BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS9h08.xg.2.1
(770 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_482629.1| putative chorimate mutase [Oryza sativa (j... 211 2e-53
ref|NP_196648.1| ATCM2; chorismate mutase [Arabidopsis thal... 136 1e-30
ref|XP_464326.1| putative chorismate mutase, cytosolic [Ory... 135 2e-30
ref|NP_916250.1| putative chorismate mutase precursor [Oryz... 123 6e-27
dbj|BAD87142.1| putative chorismate mutase precursor [Oryza... 123 6e-27
emb|CAA81286.1| chorismate mutase precursor [Arabidopsis th... 120 5e-26
dbj|BAB01816.1| chorismate mutase precursor [Arabidopsis th... 120 5e-26
emb|CAB54518.1| chorismate mutase [Arabidopsis thaliana] 120 5e-26
ref|NP_566846.1| CM1; chorismate mutase [Arabidopsis thalia... 120 5e-26
gb|ABA54871.1| putative chorismate mutase [Fagus sylvatica] 115 1e-24
ref|NP_177096.1| CM3 (CHORISMATE MUTASE 3); chorismate muta... 110 4e-23
gb|AAD21624.1| chorismate mutase 3 [Arabidopsis thaliana] 110 4e-23
gb|ABA99067.1| chorismate mutase, putative [Oryza sativa (j... 110 6e-23
gb|AAD48923.1| chorimate mutase [Lycopersicon esculentum] 98 3e-19
gb|AAS21013.1| chorismate mutase [Hyacinthus orientalis] 87 5e-16
dbj|BAD21145.1| chorismate mutase [Rosellinia sp. PF1022] 83 1e-14
gb|AAW46907.1| chorismate mutase, putative [Cryptococcus ne... 80 1e-13
ref|XP_504065.1| hypothetical protein [Yarrowia lipolytica]... 79 1e-13
gb|AAK83369.1| chorismate mutase [Filobasidiella neoformans] 79 1e-13
dbj|BAE63016.1| unnamed protein product [Aspergillus oryzae] 76 2e-12
ref|NP_594216.1| hypothetical protein SPAC16E8.04c [Schizos... 76 2e-12
emb|CAA06216.1| chorismate mutase precursor [Prunus avium] 75 3e-12
ref|XP_760367.1| hypothetical protein UM04220.1 [Ustilago m... 75 3e-12
gb|AAW33953.1| chorismate mutase [Pichia pastoris] 75 3e-12
gb|AAT93198.1| YPR060C [Saccharomyces cerevisiae] >gi|13141... 74 5e-12
pdb|5CSM|A Chain A, Yeast Chorismate Mutase, T226s Mutant, ... 74 5e-12
pdb|3CSM|B Chain B, Structure Of Yeast Chorismate Mutase Wi... 74 5e-12
pdb|1CSM|B Chain B, Mol_id: 1; Molecule: Chorismate Mutase;... 74 5e-12
ref|XP_664470.1| hypothetical protein AN6866.2 [Aspergillus... 74 5e-12
emb|CAG61710.1| unnamed protein product [Candida glabrata C... 74 8e-12
ref|XP_753341.1| chorismate mutase [Aspergillus fumigatus A... 71 4e-11
ref|XP_713068.1| chorismate mutase [Candida albicans SC5314... 70 9e-11
gb|AAF87954.1| chorismate mutase [Pichia angusta] 69 2e-10
ref|XP_389778.1| hypothetical protein FG09602.1 [Gibberella... 69 2e-10
gb|AAS51594.1| ADL326Wp [Ashbya gossypii ATCC 10895] >gi|45... 67 7e-10
ref|XP_961975.1| hypothetical protein [Neurospora crassa N1... 67 7e-10
ref|XP_451906.1| unnamed protein product [Kluyveromyces lac... 66 1e-09
dbj|BAD26595.1| chorismate mutase [Nicotiana tabacum] 63 1e-08
emb|CAG89818.1| unnamed protein product [Debaryomyces hanse... 62 2e-08
gb|AAB69323.1| cytosolic chorismate mutase 2 [Petroselinum ... 61 4e-08
gb|AAB69322.2| plastidic chorismate mutase 1 [Petroselinum ... 60 1e-07
gb|EAQ87889.1| hypothetical protein CHGG_04508 [Chaetomium ... 41 0.042
emb|CAF94983.1| unnamed protein product [Tetraodon nigrovir... 37 1.0
gb|EAM72608.1| hypothetical protein KradDRAFT_4367 [Kineoco... 37 1.0
emb|CAF90568.1| unnamed protein product [Tetraodon nigrovir... 36 1.8
ref|XP_780346.1| PREDICTED: similar to Headcase protein hom... 35 2.3
ref|XP_945507.1| PREDICTED: similar to Ig gamma-2B chain C ... 35 2.3
ref|YP_478766.1| hypothetical protein CYB_2571 [Cyanobacter... 35 4.0
dbj|BAA80061.1| 105aa long hypothetical protein [Aeropyrum ... 35 4.0
emb|CAC12075.1| aspartyl-tRNA synthetase related protein [T... 34 5.2
gb|AAA28266.1| putative 34 6.8
gb|AAQ09894.1| BcDNA:GH06048 [Drosophila yakuba] 33 8.8
ref|ZP_00677188.1| PAS:GGDEF [Pelobacter propionicus DSM 23... 33 8.8
ref|ZP_00471735.1| hypothetical protein CsalDRAFT_2700 [Chr... 33 8.8
ref|ZP_00657270.1| hypothetical protein NocaDRAFT_3404 [Noc... 33 8.8
ref|XP_901011.1| PREDICTED: hypothetical protein XP_895918 ... 33 8.8
ref|ZP_00985080.1| COG0749: DNA polymerase I - 3'-5' exonuc... 33 8.8
ref|XP_419109.1| PREDICTED: similar to rotatin [Gallus gallus] 33 8.8
dbj|BAA80133.1| 125aa long hypothetical protein [Aeropyrum ... 33 8.8
>ref|XP_482629.1| putative chorimate mutase [Oryza sativa (japonica cultivar-group)]
dbj|BAD09921.1| putative chorimate mutase [Oryza sativa (japonica cultivar-group)]
Length = 284
Score = 211 bits (537), Expect = 2e-53
Identities = 113/189 (59%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 LLLCTMVVVLTGLVSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSA 312
LL+C+ + L L+ +GLSLDTVR+FLTREEDT+VF LIERAK+P N PAYDP + A
Sbjct: 12 LLICSATLAL--LLLRLCSGLSLDTVREFLTREEDTVVFGLIERAKHPRNTPAYDPGYLA 69
