -2
Query: 397 ELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGL 218
E+ S MP + +SD ++L SV+DTG+GI + + +F F Q SI R GGTG+GL
Sbjct: 734 EILVSVMPESQ-SSDDVTLRFSVKDTGIGIDKEKIADLFNAFSQADTSITREFGGTGLGL 792
Query: 217 SISKCLVGLMRGEIGFASKPQVGSTFTFT--AVLTRAHSSRNENKSSEFKGINALVVD 50
SISK LV LM G++ +S +GSTFTFT L A S G AL+VD
Sbjct: 793 SISKQLVELMGGQLSVSSAVGMGSTFTFTIHCGLQEAKMRDIAKPISGLAGKRALIVD 850
>ref|ZP_00585281.1| PAS [Shewanella amazonensis SB2B]
gb|EAN40471.1| PAS [Shewanella amazonensis SB2B]
Length = 1763
Score = 75.9 bits (185), Expect = 1e-12
Identities = 44/112 (39%), Positives = 62/112 (55%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L +V D+G+G+ + Q+++F F Q S R +GGTG+GL+I K LV LM GEI
Sbjct: 1185 DQVQLKFAVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEI 1244
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
G S+ GSTF FT V + + N E +G+ LVVD + R
Sbjct: 1245 GVDSQFGNGSTFYFT-VSVKVAQNAQLNVEQELEGMAVLVVDDNSTARDILR 1295
>gb|AAK25064.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
ref|NP_421896.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
Length = 560
Score = 75.9 bits (185), Expect = 1e-12
Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+SV DTGVG+ + R+FTPF Q SIAR GGTG+GLSI + L LM GEI +S+P
Sbjct: 336 LSVTDTGVGMTAEQIGRLFTPFAQGDASIARRFGGTGLGLSICRQLAELMAGEIIVSSEP 395
Query: 157 QVGSTFTFTAVLTRAH---SSRNENKSSEFKGINALVVDHRPVRAKVTR 20
VGSTFT L A ++ ++ G LVVD V V R
Sbjct: 396 GVGSTFTVRLGLPAAAPLVAAPARAAVTQLDGARVLVVDDNLVNQTVAR 444
>dbj|BAC97498.1| sensory box sensor histidine kinase/response regulator [Vibrio
vulnificus YJ016]
ref|NP_937528.1| sensory box sensor histidine kinase/response regulator [Vibrio
vulnificus YJ016]
Length = 1328
Score = 75.9 bits (185), Expect = 1e-12
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = -2
Query: 397 ELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGL 218
E+ S MP + +SD ++L SV+DTG+GI + + +F F Q SI R GGTG+GL
Sbjct: 742 EILVSVMPESQ-SSDDVTLRFSVKDTGIGIDKEKIADLFNAFSQADTSITREFGGTGLGL 800
Query: 217 SISKCLVGLMRGEIGFASKPQVGSTFTFT--AVLTRAHSSRNENKSSEFKGINALVVD 50
SISK LV LM G++ +S +GSTFTFT L A S G AL+VD
Sbjct: 801 SISKQLVELMGGQLSVSSAVGMGSTFTFTIHCGLQEAKMRDIAKPISGLAGKRALIVD 858
>gb|AAZ47736.1| PAS [Dechloromonas aromatica RCB]
ref|YP_286206.1| PAS [Dechloromonas aromatica RCB]
Length = 1560
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/81 (50%), Positives = 52/81 (64%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+ D I + +V DTG+GI DAQ ++F PF Q S R +GGTG+GL+IS+ L M G
Sbjct: 1131 SGDGILIRCAVSDTGIGIASDAQRKLFVPFEQGDASTTRRYGGTGLGLAISRRLAEAMHG 1190
Query: 181 EIGFASKPQVGSTFTFTAVLT 119
EIG SK GSTF FTA L+
Sbjct: 1191 EIGVDSKLGQGSTFWFTARLS 1211
>gb|ABB37345.1| periplasmic sensor hybrid histidine kinase [Desulfovibrio
desulfuricans G20]
ref|YP_387040.1| periplasmic sensor hybrid histidine kinase [Desulfovibrio
desulfuricans G20]
Length = 981
Score = 75.5 bits (184), Expect = 1e-12
Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+ D + L SV DTG+GI +A++R+F F Q S AR+ GG+G+GLSI++ LV LM G
Sbjct: 415 SQDVVQLEFSVRDTGLGIGEEARNRLFDTFSQAEGSTARLFGGSGLGLSIARELVRLMGG 474
Query: 181 EIGFASKPQVGSTFTFT---AVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
I AS+P GS F FT ++ A +R+ +G LV D+ R +TR L
Sbjct: 475 TITVASEPGKGSDFRFTGRFSLPVEAVEARHHRTGEAPRGRVLLVEDNESNRLVMTRML 533
>ref|ZP_00988487.1| signal transduction histidine kinase [Vibrio splendidus 12B01]
gb|EAP96288.1| signal transduction histidine kinase [Vibrio splendidus 12B01]
Length = 574
Score = 75.5 bits (184), Expect = 1e-12
Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
S I+VEDTG+GI S +F+PF+Q +I R GGTG+GL+I+K LV LMRG I
Sbjct: 356 SFYITVEDTGIGISSQQLSSLFSPFVQADSTITRRFGGTGLGLAITKRLVELMRGRISVE 415
Query: 166 SKPQVGSTFTF-TAVLTR-----AHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
S+P GS F VLTR AH +++ + LVV+ P V + +
Sbjct: 416 SEPGKGSKFEVQLPVLTRVTNNLAHCEEDKSSRELRSRYSVLVVEDNPTNQMVIKLI 472
>ref|YP_476763.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
gb|ABD01500.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
Length = 1526
Score = 75.5 bits (184), Expect = 1e-12
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L +SV DTG+GIP AQS++F PF QV S R +GGTG+GL+I K L LM G I S
Sbjct: 1001 LKLSVRDTGIGIPAAAQSKLFQPFSQVDASTTRKYGGTGLGLAICKQLTELMGGTISLQS 1060
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSS-----EFKGINALVVDHRPVRAKVTR 20
+ GSTF+ L R + ++ S + +G L VD K+ R
Sbjct: 1061 QEGQGSTFSVELTLERQPYVQQLSQPSARIPVDLQGKRLLAVDDNATNRKILR 1113
>gb|EAN29480.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606096.1| PAS [Magnetococcus sp. MC-1]
Length = 1101
Score = 75.5 bits (184), Expect = 1e-12
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
ASD L V DTG+GI + ++F F Q SI R +GGTG+GLSISK LVG+M G
Sbjct: 747 ASDQQELCFRVVDTGIGISEAHRDKLFHAFSQADGSITRQYGGTGLGLSISKHLVGMMGG 806
Query: 181 EIGFASKPQVGSTFTFTAVL 122
IGF S VGSTF FT L
Sbjct: 807 TIGFESCQGVGSTFWFTLPL 826
>gb|AAZ48763.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_287233.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 659
Score = 75.5 bits (184), Expect = 1e-12
Identities = 42/97 (43%), Positives = 54/97 (55%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
++ + +SV DTG+GI +A R+F PF Q S R +GGTG+GL I + LV LM GEI
Sbjct: 422 AVHIELSVRDTGIGIAPEAIGRIFNPFEQADGSTTRKYGGTGLGLPICQRLVRLMGGEIQ 481
Query: 172 FASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINA 62
S P GS FTFT L RA + G+ A
Sbjct: 482 VVSTPGAGSEFTFTVRLQRAEPLHAPTVEAHNDGVEA 518
>gb|AAZ44799.1| PAS [Dechloromonas aromatica RCB]
ref|YP_283269.1| PAS [Dechloromonas aromatica RCB]
Length = 1193
Score = 75.5 bits (184), Expect = 1e-12
Identities = 51/111 (45%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L I V+DTGVG+ + Q +F F Q SI R +GGTG+GL+I K L LMRG+I S
Sbjct: 711 LEIDVQDTGVGMSQEQQQVLFQAFSQADSSITRKYGGTGLGLTICKRLAQLMRGDIWVTS 770
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPV-RAKVTRYL 14
+ VGSTFTFT L + N S+ + ALVVD P+ RA + R L
Sbjct: 771 QSGVGSTFTFTVNLGLSTLEANPPLSAMRR---ALVVDDSPLARAILIRLL 818
>ref|ZP_00591131.1| PAS [Prosthecochloris aestuarii DSM 271]
gb|EAN23501.1| PAS [Prosthecochloris aestuarii DSM 271]
Length = 1040
Score = 75.5 bits (184), Expect = 1e-12
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L + DTG+GI + +F F Q+ S R +GGTG+GLSI+K LV LM+G I
Sbjct: 664 DQVVLRFCIRDTGIGIAKEKIDTLFEKFTQIDASATRQYGGTGLGLSIAKDLVELMQGSI 723
Query: 175 GFASKPQVGSTFTFTAVL---TRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
G S GS F FTA L T A E+K+ G AL+VD ++
Sbjct: 724 GVESTVNQGSLFWFTAKLNRQTHATLQAQESKNRSLFGQKALIVDDNATNREI 776
>ref|ZP_00054637.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 968
Score = 75.1 bits (183), Expect = 2e-12
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ + I V DTG+GI + R+F PF Q S R GGTG+GLSI++ LV LM G GF
Sbjct: 607 VMVSIRVVDTGIGIEDALRDRLFQPFTQAESSTTRRFGGTGLGLSITRRLVDLMDGTAGF 666
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSE----FKGINALVVD 50
S+P VGS+F L A + +N + + F G+ L+VD
Sbjct: 667 ESEPNVGSSFWCRLPLPTAEDAAPDNLAEQTEAAFMGLRILIVD 710
>gb|AAA20829.1| pectate lyase
Length = 896
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/99 (42%), Positives = 56/99 (56%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q SI+R GGTG+GL ISK L+ M GEIG S
Sbjct: 416 LRISVQDTGIGLSSQDVRALFQAFSQADNSISRQPGGTGLGLVISKRLIEQMGGEIGVDS 475
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A R E + +G+ A V++H
Sbjct: 476 TPGEGSEFWISLNLPKAREDREETANQALEGLRAAVLEH 514
>dbj|BAE50121.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_420680.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 1018
Score = 75.1 bits (183), Expect = 2e-12
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L I V DTG+GI + R+F PF Q S R GGTG+GLSI++ LV LM G GF S
Sbjct: 659 LSIRVADTGIGIDSSLRDRLFQPFTQAESSTTRRFGGTGLGLSITRRLVDLMDGTAGFES 718
Query: 163 KPQVGSTFTFTAVLTRAHSSRNE----NKSSEFKGINALVVD 50
+P VGS+F L A S E ++++F G+ L+VD
Sbjct: 719 EPGVGSSFWCRLPLPVAESVPPETPIGEQTTDFIGLRILIVD 760
>gb|AAZ48415.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_286885.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 620
Score = 75.1 bits (183), Expect = 2e-12
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V DTG+G+ + +FTPF Q S R GGTG+GLSIS+ L+ LM GEI S+P V
Sbjct: 402 VRDTGIGMTPGVVNALFTPFFQADLSNTRRFGGTGLGLSISRRLIELMHGEISAESEPDV 461
Query: 151 GSTFTFTAVLTRAHSSRNENKSSE------FKGINALVVDHRPVRAKV 26
GSTF F V +S E + + F LVVD R + KV
Sbjct: 462 GSTFRFHIVADLPETSVAEEQPQKADGERHFDARRILVVDDRQINRKV 509
>gb|EAN29352.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606196.1| PAS [Magnetococcus sp. MC-1]
Length = 927
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ ++ V DTG+GIP QS VF F Q+ S R +GGTG+GL+ISK L LM G++G
Sbjct: 560 VEIVFRVIDTGIGIPESKQSVVFDAFKQLDSSTQRRYGGTGLGLTISKKLADLMGGQLGL 619
Query: 169 ASKPQVGSTFTFTAVLTRA--HSSRNENKSSEFKGINALVVDHRPVR 35
S+ GSTFT + L+R+ S + + F G++ L+ P++
Sbjct: 620 KSQEGHGSTFTLSLRLSRSTGPSKSSAQPAPIFAGMHILIWHTHPIK 666
>ref|ZP_00505065.1| PAS [Clostridium thermocellum ATCC 27405]
gb|EAM45912.1| PAS [Clostridium thermocellum ATCC 27405]
Length = 902
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
DS+ L +V DTG+GI D + +F F QV SI R +GGTG+GL+ISK LV +M GEI
Sbjct: 563 DSVKLKFTVSDTGIGIDGDKMNMLFKSFSQVDSSITRKYGGTGLGLAISKQLVEMMGGEI 622
Query: 175 GFASKPQVGSTFTFTAVLTRAHSS 104
S+ GSTF FTA R S
Sbjct: 623 WVESQKGKGSTFYFTAGFKRKAKS 646
>ref|ZP_00837289.1| PAS [Shewanella sp. PV-4]
gb|EAP02786.1| PAS [Shewanella sp. PV-4]
Length = 1042
Score = 75.1 bits (183), Expect = 2e-12
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
S + L VEDTG+GI + + +F PF+QV S R+ GGTG+GLSI+K L LM+GE
Sbjct: 555 SGEVLLSCEVEDTGIGIAKEKLAMLFNPFIQVDSSTTRMFGGTGLGLSIAKRLCELMQGE 614
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSR 101
I S+ +VGS F+FT A S +
Sbjct: 615 IKVRSQQEVGSIFSFTLTQQLADSDK 640
>ref|ZP_00659124.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Nocardioides
sp. JS614]
gb|EAO06092.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Nocardioides
sp. JS614]
Length = 847
Score = 75.1 bits (183), Expect = 2e-12
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A + + V DTG+G+ + R+F PF Q S R +GGTG+GL+IS+ LV M G
Sbjct: 487 AEAGVVVRFEVTDTGIGVEEADRERLFEPFSQADSSTTRRYGGTGLGLAISEHLVTAMGG 546
Query: 181 EIGFASKPQVGSTFTFTAVLTRAH--SSRNENKSSEFKGINALVVD 50
+IG S+P +GSTF FT L A S+ + + G+ LVVD
Sbjct: 547 QIGVDSRPGLGSTFWFTLPLGLAEDLSASTPRGTEDIAGLRVLVVD 592
>gb|EAN71793.1| PAS [Shewanella denitrificans OS217]
ref|ZP_00633951.1| PAS [Shewanella denitrificans OS-217]
Length = 1233
Score = 75.1 bits (183), Expect = 2e-12
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
ISL V DTG+GI + Q+ +F F Q S R +GGTG+GLSISK LV +M G +
