BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN1e04.yg.2.1
(361 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA05219.1| TPA: TPA_exp: auxin efflux carrier protein ... 103 2e-21
gb|AAT48630.1| putative auxin efflux carrier protein 10 [Me... 100 1e-20
gb|AAQ14257.1| auxin efflux carrier [Momordica charantia] 100 1e-20
dbj|BAC41319.1| PIN1-like auxin transport protein [Cucumis ... 100 2e-20
gb|AAG17172.1| PIN1-like auxin transport protein [Populus t... 100 2e-20
gb|AAQ14256.1| AEC1 [Momordica charantia] 99 3e-20
gb|AAM54034.1| PIN1-like auxin transport protein [Populus t... 99 4e-20
ref|XP_507529.1| PREDICTED P0585G03.37 gene product [Oryza ... 97 1e-19
dbj|BAD68754.1| putative efflux carrier [Oryza sativa (japo... 97 1e-19
dbj|BAD38156.1| putative auxin transporter [Oryza sativa (j... 97 1e-19
dbj|BAD68753.1| putative efflux carrier [Oryza sativa (japo... 97 1e-19
ref|NP_917177.1| putative efflux carrier, pin3 [Oryza sativ... 97 1e-19
gb|ABA95736.1| auxin transport protein REH1, putative [Oryz... 96 2e-19
gb|ABA91350.1| auxin transport protein, putative [Oryza sat... 96 2e-19
gb|AAD04377.1| putative auxin efflux carrier protein; AtPIN... 96 4e-19
ref|NP_177500.1| PIN1 (PIN-FORMED 1); transporter [Arabidop... 96 4e-19
gb|AAD04376.1| putative auxin efflux carrier protein; AtPIN... 96 4e-19
gb|AAM54033.1| PIN1-like auxin transport protein [Populus t... 95 5e-19
emb|CAC24691.1| efflux carrier of polar auxin transport [Br... 94 9e-19
gb|AAM55301.1| auxin efflux carrier protein [Medicago trunc... 94 9e-19
emb|CAC67688.1| efflux carrier, pin3 [Brassica juncea] 94 9e-19
gb|AAS19858.1| auxin transporter PIN1 [Triticum aestivum] 94 9e-19
gb|AAP59843.1| PIN1-like protein [Populus tomentosa] 94 9e-19
emb|CAC67457.1| efflux carrier, pin2 [Brassica juncea] 94 9e-19
ref|NP_177250.1| PIN3 (PIN-FORMED 3); auxin:hydrogen sympor... 94 9e-19
ref|NP_849923.1| PIN4 (PIN-FORMED 4); auxin:hydrogen sympor... 94 1e-18
ref|NP_565261.1| PIN4 (PIN-FORMED 4); auxin:hydrogen sympor... 94 1e-18
gb|AAM55300.1| auxin efflux carrier protein [Medicago trunc... 94 2e-18
gb|AAM55297.1| auxin efflux carrier protein [Medicago trunc... 93 2e-18
gb|AAM55299.1| auxin efflux carrier protein [Medicago trunc... 93 2e-18
gb|AAO38045.1| auxin efflux carrier protein PIN1 [Pisum sat... 93 2e-18
gb|AAQ14258.1| auxin efflux carrier [Momordica charantia] 92 4e-18
gb|AAC00611.1| unknown protein [Arabidopsis thaliana] 92 6e-18
dbj|BAD46411.1| putative auxin efflux carrier protein [Oryz... 92 6e-18
ref|NP_564189.1| PIN7 (PIN-FORMED 7); auxin:hydrogen sympor... 92 6e-18
gb|AAT48628.1| putative auxin efflux carrier protein 7 [Med... 92 6e-18
ref|NP_849700.1| PIN7 (PIN-FORMED 7); auxin:hydrogen sympor... 92 6e-18
dbj|BAD05032.1| putative auxin transport protein [Pisum sat... 91 8e-18
ref|XP_475933.1| putative auxin efflux carrier [Oryza sativ... 91 1e-17
sp|Q6L5F6|PIN3B_ORYSA Putative auxin efflux carrier compone... 91 1e-17
gb|AAR90094.1| putative auxin efflux carrier protein [Popul... 91 1e-17
gb|AAM55298.2| auxin efflux carrier protein [Medicago trunc... 91 1e-17
ref|NP_197014.1| auxin:hydrogen symporter/ transporter [Ara... 89 3e-17
dbj|BAA97359.1| auxin transport protein EIR1 [Arabidopsis t... 88 6e-17
ref|NP_568848.1| EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin:... 88 6e-17
gb|AAD16060.1| root gravitropism control protein [Arabidops... 88 6e-17
ref|XP_467740.1| putative auxin transport protein [Oryza sa... 87 1e-16
emb|CAD56980.1| putative auxin transport protein [Physcomit... 87 1e-16
gb|AAN71616.1| PIN-like protein [Gossypium hirsutum] 86 2e-16
ref|NP_915836.1| auxin transport protein-like [Oryza sativa... 74 1e-12
dbj|BAD68142.1| putative auxin transporter PIN1 [Oryza sati... 74 1e-12
gb|AAT48627.1| putative auxin efflux carrier protein 6 [Med... 74 1e-12
ref|NP_177836.1| PIN6 (PIN-FORMED 6); auxin:hydrogen sympor... 73 2e-12
gb|AAD52696.1| auxin transport protein [Arabidopsis thaliana] 73 2e-12
gb|AAC00629.1| Hypothetical protein [Arabidopsis thaliana] 73 2e-12
gb|AAT48629.1| putative auxin efflux carrier protein 9 [Med... 67 1e-10
ref|NP_197157.1| auxin:hydrogen symporter/ transporter [Ara... 65 6e-10