Query: 313 AGRR-LNASFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAX 489
G +ASF E+F+RESEAVQ+KAGRYQSLQEIPFF +RVP LAPPYNFT++LY AA
Sbjct: 70 GGGHGHDASFAEMFVRESEAVQAKAGRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAA 129
Query: 490 SVNVNDAIWSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVAXXXXXX 669
VNVNDAIWSMYF+ELLP L K GDDGNYA S NY YVA
Sbjct: 130 LVNVNDAIWSMYFNELLPLLAKNGDDGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIG 189
Query: 670 XXXXXTSLI 696
T+LI
Sbjct: 190 DQQNYTTLI 198
>ref|NP_196648.1| ATCM2; chorismate mutase [Arabidopsis thaliana]
emb|CAB96842.1| chorismate mutase CM2 [Arabidopsis thaliana]
emb|CAB54519.1| chorismate mutase [Arabidopsis thaliana]
gb|AAM91774.1| putative chorismate mutase CM2 [Arabidopsis thaliana]
gb|AAL38714.1| putative chorismate mutase CM2 [Arabidopsis thaliana]
gb|AAD48922.1| chorimate mutase [Arabidopsis thaliana]
Length = 265
Score = 136 bits (342), Expect = 1e-30
Identities = 69/153 (45%), Positives = 92/153 (60%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
LSLD +R+ L R+EDTIVFSLIERAK+PLN PA++ + S E F+RE+E +
Sbjct: 17 LSLDLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSFS-SLTEFFVRETEII 75
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
Q+K GRY+ +E PFF +P ++ P + + S L+P A SVN+N IW +YF ELLP
Sbjct: 76 QAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKELLPLFV 135
Query: 553 KXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
K GDDGNY S +Y +VA
Sbjct: 136 KPGDDGNYPSTAASDLACLQALSRRIHYGKFVA 168
>ref|XP_464326.1| putative chorismate mutase, cytosolic [Oryza sativa (japonica
cultivar-group)]
dbj|BAD25130.1| putative chorismate mutase, cytosolic [Oryza sativa (japonica
cultivar-group)]
Length = 255
Score = 135 bits (340), Expect = 2e-30
Identities = 74/155 (47%), Positives = 93/155 (60%)
Frame = +1
Query: 187 AGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESE 366
A LSL VRD L REED+IVF+LIERA+ P N PAY +A GR S E F+RE+E
Sbjct: 4 AELSLAAVRDALVREEDSIVFALIERARRPRNAPAYAAAAAAGGR----SLAEFFVREAE 59
Query: 367 AVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPR 546
+ +KAG+YQ +++PFF +PS L P ++ L+ A SV+VNDAIW MYF+ELLP
Sbjct: 60 VLHAKAGQYQKPEDVPFFPQDLPSPLFPTKDYPKVLHSFASSVSVNDAIWKMYFNELLPL 119
Query: 547 LXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
GDDGNYA S + YVA
Sbjct: 120 FTVDGDDGNYAETVALDFACLKALSRRIHIGKYVA 154
>ref|NP_916250.1| putative chorismate mutase precursor [Oryza sativa (japonica
cultivar-group)]
Length = 294
Score = 123 bits (309), Expect = 6e-27
Identities = 64/153 (41%), Positives = 87/153 (56%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L+LD +R L R+ED+I+FSL+ERA++ N YD ++ + S VE +RE+E +
Sbjct: 47 LTLDNIRTSLVRQEDSIIFSLLERAQFCYNADIYDK-NAFHVDGFDGSLVEFMVRETEKL 105
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
+ GRY+S E PFF +P L PP + L+P A S+N+N IW MYFDELLPRL
Sbjct: 106 HQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHPIADSININKEIWKMYFDELLPRLV 165
Query: 553 KXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
K G DGNY S +Y +VA
Sbjct: 166 KEGSDGNYGSSALCDTICLQALSKRIHYGKFVA 198
>dbj|BAD87142.1| putative chorismate mutase precursor [Oryza sativa (japonica
cultivar-group)]
Length = 313
Score = 123 bits (309), Expect = 6e-27
Identities = 64/153 (41%), Positives = 87/153 (56%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L+LD +R L R+ED+I+FSL+ERA++ N YD ++ + S VE +RE+E +
Sbjct: 66 LTLDNIRTSLVRQEDSIIFSLLERAQFCYNADIYDK-NAFHVDGFDGSLVEFMVRETEKL 124
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
+ GRY+S E PFF +P L PP + L+P A S+N+N IW MYFDELLPRL
Sbjct: 125 HQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHPIADSININKEIWKMYFDELLPRLV 184
Query: 553 KXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
K G DGNY S +Y +VA
Sbjct: 185 KEGSDGNYGSSALCDTICLQALSKRIHYGKFVA 217
>emb|CAA81286.1| chorismate mutase precursor [Arabidopsis thaliana]
Length = 334
Score = 120 bits (301), Expect = 5e-26
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +1
Query: 7 LGKSSPHLPLLAPAKSPRFLSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVS-PS 183
L S+P LL + S R + + ++ ++H + T+ LTG
Sbjct: 20 LSTSTPISTLLPLPSTKSSFSVRCSLPQPSKPRSGTSSVHAVM---TLAGSLTGKKRVDE 76
Query: 184 TAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRES 363
+ L+L+ +R+ L R+ED+I+F L+ERAKY N YDP N S VE ++ +
Sbjct: 77 SESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDG-FNGSLVEYMVKGT 135
Query: 364 EAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
E + +K GR++S E PFF +P + PP + L+ AA S+N+N IW+MYF +L+P
Sbjct: 136 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 195
Query: 544 RLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
RL K GDDGNY S +Y +VA
Sbjct: 196 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVA 231