Sbjct: 872 ISLKFWVRDTGIGISREQQANLFDAFSQADGSTTRQYGGTGLGLSISKHLVSMMGGNLSV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRP 41
S+PQ GSTF+FT A + + + +LVVD P
Sbjct: 932 ESEPQQGSTFSFTLSFDIAKELPQQPLVVPKQLNNLTSLVVDDNP 976
>ref|ZP_00762422.1| COG0642: Signal transduction histidine kinase [Vibrio sp. Ex25]
Length = 573
Score = 75.1 bits (183), Expect = 2e-12
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++ L+IS+ DTG+GI Q +FT F Q SI R GGTG+GL+I+K LV +MR
Sbjct: 355 VSEQDTELVISISDTGIGISKAKQEHLFTAFHQGDRSITRRFGGTGLGLAITKHLVEMMR 414
Query: 184 GEIGFASKPQVGSTFTF-TAVLTRAHSSR--NENKSSEFKGINALVVD 50
G+I S VGSTFT VLTR + +R + K ++ LVV+
Sbjct: 415 GKIIVKSDEHVGSTFTIKIPVLTRCNQNRPVKIENNQPTKAMDLLVVE 462
>ref|ZP_00660379.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Nocardioides
sp. JS614]
gb|EAO04824.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Nocardioides
sp. JS614]
Length = 836
Score = 74.7 bits (182), Expect = 2e-12
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V DTG+GIP AQ+R+F F Q S R +GGTG+GL+IS+ LV LM G IGF S+
Sbjct: 249 VVDTGIGIPQAAQARLFRSFTQAEASTTRRYGGTGLGLAISRRLVRLMGGTIGFESQEGH 308
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEFKGI----NALVVDHRPVRAKV 26
GSTF F LT A + + + +GI AL+VD + +V
Sbjct: 309 GSTFWFAVPLTAADLDTSRD-ADPARGIPADARALLVDDNATQRRV 353
>gb|AAR29885.1| putative histidine kinase HHK6p [Cochliobolus heterostrophus]
Length = 1364
Score = 74.7 bits (182), Expect = 2e-12
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+++++ S+ DTG+GI + + R+F PF Q S AR GGTG+GL+ISK LV LM+G+I
Sbjct: 886 ETVTVNFSIVDTGIGIEEEVRKRLFQPFSQADSSTARRFGGTGLGLTISKNLVELMKGQI 945
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNEN 92
SK G+T TF TRA S E+
Sbjct: 946 WLDSKLGQGTTATFWIPFTRAPSQDGES 973
>dbj|BAC88659.1| two-component hybrid sensor and regulator [Gloeobacter violaceus
PCC 7421]
ref|NP_923664.1| two-component hybrid sensor and regulator [Gloeobacter violaceus
PCC 7421]
Length = 856
Score = 74.7 bits (182), Expect = 2e-12
Identities = 46/124 (37%), Positives = 58/124 (46%)
Frame = -2
Query: 484 TGTQSANTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGIP 305
+G S N + P A + WE L +V DTG+GIP
Sbjct: 618 SGAVSVNVTAARPAAEPPQKWE-------------------------LHFAVRDTGIGIP 652
Query: 304 FDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAV 125
+ R+F PF QV S R +GGTG+GL+I K L LM G I S+P GSTF+FT V
Sbjct: 653 AERMDRLFKPFSQVDASTTRRYGGTGLGLAICKRLAELMDGRIWVESEPGRGSTFSFTIV 712
Query: 124 LTRA 113
A
Sbjct: 713 AAAA 716
>ref|ZP_00530683.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
gb|EAM64926.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
Length = 673
Score = 74.7 bits (182), Expect = 2e-12
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+SL +SV+DTG+GIP + Q +F PF Q+ S R GGTG+GL+I + L+ M GEI
Sbjct: 439 VSLKVSVQDTGIGIPEEQQHLIFNPFTQIDASSTRKEGGTGLGLAIVRKLIAFMGGEIQV 498
Query: 169 ASKPQVGSTFTFT 131
S + GSTF+FT
Sbjct: 499 TSSERDGSTFSFT 511
>emb|CAA65047.1| putative sensor kinase [Synechocystis sp.]
Length = 1138
Score = 74.7 bits (182), Expect = 2e-12
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
+ ++ DTG+GIP D Q R+F F QV S R +GGTG+GL IS+ L +M G + S
Sbjct: 942 ICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTS 1001
Query: 163 KPQVGSTFTFTAVLT-RAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
+P VGS F F + T +A + + + KG L+VD ++
Sbjct: 1002 EPGVGSNFRFCILTTAQAPALAEADSVQQMKGKQVLIVDDNETNRRI 1048
>dbj|BAB50556.1| Hybrid sensory histidine kinase [Mesorhizobium loti MAFF303099]
ref|NP_104770.1| Hybrid sensory histidine kinase [Mesorhizobium loti MAFF303099]
Length = 1391
Score = 74.7 bits (182), Expect = 2e-12
Identities = 46/107 (42%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV DTG+GIP + VF F QV S R H GTG+GL+I+ LV LM G IG S
Sbjct: 991 LTISVTDTGIGIPEEKLKLVFEKFSQVDTSSTRRHEGTGLGLAITSRLVELMGGTIGVES 1050
Query: 163 KPQVGSTFTFTAVLTRAHSSRNEN-KSSEFKGINALVVDHRPVRAKV 26
GSTF FT L RA + + G L+VD V +
Sbjct: 1051 AEGKGSTFWFTVTLPRAGQQNGQRIMPVDVTGARVLIVDDNAVNRAI 1097
>dbj|BAA17056.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
ref|NP_440376.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
Length = 1462
Score = 74.7 bits (182), Expect = 2e-12
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
+ ++ DTG+GIP D Q R+F F QV S R +GGTG+GL IS+ L +M G + S
Sbjct: 942 ICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTS 1001
Query: 163 KPQVGSTFTFTAVLT-RAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
+P VGS F F + T +A + + + KG L+VD ++
Sbjct: 1002 EPGVGSNFRFCILTTAQAPALAEADSVQQMKGKQVLIVDDNETNRRI 1048
>ref|YP_217885.1| sensory histidine kinase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gb|AAX66804.1| sensory histidine kinase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>gb|AAL21838.1| sensory histidine kinase [Salmonella typhimurium LT2]
gb|AAF34823.1| BarA sensor kinase [Salmonella typhimurium]
ref|NP_461879.1| sensor histidine kinase [Salmonella typhimurium LT2]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>gb|AAV78673.1| sensor protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
ref|YP_151985.1| sensor protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>emb|CAD06072.1| sensor protein [Salmonella enterica subsp. enterica serovar Typhi]
gb|AAO70423.1| sensor protein [Salmonella enterica subsp. enterica serovar Typhi
Ty2]
ref|NP_457354.1| sensor protein [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
ref|NP_806563.1| sensor protein [Salmonella enterica subsp. enterica serovar Typhi
Ty2]
pir||AI0860 sensor protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>dbj|BAA16571.2| hybrid sensory histidine kinase, in two-component regulatory system
with UvrY [Escherichia coli W3110]
gb|AAC75828.1| hybrid sensory histidine kinase, in two-component regulatory system
with UvrY [Escherichia coli K12]
ref|YP_311777.1| sensor-regulator, activates OmpR by phophorylation [Shigella sonnei
Ss046]
ref|YP_404517.1| sensor-regulator [Shigella dysenteriae Sd197]
ref|AP_003352.1| hybrid sensory histidine kinase, in two-component regulatory system
with UvrY [Escherichia coli W3110]
gb|AAN81797.1| Sensor protein barA [Escherichia coli CFT073]
dbj|BAB37069.1| sensor-regulator protein barA [Escherichia coli O157:H7]
ref|NP_417266.1| hybrid sensory histidine kinase in two-component regulatory system
with UvrY [Escherichia coli K12]
ref|NP_311673.1| BarA [Escherichia coli O157:H7]
sp|P0AEC5|BARA_ECOLI Sensor protein barA
sp|P0AEC6|BARA_ECOL6 Sensor protein barA
sp|P0AEC7|BARA_ECO57 Sensor protein barA
ref|NP_755227.1| Sensor protein barA [Escherichia coli CFT073]
gb|ABB63026.1| sensor-regulator [Shigella dysenteriae Sd197]
ref|ZP_00734532.1| COG0642: Signal transduction histidine kinase [Escherichia coli
53638]
ref|ZP_00718437.1| COG0642: Signal transduction histidine kinase [Escherichia coli
E110019]
ref|ZP_00714910.1| COG0642: Signal transduction histidine kinase [Escherichia coli
B7A]
ref|ZP_00712618.1| COG0642: Signal transduction histidine kinase [Escherichia coli
B171]
ref|ZP_00706827.1| COG0642: Signal transduction histidine kinase [Escherichia coli HS]
ref|ZP_00700781.1| COG0642: Signal transduction histidine kinase [Escherichia coli
E24377A]
ref|ZP_00696496.1| COG0642: Signal transduction histidine kinase [Shigella boydii
BS512]
ref|ZP_00923614.1| COG0642: Signal transduction histidine kinase [Escherichia coli
101-1]
gb|AAZ89542.1| sensor-regulator, activates OmpR by phophorylation [Shigella sonnei
Ss046]
dbj|BAA01710.1| sensor-regulator protein [Escherichia coli]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>gb|AAN44287.1| sensor-regulator [Shigella flexneri 2a str. 301]
gb|AAP18112.1| sensor-regulator [Shigella flexneri 2a str. 2457T]
ref|NP_838302.1| sensor-regulator [Shigella flexneri 2a str. 2457T]
ref|NP_708580.1| sensor-regulator [Shigella flexneri 2a str. 301]
sp|P59342|BARA_SHIFL Sensor protein barA
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>ref|YP_409032.1| sensor-regulator [Shigella boydii Sb227]
gb|ABB67204.1| sensor-regulator [Shigella boydii Sb227]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>gb|AAG57899.1| sensor-regulator, activates OmpR by phophorylation [Escherichia
coli O157:H7 EDL933]
ref|NP_289340.1| sensor-regulator, activates OmpR by phophorylation [Escherichia
coli O157:H7 EDL933]
pir||G85929 hypothetical protein barA [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>ref|ZP_00728469.1| COG0642: Signal transduction histidine kinase [Escherichia coli
E22]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>ref|ZP_00725643.1| COG0642: Signal transduction histidine kinase [Escherichia coli
F11]
Length = 918
Score = 74.3 bits (181), Expect = 3e-12
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+++ + + + + DTG+GIP QSR+F F Q SI+R HGGTG+GL I++ LV M
Sbjct: 438 LSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMG 497
Query: 184 GEIGFASKPQVGSTFTF 134
G+I F S+P GSTF F
Sbjct: 498 GDISFHSQPNRGSTFWF 514
>ref|ZP_01056736.1| Hybrid sensory histidine kinase [Roseobacter sp. MED193]
gb|EAQ45388.1| Hybrid sensory histidine kinase [Roseobacter sp. MED193]
Length = 763
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
S++ SL I V DTG+GIP + VF+ F QV R GTG+GL+IS L+ LM GE
Sbjct: 386 SENYSLTIKVADTGIGIPANRLEAVFSAFEQVDSGATRSFEGTGLGLAISARLLALMGGE 445
Query: 178 IGFASKPQVGSTFTFTAVLTRAHS-SRNENKSSEFKGINALVVD 50
+ ASK GS FT L RA + ++ F+G+ L+VD
Sbjct: 446 VAVASKAGEGSIFTVQLPLPRAERVGEIKVNTTAFQGLTGLIVD 489
>gb|EAN28038.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
ref|ZP_00607570.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
Length = 662
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A ++ L SV DTG+GIP Q ++F PF Q SI R GGTG+GL+I++ L+ M+G
Sbjct: 416 ALENDRLSFSVSDTGIGIPSSLQEKIFLPFQQADSSITRKFGGTGLGLAITQSLIVQMQG 475
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNE--NKSSEFKGINALVVDHR 44
+ S GSTFTF L +N N SS+ I + VD R
Sbjct: 476 NLSVESHEGTGSTFTFDLPLPETDPPQNHLLNSSSD-NSIASPAVDRR 522
>gb|EAN26742.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
ref|ZP_00608844.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
Length = 662
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A ++ L SV DTG+GIP Q ++F PF Q SI R GGTG+GL+I++ L+ M+G
Sbjct: 416 ALENDRLSFSVSDTGIGIPSSLQEKIFLPFQQADSSITRKFGGTGLGLAITQSLIVQMQG 475
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNE--NKSSEFKGINALVVDHR 44
+ S GSTFTF L +N N SS+ I + VD R
Sbjct: 476 NLSVESHEGTGSTFTFDLPLPETDPPQNHLLNSSSD-NSIASPAVDRR 522
>gb|ABA57772.1| Hybrid signal transduction histidine kinase and diguanylate
cyclase/phosphodiesterase [Nitrosococcus oceani ATCC
19707]
ref|YP_343302.1| Hybrid signal transduction histidine kinase and diguanylate
cyclase/phosphodiesterase [Nitrosococcus oceani ATCC
19707]