sp|Q9FFD0|PIN8_ARATH Putative auxin efflux carrier componen... 65 6e-10
dbj|BAD87633.1| auxin efflux carrier-like [Oryza sativa (ja... 65 8e-10
ref|XP_463623.1| putative auxin transport protein-like [Ory... 65 8e-10
ref|XP_483458.1| PIN1-like auxin transport protein-like [Or... 63 3e-09
gb|ABA91234.1| hypothetical protein LOC_Os11g02950 [Oryza s... 41 0.009
ref|ZP_01011772.1| malonate transporter, putative [Rhodobac... 35 0.50
emb|CAE13777.1| adenosylmethionine--8-amino-7-oxononanoate ... 33 2.5
ref|ZP_00386306.1| COG0762: Predicted integral membrane pro... 33 2.5
ref|NP_916643.1| putative auxin transport protein [Oryza sa... 32 4.2
emb|CAE43782.1| putative membrane protein [Bordetella pertu... 32 7.2
emb|CAE37821.1| putative membrane protein [Bordetella parap... 32 7.2
emb|CAE32469.1| putative membrane protein [Bordetella bronc... 32 7.2
ref|ZP_01105225.1| hypothetical protein FB2170_03465 [Flavo... 32 7.2
gb|AAF82688.1| MTAP [Homo sapiens] 31 9.4
gb|AAL42127.1| GGDEF family protein [Agrobacterium tumefaci... 31 9.4
ref|ZP_00912690.1| malonate transporter, putative [Rhodobac... 31 9.4
gb|AAK86919.1| AGR_C_2062p [Agrobacterium tumefaciens str. ... 31 9.4
>tpg|DAA05219.1| TPA: TPA_exp: auxin efflux carrier protein [Medicago truncatula]
Length = 357
Score = 103 bits (256), Expect = 2e-21
Identities = 51/92 (55%), Positives = 65/92 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +YHV+ TVPLYV MI+AY+S++W+K+FT EQCSGINKFVAKFSIPLLSFQ++S
Sbjct: 1 MISLANVYHVITTTVPLYVTMILAYVSVKWFKIFTQEQCSGINKFVAKFSIPLLSFQVIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
+N +LK QK LL F + +
Sbjct: 61 SNNIYKMSLKLMFSDFIQK---LLAFVLLTAI 89
>gb|AAT48630.1| putative auxin efflux carrier protein 10 [Medicago truncatula]
Length = 591
Score = 100 bits (249), Expect = 1e-20
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +YHVL VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISALDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXL 321
TN N + QK+ L
Sbjct: 61 TNNPYTMNYRFIAADSLQKTIIL 83
>gb|AAQ14257.1| auxin efflux carrier [Momordica charantia]
Length = 607
Score = 100 bits (249), Expect = 1e-20
Identities = 48/92 (52%), Positives = 60/92 (65%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISLLDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L A S +
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLAVLAVWSNI 92
>dbj|BAC41319.1| PIN1-like auxin transport protein [Cucumis sativus]
Length = 617
Score = 99.8 bits (247), Expect = 2e-20
Identities = 47/92 (51%), Positives = 60/92 (65%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L A S +
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLAVLAVWSNI 92
>gb|AAG17172.1| PIN1-like auxin transport protein [Populus tremula x Populus
tremuloides]
Length = 614
Score = 99.8 bits (247), Expect = 2e-20
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFA 333
TN NL+ QK L+ A
Sbjct: 61 TNDPYNMNLRFITADSLQKVIVLVVLA 87
>gb|AAQ14256.1| AEC1 [Momordica charantia]
Length = 607
Score = 99.4 bits (246), Expect = 3e-20
Identities = 47/92 (51%), Positives = 60/92 (65%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA +++PLLSF +S
Sbjct: 1 MISLLDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALYAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L A S +
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIGLAVLAVWSNI 92
>gb|AAM54034.1| PIN1-like auxin transport protein [Populus tremula x Populus
tremuloides]
Length = 588
Score = 99.0 bits (245), Expect = 4e-20
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +YHVL VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISIVDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASR 345
+N NL QK L+ A SR
Sbjct: 61 SNNPYAMNLGFIAADTLQKIIVLVVLAIWSR 91
>ref|XP_507529.1| PREDICTED P0585G03.37 gene product [Oryza sativa (japonica
cultivar-group)]
ref|XP_506965.1| PREDICTED P0585G03.37 gene product [Oryza sativa (japonica
cultivar-group)]
dbj|BAD72501.1| putative auxin transport protein [Oryza sativa (japonica
cultivar-group)]
dbj|BAD72497.1| putative auxin transport protein [Oryza sativa (japonica
cultivar-group)]
gb|AAC39514.1| auxin transport protein REH1 [Oryza sativa]