>dbj|BAB01816.1| chorismate mutase precursor [Arabidopsis thaliana]
sp|P42738|CHMU_ARATH Chorismate mutase, chloroplast precursor (CM-1)
Length = 334
Score = 120 bits (301), Expect = 5e-26
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +1
Query: 7 LGKSSPHLPLLAPAKSPRFLSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVS-PS 183
L S+P LL + S R + + ++ ++H + T+ LTG
Sbjct: 20 LSTSTPISTLLPLPSTKSSFSVRCSLPQPSKPRSGTSSVHAVM---TLAGSLTGKKRVDE 76
Query: 184 TAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRES 363
+ L+L+ +R+ L R+ED+I+F L+ERAKY N YDP N S VE ++ +
Sbjct: 77 SESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDG-FNGSLVEYMVKGT 135
Query: 364 EAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
E + +K GR++S E PFF +P + PP + L+ AA S+N+N IW+MYF +L+P
Sbjct: 136 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 195
Query: 544 RLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
RL K GDDGNY S +Y +VA
Sbjct: 196 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVA 231
>emb|CAB54518.1| chorismate mutase [Arabidopsis thaliana]
Length = 334
Score = 120 bits (301), Expect = 5e-26
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +1
Query: 7 LGKSSPHLPLLAPAKSPRFLSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVS-PS 183
L S+P LL + S R + + ++ ++H + T+ LTG
Sbjct: 20 LSTSTPISTLLPLPSTKSSFSVRCSLPQPSKPRSGTSSVHAVM---TLAGSLTGKKRVDE 76
Query: 184 TAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRES 363
+ L+L+ +R+ L R+ED+I+F L+ERAKY N YDP N S VE ++ +
Sbjct: 77 SESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDG-FNGSLVEYMVKGT 135
Query: 364 EAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
E + +K GR++S E PFF +P + PP + L+ AA S+N+N IW+MYF +L+P
Sbjct: 136 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 195
Query: 544 RLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
RL K GDDGNY S +Y +VA
Sbjct: 196 RLVKKGDDGNYXSTAVCDAICLQCLSKRIHYGKFVA 231
>ref|NP_566846.1| CM1; chorismate mutase [Arabidopsis thaliana]
gb|ABD59070.1| At3g29200 [Arabidopsis thaliana]
Length = 340
Score = 120 bits (301), Expect = 5e-26
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +1
Query: 7 LGKSSPHLPLLAPAKSPRFLSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVS-PS 183
L S+P LL + S R + + ++ ++H + T+ LTG
Sbjct: 26 LSTSTPISTLLPLPSTKSSFSVRCSLPQPSKPRSGTSSVHAVM---TLAGSLTGKKRVDE 82
Query: 184 TAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRES 363
+ L+L+ +R+ L R+ED+I+F L+ERAKY N YDP N S VE ++ +
Sbjct: 83 SESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDG-FNGSLVEYMVKGT 141
Query: 364 EAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
E + +K GR++S E PFF +P + PP + L+ AA S+N+N IW+MYF +L+P
Sbjct: 142 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 201
Query: 544 RLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
RL K GDDGNY S +Y +VA
Sbjct: 202 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVA 237
>gb|ABA54871.1| putative chorismate mutase [Fagus sylvatica]
Length = 323
Score = 115 bits (289), Expect = 1e-24
Identities = 59/153 (38%), Positives = 89/153 (58%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L+LD +R L R+ED+I+FSL+ERA+Y N Y+P ++ + + S VE ++E+E +
Sbjct: 76 LTLDGIRISLIRQEDSIIFSLLERAQYCYNADTYNP-NAFSMDGFHGSLVEYMVKETEKL 134
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
++ GRY+S E PFF +P L PP + L+P A S+N+N +W MYF +L+PRL
Sbjct: 135 HAQVGRYKSPDEHPFFPDDLPDPLLPPLQYPQVLHPFADSININKKVWDMYFRDLIPRLV 194
Query: 553 KXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
+ GDDGN S +Y +VA
Sbjct: 195 EEGDDGNCGSTAVCDTMCLQALSKRMHYGKFVA 227
>ref|NP_177096.1| CM3 (CHORISMATE MUTASE 3); chorismate mutase [Arabidopsis thaliana]
gb|AAG60103.1| chorismate mutase, putative [Arabidopsis thaliana]
gb|AAG52497.1| putative chorismate mutase; 16810-15349 [Arabidopsis thaliana]
gb|AAO63370.1| At1g69370 [Arabidopsis thaliana]
dbj|BAC42501.1| putative chorismate mutase [Arabidopsis thaliana]
Length = 316
Score = 110 bits (276), Expect = 4e-23
Identities = 54/127 (42%), Positives = 77/127 (60%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L L+++R L R+ED+I+F+L+ERA+Y N YD + S VE +RE+E +
Sbjct: 69 LKLESIRHSLIRQEDSIIFNLLERAQYRYNADTYDE-DAFTMEGFQGSLVEFMVRETEKL 127
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
+K RY+S E PFF +P + PP + L+ A S+N+N +W+MYF LLPRL
Sbjct: 128 HAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHLLPRLV 187
Query: 553 KXGDDGN 573
K GDDGN
Sbjct: 188 KPGDDGN 194
>gb|AAD21624.1| chorismate mutase 3 [Arabidopsis thaliana]
Length = 316
Score = 110 bits (276), Expect = 4e-23
Identities = 54/127 (42%), Positives = 77/127 (60%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L L+++R L R+ED+I+F+L+ERA+Y N YD + S VE +RE+E +