Length = 1499
Score = 74.3 bits (181), Expect = 3e-12
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = -2
Query: 388 SSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSIS 209
S E+ ++ + L V DTG+GIP + ++RVF F Q S R +GGTG+GL+I
Sbjct: 410 SIEVSLLEKKAEKLVLHFEVRDTGIGIPVEFRARVFEAFSQADSSTTRKYGGTGLGLAIC 469
Query: 208 KCLVGLMRGEIGFASKPQVGSTFTFTAVL--TRAHSSRNENKSSEFKGINALVVDH 47
+ LV LM G+IG S GS F FTA L T A + + G+ L+VD+
Sbjct: 470 RQLVDLMGGDIGVESGSGKGSIFWFTAPLEETSAPQEFQVSNKTGVAGLRLLIVDN 525
>gb|AAK25037.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
ref|NP_421869.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
Length = 850
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Frame = -2
Query: 367 PIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLM 188
P A D + + + V DTG+G+ +++F PF Q S R GGTG+GL+I++ LV +M
Sbjct: 609 PEAGDRVRVRLRVADTGIGMNAATVAKLFRPFTQADASTTRNFGGTGLGLNITRRLVEMM 668
Query: 187 RGEIGFASKPQVGSTFTFTAVL----------TRAHSSRNENKSSEFKGINALVVDHRPV 38
RG+I S+ VGS FT V+ + A ++ ++ +G LVVD PV
Sbjct: 669 RGDIQVESEEGVGSVFTIEMVMDQALAIEAAPSEAGATSESIGAAALQGRRVLVVDDHPV 728
Query: 37 RAKVTR 20
+V R
Sbjct: 729 NRRVIR 734
>gb|EAN28230.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
ref|ZP_00607367.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
Length = 920
Score = 74.3 bits (181), Expect = 3e-12
Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V D+G+G+ R+F F Q S R +GG+G+GLSI K LVG+M G+I S+P
Sbjct: 316 VRDSGIGMTKQQIDRLFQAFSQADSSTTRRYGGSGLGLSICKRLVGMMDGDIWVESQPGR 375
Query: 151 GSTFTFTAVLTRAHSSRNENK--SSEFKGINALVVDHRPV 38
GS FTFTA L R + S G+ LVVD PV
Sbjct: 376 GSQFTFTAQLVSQRQDRRRFRLPSMHLVGLRVLVVDDNPV 415
>gb|AAZ45761.1| ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
[Dechloromonas aromatica RCB]
ref|YP_284231.1| ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
[Dechloromonas aromatica RCB]
Length = 497
Score = 74.3 bits (181), Expect = 3e-12
Identities = 39/95 (41%), Positives = 56/95 (58%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+ D++ +V D G+GI + RVF F QV S +R +GG G+GL+I K L LM
Sbjct: 400 VPGDAVLCRFAVSDNGIGISPEKLDRVFNSFEQVDGSFSRAYGGLGLGLAICKQLAELMG 459
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE 80
G++G SKP VGSTF FT L + S+ + S++
Sbjct: 460 GKVGAVSKPGVGSTFWFTVRLLKDSSTASARSSAQ 494
>gb|AAZ47676.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_286146.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 777
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ + + V DTG+GI + Q R+F F Q S R +GGTG+GL+I+ + M GE
Sbjct: 536 EDVLIRFEVRDTGIGIAPEVQKRLFKAFEQADGSTTRQYGGTGLGLAITAKIAAAMGGET 595
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKS-----------SEFKGINALVVDHRPVRAK 29
G S+ GSTF FTA L +A E +F GI L+VD P+ +
Sbjct: 596 GLESEIGNGSTFWFTARLRKAILGSQEAHQEPTCGAEQGLLKDFAGIRVLLVDDEPINRE 655
Query: 28 VTRYL 14
+T+ L
Sbjct: 656 ITQIL 660
>gb|EAN26968.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
ref|ZP_00608609.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
Length = 1166
Score = 74.3 bits (181), Expect = 3e-12
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L SV+DTG+GI + Q R+F F Q SI+R +GGTG+GL+ISK LV LM G + S
Sbjct: 588 LHFSVQDTGIGISAEQQKRLFQSFSQADSSISRRYGGTGLGLAISKKLVELMGGTLSLQS 647
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKS-SEFKGINALVVD 50
G+TF FT L +E S + G+ LVVD
Sbjct: 648 VVGQGTTFEFTIPLQAVEIKPDEVPSATSLNGVRVLVVD 686
>ref|ZP_01134009.1| sensor histidine kinase with multiple PAS/PAC and a response
regulator receiver domain [Pseudoalteromonas tunicata
D2]
gb|EAR28201.1| sensor histidine kinase with multiple PAS/PAC and a response
regulator receiver domain [Pseudoalteromonas tunicata
D2]
Length = 901
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/105 (41%), Positives = 60/105 (57%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
S L ISV DTG+GI DA R+F F Q S R +GGTG+GLSIS+ L+ LM+GEI
Sbjct: 682 SNGLQISVIDTGIGIAPDAIERLFNRFEQADKSTTRKYGGTGLGLSISQSLIDLMQGEIS 741
Query: 172 FASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPV 38
S+ G++F+ L +AH +N I L +DH+ +
Sbjct: 742 VTSEENKGTSFSIMIPLVQAHVQQNTPPHV----ITQLNLDHKTI 782
>ref|ZP_00244380.1| COG0642: Signal transduction histidine kinase [Rubrivivax
gelatinosus PM1]
Length = 1001
Score = 73.9 bits (180), Expect = 4e-12
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Frame = -2
Query: 400 RELNSSEMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIG 221
R + + A D + + + V DTG+GIP +A SR+F F Q +AR +GGTG+G
Sbjct: 480 RRVEPTAAETALATGDRLWVELCVRDTGIGIPPEALSRLFIAFSQASSGMARRYGGTGLG 539
Query: 220 LSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDH 47
L+IS+ LV LM G I S+P VGS F L+ A S + + + + + LVVD
Sbjct: 540 LAISRQLVELMSGSITVRSQPGVGSRFCVRLPLSPASSDVDVDMLELHDMPALRVLVVDD 599
Query: 46 RPVRAKVTRYLPG 8
V L G
Sbjct: 600 NETNRTVLENLLG 612
>ref|NP_716212.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
gb|AAN53657.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
Length = 1188
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 824 ITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 883
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A ++ E + + LVVD P ++
Sbjct: 884 QSELGVGSTFSFTISFEIAEEAKIEPLVVPEKLNNLRTLVVDDNPTALQI 933
>ref|ZP_00590975.1| PAS [Prosthecochloris aestuarii DSM 271]
gb|EAN23780.1| PAS [Prosthecochloris aestuarii DSM 271]
Length = 991
Score = 73.9 bits (180), Expect = 4e-12
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Frame = -2
Query: 358 SDSISLI-ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
SD+ + I +V DTG+GI + VF PF Q S+ R +GGTG+GLSIS L M
Sbjct: 486 SDATATIRFTVSDTGIGIDSERIEAVFAPFTQADGSMIRKYGGTGLGLSISNQLARKMNS 545
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV-DHRPVR 35
EI S P+ GSTF F+ + + + NE + G ++V D+ P R
Sbjct: 546 EIHVQSSPENGSTFCFSMIFEKQKTQTNERNEALLAGRKVMLVDDYEPCR 595
>ref|ZP_00853304.1| PAS [Shewanella sp. MR-7]
gb|EAP25371.1| PAS [Shewanella sp. MR-7]
Length = 1236
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 872 ITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A ++ E + + LVVD P ++
Sbjct: 932 QSELGVGSTFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQI 981
>ref|ZP_00849114.1| PAS [Shewanella sp. ANA-3]
gb|EAP21589.1| PAS [Shewanella sp. ANA-3]
Length = 1236
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 872 ITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A ++ E + + LVVD P ++
Sbjct: 932 QSELGVGSTFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQI 981
>ref|ZP_00815127.1| PAS [Shewanella putrefaciens CN-32]
gb|EAO93534.1| PAS [Shewanella putrefaciens CN-32]
ref|ZP_00904161.1| PAS [Shewanella sp. W3-18-1]
gb|EAP56029.1| PAS [Shewanella sp. W3-18-1]
Length = 1234
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 872 ITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A ++ E + + LVVD P ++
Sbjct: 932 QSELGVGSTFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQI 981
>ref|ZP_00880979.1| PAS [Shewanella sp. MR-4]
gb|EAP47251.1| PAS [Shewanella sp. MR-4]
Length = 1236
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 872 ITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A ++ E + + LVVD P ++
Sbjct: 932 QSELGVGSTFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQI 981
>ref|NP_716490.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
gb|AAN53935.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
Length = 1765
Score = 73.9 bits (180), Expect = 4e-12
Identities = 45/113 (39%), Positives = 61/113 (53%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D + L SV D+G+G+ + QS++F F Q S R +GGTG+GL+ISK LV LM G
Sbjct: 1187 NDDVVLRFSVRDSGIGLTQEQQSKLFKSFTQADTSTTRKYGGTGLGLAISKQLVELMGGS 1246
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L S + E G++ LV D + R
Sbjct: 1247 IGVESQLGHGSTFFFTVKLC-ISSGQKLFVGQELDGMSILVADDNATARDIMR 1298
>ref|ZP_00419367.1| PAS [Azotobacter vinelandii AvOP]
gb|EAM04350.1| PAS [Azotobacter vinelandii AvOP]
Length = 1030
Score = 73.9 bits (180), Expect = 4e-12
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L V DTG+G+ + ++F F Q S +R +GGTG+GL+I K LV +M GEIG
Sbjct: 440 VRLRFEVRDTGIGLNETQRRKLFRAFTQADSSTSRQYGGTGLGLAICKHLVAMMDGEIGV 499
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRN-ENKSSEFKGINALVVD 50
S P VGSTF F A R + R S++ G+ LVVD
Sbjct: 500 DSSPGVGSTFHFDARFERQANQRELLADSADLLGMRVLVVD 540
>ref|ZP_00581337.1| PAS [Shewanella baltica OS155]
gb|EAN44156.1| PAS [Shewanella baltica OS155]
Length = 1238
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI D Q ++F F Q S R +GGTG+GLSISK LV +M G++
Sbjct: 872 ITLKFWVRDTGIGIGKDQQDKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKV 26
S+ VGSTF+FT A +++ E + + LVVD P ++
Sbjct: 932 QSELGVGSTFSFTISFEIAEAAKIEPLVVPEKLNSLRTLVVDDNPTALQI 981
>dbj|BAE51999.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_422558.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 601
Score = 73.9 bits (180), Expect = 4e-12
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -2
Query: 355 DSISLIISVE--DTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
D ISL++ E D+G+GIP D +F PF Q S R +GGTG+GLS+ + LV +M G
Sbjct: 365 DEISLLLECEVADSGIGIPADRLEAIFEPFTQGDGSTTRRYGGTGLGLSVCRTLVEMMGG 424
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE 80
EI S+P GS F F+A+L A + + + +++E
Sbjct: 425 EITVESQPGRGSVFRFSALLGVAGAPQAQTEATE 458
>dbj|BAE52242.1| Sensor protein gacS [Magnetospirillum magneticum AMB-1]
ref|YP_422801.1| Sensor protein gacS [Magnetospirillum magneticum AMB-1]
Length = 1117
Score = 73.9 bits (180), Expect = 4e-12
Identities = 45/102 (44%), Positives = 56/102 (54%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V DTG+GIP +AQ R+F+ F QV S AR +GGTG+GL+IS+ L LM GE+G S
Sbjct: 636 VRDTGIGIPPEAQGRLFSMFSQVDASTARRYGGTGLGLAISRRLAELMGGEVGVESAVGR 695
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
GS F T L + + G LVVD PV V
Sbjct: 696 GSRFWITLPLELL--APQSAAPPDLSGHRVLVVDDNPVNCDV 735
>ref|ZP_00849349.1| PAS [Shewanella sp. ANA-3]
gb|EAP21013.1| PAS [Shewanella sp. ANA-3]
Length = 1767
Score = 73.9 bits (180), Expect = 4e-12
Identities = 44/113 (38%), Positives = 62/113 (54%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D + L SV D+G+G+ D Q+++F F Q S R +GGTG+GL+I K LV LM G
Sbjct: 1187 NDDVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGT 1246
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L + S + + E +G+ LV D + R
Sbjct: 1247 IGVESQFGHGSTFYFTVKL-QISSGQKLTVAQELEGMPILVADDNATARDIMR 1298
>ref|NP_744030.1| sensor histidine kinase/response regulator [Pseudomonas putida
KT2440]
gb|AAN67494.1| sensor histidine kinase/response regulator [Pseudomonas putida
KT2440]
Length = 785
Score = 73.9 bits (180), Expect = 4e-12
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+ V DTG+GIP DAQ+R+F PF Q G I R +GGTG+GL++++ L M+G + S+P