sp|Q5SMQ9|PIN1_ORYSA Auxin efflux carrier component 1 (OsPIN1) (Ethylene insensitive
root 1 homolog)
Length = 595
Score = 97.4 bits (241), Expect = 1e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WW++FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYTMNLRFIAADTLQK 79
>dbj|BAD68754.1| putative efflux carrier [Oryza sativa (japonica cultivar-group)]
sp|Q5VP70|PIN3A_ORYSA Probable auxin efflux carrier component 3a (OsPIN3a)
Length = 618
Score = 97.1 bits (240), Expect = 1e-19
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS Y V+ VPLYVAM +AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L G A SR+
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRL 92
>dbj|BAD38156.1| putative auxin transporter [Oryza sativa (japonica cultivar-group)]
sp|Q67UL3|PIN1C_ORYSA Probable auxin efflux carrier component 1c (OsPIN1c)
Length = 592
Score = 97.1 bits (240), Expect = 1e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WW++FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYTMNLRFIAADTLQK 79
>dbj|BAD68753.1| putative efflux carrier [Oryza sativa (japonica cultivar-group)]
Length = 589
Score = 97.1 bits (240), Expect = 1e-19
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS Y V+ VPLYVAM +AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L G A SR+
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRL 92
>ref|NP_917177.1| putative efflux carrier, pin3 [Oryza sativa (japonica
cultivar-group)]
Length = 574
Score = 97.1 bits (240), Expect = 1e-19
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS Y V+ VPLYVAM +AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
TN NL+ QK L G A SR+
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRL 92
>gb|ABA95736.1| auxin transport protein REH1, putative [Oryza sativa (japonica
cultivar-group)]
Length = 584
Score = 96.3 bits (238), Expect = 2e-19
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +YHVL VPLYVAM +AY S++WW++F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPFAMNLRFLAADTLQK 79
>gb|ABA91350.1| auxin transport protein, putative [Oryza sativa (japonica
cultivar-group)]
sp|P0C0X5|PIN1B_ORYSA Probable auxin efflux carrier component 1b (OsPIN1b)
Length = 554
Score = 96.3 bits (238), Expect = 2e-19
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +YHVL VPLYVAM +AY S++WW++F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPFAMNLRFLAADTLQK 79
>gb|AAD04377.1| putative auxin efflux carrier protein; AtPIN1 [Arabidopsis
thaliana]
Length = 420
Score = 95.5 bits (236), Expect = 4e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
N NL+ QK
Sbjct: 61 ANNPYAMNLRFLAADSLQK 79
>ref|NP_177500.1| PIN1 (PIN-FORMED 1); transporter [Arabidopsis thaliana]
gb|AAM16221.1| At1g73590/F6D5_2 [Arabidopsis thaliana]
gb|AAK50090.1| At1g73590/F6D5_2 [Arabidopsis thaliana]
gb|AAG51807.1| auxin transporter splice variant b, putative; 17621-14517
[Arabidopsis thaliana]
sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1 (Protein PIN-FORMED) (AtPIN1)
Length = 622
Score = 95.5 bits (236), Expect = 4e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
N NL+ QK
Sbjct: 61 ANNPYAMNLRFLAADSLQK 79
>gb|AAD04376.1| putative auxin efflux carrier protein; AtPIN1 [Arabidopsis
thaliana]
Length = 622
Score = 95.5 bits (236), Expect = 4e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
N NL+ QK
Sbjct: 61 ANNPYAMNLRFLAADSLQK 79
>gb|AAM54033.1| PIN1-like auxin transport protein [Populus tremula x Populus
tremuloides]
Length = 640
Score = 95.1 bits (235), Expect = 5e-19
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y+VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISWNDLYNVLSAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
TN N + QK L+
Sbjct: 61 TNDPYAMNFRFIAADTLQKIIMLI 84
>emb|CAC24691.1| efflux carrier of polar auxin transport [Brassica juncea]
Length = 639
Score = 94.4 bits (233), Expect = 9e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYAMNLRFIAADTLQK 79
>gb|AAM55301.1| auxin efflux carrier protein [Medicago truncatula]
Length = 524
Score = 94.4 bits (233), Expect = 9e-19
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITLTDFYHVMTSMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLG---FAXASRVCCXE 360