Sbjct: 69 LKLESIRHSLIRQEDSIIFNLLERAQYRYNADTYDE-DAFTMEGFQGSLVEFMVRETEKL 127
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
+K RY+S E PFF +P + PP + L+ A S+N+N +W+MYF LLPRL
Sbjct: 128 HAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHLLPRLV 187
Query: 553 KXGDDGN 573
K GDDGN
Sbjct: 188 KPGDDGN 194
>gb|ABA99067.1| chorismate mutase, putative [Oryza sativa (japonica
cultivar-group)]
Length = 332
Score = 110 bits (275), Expect = 6e-23
Identities = 55/153 (35%), Positives = 87/153 (56%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L++ ++R L + EDTI+F L+ER+++ N YDP +++ R N S VE ++++E +
Sbjct: 88 LTIGSIRSTLMKHEDTIIFGLLERSQFCYNPDTYDP-NASRIVRFNGSLVEFMVKKTEKM 146
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
++ GRY+S E PFF + + P + + L+PAA ++N+N IW +YF +LLPRL
Sbjct: 147 HARMGRYKSPDEHPFFPENLLEVVEPSVEYENVLHPAAANININKRIWDVYFGDLLPRLV 206
Query: 553 KXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
K G DGN S +Y YVA
Sbjct: 207 KEGSDGNCGSSACWDMLILQALSKRIHYGKYVA 239
>gb|AAD48923.1| chorimate mutase [Lycopersicon esculentum]
Length = 255
Score = 98.2 bits (243), Expect = 3e-19
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L LD++R L R+EDTI+F+LIER K+P+N Y + + F LF +E+E++
Sbjct: 9 LCLDSIRKSLIRQEDTIIFNLIERIKFPINPTLYKQQLPPSSNFSGSLFQYLF-QETESL 67
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL- 549
QSK GRY + +E PFF + ++ P T L+PAA SVNVN+ I +Y +++LP
Sbjct: 68 QSKVGRYLAPEENPFFPDNLSDSIIPLTKCTPVLHPAAESVNVNEKILDIYINQMLPLFC 127
Query: 550 XKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
+ DD N+A S +Y +VA
Sbjct: 128 TEVNDDANFATTAACDIQLLQALSRRIHYGKFVA 161
>gb|AAS21013.1| chorismate mutase [Hyacinthus orientalis]
Length = 289
Score = 87.4 bits (215), Expect = 5e-16
Identities = 42/108 (38%), Positives = 58/108 (53%)
Frame = +1
Query: 328 NASFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVND 507
+ S VE +RE+E + ++ GRY+S E PFF + + PP + L+P A S+N+N
Sbjct: 57 DGSLVEFMVRETEKLHAQVGRYKSPDEHPFFPEDLSEPMLPPIQYPKVLHPVADSININK 116
Query: 508 AIWSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
IW MYF +LLPRL K GDDGN S +Y +VA
Sbjct: 117 TIWEMYFSKLLPRLVKEGDDGNCGSSAVCDTICLQALSKRIHYGKFVA 164
>dbj|BAD21145.1| chorismate mutase [Rosellinia sp. PF1022]
Length = 263
Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Frame = +1
Query: 181 STAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRE 360
++ L L +R L R EDTI F LIER ++PLN+ Y P A G N SF++ +++E
Sbjct: 10 ASKALDLGNIRFQLIRLEDTITFHLIERVQFPLNKSIYQPGAIALGSDANLSFMDWYLQE 69
Query: 361 SEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELL 540
E +QS RY++ E PFF + + P ++ L+P VNVN+ I Y + L
Sbjct: 70 QEKLQSLIRRYEAPDEYPFFPDALQKPILKPLDYPKILHP--NDVNVNEKIKRFYIERFL 127
Query: 541 PRL---XKXGDDG----NYAVXXXXXXXXXXXXSXXXNYXXYVAXXXXXXXXXXXTSLI 696
P + GD G NY S ++ +VA T LI
Sbjct: 128 PAVCPDFGRGDGGELDENYGSSATCDIACLQALSRRIHFGKFVAESKFQSDPELYTRLI 186
>gb|AAW46907.1| chorismate mutase, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_568424.1| chorismate mutase [Cryptococcus neoformans var. neoformans JEC21]
gb|EAL17504.1| hypothetical protein CNBM0710 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 296
Score = 79.7 bits (195), Expect = 1e-13
Identities = 56/164 (34%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
LSLD +R L R EDTI+F LIERA++ N+ Y+ S++E F+ E+E
Sbjct: 14 LSLDRIRSQLIRLEDTIIFLLIERAQFAYNKKIYEAGAFKDEIDFEGSWLEWFLYETETF 73
Query: 373 QSKAGRYQSLQEIPFFAY-RVPSALAPPYNFTSDLY-PAAX--SVNVNDAIWSMYFDELL 540
+KA R+ S E PF R+P + P F + LY PAA SVNVN I Y + ++
Sbjct: 74 HAKARRFTSPDEHPFTPLDRLPQPILKPQKFPTLLYEPAATHPSVNVNSRILRFYVEHIV 133
Query: 541 PRLXKXG-------DDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
P + G DDGNY S ++ +V+
Sbjct: 134 PGITGAGKGKTESEDDGNYGSSATRDVEVLQALSRRIHFGMFVS 177
>ref|XP_504065.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79658.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 256
Score = 79.3 bits (194), Expect = 1e-13
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L L +RD L R EDTIVF+LIERA++ + Y +S S+++ F++ESE V
Sbjct: 10 LDLANIRDSLVRMEDTIVFNLIERAQFCRSEFVYKAGNSDIPG-FKGSYLDWFLQESEKV 68
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLX 552
+K RY + E FF +P A+ PP ++ L P + V+VND I +Y D+++P +
Sbjct: 69 HAKLRRYAAPDEQAFFPDDLPEAILPPIDYAPILAPYSKEVSVNDEIKKIYTDDIVPLVC 128
Query: 553 KXGDD--GNYAVXXXXXXXXXXXXSXXXNYXXYVAXXXXXXXXXXXTSLI 696
D NY S ++ +VA T LI
Sbjct: 129 AGTGDQPENYGSVMVCDIETLQALSRRIHFGKFVAESKFLSETERFTELI 178
>gb|AAK83369.1| chorismate mutase [Filobasidiella neoformans]
Length = 295
Score = 79.3 bits (194), Expect = 1e-13
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
LSLD +R L R EDTI+F LIERA++ N+ Y+ + S++E F+ E+E
Sbjct: 13 LSLDRIRSQLIRLEDTIIFLLIERAQFAYNKKIYEAGAFKDEIDFDGSWLEWFLYETETF 72
Query: 373 QSKAGRYQSLQEIPFFAY-RVPSALAPPYNFTSDLYPAAX---SVNVNDAIWSMYFDELL 540