Sbjct: 454 LEVRDTGIGIPEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEP 513
Query: 157 QVGSTFTFTAVLT 119
GS FT LT
Sbjct: 514 GFGSCFTAELPLT 526
>ref|ZP_00902914.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Pseudomonas
putida F1]
gb|EAP47929.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Pseudomonas
putida F1]
Length = 785
Score = 73.9 bits (180), Expect = 4e-12
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+ V DTG+GIP DAQ+R+F PF Q G I R +GGTG+GL++++ L M+G + S+P
Sbjct: 454 LEVRDTGIGIPEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEP 513
Query: 157 QVGSTFTFTAVLT 119
GS FT LT
Sbjct: 514 GFGSCFTAELPLT 526
>ref|YP_477864.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
gb|ABD02601.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
Length = 1442
Score = 73.9 bits (180), Expect = 4e-12
Identities = 39/74 (52%), Positives = 48/74 (64%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+ V DTG+GIP + R+F PF QV SI+R GGTG+GL+IS+ L LM G IG S+P
Sbjct: 970 VQVRDTGIGIPPEKLDRLFKPFSQVDSSISRQFGGTGLGLAISQRLCQLMGGAIGVESQP 1029
Query: 157 QVGSTFTFTAVLTR 116
GSTF F L R
Sbjct: 1030 GQGSTFRFRIPLKR 1043
>gb|EAN29674.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606017.1| PAS [Magnetococcus sp. MC-1]
Length = 1202
Score = 73.6 bits (179), Expect = 5e-12
Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D+++++ V DTG+GI + R+F F Q S R GGTG+GL+ISK LV LM GE
Sbjct: 689 ADTVTVLTEVRDTGIGIDEAVRPRLFRMFTQADGSTTRRFGGTGLGLAISKQLVELMGGE 748
Query: 178 IGFASKPQVGSTFTFTAVL-TRAHSSRNENKSSEFKGINALVVDHRPV-RAKVTRYL 14
+GF+S GSTF F A + +G+ ALVVD R + RYL
Sbjct: 749 VGFSSVMGQGSTFWFRITFPIVAKAQAVAGGVDSLQGLRALVVDDNATNRNLLGRYL 805
>gb|AAO09997.1| Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
ref|NP_760470.1| Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
Length = 928
Score = 73.6 bits (179), Expect = 5e-12
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+ DSI L V+DTG+GI Q+++F F Q SI+R +GGTG+GL I++ LV M G
Sbjct: 437 SGDSIDLQFMVKDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSQMGG 496
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEF-KGINALVVDHRPVRAKVTR 20
EI S+ GSTF FT L +++ +E+ +G L+V+ A VT+
Sbjct: 497 EISLTSRLHQGSTFWFTLRLHSTQMPMSDSIEAEYLQGKELLLVEPNMQAAAVTQ 551
>gb|AAK54091.2| histidine kinase DhkJ [Dictyostelium discoideum]
Length = 2062
Score = 73.6 bits (179), Expect = 5e-12
Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++ + L SV DTG+GIP D +F F Q SI R +GGTG+GL+IS LV LM+
Sbjct: 1493 LSCGEVVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMK 1552
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE-FKGINALVVDHRPVRAKVTRYL 14
G++ SK GSTF FTA + +S N+ +E ++ L+VD KV + +
Sbjct: 1553 GKLSVVSKSGKGSTFEFTA---QFPTSPNQLPLTEKLNDVHTLIVDDNKSTLKVLKQI 1607
>ref|XP_642053.1| histidine kinase [Dictyostelium discoideum]
gb|EAL68114.1| histidine kinase [Dictyostelium discoideum]
Length = 2062
Score = 73.6 bits (179), Expect = 5e-12
Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++ + L SV DTG+GIP D +F F Q SI R +GGTG+GL+IS LV LM+
Sbjct: 1493 LSCGEVVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMK 1552
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE-FKGINALVVDHRPVRAKVTRYL 14
G++ SK GSTF FTA + +S N+ +E ++ L+VD KV + +
Sbjct: 1553 GKLSVVSKSGKGSTFEFTA---QFPTSPNQLPLTEKLNDVHTLIVDDNKSTLKVLKQI 1607
>emb|CAI89330.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
haloplanktis TAC125]
ref|YP_341776.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
haloplanktis TAC125]
Length = 1585
Score = 73.6 bits (179), Expect = 5e-12
Identities = 40/100 (40%), Positives = 56/100 (56%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L +SV+D+G+GI + Q ++F PFMQV S R +GGTG+GL+ISK L LM G I
Sbjct: 1218 LMLQVSVKDSGIGISKEKQQQLFAPFMQVDASTTREYGGTGLGLAISKQLCELMGGAITI 1277
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
S GS F T + + + G++ LVVD
Sbjct: 1278 KSNAGQGSEFIVTMEVLKGDQQERYMPKANINGLSILVVD 1317
>ref|ZP_00855004.1| PAS [Shewanella sp. MR-7]
gb|EAP23642.1| PAS [Shewanella sp. MR-7]
Length = 1767
Score = 73.6 bits (179), Expect = 5e-12
Identities = 43/113 (38%), Positives = 63/113 (55%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D + L SV D+G+G+ + Q+++F F Q S R +GGTG+GL+I K LV LM G
Sbjct: 1187 NDDVVLRFSVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGT 1246
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L + S + + E +G++ LV D + R
Sbjct: 1247 IGVESQFGHGSTFYFTVKL-QISSGQKLTVAQELEGMSILVADDNATARDIMR 1298
>ref|ZP_00882182.1| PAS [Shewanella sp. MR-4]
gb|EAP46058.1| PAS [Shewanella sp. MR-4]
Length = 1767
Score = 73.6 bits (179), Expect = 5e-12
Identities = 43/113 (38%), Positives = 63/113 (55%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
+D + L SV D+G+G+ + Q+++F F Q S R +GGTG+GL+I K LV LM G
Sbjct: 1187 NDDVVLRFSVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGT 1246
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
IG S+ GSTF FT L + S + + E +G++ LV D + R
Sbjct: 1247 IGVESQFGHGSTFYFTVKL-QISSGQKLTVAQELEGMSILVADDNATARDIMR 1298
>ref|NP_902168.1| probable hybrid sensory kinase [Chromobacterium violaceum ATCC
12472]
gb|AAQ60169.2| probable hybrid sensory kinase [Chromobacterium violaceum ATCC
12472]
Length = 738
Score = 73.6 bits (179), Expect = 5e-12
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L V DTG+G+ + QSR+F F Q S R GGTG+GL+I+K LV LM G +
Sbjct: 163 DKVQLKFCVHDTGIGMSEEQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSM 222
Query: 175 GFASKPQVGSTFTFTAVL--TRAHSSRNENKSSEFKGINALVVD 50
S P GS+F F+ L + SR ++ E +G+ LVVD
Sbjct: 223 LVESAPGWGSSFIFSCWLGVSAETDSRRQSLPKEIRGLRVLVVD 266
>ref|ZP_01133430.1| putative sensor protein [Pseudoalteromonas tunicata D2]
gb|EAR28829.1| putative sensor protein [Pseudoalteromonas tunicata D2]
Length = 1027
Score = 73.6 bits (179), Expect = 5e-12
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A + I L + + DTG+G+ + Q+++F PF Q +IA+ GGTG+GLSIS+ LV L+ G
Sbjct: 666 AQEQIWLEVVITDTGIGLTPEQQAKLFRPFTQAHANIAKNFGGTGLGLSISQQLVQLLGG 725
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
EI S + GSTFTFT R + + F G +V + A++
Sbjct: 726 EITIHSVVEQGSTFTFTVCTERIKIEEPKFRVPLFLGRKIYIVSDKVKSAEI 777
>gb|AAZ47621.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Dechloromonas aromatica RCB]
ref|YP_286091.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Dechloromonas aromatica RCB]
Length = 858
Score = 73.6 bits (179), Expect = 5e-12
Identities = 45/106 (42%), Positives = 61/106 (57%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
VED+G+GI + + +FT F Q SI+R +GGTG+GL+IS+ + LM GE G +S P
Sbjct: 503 VEDSGIGISPEKLAHLFTAFEQASASISRHYGGTGLGLAISRHIAMLMGGEAGASSTPGK 562
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
GS F TA L +AH S+E G ALV D + V +L
Sbjct: 563 GSIFWLTARLGKAHQEAIP-LSTELAGRRALVADDLQITQMVHCHL 607
>dbj|BAC60139.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
ref|NP_798255.1| hypothetical protein VP1876 [Vibrio parahaemolyticus RIMD 2210633]
Length = 566
Score = 73.2 bits (178), Expect = 6e-12
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
VEDTG+GIP AQS +F PF+QV S R G+G+GL+I K LV LM+GEI F S+ +
Sbjct: 356 VEDTGIGIPLAAQSSLFDPFVQVDRSAKRSFEGSGLGLAICKNLVDLMQGEISFESEERK 415
Query: 151 GSTFTFTAVLTRAHSSRNEN------KSSEFKGINALVVD 50
G+TF + L + + + S+ G + LVVD
Sbjct: 416 GTTFKVSIPLKEGQAQGAASGELAVVERSDLAGRSILVVD 455
>ref|ZP_00516150.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Crocosphaera watsonii WH 8501]
gb|EAM50747.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Crocosphaera watsonii WH 8501]
Length = 731
Score = 73.2 bits (178), Expect = 6e-12
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L +V+DTG+GIP + R+F PF QV S R +GGTG+GL ISK L LM G++ S
Sbjct: 237 LRFAVKDTGIGIPKERCHRLFQPFSQVDASTTRQYGGTGLGLVISKRLSELMGGKMWVHS 296
Query: 163 KPQVGSTFTFTAVLTRAHSS---RNENKSSEFKGINALVVDHRPVRAKV 26
+ GSTF FT A SS ++ SE G L++D K+
Sbjct: 297 EEGKGSTFNFTLRAKAATSSSPVTSQEGESELMGKRVLIIDDNLTSQKI 345
>emb|CAG76469.1| two-component sensor kinase and response regulator [Erwinia
carotovora subsp. atroseptica SCRI1043]
ref|YP_051659.1| two-component sensor kinase and response regulator [Erwinia
carotovora subsp. atroseptica SCRI1043]
Length = 933
Score = 73.2 bits (178), Expect = 6e-12
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L + + DTG+GI QS++F F Q SI+R HGGTG+GL I++ LV M G+I F
Sbjct: 443 VQLEVQIRDTGIGIAELQQSQLFQAFRQADTSISRRHGGTGLGLVITQRLVKEMGGDISF 502
Query: 169 ASKPQVGSTFTFTAVL-TRAHSSRNENKSSEFKGINALVVDHRPVRAKVT 23
S+ GSTF F L H+ E + +G + V++ P+ A+ T
Sbjct: 503 QSQLNKGSTFWFHITLPLNPHAMPTEPAYTMLQGKHLAYVEYHPIAAQAT 552
>ref|ZP_00627039.1| PAS [Nitrobacter hamburgensis X14]
gb|EAN59751.1| PAS [Nitrobacter hamburgensis X14]
Length = 752
Score = 73.2 bits (178), Expect = 6e-12
Identities = 43/81 (53%), Positives = 50/81 (61%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V+DTG+GI DAQ+RVF F Q IAR +GGTG+GLSIS +V M G I SKP
Sbjct: 386 VQDTGIGITPDAQARVFREFEQADEQIARNYGGTGLGLSISDRIVKRMGGRITLESKPGA 445
Query: 151 GSTFTFTAVLTRAHSSRNENK 89
GSTF + L AH S E K
Sbjct: 446 GSTFEVSIPLP-AHDSPPERK 465
>gb|EAN27741.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00607852.1| PAS [Magnetococcus sp. MC-1]
Length = 791
Score = 73.2 bits (178), Expect = 6e-12
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ + L SV D+G GIP +AQS++F PF Q + R HGGTG+GL+IS+ LV L G +
Sbjct: 528 EMVKLKFSVVDSGCGIPSEAQSQIFEPFTQADAYVTRHHGGTGLGLTISQRLVQLFGGTL 587
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSE 80
S P GS F+F +L R+ +++
Sbjct: 588 QVESTPNQGSRFSFILILQVTTEERSTQPNTQ 619
>gb|AAQ18202.1| hypothetical protein csv012 [uncultured bacterium]
Length = 1248
Score = 73.2 bits (178), Expect = 6e-12
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = -2
Query: 382 EMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKC 203
E+P P + +++ L V DTG+GIP + R+F+ F+Q +AR +GGTG+GL+ISK
Sbjct: 828 ELP-KPGSLETMELEFMVRDTGIGIPAEVVPRLFSAFVQANGGMARRYGGTGLGLAISKQ 886
Query: 202 LVGLMRGEIGFASKPQVGSTFTFTAVL----TRAHSSRNENKSSEFKGINALVVD 50
LV LM G+I S P VGS F F + T+A + E + N LVVD
Sbjct: 887 LVELMGGQIEVNSAPGVGSEFLFRVPVCIGTTQADMAMLE--EPDMPSFNVLVVD 939
>dbj|BAE51734.1| Sensor protein barA [Magnetospirillum magneticum AMB-1]
ref|YP_422293.1| Sensor protein barA [Magnetospirillum magneticum AMB-1]
Length = 1248
Score = 72.8 bits (177), Expect = 8e-12
Identities = 42/100 (42%), Positives = 55/100 (55%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L V DTG+G+ + ++R+F F Q S R GGTG+GL+ISK L LM G +G
Sbjct: 870 VMLRFEVRDTGIGLTDEQKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGV 929
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
S P GSTF FTA L + +E +G LVVD
Sbjct: 930 DSVPGQGSTFWFTARLGKGKPRAPLIPEAELQGRRMLVVD 969
>ref|NP_791516.1| sensor histidine kinase/response regulator GacS [Pseudomonas