+N N + QK LL +A S+ C E
Sbjct: 61 SNNPYKMNTRFLVADTLQKIIVLLALTIWANVSKRGCLE 99
>emb|CAC67688.1| efflux carrier, pin3 [Brassica juncea]
Length = 635
Score = 94.4 bits (233), Expect = 9e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYAMNLRFIAADTLQK 79
>gb|AAS19858.1| auxin transporter PIN1 [Triticum aestivum]
Length = 586
Score = 94.4 bits (233), Expect = 9e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAM++AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGTDFYHVMTAMVPLYVAMMLAYGSVKWWGIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYTMNLRFIAADTLQK 79
>gb|AAP59843.1| PIN1-like protein [Populus tomentosa]
Length = 619
Score = 94.4 bits (233), Expect = 9e-19
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI +Y+VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MICWNDLYNVLSAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
TN N K QK L+
Sbjct: 61 TNDPYAMNFKFIAADTLQKIIMLI 84
>emb|CAC67457.1| efflux carrier, pin2 [Brassica juncea]
Length = 640
Score = 94.4 bits (233), Expect = 9e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYAMNLRFIAADTLQK 79
>ref|NP_177250.1| PIN3 (PIN-FORMED 3); auxin:hydrogen symporter/ transporter
[Arabidopsis thaliana]
gb|AAM96993.1| putative auxin transport protein REH1 [Arabidopsis thaliana]
gb|AAN72096.1| putative auxin transport protein REH1 [Arabidopsis thaliana]
gb|AAD55507.1| auxin transport protein [Arabidopsis thaliana]
gb|AAD52695.1| auxin transport protein [Arabidopsis thaliana]
sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3 (AtPIN3)
Length = 640
Score = 94.4 bits (233), Expect = 9e-19
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN NL+ QK
Sbjct: 61 TNNPYAMNLRFIAADTLQK 79
>ref|NP_849923.1| PIN4 (PIN-FORMED 4); auxin:hydrogen symporter [Arabidopsis
thaliana]
gb|AAM14031.1| putative auxin transport protein [Arabidopsis thaliana]
gb|AAP40497.1| putative auxin transport protein [Arabidopsis thaliana]
sp|Q8RWZ6|PIN4_ARATH Auxin efflux carrier component 4 (AtPIN4)
Length = 616
Score = 94.0 bits (232), Expect = 1e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S+QWWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
TN N + QK L+
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLV 84
>ref|NP_565261.1| PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter
[Arabidopsis thaliana]
gb|AAM15143.1| putative auxin transport protein [Arabidopsis thaliana]
gb|AAC67319.2| putative auxin transport protein [Arabidopsis thaliana]
gb|AAF36769.1| auxin transporter splice variant b [Arabidopsis thaliana]
Length = 612
Score = 94.0 bits (232), Expect = 1e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S+QWWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
TN N + QK L+
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLV 84
>gb|AAM55300.1| auxin efflux carrier protein [Medicago truncatula]
Length = 604
Score = 93.6 bits (231), Expect = 2e-18
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N NL+ QK
Sbjct: 61 SNNPYKMNLRFLAADTLQK 79
>gb|AAM55297.1| auxin efflux carrier protein [Medicago truncatula]
Length = 659
Score = 93.2 bits (230), Expect = 2e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
TN N + QK LL
Sbjct: 61 TNNPYAMNYRFIAADTLQKIIMLL 84
>gb|AAM55299.1| auxin efflux carrier protein [Medicago truncatula]
Length = 621
Score = 93.2 bits (230), Expect = 2e-18
Identities = 43/87 (49%), Positives = 58/87 (66%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFA 333
TN N + QK L+ +
Sbjct: 61 TNNPYQMNFRFIAADTLQKIIMLVALS 87
>gb|AAO38045.1| auxin efflux carrier protein PIN1 [Pisum sativum]
Length = 599
Score = 93.2 bits (230), Expect = 2e-18
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N NL+ QK
Sbjct: 61 SNNPYKMNLRFLAADTLQK 79
>gb|AAQ14258.1| auxin efflux carrier [Momordica charantia]
Length = 634
Score = 92.0 bits (227), Expect = 4e-18
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGKDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
TN N + QK
Sbjct: 61 TNDPYAMNFRFVAADTLQK 79
>gb|AAC00611.1| unknown protein [Arabidopsis thaliana]
Length = 574
Score = 91.7 bits (226), Expect = 6e-18
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N NL+ QK