+KA R+ S E PF R+P + P F + LY A SVNVN I Y + ++
Sbjct: 73 HAKARRFTSPDEHPFTPLDRLPQPILKPQKFPTLLYEPASTHPSVNVNSRILRFYVEHIV 132
Query: 541 PRLXKXG-------DDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
P + G DDGNY S ++ +V+
Sbjct: 133 PGITGAGKGKTESEDDGNYGSSATRDVEVLQALSRRIHFGMFVS 176
>dbj|BAE63016.1| unnamed protein product [Aspergillus oryzae]
Length = 266
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRL---NASFV 342
+S ++ L L +R L R EDTI F LIER ++PLN+P Y P G ++ + +
Sbjct: 7 LSDASKALDLANIRFQLIRLEDTITFHLIERVQFPLNKPIYVP----GGVKIPGDDIPLM 62
Query: 343 ELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSM 522
+ +RE E +QS+ RYQS E PFF + + P + L+ VNVND I
Sbjct: 63 DYLLREQERIQSRVRRYQSPDEYPFFPDVLEEPILAPLEYPKILHD--NDVNVNDTIKRR 120
Query: 523 YFDELLP 543
Y +++LP
Sbjct: 121 YVEDILP 127
>ref|NP_594216.1| hypothetical protein SPAC16E8.04c [Schizosaccharomyces pombe 972h-]
emb|CAB11033.1| SPAC16E8.04c [Schizosaccharomyces pombe]
sp|O13739|CHMU_SCHPO Probable chorismate mutase (CM)
Length = 251
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLN--ASFVELFIRESE 366
L L+ +R L R+EDTI+F+ +ERA++P N Y N SF+ + E E
Sbjct: 8 LKLENIRSALIRQEDTIIFNFLERAQFPRNEKVYKSGKEGCLNLENYDGSFLNYLLHEEE 67
Query: 367 AVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPR 546
V + RY S +E P F +P + P ++ L+P +VNVN I Y +E++P+
Sbjct: 68 KVYALVRRYASPEEYP-FTDNLPEPILPKFSGKFPLHP--NNVNVNSEILEYYINEIVPK 124
Query: 547 LXKXGDD-GNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
+ GDD NY S +Y +VA
Sbjct: 125 ISSPGDDFDNYGSTVVCDIRCLQSLSRRIHYGKFVA 160
>emb|CAA06216.1| chorismate mutase precursor [Prunus avium]
Length = 131
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/90 (37%), Positives = 48/90 (53%)
Frame = +1
Query: 379 KAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLXKX 558
+ GRY S E PFF + P + PP ++ L+P A S+N+N +W MYF ++LPRL K
Sbjct: 4 QVGRYSSPDEHPFFPHVPPEPVLPPLHYPQVLHPIANSININHKVWEMYFRDILPRLVKE 63
Query: 559 GDDGNYAVXXXXXXXXXXXXSXXXNYXXYV 648
GDDGN+ S +Y +V
Sbjct: 64 GDDGNFGSTAVCDTMCLQALSKRIHYGKFV 93
>ref|XP_760367.1| hypothetical protein UM04220.1 [Ustilago maydis 521]
gb|EAK85224.1| hypothetical protein UM04220.1 [Ustilago maydis 521]
Length = 288
Score = 74.7 bits (182), Expect = 3e-12
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDP-----LHSAAGRRLNASFVELFIR 357
LSL+ +R L R E+TI F LIERA++ N Y P L G N+S++ F++
Sbjct: 15 LSLENIRSVLIRLEETICFQLIERAQFARNAKCYLPGGFPQLKEREG--WNSSWLAWFLK 72
Query: 358 ESEAVQSKAGRYQSLQEIPFFAYR-VPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDE 534
E+E+V +K R+++ E PF + +P + P + L+ SVNVND I Y D
Sbjct: 73 ETESVHAKVRRFEAPDEYPFTDPKLLPKPILEPVTYPELLW--KHSVNVNDQILKFYVDS 130
Query: 535 LLPRLXKX----GDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
++P + K DDG+Y S ++ +V+
Sbjct: 131 IVPEITKTLGENADDGHYGSSAIRDIEVLSALSRRIHFGMFVS 173
>gb|AAW33953.1| chorismate mutase [Pichia pastoris]
Length = 273
Score = 74.7 bits (182), Expect = 3e-12
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +1
Query: 178 PSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIR 357
P+T L+L +R L R EDT+VFS IER+++ + Y P + + SF++ +
Sbjct: 6 PATV-LNLANIRQALVRMEDTVVFSFIERSQFYESPSVYAP-NKYKIPNFSGSFLDWLLL 63
Query: 358 ESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDEL 537
++E S RY+S E PFF ++ + P N+ L A VNVND I ++Y +++
Sbjct: 64 QNEKTHSLVRRYESPDETPFFPDQLEESFLPSLNYPPILADYADEVNVNDEIRTVYIEKI 123
Query: 538 LPRL-XKXGD-DGNYAVXXXXXXXXXXXXSXXXNYXXYVAXXXXXXXXXXXTSLI 696
+P++ K GD D N S ++ +VA T+LI
Sbjct: 124 VPQIAAKKGDQDENIGSTACADVDGLQALSRRVHFGKFVAEAKFQNEMARYTNLI 178
>gb|AAT93198.1| YPR060C [Saccharomyces cerevisiae]
emb|CAA95004.1| Aro7p [Saccharomyces cerevisiae]
emb|CAA89177.1| Aro7p [Saccharomyces cerevisiae]
ref|NP_015385.1| Chorismate mutase, catalyzes the conversion of chorismate to
prephenate to initiate the
tyrosine/phenylalanine-specific branch of aromatic amino
acid biosynthesis; Aro7p [Saccharomyces cerevisiae]
sp|P32178|CHMU_YEAST Chorismate mutase (CM)
gb|AAB59309.1| chorismate mutase
pdb|4CSM|B Chain B, Yeast Chorismate Mutase + Tyr + Endooxabicyclic Inhibitor
pdb|4CSM|A Chain A, Yeast Chorismate Mutase + Tyr + Endooxabicyclic Inhibitor
pdb|2CSM|A Chain A, Tyr-Bound T-State Of Yeast Chorismate Mutase
Length = 256
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG-RRLNASFVELFIRESEA 369
L+L +RD L R ED+I+F IER+ + Y+ H SF++ + E
Sbjct: 10 LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
S+ R++S E PFF ++ + P N+ L P A VN ND I +Y ++++P +
Sbjct: 70 AHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLI 129
Query: 550 XK-XGDDGN 573
K GDD N
Sbjct: 130 SKRDGDDKN 138
>pdb|5CSM|A Chain A, Yeast Chorismate Mutase, T226s Mutant, Complex With Trp
Length = 256
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG-RRLNASFVELFIRESEA 369