syringae pv. tomato str. DC3000]
gb|AAO55211.1| sensor histidine kinase/response regulator GacS [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 917
Score = 72.8 bits (177), Expect = 8e-12
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q S++R GGTG+GL ISK L+ M GEIG S
Sbjct: 437 LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDS 496
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A + E+ + +G+ A V++H
Sbjct: 497 TPGEGSEFWISLKLPKAREDKEESLNLPLEGLRAAVLEH 535
>ref|ZP_00520847.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Two component regulator propeller
[Solibacter usitatus Ellin6076]
gb|EAM60259.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Two component regulator propeller
[Solibacter usitatus Ellin6076]
Length = 1349
Score = 72.8 bits (177), Expect = 8e-12
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+++ DTG GIP + +F F Q+ S R +GGTG+GL+ISK LV LM G + +S+
Sbjct: 938 VAIHDTGPGIPSEKIGSLFEKFSQLDGSTTRKYGGTGLGLAISKQLVSLMGGSMAVSSRL 997
Query: 157 QVGSTFTFTAVL-TRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
GSTF+FT L A+S ++ +G+ AL+VD + +V
Sbjct: 998 GEGSTFSFTLPLPLDANSPVEPLTAAGLRGLRALIVDDNEINRRV 1042
>ref|ZP_00596596.1| PAS [Ralstonia metallidurans CH34]
gb|EAN51428.1| PAS [Ralstonia metallidurans CH34]
Length = 1130
Score = 72.8 bits (177), Expect = 8e-12
Identities = 50/126 (39%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+ D SL SV DTG GIP D ++F PF Q+G + R GGTG+GLSI + LV M
Sbjct: 882 LTPDCQSLTFSVSDTGTGIPEDGLKKLFQPFTQIGDT-KRSAGGTGLGLSICQRLVTKMH 940
Query: 184 GEIGFASKPQVGSTFTFTAVLTRA--------HSSRNENKSSEFKGINALVV-DHRPVRA 32
G IG S+ G+T T T L A +N+ S K + L+V DH P R
Sbjct: 941 GTIGITSEVGKGTTVTATIELPIAAEIAPVLQSEQQNQPASKPGKALRVLIVDDHAPNRI 1000
Query: 31 KVTRYL 14
+ R L
Sbjct: 1001 LLQRQL 1006
>ref|ZP_00585950.1| PAS [Shewanella amazonensis SB2B]
gb|EAN39531.1| PAS [Shewanella amazonensis SB2B]
Length = 1236
Score = 72.8 bits (177), Expect = 8e-12
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I+L V DTG+GI + Q ++F F Q S R +GGTG+GLSISK LV +M G +
Sbjct: 872 ITLKFWVRDTGIGISREQQDKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGTMQV 931
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENK--SSEFKGINALVVDHRPVRAKV 26
S+P VGSTF+FT A ++ + LVVD P ++
Sbjct: 932 ESEPGVGSTFSFTVSFEIAEEAKVVPMVVPERLASLRTLVVDDNPTALQI 981
>dbj|BAC95587.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
ref|NP_935616.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
Length = 928
Score = 72.8 bits (177), Expect = 8e-12
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
+ DS+ L V+DTG+GI Q+++F F Q SI+R +GGTG+GL I++ LV M G
Sbjct: 437 SGDSLDLQFMVKDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSQMGG 496
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEF-KGINALVVDHRPVRAKVTR 20
EI S+ GSTF FT L +++ +E+ +G L+V+ A VT+
Sbjct: 497 EISLTSRLHQGSTFWFTLRLHSTQMPMSDSIEAEYLQGKELLLVEPNMQAAAVTQ 551
>ref|ZP_00504495.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Clostridium thermocellum ATCC
27405]
gb|EAM46451.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Clostridium thermocellum ATCC
27405]
Length = 932
Score = 72.8 bits (177), Expect = 8e-12
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Frame = -2
Query: 334 SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQ 155
SV DTG+GI + + +F F Q S +R +GGTG+GL+I K LV LM+GEI S+
Sbjct: 494 SVTDTGIGISDEQKKLLFQAFTQGDASTSRKYGGTGLGLAICKRLVELMKGEINVESEVG 553
Query: 154 VGSTFTFTAVLTRAHSSRNENKSS-------EFKGINALVVDHRPVRAKVTR 20
GSTF+F+ L A + N N S ++K + L+V+ V ++T+
Sbjct: 554 KGSTFSFSLRLKIASCNENRNGKSKSVDTEEQYKNVKILLVEDSSVNLQMTK 605
>emb|CAG21933.1| putative BaeS, Signal transduction histidine kinase [Photobacterium
profundum SS9]
ref|YP_131733.1| putative BaeS, Signal transduction histidine kinase [Photobacterium
profundum SS9]
Length = 971
Score = 72.8 bits (177), Expect = 8e-12
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
LII+ +DTG+GI D ++F PF Q S +R GGTG+GLSI + L LM G+I S
Sbjct: 559 LIITAQDTGIGIAEDRMQQIFDPFSQAEISTSRRFGGTGLGLSIVRQLANLMNGDIQLES 618
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEF 77
GSTFT T V+ + + + + + EF
Sbjct: 619 AYGKGSTFTITLVVEQGYYKQEKQQEVEF 647
>ref|YP_392735.1| multi-sensor hybrid histidine kinase [Thiomicrospira denitrificans
ATCC 33889]
gb|ABB43500.1| multi-sensor hybrid histidine kinase [Thiomicrospira denitrificans
ATCC 33889]
Length = 1452
Score = 72.8 bits (177), Expect = 8e-12
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
S +L+ SV D+G+GI + ++F PF Q SI R +GG+G+GLSIS LV M GEI
Sbjct: 1024 SATLLFSVIDSGIGISQNQIEKLFKPFSQADDSITRRYGGSGLGLSISSRLVSAMGGEID 1083
Query: 172 FASKPQVGSTFTFTAVLTRAHSSRN----EN-----------KSSEFKGINALVVDHRPV 38
SK VGSTF+F ++ S+N EN K +F + L+V+ +
Sbjct: 1084 VKSKEGVGSTFSFEIIVGVNSWSQNSLKLENMDISKDASKLLKYPDFSNVKLLLVEDNEI 1143
Query: 37 RAKVT 23
++T
Sbjct: 1144 NQEIT 1148
>gb|ABA88306.1| Hpt domain protein [Pelobacter carbinolicus DSM 2380]
ref|YP_356476.1| Hpt domain protein [Pelobacter carbinolicus DSM 2380]
Length = 1014
Score = 72.8 bits (177), Expect = 8e-12
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
I S ++++S+ D+G+GI ++F PF Q S R +GGTG+GLSI + L+G M
Sbjct: 504 ITEQSATIVVSIRDSGIGIEPQHIPQLFRPFSQADGSTTRKYGGTGLGLSICQDLIGHMG 563
Query: 184 GEIGFASKPQVGSTFTFTAVLTR--AHSSRNENKSSEFKGINALVVDHRPV 38
G+I S+P GS F F +T+ A + E K + AL+VD P+
Sbjct: 564 GQIHVFSQPGQGSNFWFEMTMTKDPACGMHHVACIPELKNMQALIVDPHPL 614
>ref|ZP_00586343.1| PAS [Shewanella amazonensis SB2B]
gb|EAN39325.1| PAS [Shewanella amazonensis SB2B]
Length = 1287
Score = 72.8 bits (177), Expect = 8e-12
Identities = 39/98 (39%), Positives = 59/98 (60%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L I ++D+G+G+ + Q+ +F F Q SI+R +GGTG+GL+I++ LV LM+GEI S
Sbjct: 689 LHIEIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQGEIRVTS 748
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
P VGSTFT L + + F G+ L+V+
Sbjct: 749 SPGVGSTFTIDVQL--GFDATKYRPGARFSGVRVLLVE 784
>gb|EAO24426.1| PAS [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00663086.1| PAS [Syntrophomonas wolfei str. Goettingen]
Length = 763
Score = 72.8 bits (177), Expect = 8e-12
Identities = 43/95 (45%), Positives = 58/95 (61%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
I D I L SV DTG GI Q ++F F Q SI+R +GGTG+GL+ISK +V +M+
Sbjct: 425 IFDDHIVLQASVADTGRGITAGQQEKMFESFYQGDSSISRTYGGTGLGLNISKKIVEMMQ 484
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE 80
G+I S + GSTF FT L SS+ E +S++
Sbjct: 485 GKIWLESDIESGSTFYFTVELGIPESSKLEAESNQ 519
>gb|EAN29681.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606024.1| PAS [Magnetococcus sp. MC-1]
Length = 1303
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/79 (48%), Positives = 48/79 (60%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D I L SV+DTG+G+ ++F F Q SI R +GG G+GL+I K LV LM GE+
Sbjct: 713 DQIVLRFSVQDTGIGMDESQIQQLFVAFEQADSSITRRYGGRGLGLAICKQLVNLMAGEL 772
Query: 175 GFASKPQVGSTFTFTAVLT 119
S P+VGS FTFT T
Sbjct: 773 SVQSTPEVGSCFTFTVPFT 791
>ref|YP_475076.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
gb|ABC99813.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
Length = 1459
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
V+DTG+GIP + Q R+F PF QV SI+R +GGTG+GL+IS+ L LM G I S+P
Sbjct: 982 VQDTGIGIPPEKQDRLFKPFSQVDSSISRQYGGTGLGLAISQRLCQLMGGTIWVQSQPGQ 1041
Query: 151 GSTFTF 134
GSTF F
Sbjct: 1042 GSTFGF 1047
>ref|ZP_00587277.1| PAS [Shewanella amazonensis SB2B]
gb|EAN38293.1| PAS [Shewanella amazonensis SB2B]
Length = 1021
Score = 72.4 bits (176), Expect = 1e-11
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
++ +SL++S+EDTG+GI D Q +F+PF Q + R GGTG+GLSI+K L LM G+
Sbjct: 544 ANGVSLMVSIEDTGIGISKDKQEVLFSPFTQADSTTTRHFGGTGLGLSIAKRLCELMDGD 603
Query: 178 IGFASKPQVGSTFTF 134
I S GSTF F
Sbjct: 604 IRVISAEDAGSTFKF 618
>ref|ZP_00679041.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO35390.1| PAS [Pelobacter propionicus DSM 2379]
Length = 859
Score = 72.4 bits (176), Expect = 1e-11
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
+ + SV D+G+GI + R+F PF QV ++R + GTG+GLSISK LV LM GEI
Sbjct: 780 AFLTSVRDSGIGIKDEELERLFKPFHQVDTGLSRKYEGTGLGLSISKKLVELMGGEIRVE 839
Query: 166 SKPQVGSTFTFTAVLTR 116
S P GSTF FT L R
Sbjct: 840 SSPGKGSTFAFTLPLER 856
>ref|YP_432128.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC27703.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 1263
Score = 72.4 bits (176), Expect = 1e-11
Identities = 43/110 (39%), Positives = 58/110 (52%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L +SV DTG+GIP D +F PF QV S R GGTG+GL+I K L LM G I
Sbjct: 727 DHLLLTVSVSDTGIGIPADKIGGLFDPFTQVDASTTRQFGGTGLGLAICKRLSELMEGGI 786
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
S+ GS F F L R+ ++ + + ++ LVVD +V
Sbjct: 787 TVHSEQGEGSCFEFCVRLQRSELTQPILPKVDMRALSLLVVDDNAANREV 836
>ref|ZP_01109020.1| putative sensor protein [Alteromonas macleodii 'Deep ecotype']
gb|EAR06736.1| putative sensor protein [Alteromonas macleodii 'Deep ecotype']
Length = 1257
Score = 72.4 bits (176), Expect = 1e-11
Identities = 39/75 (52%), Positives = 49/75 (65%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L SV DTGVGI ++Q ++FT F Q S+A +GGTG+GLSI K L L+ G+I F S
Sbjct: 686 LHFSVSDTGVGIAPESQPKLFTAFTQADASVATQYGGTGLGLSICKQLTQLLGGDITFKS 745
Query: 163 KPQVGSTFTFTAVLT 119
VGSTF+F LT
Sbjct: 746 VVDVGSTFSFYVTLT 760
>ref|ZP_00764596.1| COG0642: Signal transduction histidine kinase [Vibrio sp. Ex25]
Length = 542
Score = 72.4 bits (176), Expect = 1e-11
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
VEDTG+GIP +AQ +F PF+QV S R G+G+GL+I K LV LM+GEI F S+ +
Sbjct: 332 VEDTGIGIPIEAQPSLFDPFVQVDRSAKRSFEGSGLGLAICKNLVDLMQGEISFESEERK 391
Query: 151 GSTFTFTAVLTR------AHSSRNENKSSEFKGINALVVD 50
G+TF + L A + S+ G + LVVD
Sbjct: 392 GTTFKVSIPLKEGQAQGAAEGELATIERSDLAGRSILVVD 431
>ref|YP_444628.1| histidine kinase DhkJ [Salinibacter ruber DSM 13855]
gb|ABC46267.1| histidine kinase DhkJ [Salinibacter ruber DSM 13855]
Length = 1346
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L SV DTG+GIP + + R+F F QV S +R HGGTG+GLSIS+ L M GE+ S
Sbjct: 974 LHFSVRDTGIGIPKEKRDRLFESFSQVDASKSREHGGTGLGLSISQQLTEAMGGEMWVES 1033
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENK-------SSEFKGINALVV 53
GSTF FT A +K SS +G+ L+V
Sbjct: 1034 AVGEGSTFHFTIEAEEAEDGAQTDKNGVATGSSSAMQGVQVLIV 1077
>ref|ZP_00055969.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1666
Score = 72.4 bits (176), Expect = 1e-11
Identities = 42/100 (42%), Positives = 54/100 (54%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L V DTG+G+ + ++R+F F Q S R GGTG+GL+ISK L LM GE+G
Sbjct: 1104 VMLRFEVRDTGIGLTEEQKARLFQSFQQADTSTTRKFGGTGLGLAISKKLAELMGGEVGV 1163
Query: 169 ASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