Sbjct: 61 SNNPYAMNLRFIAADTLQK 79
>dbj|BAD46411.1| putative auxin efflux carrier protein [Oryza sativa (japonica
cultivar-group)]
sp|Q651V6|PIN2_ORYSA Probable auxin efflux carrier component 2 (OsPIN2)
Length = 630
Score = 91.7 bits (226), Expect = 6e-18
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ IY VL VPLYVAM +AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFA 333
TN N + QK L A
Sbjct: 61 TNDPYSMNYRFLAADSLQKLVILAALA 87
>ref|NP_564189.1| PIN7 (PIN-FORMED 7); auxin:hydrogen symporter [Arabidopsis
thaliana]
gb|AAK96547.1| At1g23080/T26J12_14 [Arabidopsis thaliana]
Length = 527
Score = 91.7 bits (226), Expect = 6e-18
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N NL+ QK
Sbjct: 61 SNNPYAMNLRFIAADTLQK 79
>gb|AAT48628.1| putative auxin efflux carrier protein 7 [Medicago truncatula]
Length = 532
Score = 91.7 bits (226), Expect = 6e-18
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ IY+VL VPLYVAMI+AY S++WWK+FTP+QCSGIN+FV+ F++PLLSF +S
Sbjct: 1 MITGKDIYNVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVSVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N N QK
Sbjct: 61 SNDPYAMNYHFLAADSLQK 79
>ref|NP_849700.1| PIN7 (PIN-FORMED 7); auxin:hydrogen symporter/ transporter
[Arabidopsis thaliana]
gb|AAD52697.1| auxin transport protein [Arabidopsis thaliana]
sp|Q940Y5|PIN7_ARATH Auxin efflux carrier component 7 (AtPIN7)
Length = 619
Score = 91.7 bits (226), Expect = 6e-18
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL +PLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N NL+ QK
Sbjct: 61 SNNPYAMNLRFIAADTLQK 79
>dbj|BAD05032.1| putative auxin transport protein [Pisum sativum]
Length = 617
Score = 91.3 bits (225), Expect = 8e-18
Identities = 42/87 (48%), Positives = 57/87 (65%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WWK+F+P+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITFKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFA 333
+N N + QK L +
Sbjct: 61 SNNPYQMNFRFIAADTLQKIIMLFALS 87
>ref|XP_475933.1| putative auxin efflux carrier [Oryza sativa (japonica
cultivar-group)]
gb|AAT39149.1| putative auxin efflux carrier [Oryza sativa (japonica
cultivar-group)]
Length = 572
Score = 90.5 bits (223), Expect = 1e-17
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL VPLYVAM+VAY S++WW + TPEQCSGIN+FVA ++PLLSF +S
Sbjct: 1 MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASR 345
++ NL+ QK L A SR
Sbjct: 61 SSDPYAMNLRFVAADTLQKVLVLAALAAWSR 91
>sp|Q6L5F6|PIN3B_ORYSA Putative auxin efflux carrier component 3b (OsPIN3b)
Length = 590
Score = 90.5 bits (223), Expect = 1e-17
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS +Y VL VPLYVAM+VAY S++WW + TPEQCSGIN+FVA ++PLLSF +S
Sbjct: 1 MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASR 345
++ NL+ QK L A SR
Sbjct: 61 SSDPYAMNLRFVAADTLQKVLVLAALAAWSR 91
>gb|AAR90094.1| putative auxin efflux carrier protein [Populus tomentosa]
Length = 64
Score = 90.5 bits (223), Expect = 1e-17
Identities = 38/62 (61%), Positives = 50/62 (80%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TN 258
N
Sbjct: 61 AN 62
>gb|AAM55298.2| auxin efflux carrier protein [Medicago truncatula]
Length = 625
Score = 90.5 bits (223), Expect = 1e-17
Identities = 42/79 (53%), Positives = 53/79 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ IY V VPLYVAMI+AY S++WWK+FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N N QK
Sbjct: 61 SNDPYAMNYHFLAADSLQK 79
>ref|NP_197014.1| auxin:hydrogen symporter/ transporter [Arabidopsis thaliana]
emb|CAC01829.1| auxin transport protein-like [Arabidopsis thaliana]
sp|Q9LFP6|PIN5_ARATH Putative auxin efflux carrier component 5 (AtPIN5)
Length = 367
Score = 89.4 bits (220), Expect = 3e-17
Identities = 48/91 (52%), Positives = 59/91 (64%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MIS IYHV+ TVPLYV+M + +LS + KLF+PEQC+GINKFVAKFSIPLLSFQI+S
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASR 345
N + K QK ++ A R
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLR 91
>dbj|BAA97359.1| auxin transport protein EIR1 [Arabidopsis thaliana]
Length = 660
Score = 88.2 bits (217), Expect = 6e-17
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N N QK