L+L +RD L R ED+I+F IER+ + Y+ H SF++ + E
Sbjct: 10 LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
S+ R++S E PFF ++ + P N+ L P A VN ND I +Y ++++P +
Sbjct: 70 AHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLI 129
Query: 550 XK-XGDDGN 573
K GDD N
Sbjct: 130 SKRDGDDKN 138
>pdb|3CSM|B Chain B, Structure Of Yeast Chorismate Mutase With Bound Trp And An
Endooxabicyclic Inhibitor
pdb|3CSM|A Chain A, Structure Of Yeast Chorismate Mutase With Bound Trp And An
Endooxabicyclic Inhibitor
Length = 256
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG-RRLNASFVELFIRESEA 369
L+L +RD L R ED+I+F IER+ + Y+ H SF++ + E
Sbjct: 10 LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
S+ R++S E PFF ++ + P N+ L P A VN ND I +Y ++++P +
Sbjct: 70 AHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLI 129
Query: 550 XK-XGDDGN 573
K GDD N
Sbjct: 130 SKRDGDDKN 138
>pdb|1CSM|B Chain B, Mol_id: 1; Molecule: Chorismate Mutase; Chain: A, B; Ec:
4.1.3.27; Mutation: Allele Mutant, Thr 226 Ile;
Heterogen: Tryptophan; Chain: L, M
pdb|1CSM|A Chain A, Mol_id: 1; Molecule: Chorismate Mutase; Chain: A, B; Ec:
4.1.3.27; Mutation: Allele Mutant, Thr 226 Ile;
Heterogen: Tryptophan; Chain: L, M
Length = 256
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG-RRLNASFVELFIRESEA 369
L+L +RD L R ED+I+F IER+ + Y+ H SF++ + E
Sbjct: 10 LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
S+ R++S E PFF ++ + P N+ L P A VN ND I +Y ++++P +
Sbjct: 70 AHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLI 129
Query: 550 XK-XGDDGN 573
K GDD N
Sbjct: 130 SKRDGDDKN 138
>ref|XP_664470.1| hypothetical protein AN6866.2 [Aspergillus nidulans FGSC A4]
gb|AAD30065.1| chorismate mutase [Emericella nidulans]
gb|EAA58265.1| hypothetical protein AN6866.2 [Aspergillus nidulans FGSC A4]
Length = 267
Score = 74.3 bits (181), Expect = 5e-12
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRL---NASFV 342
+S ++ L L +R L R EDTI F LIER ++PLN+ Y P G ++ S +
Sbjct: 7 LSDASKALDLANIRFQLIRLEDTITFHLIERVQFPLNKTIYIP----GGVKIPNEQISLM 62
Query: 343 ELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSM 522
+ +RE+E +QS+ RYQS E PFF + + P ++ L+ VNVN+ I +
Sbjct: 63 DYLLRETERLQSRVRRYQSPDEYPFFPSALEKPILQPLDYPKILHD--NDVNVNETIKTR 120
Query: 523 YFDELLPRL 549
Y ++LP +
Sbjct: 121 YVQDILPAI 129
>emb|CAG61710.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_448747.1| unnamed protein product [Candida glabrata]
Length = 260
Score = 73.6 bits (179), Expect = 8e-12
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG-RRLNASFVELFIRESEA 369
L+L +RD L + ED+I+F IER+ +P+ P Y P H SF++ + + E
Sbjct: 10 LNLQNIRDELVKMEDSIIFKFIERSHFPVCAPVYAPNHPDLNIPDFTGSFLDWALLQMEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLY-PAAXSVNVNDAIWSMYFDELLPR 546
SK R+ S E PFF + + P N+ L+ A+ VN N+ I S+Y E++P
Sbjct: 70 THSKLRRFDSPDETPFFPNDIQEPILPRINYPKILHEKASKPVNYNEKIKSIYIKEIVPL 129
Query: 547 LXKXGDDG--NYAVXXXXXXXXXXXXSXXXNYXXYVAXXXXXXXXXXXTSLI 696
+ D NY S ++ +VA T +I
Sbjct: 130 ISNSDGDSKENYGSVATRDMECLQSLSRRIHFGKFVAEAKFQSDIDLYTKMI 181
>ref|XP_753341.1| chorismate mutase [Aspergillus fumigatus Af293]
gb|EAL91303.1| chorismate mutase [Aspergillus fumigatus Af293]
Length = 266
Score = 71.2 bits (173), Expect = 4e-11
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRL---NASFV 342
+S ++ L L +R L R EDTI F LIER ++PLN+ Y P G ++ S +
Sbjct: 7 LSDASKALDLANIRFQLIRLEDTITFHLIERVQFPLNKTIYIP----GGVKIPGDEVSLM 62
Query: 343 ELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSM 522
+ +RE E +QS+ RY+S E PFF + + P + L+ VNVN+ I
Sbjct: 63 DYLLREQERLQSRVRRYESPDEYPFFPEVLEKPILQPLEYPKILHD--NDVNVNEIIKKR 120
Query: 523 YFDELLP 543
Y + +LP
Sbjct: 121 YIENILP 127
>ref|XP_713068.1| chorismate mutase [Candida albicans SC5314]
ref|XP_713036.1| chorismate mutase [Candida albicans SC5314]
gb|EAK93949.1| hypothetical protein CaO19.8763 [Candida albicans SC5314]
gb|EAK93911.1| hypothetical protein CaO19.1170 [Candida albicans SC5314]
Length = 268
Score = 70.1 bits (170), Expect = 9e-11
Identities = 40/126 (31%), Positives = 67/126 (53%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELF 351
+ P T L L +R L R EDTIVF LIER+++ + P+ + + +F+E
Sbjct: 4 MKPETV-LDLANIRQALVRMEDTIVFDLIERSQF-FSSPSVYEKNKYNIPNFDGTFLEWA 61
Query: 352 IRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFD 531
+ + E S+ RY++ E PFF ++ + + PP N+ L + +NVN I Y D
Sbjct: 62 LLQLEVAHSQIRRYEAPDETPFFPDQLKTPILPPINYPKILAKYSDEINVNSEIMKFYVD 121
Query: 532 ELLPRL 549
E++P++
Sbjct: 122 EIVPQV 127
>gb|AAF87954.1| chorismate mutase [Pichia angusta]
Length = 280
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/124 (31%), Positives = 64/124 (51%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELF 351
+ P T L L +RD L R EDTI+F+ IER+++ + Y ++ + SF++