S P GSTF FTA + + E G LVVD
Sbjct: 1164 DSVPGEGSTFWFTARMGKGKPRAPLLPEPELVGRRMLVVD 1203
>ref|ZP_00761865.1| COG0642: Signal transduction histidine kinase [Vibrio sp. Ex25]
Length = 806
Score = 72.4 bits (176), Expect = 1e-11
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
LI++V+DTG+GI +AQ R+F PF Q S R GGTG+GL+I K + M G + S
Sbjct: 504 LILAVKDTGIGISQEAQKRIFRPFEQAESSTTRRFGGTGLGLAIVKEIAEHMGGHVIVQS 563
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSS---EFKGINALVVDHRPVRA 32
+ VG+TFT LT + E ++ KG+ AL+V+ A
Sbjct: 564 QENVGTTFTVEIALTPCEPGKVEAVNAHKLNCKGLKALIVEDNRTNA 610
>ref|YP_435070.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC30645.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 659
Score = 72.4 bits (176), Expect = 1e-11
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 10/124 (8%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
I +D + VED+G+GI + Q R+F+ F Q S +R +GGTG+GL+I+K L+ LM
Sbjct: 414 IGADKVCFTCEVEDSGIGIAPEQQRRMFSSFQQADQSNSRRYGGTGLGLAIAKRLLELME 473
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENKSS----------EFKGINALVVDHRPVR 35
GEI S+ GS F F L H R+ N S+ +F+G L+V+ V
Sbjct: 474 GEIFVESESGKGSCFKFALTL---HYRRSPNGSTWNAAAAGPIPQFQG-RVLIVEDNQVN 529
Query: 34 AKVT 23
KVT
Sbjct: 530 QKVT 533
>gb|ABA55850.1| para-aminobenzoate synthase [Vibrio sp. DAT722]
Length = 567
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L VEDTG+GIP DAQ+ +F PF+QV S R G+G+GL+I+K LV LM GEI F S
Sbjct: 352 LCFDVEDTGIGIPLDAQATLFDPFVQVDRSSKRNFEGSGLGLAITKNLVELMDGEISFVS 411
Query: 163 KPQVGSTF 140
K + G+ F
Sbjct: 412 KEKQGTIF 419
>gb|AAZ45693.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
ref|YP_284163.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
Length = 852
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/113 (38%), Positives = 59/113 (52%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
S+ L S+ DTG+G+P D Q +F F Q S R GGTG+GL+IS LV LM G+I
Sbjct: 347 SVYLRFSIRDTGIGVPADKQQAIFEAFSQADVSTTRRFGGTGLGLAISARLVQLMDGKIW 406
Query: 172 FASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
S P GS F+FT ++ + F G LV++ A V +YL
Sbjct: 407 LESTPGQGSVFSFTGRFGVQEATSVRPFEARFGGRRVLVIED---NATVGQYL 456
>gb|AAY92257.1| sensory box sensor histidine kinase/response regulator [Pseudomonas
fluorescens Pf-5]
ref|YP_260091.1| sensory box sensor histidine kinase/response regulator [Pseudomonas
fluorescens Pf-5]
Length = 1059
Score = 72.4 bits (176), Expect = 1e-11
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L SV DTGVGI + Q+R+F F+Q SI+R +GG+G+GL+ISK +V LM+G+I S
Sbjct: 624 LCFSVTDTGVGISDEQQARLFNVFVQADRSISRRYGGSGLGLTISKKIVQLMQGDIRVKS 683
Query: 163 KPQVGSTFTFTAVLTRAHSSRNEN 92
+P G+TF F+ L+ EN
Sbjct: 684 QPGQGATFKFSVQLSLPPLPLEEN 707
>emb|CAI85820.1| sensor protein barA [Pseudoalteromonas haloplanktis TAC125]
ref|YP_339263.1| sensor protein barA [Pseudoalteromonas haloplanktis TAC125]
Length = 918
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = -2
Query: 346 SLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFA 167
S+++SV DTGVGIP D Q +FT F Q SI R GGTG+GL I+K +V M G+I
Sbjct: 441 SILVSVADTGVGIPVDKQDALFTAFGQADSSITRKFGGTGLGLIITKHIVEAMSGKITLN 500
Query: 166 SKPQVGSTFTFTAV 125
S P G+ FTF V
Sbjct: 501 SAPGNGTCFTFNGV 514
>gb|AAR29884.1| putative histidine kinase HHK5p [Cochliobolus heterostrophus]
Length = 1170
Score = 72.4 bits (176), Expect = 1e-11
Identities = 47/135 (34%), Positives = 65/135 (48%)
Frame = -2
Query: 487 ETGTQSANTLSGYPVANRKRSWENFRVFSRELNSSEMPFAPIASDSISLIISVEDTGVGI 308
E G+ S T + Y AN + +S + E P ++ VEDTG GI
Sbjct: 746 EIGSVSVATPNRYDTANTINVTDKGNAYSHYM-LQERAATPPPGRWLTFEFEVEDTGPGI 804
Query: 307 PFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTA 128
P S++F PF+Q +++ GGTG+GLSI L GLM+G IG S+ GS FT
Sbjct: 805 PDHLHSKIFEPFVQGDLGLSKKFGGTGLGLSICSQLAGLMKGTIGLKSEVGHGSVFTMVI 864
Query: 127 VLTRAHSSRNENKSS 83
L S + + SS
Sbjct: 865 PLKHVASRADSSASS 879
>gb|AAR29898.1| putative histidine kinase HHK19p [Cochliobolus heterostrophus]
Length = 1164
Score = 72.0 bits (175), Expect = 1e-11
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Frame = -2
Query: 409 VFSRELNSSEMPFAPIASDSISLII--SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHG 236
V S + E A I S+ L + SV+DTG G+ + R+F+ F+Q P +G
Sbjct: 886 VASPTSSQKEEAKAAIVSNGQELYLWCSVKDTGCGMDSASMKRIFSRFIQASPKTYSKYG 945
Query: 235 GTGIGLSISKCLVGLMRGEIGFASKPQVGSTFTFTAVLTRAHS 107
G+G+GL IS+ LV L GEIGFAS+ GSTF F A +RA S
Sbjct: 946 GSGLGLFISRKLVALQGGEIGFASQENAGSTFAFYAKASRAVS 988
>ref|YP_413373.1| multi-sensor hybrid histidine kinase [Nitrosospira multiformis ATCC
25196]
gb|ABB75981.1| multi-sensor hybrid histidine kinase [Nitrosospira multiformis ATCC
25196]
Length = 1118
Score = 72.0 bits (175), Expect = 1e-11
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
++ D +SL ISVED+G+GI D +F F Q S R +GGTG+GL+ISK LV LM
Sbjct: 568 LSEDEVSLRISVEDSGLGIAPDKLQSIFDKFTQADASTTRRYGGTGLGLAISKQLVQLMG 627
Query: 184 GEIGFASKPQVGSTFTFTAVL 122
G I S+ GSTF FT L
Sbjct: 628 GTIAAKSRVGAGSTFWFTLPL 648
>ref|ZP_00671136.1| PAS [Nitrosomonas eutropha C71]
gb|EAO16352.1| PAS [Nitrosomonas eutropha C71]
Length = 1221
Score = 72.0 bits (175), Expect = 1e-11
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = -2
Query: 376 PFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLV 197
P + D ++++ V D G+G+ A+ R+FTPF Q S R GGTG+GL I + LV
Sbjct: 711 PAEEVDGDVVTVMFQVIDNGIGMDDAARERLFTPFSQGDASTTRRFGGTGLGLIICRRLV 770
Query: 196 GLMRGEIGFASKPQVGSTFT 137
LM+GEI SKP VGS FT
Sbjct: 771 ELMKGEISVESKPDVGSVFT 790
>gb|AAM41638.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAY48819.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|YP_242839.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|NP_637714.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 1364
Score = 72.0 bits (175), Expect = 1e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ I L+ SV DTG+GI + QS +F+PF+Q S +R +GG+G+GL+IS+ L+ LM G +
Sbjct: 793 NKIKLLFSVRDTGIGISKEKQSLIFSPFLQADTSTSRRYGGSGLGLTISRRLIELMGGAL 852
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSS 83
S P GS F F L R + + +++
Sbjct: 853 EVESVPGRGSEFYFVITLERTDPPKAQQEAA 883
>ref|YP_412251.1| multi-sensor hybrid histidine kinase [Nitrosospira multiformis ATCC
25196]
gb|ABB74859.1| multi-sensor hybrid histidine kinase [Nitrosospira multiformis ATCC
25196]
Length = 1397
Score = 72.0 bits (175), Expect = 1e-11
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D++++ + D G+G+ + QSR+FT F Q S R +GGTG+GL+I+ LV LM G I
Sbjct: 864 DTVTVEFEITDNGIGMNEEVQSRLFTSFTQGDTSTTRRYGGTGLGLAITHHLVELMGGSI 923
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVV 53
S P GS FT SS E+K + GI+ LV+
Sbjct: 924 QVRSAPGEGSVFTVRLSFDLIPSSHMEDKVIDLTGISCLVI 964
>gb|AAB53936.1| sensor/regulator protein RpfA
Length = 929
Score = 72.0 bits (175), Expect = 1e-11
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L + + DTG+GI QS++F F Q SI+R HGGTG+GL I++ LV M G+I F
Sbjct: 442 VLLEVQIRDTGIGIAELQQSQLFQAFRQADTSISRRHGGTGLGLVITQRLVKEMGGDISF 501
Query: 169 ASKPQVGSTFTFTAVL-TRAHSSRNENKSSEFKGINALVVDHRPVRAKVT 23
S+ GSTF F L H+ E + +G + V++ P+ A+ T
Sbjct: 502 QSELSKGSTFWFHITLPLNPHAIPTEPAYTMLQGKHLAYVEYHPIAAQAT 551
>ref|ZP_00583064.1| PAS [Shewanella baltica OS155]
gb|EAN42495.1| PAS [Shewanella baltica OS155]
Length = 1784
Score = 72.0 bits (175), Expect = 1e-11
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D + L SV D+G+G+ Q+++F F Q S R +GGTG+GL+I K LV LM G+I
Sbjct: 1191 DDVVLRFSVRDSGIGLTEQQQAKLFKSFTQADTSTTRKYGGTGLGLAICKQLVELMGGKI 1250
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNEN--KSSEFKGINALVVDHRPVRAKVTR 20
G S+ GSTF FT L H S + E +G++ LVVD + R
Sbjct: 1251 GVESQFGHGSTFYFTVKL---HISDGQKLVLEQELEGMSVLVVDDNATARDIMR 1301
>gb|AAZ44999.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Dechloromonas aromatica RCB]
ref|YP_283469.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Dechloromonas aromatica RCB]
Length = 1005
Score = 72.0 bits (175), Expect = 1e-11
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
+ DTG+G+ + + R+F PF Q S R GGTG+GL+ISK L LM G IG S P
Sbjct: 425 ITDTGIGLAPEQRDRLFLPFEQADTSTTRKFGGTGLGLAISKRLTELMNGRIGVDSTPGQ 484
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEF-KGINALVVDHRP 41
GSTF L AHS + + + IN L++D P
Sbjct: 485 GSTFWCELPLQCAHSQHERPRRNRLPETINILLIDDDP 522
>ref|XP_964013.1| hypothetical protein [Neurospora crassa N150]
ref|XP_329247.1| hypothetical protein [Neurospora crassa]
gb|EAA34777.1| hypothetical protein [Neurospora crassa]
Length = 1319
Score = 72.0 bits (175), Expect = 1e-11
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D+I + ++DTG+GI + R+F PF Q PS AR GGTG+GL+ISK L+ LM+G +
Sbjct: 878 DTIEVKFVIQDTGIGIEEEVLKRLFQPFSQGDPSTARKFGGTGLGLTISKNLLELMKGRM 937
Query: 175 GFASKPQVGSTFTF 134
ASK G+T TF
Sbjct: 938 ALASKKDEGTTATF 951
>ref|ZP_00317496.1| COG0642: Signal transduction histidine kinase [Microbulbifer
degradans 2-40]
Length = 1109
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/95 (42%), Positives = 53/95 (55%)
Frame = -2
Query: 334 SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQ 155
SV DTG+GIP D S +F F QV S R +GGTG+GLSI K L +M G+I S+
Sbjct: 574 SVTDTGIGIPSDKISGLFDSFTQVDSSTTRRYGGTGLGLSICKMLTRIMGGDIFVVSEVG 633
Query: 154 VGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVD 50
G+ F F + +N S+ G+N L+VD
Sbjct: 634 KGTRFDFVVHVETGSCLPVDNAESDVTGLNVLLVD 668
>ref|YP_392932.1| histidine kinase [Thiomicrospira denitrificans ATCC 33889]
gb|ABB43697.1| histidine kinase [Thiomicrospira denitrificans ATCC 33889]
Length = 896
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/106 (35%), Positives = 62/106 (58%)
Frame = -2
Query: 331 VEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQV 152
++D+G+G+ + +S++F F Q SI R +GGTG+GL+IS V LM G++ SK
Sbjct: 540 IQDSGIGVTSEQKSKIFEAFSQADTSITRKYGGTGLGLTISSNFVELMGGKLDLESKLAE 599
Query: 151 GSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
G+TF FT +A + +K+S F ++AL++ K +YL
Sbjct: 600 GTTFFFTLDFEKAETLHETSKNS-FNALSALILSDSEKIKKQDKYL 644
>gb|AAZ48574.1| PAS [Dechloromonas aromatica RCB]
ref|YP_287044.1| PAS [Dechloromonas aromatica RCB]
Length = 860
Score = 71.6 bits (174), Expect = 2e-11
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Frame = -2
Query: 364 IASDSISLII--SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGL 191
+ D+ SL++ V+DTG+GI D SR+F PF Q S R +GGTG+GL+I+ L L
Sbjct: 626 LEEDAHSLLVRFEVQDTGIGIAGDVLSRLFRPFEQADNSTTRKYGGTGLGLAITLRLAEL 685
Query: 190 MRGEIGFASKPQVGSTFTFTAVLTRAHSS----------RNENKSSEFKGINALVVDHRP 41
M G+ G S+ VGSTF TA +A+S+ R S + + L+V+ P
Sbjct: 686 MGGQAGVDSEAGVGSTFWLTARFGKANSAEPGGLAGQSGRAPAAGSTLRRAHILLVEDDP 745
Query: 40 VRAKVTRYL 14
+ +V L
Sbjct: 746 LNREVAAIL 754
>ref|YP_236768.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Pseudomonas syringae pv.