Sbjct: 61 SNDPYAMNYHFLAADSLQK 79
>ref|NP_568848.1| EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin:hydrogen symporter/
transporter [Arabidopsis thaliana]
gb|AAL84962.1| AT5g57090/MUL3_3 [Arabidopsis thaliana]
gb|AAC61781.1| putative auxin efflux carrier AGR [Arabidopsis thaliana]
dbj|BAD44121.1| root gravitropism control protein (PIN2) [Arabidopsis thaliana]
gb|AAD11780.1| root gravitropism control protein [Arabidopsis thaliana]
gb|AAC84042.1| polar-auxin-transport efflux component AGRAVITROPIC 1 [Arabidopsis
thaliana]
gb|AAC39513.1| auxin transport protein EIR1 [Arabidopsis thaliana]
sp|Q9LU77|PIN2_ARATH Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux carrier
AGR) (Polar-auxin-transport efflux component
AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1)
(AtEIR1) (WAVY6)
gb|AAN64543.1| At5g57090/MUL3_3 [Arabidopsis thaliana]
Length = 647
Score = 88.2 bits (217), Expect = 6e-17
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N N QK
Sbjct: 61 SNDPYAMNYHFLAADSLQK 79
>gb|AAD16060.1| root gravitropism control protein [Arabidopsis thaliana]
Length = 647
Score = 88.2 bits (217), Expect = 6e-17
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y VL VPLYVAMI+AY S++WW +FTP+QCSGIN+FVA F++PLLSF +S
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQK 309
+N N QK
Sbjct: 61 SNDPYAMNYHFLAADSLQK 79
>ref|XP_467740.1| putative auxin transport protein [Oryza sativa (japonica
cultivar-group)]
Length = 614
Score = 87.0 bits (214), Expect = 1e-16
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +1
Query: 115 VPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILSTNXXXXXNLKXXXX 294
VPLYVAMI+AY S++WW++FTP+QCSGIN+FVA F++PLLSF +STN NL+
Sbjct: 2 VPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAA 61
Query: 295 XXXQK 309
QK
Sbjct: 62 DTLQK 66
>emb|CAD56980.1| putative auxin transport protein [Physcomitrella patens]
Length = 713
Score = 87.0 bits (214), Expect = 1e-16
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ IY+VL VPLYVAM++AY S++WW + TP+QC GIN+FV+ F++PLLSFQ +S
Sbjct: 1 MINGHDIYNVLSAMVPLYVAMMLAYGSVKWWGILTPQQCGGINRFVSIFAVPLLSFQFIS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLL 324
N N K K LL
Sbjct: 61 GNNPYAMNFKFIAADAVSKVLVLL 84
>gb|AAN71616.1| PIN-like protein [Gossypium hirsutum]
Length = 576
Score = 86.3 bits (212), Expect = 2e-16
Identities = 43/92 (46%), Positives = 58/92 (63%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ YHV+ VPLYVAMI+AY S++W K+F+P QCSGIN+FVA F++PLLSF ++
Sbjct: 1 MITLTDFYHVMTAMVPLYVAMILAYGSVKWRKIFSPGQCSGINRFVALFAVPLLSFHFIA 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRV 348
+N N + QK L A S+V
Sbjct: 61 SNDPYAMNFRFIAADTLQKVMVLGILAVWSKV 92
>ref|NP_915836.1| auxin transport protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 408
Score = 74.3 bits (181), Expect = 1e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y V+E PLY A + Y S++W K F+ EQC+GIN FVA +++P+L F ++S
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLG 327
TN N + QK+ LLG
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLG 85
>dbj|BAD68142.1| putative auxin transporter PIN1 [Oryza sativa (japonica
cultivar-group)]
sp|Q5VQY3|PIN5_ORYSA Probable auxin efflux carrier component 5 (OsPIN5)
Length = 426
Score = 74.3 bits (181), Expect = 1e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ +Y V+E PLY A + Y S++W K F+ EQC+GIN FVA +++P+L F ++S
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLG 327
TN N + QK+ LLG
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLG 85
>gb|AAT48627.1| putative auxin efflux carrier protein 6 [Medicago truncatula]
Length = 527
Score = 74.3 bits (181), Expect = 1e-12
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
M++ +Y+V+ VPLY AM+VAY S++ K+FTP+QCSGIN+FVA F++P+LSF +S
Sbjct: 1 MVTREDLYNVMCAMVPLYFAMLVAYGSVKCCKMFTPDQCSGINRFVAVFAVPVLSFHFIS 60
Query: 253 TN 258
N
Sbjct: 61 LN 62
>ref|NP_177836.1| PIN6 (PIN-FORMED 6); auxin:hydrogen symporter/ transporter
[Arabidopsis thaliana]
sp|Q9SQH6|PIN6_ARATH Probable auxin efflux carrier component 6 (AtPIN6)
Length = 570
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ Y V+ PLY AM VAY S++W K+FTP QCSGIN+FV+ F++P+LSF +S