Sbjct: 4 MKPETV-LDLGNIRDALVRMEDTIIFNFIERSQFYASPSVYK-VNQFPIPNFDGSFLDWL 61
Query: 352 IRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFD 531
+ + E + S+ RY + E+PFF + P N+ S L A +NVN I +Y
Sbjct: 62 LSQHERIHSQVRRYDAPDEVPFFPNVLEKTFLPKINYPSVLASYADEINVNKEILKIYTS 121
Query: 532 ELLP 543
E++P
Sbjct: 122 EIVP 125
>ref|XP_389778.1| hypothetical protein FG09602.1 [Gibberella zeae PH-1]
gb|EAA76153.1| hypothetical protein FG09602.1 [Gibberella zeae PH-1]
Length = 194
Score = 68.6 bits (166), Expect = 2e-10
Identities = 42/110 (38%), Positives = 58/110 (52%)
Frame = +1
Query: 214 DFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAVQSKAGRY 393
D +R EDTI F LIER ++ LN Y P + N SF++ + RE E +QS R+
Sbjct: 22 DSRSRLEDTITFHLIERVQFALNSTIYAP-GAVELPESNLSFLDWYFREQEKLQSLIRRF 80
Query: 394 QSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
+S E PFF + + P N+ LY VNVND I + Y ++ LP
Sbjct: 81 ESPDEYPFFPDALQKPILKPLNYPRILY--ENDVNVNDKIKAFYTEKFLP 128
>gb|AAS51594.1| ADL326Wp [Ashbya gossypii ATCC 10895]
ref|NP_983770.1| ADL326Wp [Eremothecium gossypii]
Length = 259
Score = 67.0 bits (162), Expect = 7e-10
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRR-LNASFVELFIRESEA 369
L+LD +R L R EDTI+F+ IER+ +P Y H + SF++ E
Sbjct: 10 LNLDHIRHELVRMEDTIIFNFIERSYFPTCPVVYHANHERLPLPDFDGSFLDWAHMHMEM 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
QS+ R+++ ++PF+ + + PP + L P A +N ND I ++Y D ++P
Sbjct: 70 TQSQLRRFEAPDQVPFYPGSILPPILPPVQYPKLLAPYAPQINYNDRIKAIYLDSVVP 127
>ref|XP_961975.1| hypothetical protein [Neurospora crassa N150]
ref|XP_328431.1| hypothetical protein [Neurospora crassa]
gb|EAA32739.1| hypothetical protein [Neurospora crassa]
Length = 269
Score = 67.0 bits (162), Expect = 7e-10
Identities = 42/117 (35%), Positives = 62/117 (52%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAV 372
L L +R L R EDTI+F LIER ++PLN+ Y P + + S ++ ++ + E +
Sbjct: 14 LDLSRIRYQLIRLEDTIIFHLIERVQFPLNKNIYIP-GAVPLPDTDLSLMDWYLWQQERL 72
Query: 373 QSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLP 543
QS RY+S E PFF V + ++ L+P +VNVND I Y + LP
Sbjct: 73 QSLMRRYESPDEYPFFPDAVQKPILESIDYPQILHP--NNVNVNDQIKEFYTQKFLP 127
>ref|XP_451906.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH02299.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 260
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDP-LHSAAGRRLNASFVELFIRESEA 369
L L +RD L + EDTI+F+ IER+ + Y+ + + SF++ + + E
Sbjct: 10 LDLQNIRDELVKMEDTIIFNFIERSHFATCSSVYESNVPEIKLPDFDGSFLDWALMKMEI 69
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
V S+ R++S E PFF ++ + P N+ L A +N ND I S+Y ++P L
Sbjct: 70 VHSQLRRFESPDETPFFPDKILKPIIPSLNYPKILASYANQINYNDKIKSIYIKTIVPLL 129
Query: 550 XK 555
K
Sbjct: 130 SK 131
>dbj|BAD26595.1| chorismate mutase [Nicotiana tabacum]
Length = 179
Score = 62.8 bits (151), Expect = 1e-08
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +1
Query: 370 VQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRL 549
+QSK GRY S +E PFF ++P+++ PP T L+PAA VNVN+ I +Y +LLP
Sbjct: 1 LQSKVGRYLSSEENPFFPDKLPASIIPPSKCTPVLHPAAECVNVNEKILDVYKKQLLPLF 60
Query: 550 --XKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
+ D+ N+A S +Y +VA
Sbjct: 61 CTDQADDEENFATTASCDIQLLQALSRRIHYGKFVA 96
>emb|CAG89818.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_461407.1| hypothetical protein DEHA0F26004g [Debaryomyces hansenii CBS767]
Length = 267
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELF 351
+ P T L L+ +R L R ED+IVF LIER+++ + Y+P + N SF+
Sbjct: 4 MKPETV-LDLNNIRHALMRMEDSIVFDLIERSQFYSSPSVYEP-NKFQIPNFNRSFLAWS 61
Query: 352 IRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFD 531
+ + E S+ RY++ E PFF + + P + L + V ND I Y +
Sbjct: 62 LLQMEKTHSQVRRYEAPDETPFFPSELLPSFLPSIKYPKILASYSDEVTANDQILKTYVE 121
Query: 532 ELLPRLX-KXGD 564
+++P++ K G+
Sbjct: 122 QIVPQISCKTGE 133
>gb|AAB69323.1| cytosolic chorismate mutase 2 [Petroselinum crispum]
Length = 82
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = +1
Query: 430 VPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLXKXGDDGNYAVXXXXXXXXX 609
+PS+L P YN L+P A ++N+N+ IW Y ++LLP GDDGNY
Sbjct: 6 LPSSLLPQYNHPQILHPTAAAININETIWDAYVNQLLPLFTTEGDDGNYVPTATSDLQCL 65
Query: 610 XXXSXXXNYXXYVA 651
S +Y +VA
Sbjct: 66 QAISRRIHYGKFVA 79
>gb|AAB69322.2| plastidic chorismate mutase 1 [Petroselinum crispum]
Length = 70
Score = 59.7 bits (143), Expect = 1e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 430 VPSALAPPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLXKXGDDGNY 576
+P ++PP + L+P S+N+N IW MYF L+PRL K G+DGNY
Sbjct: 4 LPEPISPPLQYPQVLHPVTESININSKIWDMYFRNLVPRLVKEGEDGNY 52
>gb|EAQ87889.1| hypothetical protein CHGG_04508 [Chaetomium globosum CBS 148.51]
Length = 152
Score = 41.2 bits (95), Expect = 0.042