syringae B728a]
gb|AAY38730.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Pseudomonas syringae pv.
syringae B728a]
Length = 917
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q S++R GGTG+GL ISK L+ M GEIG S
Sbjct: 437 LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDS 496
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A + E+ + G+ A V++H
Sbjct: 497 TPGEGSEFWISLKLPKAREDKEESLNIPLGGLRAAVLEH 535
>gb|AAZ34474.1| response regulator, sensor histidine kinase component GacS
[Pseudomonas syringae pv. phaseolicola 1448A]
ref|YP_275861.1| response regulator, sensor histidine kinase component GacS
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 917
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q S++R GGTG+GL ISK L+ M GEIG S
Sbjct: 437 LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDS 496
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A + E+ + G+ A V++H
Sbjct: 497 TPGEGSEFWISLKLPKAREDKEESLNIPLGGLRAAVLEH 535
>emb|CAD16788.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY (SENSOR HISTIDINE
KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION
REGULATOR PROTEIN [Ralstonia solanacearum]
ref|NP_521200.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY (SENSOR HISTIDINE
KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION
REGULATOR PROTEIN [Ralstonia solanacearum GMI1000]
Length = 994
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A+D++ LII V DTG+GI +AQ+ +FTPF+Q +I GTG+GL+IS+ L LM G
Sbjct: 522 AADTVHLIIRVTDTGIGIAPEAQATLFTPFVQADSTITHRQCGTGLGLAISRQLARLMGG 581
Query: 181 EIGFASKPQVGSTFT 137
+ S P VG+T T
Sbjct: 582 SLDMDSTPNVGTTLT 596
>ref|ZP_01133903.1| sensory box sensor histidine kinase/response regulator
[Pseudoalteromonas tunicata D2]
gb|EAR28095.1| sensory box sensor histidine kinase/response regulator
[Pseudoalteromonas tunicata D2]
Length = 884
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = -2
Query: 367 PIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLM 188
P I LI+SV DTGVG+ +F F+Q SI+R +GGTG+GLSI K LV LM
Sbjct: 527 PNNDKQIKLILSVSDTGVGLTEQQIDNIFNAFIQADGSISRKYGGTGLGLSIVKQLVKLM 586
Query: 187 RGEIGFASKPQVGSTFTFTAVL 122
GEI S P VGS+F +L
Sbjct: 587 GGEISVNSTPDVGSSFCVELML 608
>ref|ZP_00551653.1| IMP dehydrogenase/GMP reductase:Response regulator
receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal
[Desulfuromonas acetoxidans DSM 684]
gb|EAM70845.1| IMP dehydrogenase/GMP reductase:Response regulator
receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal
[Desulfuromonas acetoxidans DSM 684]
Length = 798
Score = 71.6 bits (174), Expect = 2e-11
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = -2
Query: 382 EMPFAPIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKC 203
+M + P + S +LI+SV+D+G+G+ A++ +FT F Q S +R +GGTG+GL+I K
Sbjct: 439 DMNWLPTNTTSGNLIVSVKDSGIGLDDAAKNNIFTAFTQADSSTSRKYGGTGLGLTIVKQ 498
Query: 202 LVGLMRGEIGFASKPQVGSTFTFT 131
LVGLM G+I GS FT T
Sbjct: 499 LVGLMDGDISVRDNEDHGSIFTVT 522
>gb|AAM37343.1| two-component system sensor protein [Xanthomonas axonopodis pv. citri
str. 306]
ref|NP_642807.1| two-component system sensor protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 1364
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ L+ SV DTG+GI + QS +F+PF+Q S +R +GG+G+GL+IS+ LV LM GE+
Sbjct: 793 NKFKLLFSVRDTGIGISKEKQSVIFSPFLQADTSTSRRYGGSGLGLTISRRLVELMGGEL 852
Query: 175 GFASKPQVGSTFTFTAVLTRA 113
S P GS F F L ++
Sbjct: 853 EVESVPGRGSEFYFVVTLEKS 873
>emb|CAJ24348.1| two-component system sensor histidine kinase-response regulator
hybridprotein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
ref|YP_364402.1| two-component system sensor histidine kinase-response regulator
hybridprotein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 1364
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ L+ SV DTG+GI + QS +F+PF+Q S +R +GG+G+GL+IS+ LV LM GE+
Sbjct: 793 NKFKLLFSVRDTGIGISKEKQSVIFSPFLQADTSTSRRYGGSGLGLTISRRLVELMGGEL 852
Query: 175 GFASKPQVGSTFTFTAVLTRA 113
S P GS F F L ++
Sbjct: 853 EVESVPGRGSEFYFVVTLEKS 873
>pir||B41863 two-component regulatory protein lemA - Pseudomonas syringae
Length = 929
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q S++R GGTG+GL ISK L+ M GEIG S
Sbjct: 449 LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDS 508
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A + E+ + G+ A V++H
Sbjct: 509 TPGEGSEFWISLKLPKAREDKEESLNIPLGGLRAAVLEH 547
>gb|AAS97529.1| sensory box histidine kinase/response regulator [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
ref|YP_012269.1| sensory box histidine kinase/response regulator [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
Length = 1223
Score = 71.6 bits (174), Expect = 2e-11
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = -2
Query: 364 IASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMR 185
+ D L+ ++EDTG GIP + + +F F Q S +R H G+G+GL+IS+ LV L
Sbjct: 994 VTHDRECLVFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLVELQG 1053
Query: 184 GEIGFASKPQVGSTFTFTAVLTRAHSSRNENK 89
G+IG S P GS F FT L H +R +
Sbjct: 1054 GDIGVQSTPGEGSVFWFTLPLGDIHPARRTQR 1085
>gb|AAK22014.1| sensory box histidine kinase/response regulator [Caulobacter
crescentus CB15]
ref|NP_418846.1| sensory box histidine kinase/response regulator [Caulobacter
crescentus CB15]
Length = 900
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L+ + DTGVG+P +AQ R+F F Q R GG+G+GL+I++ L ++ GE+ F S
Sbjct: 678 LVFDIIDTGVGVPLEAQKRLFERFQQADAGTTRRFGGSGLGLAITRKLARMLGGEVSFRS 737
Query: 163 KPQVGSTFTFT--AVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTR 20
P GSTF+ T A S++ S + LVV+ P V R
Sbjct: 738 VPGEGSTFSLTIAAPPVGPPSAQAGETSELLTSLKVLVVEDNPTNQLVAR 787
>sp|P48027|GACS_PSESY Sensor protein gacS
gb|AAA25877.1| regulatory protein
Length = 907
Score = 71.6 bits (174), Expect = 2e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
L ISV+DTG+G+ +F F Q S++R GGTG+GL ISK L+ M GEIG S
Sbjct: 427 LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDS 486
Query: 163 KPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDH 47
P GS F + L +A + E+ + G+ A V++H
Sbjct: 487 TPGEGSEFWISLKLPKAREDKEESLNIPLGGLRAAVLEH 525
>ref|ZP_00665369.1| PAS [Syntrophobacter fumaroxidans MPOB]
gb|EAO22048.1| PAS [Syntrophobacter fumaroxidans MPOB]
Length = 870
Score = 71.2 bits (173), Expect = 2e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = -2
Query: 352 SISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIG 173
S L++ VEDTG+GI +A +R+F F Q AR++GGTG+GL+ISK LV ++ G I
Sbjct: 538 SFCLVMVVEDTGMGIQPEAHNRIFESFRQQSGQRARVYGGTGLGLTISKSLVEMLGGTIS 597
Query: 172 FASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPV 38
S+P GS F + + + +E ++++++D V
Sbjct: 598 VQSRPGAGSVFEIRLPDVSEAAETDRAEQAETSDVDSILLDKAKV 642
>gb|AAZ27751.1| sensory box histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
ref|YP_270817.1| sensory box histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
Length = 1683
Score = 71.2 bits (173), Expect = 2e-11
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D I+L SV+D+G+G+ + Q ++F F Q S R +GGTG+GL+ISK LV LM G+I
Sbjct: 1097 DDINLEFSVKDSGIGMDDEQQKKLFQSFSQADSSTTRKYGGTGLGLTISKKLVELMNGQI 1156
Query: 175 GFASKPQVGSTFTFTAVL 122
SK GS F+FT L
Sbjct: 1157 WLESKAGEGSCFSFTTTL 1174
>emb|CAI85210.1| putative sensor protein; similar to LuxQ in Vibrio harveyi, similar
to ArcB sensor in E. coli [Pseudoalteromonas
haloplanktis TAC125]
ref|YP_338653.1| sensor protein [Pseudoalteromonas haloplanktis TAC125]
Length = 896
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = -2
Query: 337 ISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKP 158
+SV DTG+GI +AQ ++F PF Q S +R +GGTG+GLSI K LV LM G I S
Sbjct: 676 LSVSDTGIGISKEAQKKLFRPFAQADNSTSRQYGGTGLGLSICKKLVELMGGAIDLKSTA 735
Query: 157 QVGSTFTFTAVL 122
GSTFTF+ L
Sbjct: 736 GQGSTFTFSLPL 747
>ref|ZP_00674273.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
gb|EAO26881.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
Length = 1130
Score = 71.2 bits (173), Expect = 2e-11
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
+ I+V DTG+GIP D +F F Q S R +GGTG+GL I+K LV L G I S
Sbjct: 606 MAITVSDTGIGIPEDKHEAIFASFEQGDGSTERRYGGTGLGLPITKQLVELHGGTISVKS 665
Query: 163 KPQVGSTFTFTAVLTR--AHSSRNENKSSEFKGINALV 56
P VGS FTFT +++ HS +N ++ +G+ V
Sbjct: 666 NPGVGSEFTFTLNISKEPVHSFSLKNVNNLIEGVETSV 703
>gb|AAG08367.1| probable two-component sensor [Pseudomonas aeruginosa PAO1]
ref|NP_253669.1| probable two-component sensor [Pseudomonas aeruginosa PAO1]
Length = 998
Score = 71.2 bits (173), Expect = 2e-11
Identities = 42/116 (36%), Positives = 64/116 (55%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
++ S L +SV D G+GIP + + R+F F Q G ++ R +GGTG+GL+ISK LV + G
Sbjct: 653 SAGSERLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGG 712
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
IG S+ GSTF F L A S ++ + L+V+ + +V + L
Sbjct: 713 RIGVESRVGQGSTFWFEIELALASLSGATPPAASVSALEVLLVEDVALNREVAQGL 768
>ref|YP_201436.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gb|AAW76051.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 1402
Score = 71.2 bits (173), Expect = 2e-11
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ L+ SV DTG+GI + QS +F+PF+Q S +R +GG+G+GL+IS+ L+ LM GE+
Sbjct: 831 NKFKLLFSVRDTGIGISKEKQSLIFSPFLQADTSTSRRYGGSGLGLTISRRLIELMGGEL 890
Query: 175 GFASKPQVGSTFTFTAVLTRA 113
S P GS F F L ++
Sbjct: 891 EVESVPGRGSEFYFVITLEKS 911
>dbj|BAE69394.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
ref|YP_451668.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 1364
Score = 71.2 bits (173), Expect = 2e-11
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ L+ SV DTG+GI + QS +F+PF+Q S +R +GG+G+GL+IS+ L+ LM GE+
Sbjct: 793 NKFKLLFSVRDTGIGISKEKQSLIFSPFLQADTSTSRRYGGSGLGLTISRRLIELMGGEL 852
Query: 175 GFASKPQVGSTFTFTAVLTRA 113
S P GS F F L ++
Sbjct: 853 EVESVPGRGSEFYFVITLEKS 873
>emb|CAE09370.1| HYBRID SENSORY HISTIDINE KINASE [Wolinella succinogenes]
ref|NP_906470.1| HYBRID SENSORY HISTIDINE KINASE [Wolinella succinogenes DSM 1740]
Length = 538
Score = 71.2 bits (173), Expect = 2e-11