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 253 TN 258
N
Sbjct: 61 QN 62
>gb|AAD52696.1| auxin transport protein [Arabidopsis thaliana]
Length = 570
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ Y V+ PLY AM VAY S++W K+FTP QCSGIN+FV+ F++P+LSF +S
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 253 TN 258
N
Sbjct: 61 QN 62
>gb|AAC00629.1| Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI+ Y V+ PLY AM VAY S++W K+FTP QCSGIN+FV+ F++P+LSF +S
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 253 TN 258
N
Sbjct: 61 QN 62
>gb|AAT48629.1| putative auxin efflux carrier protein 9 [Medicago truncatula]
gb|ABD28360.1| Auxin Efflux Carrier [Medicago truncatula]
Length = 363
Score = 67.4 bits (163), Expect = 1e-10
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI +Y V+ VPLY A+I+ Y S++WWK+FT EQC INK V F++PL +F+
Sbjct: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFE 57
>ref|NP_197157.1| auxin:hydrogen symporter/ transporter [Arabidopsis thaliana]
dbj|BAB09622.1| unnamed protein product [Arabidopsis thaliana]
Length = 351
Score = 65.1 bits (157), Expect = 6e-10
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI+ +Y V+E VPLYVA+I+ Y S++WW +FT +QC IN+ V F++PL + +
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIE 57
>sp|Q9FFD0|PIN8_ARATH Putative auxin efflux carrier component 8 (AtPIN8)
Length = 351
Score = 65.1 bits (157), Expect = 6e-10
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI+ +Y V+E VPLYVA+I+ Y S++WW +FT +QC IN+ V F++PL + +
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIE 57
>dbj|BAD87633.1| auxin efflux carrier-like [Oryza sativa (japonica cultivar-group)]
sp|Q5JLM1|PIN6_ORYSA Probable auxin efflux carrier component 6 (OsPIN6)
Length = 363
Score = 64.7 bits (156), Expect = 8e-10
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI +Y V+ TVPLY A+ + Y S++WW++FT EQC +N+ VA F++P +F+
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFE 57
>ref|XP_463623.1| putative auxin transport protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 393
Score = 64.7 bits (156), Expect = 8e-10
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI +Y V+ TVPLY A+ + Y S++WW++FT EQC +N+ VA F++P +F+
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFE 57
>ref|XP_483458.1| PIN1-like auxin transport protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD09105.1| PIN1-like auxin transport protein-like [Oryza sativa (japonica
cultivar-group)]
sp|Q6ZIB5|PIN4_ORYSA Probable auxin efflux carrier component 4 (OsPIN4)
Length = 370
Score = 62.8 bits (151), Expect = 3e-09
Identities = 29/94 (30%), Positives = 44/94 (46%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
MI +Y V+ PLY A+ + Y S++WW+ FT EQC+ IN V FS+P +F +
Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV 60
Query: 253 TNXXXXXNLKXXXXXXXQKSXXLLGFAXASRVCC 354
N + K+ + A +R C
Sbjct: 61 RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRC 94
>gb|ABA91234.1| hypothetical protein LOC_Os11g02950 [Oryza sativa (japonica
cultivar-group)]
Length = 603
Score = 41.2 bits (95), Expect = 0.009
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQ-WWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI I +L LY A+ + Y S + WW++FT E IN+ V F+ P +F+
Sbjct: 355 MIGWVDIGKILSAITLLYFALALGYCSSRRWWQIFTAEDSEAINRMVVWFAFPFFTFE 412
Score = 41.2 bits (95), Expect = 0.009
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 MISXXXIYHVLEETVPLYVAMIVAYLSIQ-WWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
MI I +L PLY A+++ Y S + WW++FT E I VA F++P +F+
Sbjct: 12 MIGWVDIGKILSAIAPLYFALVLGYCSSKRWWRIFTAEDSEAI--MVAWFALPFFTFE 67
>ref|ZP_01011772.1| malonate transporter, putative [Rhodobacterales bacterium HTCC2654]
gb|EAQ15079.1| malonate transporter, putative [Rhodobacterales bacterium HTCC2654]
Length = 309
Score = 35.4 bits (80), Expect = 0.50
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 VLEETVPLYVAMIVAYLSIQWWKL-FTPEQCSGINKFVAKFSIPLLSFQILST 255
++E +P+++ + YL+ WKL F+ + G+ KF F++P+L F+ LST
Sbjct: 4 LIEVILPVFLVLGFGYLAR--WKLGFSDDAVQGLMKFAQNFAVPVLLFRALST 54
>emb|CAE13777.1| adenosylmethionine--8-amino-7-oxononanoate transaminase (DAPA
aminotransferase) [Photorhabdus luminescens subsp.
laumondii TTO1]
ref|NP_928779.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 423
Score = 33.1 bits (74), Expect = 2.5
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +3
Query: 24 GRTFGVFFSSGPSNSHHDLXXXHLPCS*RNGSPVCSYDSG------LPIHTMVE 167
G TFG P NS H+L +LP SP C +DS +P T++E
Sbjct: 146 GDTFGAMSVCDPDNSMHNLYKGYLPTHLFAESPQCGFDSQWDPRDIMPFRTLLE 199
>ref|ZP_00386306.1| COG0762: Predicted integral membrane protein [Lactobacillus casei
ATCC 334]
Length = 97
Score = 33.1 bits (74), Expect = 2.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 91 IYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLS 237
IY V + LY+ M+ Y+ I W F Q S +++F+++F P LS
Sbjct: 8 IYQVGSWAIYLYIIMVFIYILISW---FPNAQGSALDRFLSRFVDPFLS 53
>ref|NP_916643.1| putative auxin transport protein [Oryza sativa (japonica
cultivar-group)]
Length = 250
Score = 32.3 bits (72), Expect = 4.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 274 NLKXXXXXXXQKSXXLLGFAXASRVCCXE 360
N+K QKS LLGFA S+ CC E
Sbjct: 2 NIKLIYSDILQKSLALLGFAAISKACCAE 30
>emb|CAE43782.1| putative membrane protein [Bordetella pertussis Tohama I]
ref|NP_882038.1| hypothetical protein BP3523 [Bordetella pertussis Tohama I]
Length = 315
Score = 31.6 bits (70), Expect = 7.2
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 100 VLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
VL +P++ ++ +L+ +W ++ P +N++V S+P L F+ ++
Sbjct: 4 VLTAALPVFALILTGWLAARW-RVLGPSATDALNRYVVYLSLPALLFRAMA 53
>emb|CAE37821.1| putative membrane protein [Bordetella parapertussis]
ref|NP_884756.1| hypothetical protein BPP2527 [Bordetella parapertussis 12822]
Length = 315
Score = 31.6 bits (70), Expect = 7.2
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 100 VLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
VL +P++ ++ +L+ +W ++ P +N++V S+P L F+ ++
Sbjct: 4 VLTAALPVFALILTGWLAARW-RVLGPSATDALNRYVVYLSLPALLFRAMA 53
>emb|CAE32469.1| putative membrane protein [Bordetella bronchiseptica RB50]
ref|NP_888517.1| hypothetical protein BB1972 [Bordetella bronchiseptica RB50]
Length = 315
Score = 31.6 bits (70), Expect = 7.2
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 100 VLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS 252
VL +P++ ++ +L+ +W ++ P +N++V S+P L F+ ++
Sbjct: 4 VLTAALPVFALILTGWLAARW-RVLGPSATDALNRYVVYLSLPALLFRAMA 53
>ref|ZP_01105225.1| hypothetical protein FB2170_03465 [Flavobacteriales bacterium
HTCC2170]
gb|EAR02310.1| hypothetical protein FB2170_03465 [Flavobacteriales bacterium
HTCC2170]
Length = 1052
Score = 31.6 bits (70), Expect = 7.2
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 28 GHLEYSSVQVPPIPTMISXXXI---YHVLEETVPLYVAMIVAYLSIQW 162
G + + + VPPIPT+IS + V+ +PL ++ ++IQW
Sbjct: 550 GIMVWEKLNVPPIPTIISKEDVATWLKVMWGIIPLLTVILALIINIQW 597
>gb|AAF82688.1| MTAP [Homo sapiens]
Length = 112
Score = 31.2 bits (69), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 174 HARAVLRYQQVRSEVFHPFALFPDPLYK 257
H A++++Q + SE +HPF + P Y+
Sbjct: 46 HEEAMIKFQMILSEGYHPFXIQESPFYR 73
>gb|AAL42127.1| GGDEF family protein [Agrobacterium tumefaciens str. C58]
ref|NP_531811.1| GGDEF family protein [Agrobacterium tumefaciens str. C58]
Length = 645
Score = 31.2 bits (69), Expect = 9.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +1
Query: 31 HLEYSSVQVPPIPTMISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTP----EQCSGI 198
H+E ++ Q P +P H L + +A + AY W LF P E C G
Sbjct: 237 HIEMTTRQAPAVP---------HALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGE 287
Query: 199 NKFVAKFSIP 228
N ++KF+ P
Sbjct: 288 NGLLSKFNDP 297
>ref|ZP_00912690.1| malonate transporter, putative [Rhodobacter sphaeroides ATCC 17025]
gb|EAP66048.1| malonate transporter, putative [Rhodobacter sphaeroides ATCC 17025]
Length = 309
Score = 31.2 bits (69), Expect = 9.4
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 100 VLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQ 243
VL ET+P + + + YL+ + + FTPE S + KFV F++ + F+
Sbjct: 4 VLLETLPFFALIGMGYLAGRA-RFFTPEATSWLTKFVFYFALSAMLFR 50
>gb|AAK86919.1| AGR_C_2062p [Agrobacterium tumefaciens str. C58]
ref|NP_354134.1| hypothetical protein AGR_C_2062 [Agrobacterium tumefaciens str.
C58]
Length = 663
Score = 31.2 bits (69), Expect = 9.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +1
Query: 31 HLEYSSVQVPPIPTMISXXXIYHVLEETVPLYVAMIVAYLSIQWWKLFTP----EQCSGI 198
H+E ++ Q P +P H L + +A + AY W LF P E C G
Sbjct: 255 HIEMTTRQAPAVP---------HALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGE 305
Query: 199 NKFVAKFSIP 228
N ++KF+ P
Sbjct: 306 NGLLSKFNDP 315
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 682,492,817
Number of Sequences: 3454138
Number of extensions: 11767141
Number of successful extensions: 26402
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 26126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26401
length of database: 1,185,965,366
effective HSP length: 95
effective length of database: 857,822,256
effective search space used: 20587734144
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)