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
++I+L SV DTG+GI + ++F PF Q S AR +GGTG+GLSIS+ LV LM GE+
Sbjct: 422 EAIALDFSVSDTGIGIAPEYLEKIFRPFEQAESSTARNYGGTGLGLSISQELVRLMGGEM 481
Query: 175 GFASKPQVGSTFTFTAVLTRA 113
S+ GS F+FT L +A
Sbjct: 482 RCQSEEGKGSRFSFTLTLPKA 502
>ref|YP_484035.1| periplasmic sensor hybrid histidine kinase [Rhodopseudomonas
palustris HaA2]
gb|ABD05124.1| periplasmic sensor hybrid histidine kinase [Rhodopseudomonas
palustris HaA2]
Length = 649
Score = 71.2 bits (173), Expect = 2e-11
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = -2
Query: 334 SVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASKPQ 155
+V DTG+GI +AQ+R+F F Q IAR GGTG+GLSIS+ +V M G I S+P
Sbjct: 285 AVRDTGIGIAREAQTRIFGEFEQADDGIARSFGGTGLGLSISQRIVERMGGRIALDSQPG 344
Query: 154 VGSTFTFTAVLTRAHSS 104
GSTFT + LT A S
Sbjct: 345 RGSTFTASIPLTAADDS 361
>ref|ZP_00141454.2| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 750
Score = 71.2 bits (173), Expect = 2e-11
Identities = 42/116 (36%), Positives = 64/116 (55%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
++ S L +SV D G+GIP + + R+F F Q G ++ R +GGTG+GL+ISK LV + G
Sbjct: 405 SAGSERLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGG 464
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
IG S+ GSTF F L A S ++ + L+V+ + +V + L
Sbjct: 465 RIGVESRVGQGSTFWFEIELALASLSGATPPAASVSALEVLLVEDVALNREVAQGL 520
>ref|ZP_00971742.1| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa 2192]
Length = 750
Score = 71.2 bits (173), Expect = 2e-11
Identities = 42/116 (36%), Positives = 64/116 (55%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
++ S L +SV D G+GIP + + R+F F Q G ++ R +GGTG+GL+ISK LV + G
Sbjct: 405 SAGSERLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGG 464
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKVTRYL 14
IG S+ GSTF F L A S ++ + L+V+ + +V + L
Sbjct: 465 RIGVESRVGQGSTFWFEIELALASLSGATPPAASVSALEVLLVEDVALNREVAQGL 520
>gb|AAZ48079.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Dechloromonas aromatica RCB]
ref|YP_286549.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Dechloromonas aromatica RCB]
Length = 923
Score = 71.2 bits (173), Expect = 2e-11
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ + L + V DTG+GIP DAQ ++F F+Q S R +GGTG+GL+I + LV +M G I
Sbjct: 418 NGLKLALVVSDTGIGIPLDAQEKIFEHFLQADGSTTRKYGGTGLGLAICRHLVDMMGGRI 477
Query: 175 GFASKPQVGSTFT--FTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
S P G+ FT L + + E ++ G LVVD + +V
Sbjct: 478 HVESTPGKGAAFTVELDLPLGKLPVASPEKQALPATGARVLVVDDSSTQREV 529
>ref|ZP_00503636.1| Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Clostridium
thermocellum ATCC 27405]
gb|EAM47316.1| Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Clostridium
thermocellum ATCC 27405]
Length = 1160
Score = 71.2 bits (173), Expect = 2e-11
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -2
Query: 343 LIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFAS 164
LI SV DTG+GIP + S +F F QV +I+R +GGTG+GLSISK L LM+GEI S
Sbjct: 689 LIFSVTDTGIGIPEEHISDIFQEFRQVDGTISRKYGGTGLGLSISKKLADLMKGEIEVRS 748
Query: 163 KPQVGSTF 140
K GSTF
Sbjct: 749 KIGEGSTF 756
>ref|YP_431646.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC27221.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 893
Score = 71.2 bits (173), Expect = 2e-11
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Frame = -2
Query: 367 PIASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLM 188
P D I L I+VED+G+GI D Q+R+F F Q R +GGTG+GL+ISK LV +M
Sbjct: 541 PGDDDHIELEIAVEDSGIGIAQDQQARIFNAFEQHEGQSNRQYGGTGLGLAISKKLVEMM 600
Query: 187 RGEIGFASKPQVGSTFTFTAVLTRAHSSRNEN-------KSSEFKGINALVVDHRPVRAK 29
GEIG S+ GS F + EN K+ F+ L+VD K
Sbjct: 601 NGEIGLKSELGKGSRFEIRLHHVSVSQRKEENKYELRSAKAPRFRPARILLVDDVETNRK 660
Query: 28 VTR 20
+ +
Sbjct: 661 LIK 663
>ref|ZP_01166609.1| histidine kinase response regulator hybrid protein [Oceanospirillum
sp. MED92]
gb|EAR61283.1| histidine kinase response regulator hybrid protein [Oceanospirillum
sp. MED92]
Length = 670
Score = 70.9 bits (172), Expect = 3e-11
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D +L SV DTG+G+ QS++F F Q +I R GG+G+GLSI K L+ LM G+I
Sbjct: 321 DQATLKFSVSDTGLGLSEKQQSQLFKRFQQANETITREFGGSGLGLSICKQLLALMDGDI 380
Query: 175 GFASKPQVGSTFTFTAVL 122
G S+P GSTF FT L
Sbjct: 381 GVKSEPGKGSTFWFTLPL 398
>ref|ZP_00600877.1| PAS [Rubrobacter xylanophilus DSM 9941]
gb|EAN36092.1| PAS [Rubrobacter xylanophilus DSM 9941]
Length = 1063
Score = 70.9 bits (172), Expect = 3e-11
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I L V+D+G+GI + Q +F F Q S R +GGTG+GL+IS+ LV +M GEIG
Sbjct: 487 IELRFEVKDSGIGIQEEQQKHLFEAFSQADASTTRRYGGTGLGLAISRQLVEMMGGEIGL 546
Query: 169 ASKPQVGSTFTFTA 128
S P+ GSTF F+A
Sbjct: 547 KSSPKEGSTFHFSA 560
>ref|ZP_01135898.1| hypothetical protein PTD2_09494 [Pseudoalteromonas tunicata D2]
gb|EAR26570.1| hypothetical protein PTD2_09494 [Pseudoalteromonas tunicata D2]
Length = 896
Score = 70.9 bits (172), Expect = 3e-11
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D+ L SV+D G+GI AQ ++F F Q S +R +GGTG+GLSI K LV LM G+I
Sbjct: 677 DNKQLRFSVKDNGIGIADLAQKQLFDAFTQADNSTSRKYGGTGLGLSICKHLVELMGGKI 736
Query: 175 GFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFK-------GINALVVDHRPVRAKV 26
GF S+ VGS F FT + EF LV + P+ KV
Sbjct: 737 GFVSELNVGSEFYFTLPQGEFSTDEAPKTQHEFNIDEVSLGQFRILVAEDNPLNQKV 793
>gb|AAZ44767.1| PAS [Dechloromonas aromatica RCB]
ref|YP_283237.1| PAS [Dechloromonas aromatica RCB]
Length = 1439
Score = 70.9 bits (172), Expect = 3e-11
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
+ + L V DTG+G+ + QS++F+ F Q S R +GGTG+GLSI K +V L G I
Sbjct: 862 NEVDLGFEVIDTGIGMNVEQQSQLFSAFTQADTSTTRKYGGTGLGLSICKRIVELQGGSI 921
Query: 175 GFASKPQVGSTFTFTAVLTRA-HSSRNENKSSEFKGINALVVD 50
G +S+P +GS FTF RA + + + AL+VD
Sbjct: 922 GVSSQPGIGSRFTFQLQFGRATEQTGTPRRIGLPNNLRALIVD 964
>gb|AAM07719.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
ref|NP_619239.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
Length = 1028
Score = 70.9 bits (172), Expect = 3e-11
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = -2
Query: 340 IISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGFASK 161
+ SV DTG+GI + Q ++F PF Q+ S AR + GTG+GL++ K +V L +G+I S+
Sbjct: 639 LFSVTDTGIGISSEDQKKLFQPFTQIDSSSARQYCGTGLGLALVKKIVNLHKGDIWVESE 698
Query: 160 PQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRA 32
+ GSTF FT LT+ E+ ++ KGI ++++ +A
Sbjct: 699 LEKGSTFMFTIPLTKP----PESPKADTKGIEDVMLEFEMSKA 737
>ref|ZP_00849255.1| PAS [Shewanella sp. ANA-3]
gb|EAP21312.1| PAS [Shewanella sp. ANA-3]
Length = 1626
Score = 70.9 bits (172), Expect = 3e-11
Identities = 42/111 (37%), Positives = 62/111 (55%)
Frame = -2
Query: 358 SDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGE 179
++S+++ S+ D+G+GI + R+FT F Q S +R GGTG+GL+ISK LV LM G+
Sbjct: 1047 AESVTVQFSIVDSGIGISEEQIERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQ 1106
Query: 178 IGFASKPQVGSTFTFTAVLTRAHSSRNENKSSEFKGINALVVDHRPVRAKV 26
+ SK VGS F F LT N ++ G LVVD + ++
Sbjct: 1107 LQVTSKVGVGSRFWFD--LTFPVMEVEANPRADLSGYRILVVDDNQITTEI 1155
>gb|AAR34661.1| sensory box sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_952338.1| sensory box sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 772
Score = 70.9 bits (172), Expect = 3e-11
Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
I + SV DTG GI + +F PF+Q S RIHGGTG+GL+I + LV M G I
Sbjct: 443 IDVSCSVGDTGAGISPEKFDTIFDPFVQADGSTTRIHGGTGLGLAIVRRLVEAMDGVISV 502
Query: 169 ASKPQVGSTFTFTAVLTRAHSS----------RNENKSSEFKGINALVVDHRPVRAKVTR 20
AS+P +GSTF+F L A KS + ++ L+VD V KV
Sbjct: 503 ASEPGMGSTFSFRVRLRGAPDDIASPPPATGWAVAEKSVAVRPLSVLLVDDSAVSRKVVS 562
Query: 19 YL 14
L
Sbjct: 563 LL 564
>gb|AAZ47541.1| PAS [Dechloromonas aromatica RCB]
ref|YP_286011.1| PAS [Dechloromonas aromatica RCB]
Length = 1023
Score = 70.9 bits (172), Expect = 3e-11
Identities = 40/79 (50%), Positives = 49/79 (62%)
Frame = -2
Query: 349 ISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEIGF 170
+ L V DTG+GI Q R+FT F Q S R +GG+G+GL+IS+ L LM G IG
Sbjct: 794 VVLRFEVCDTGIGIAAVDQGRLFTAFEQADGSTTREYGGSGLGLAISRRLAKLMGGNIGV 853
Query: 169 ASKPQVGSTFTFTAVLTRA 113
S P VGSTF FTA L +A
Sbjct: 854 ESTPGVGSTFWFTARLDKA 872
>ref|ZP_00952408.1| sensor histidine kinase/response regulator [Oceanicaulis alexandrii
HTCC2633]
gb|EAP91561.1| sensor histidine kinase/response regulator [Oceanicaulis alexandrii
HTCC2633]
Length = 570
Score = 70.9 bits (172), Expect = 3e-11
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = -2
Query: 355 DSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRGEI 176
D+ LI+ V DTG G+ D RVF PF Q S +R +GGTG+GLSI K L+ +M+G I
Sbjct: 331 DTEELILRVRDTGCGMTVDQLERVFMPFTQADASTSREYGGTGLGLSIVKRLLEVMKGRI 390
Query: 175 GFASKPQVGSTFT 137
S+P VG+ FT
Sbjct: 391 DVESEPDVGTLFT 403
>dbj|BAC60830.1| sensor histidine kinase/response regulator [Vibrio parahaemolyticus
RIMD 2210633]
ref|NP_798946.1| sensor histidine kinase/response regulator [Vibrio parahaemolyticus
RIMD 2210633]
Length = 932
Score = 70.9 bits (172), Expect = 3e-11
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = -2
Query: 361 ASDSISLIISVEDTGVGIPFDAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMRG 182
A DS+ L V DTG+GI Q+++F F Q SI+R +GGTG+GL I++ LV M G
Sbjct: 437 AGDSVELQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSQMGG 496
Query: 181 EIGFASKPQVGSTFTFTAVLTRAHSSRNENKSSE-FKGINALVVDHRPVRAKVTRYL 14
EI S+ GSTF FT L ++ E G L+V+ A VT+ +
Sbjct: 497 EISLTSRLHQGSTFWFTLRLNSTEMPMSDLIEVELLTGKQLLLVEPNMQAASVTQQI 553
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,203,675,006
Number of Sequences: 3454138
Number of extensions: 25632020
Number of successful extensions: 90795
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 84702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87740
length of database: 1,185,965,366
effective HSP length: 124
effective length of database: 757,652,254
effective search space used: 59096875812
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)