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 172 VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDP--LHS 309
+S S+ L L +R L R EDTI F LIER ++PLN Y P +HS
Sbjct: 7 LSESSKALDLSRIRFQLIRLEDTITFHLIERVQFPLNPNIYTPGAIHS 54
>emb|CAF94983.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1223
Score = 36.6 bits (83), Expect = 1.0
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 102 SNGRARHPYAAPPVHHGGGADRPRVPV------HRRAQPGHGEGLPDAGGGHHCVQPHRE 263
++G AR P A PP PV HR+A+ G G LP AGG H V PH E
Sbjct: 970 ASGGARAPPAGPPACCSSSLLAAAEPVRQVHLRHRQAELG-GHLLPAAGGAQHHVPPHGE 1028
Query: 264 GQV 272
Q+
Sbjct: 1029 AQL 1031
>gb|EAM72608.1| hypothetical protein KradDRAFT_4367 [Kineococcus radiotolerans
SRS30216]
ref|ZP_00619647.1| hypothetical protein KradDRAFT_4367 [Kineococcus radiotolerans
SRS30216]
Length = 288
Score = 36.6 bits (83), Expect = 1.0
Identities = 28/65 (43%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Frame = +3
Query: 93 NRDSNGRARHPYAAPP--------VHHGGGADRPRVPVHRRAQPG-HGEGLPDAGGGHHC 245
+R GR P APP HHG GA RPR RRA PG H G A G HH
Sbjct: 2 DRRRRGRDAPPARAPPRRRHGRTRRHHGPGAPRPR---PRRADPGAHAAG---AHGHHHL 55
Query: 246 VQPHR 260
P R
Sbjct: 56 RSPRR 60
>emb|CAF90568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 637
Score = 35.8 bits (81), Expect = 1.8
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 123 PYAAPPVHHGGGADRPRVPVHRRAQPGHGEGLPDAGGGH 239
P PP HGG R R+PVH Q H E LP H
Sbjct: 552 PARLPPQTHGGAHGRARLPVHHVRQAFHPEELPQRAHAH 590
>ref|XP_780346.1| PREDICTED: similar to Headcase protein homolog (hHDC)
[Strongylocentrotus purpuratus]
Length = 695
Score = 35.4 bits (80), Expect = 2.3
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 114 ARHPYAAPPV---HHGGGADRPRVPVHRRAQPGHGEGLPD 224
+ H Y PP+ HH GG +R P +R +Q HG G PD
Sbjct: 333 SHHDYHGPPMNMPHHQGGNNRQTPPTNRASQFHHGGGPPD 372
>ref|XP_945507.1| PREDICTED: similar to Ig gamma-2B chain C region, membrane-bound
form [Homo sapiens]
Length = 147
Score = 35.4 bits (80), Expect = 2.3
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 96 RDSNGRARHPYAAPPVHHGGGADRPRVPVHRRAQPGHGEGLPDAGGG 236
R RA H + APP GG A R P G +GLP A GG
Sbjct: 13 RKHGHRAPHEHKAPPWLAGGSAQSQRAPDRVLCHSGQQQGLPRAAGG 59
>ref|YP_478766.1| hypothetical protein CYB_2571 [Cyanobacteria bacterium Yellowstone
B-Prime]
gb|ABD03503.1| putative membrane protein [Cyanobacteria bacterium Yellowstone
B-Prime]
Length = 166
Score = 34.7 bits (78), Expect = 4.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 28 LPLLAPAKSPRF-----LSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVS 177
+P+ AP RF L L T +T +A++ + P LLCT++ V TG++S
Sbjct: 43 IPIPAPPAGIRFAMQVVLGILLGTKLTADTLLALKDLWRPALLCTVIAVSTGVLS 97
>dbj|BAA80061.1| 105aa long hypothetical protein [Aeropyrum pernix K1]
Length = 105
Score = 34.7 bits (78), Expect = 4.0
Identities = 25/57 (43%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Frame = +3
Query: 120 HPYAAPPVHHGGGADRPRVPVHRRAQPGHG------EGLPDAGGGHH---CVQPHRE 263
H PPV DR VHRR QPG G E PD GHH CV PHR+
Sbjct: 39 HQGPRPPV------DRRLQEVHRRPQPGGGVLRGGEEASPD--NGHHVPDCVPPHRQ 87
>emb|CAC12075.1| aspartyl-tRNA synthetase related protein [Thermoplasma acidophilum]
sp|Q9HJM1|SYD_THEAC Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
ref|NP_394405.1| aspartyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
Length = 428
Score = 34.3 bits (77), Expect = 5.2
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 250 SLIERAKYPLNRPAYDPLHSAAGRRLNASFVELFIRESEA---VQSKA--GRYQSLQEIP 414
S++ A+ PL P DP+ + RLN+ F++L R A ++S G Q L
Sbjct: 92 SIVNEAEAPLPLPVVDPVQADLETRLNSRFMDLRKRNISAIFRIESALLWGIRQYLHSQK 151
Query: 415 FFAYRVPSALAPPYNFTSDLYP 480
F P +A SDL+P
Sbjct: 152 FIEVHTPKIVAAATEGGSDLFP 173
>gb|AAA28266.1| putative
Length = 61
Score = 33.9 bits (76), Expect = 6.8
Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = +3
Query: 123 PYAAPPVHH------GGGADRPRVPVHRRAQPGHGEGLPDAGGGHHCVQPHREGQV 272
P AA PVHH G R VPVHRRA + P G V P EGQV
Sbjct: 3 PQAAHPVHHPAAHVPGEEVSREAVPVHRRASGILKQPQPHRDSGQDLV-PEPEGQV 57
>gb|AAQ09894.1| BcDNA:GH06048 [Drosophila yakuba]
Length = 424
Score = 33.5 bits (75), Expect = 8.8
Identities = 23/56 (41%), Positives = 24/56 (42%)
Frame = +3
Query: 99 DSNGRARHPYAAPPVHHGGGADRPRVPVHRRAQPGHGEGLPDAGGGHHCVQPHREG 266
D GR H PP GG D P P QPG GLPD GG PH+ G
Sbjct: 209 DPEGRPPHQSGGPPDPEGGPPDLPGEP---PKQPG---GLPDLPGG----SPHQPG 254
>ref|ZP_00677188.1| PAS:GGDEF [Pelobacter propionicus DSM 2379]
gb|EAO37308.1| PAS:GGDEF [Pelobacter propionicus DSM 2379]
Length = 690
Score = 33.5 bits (75), Expect = 8.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 117 RHPYAAPPVHHGGGADRPRVPVHRRAQPGHGEGLP--DAGGGHHCV 248
RH + P HHG +P +R QP G GLP + G H +
Sbjct: 3 RHTISPPSRHHGNSTAPEALPANRSQQPNLGSGLPPFELQAGPHAI 48
>ref|ZP_00471735.1| hypothetical protein CsalDRAFT_2700 [Chromohalobacter salexigens
DSM 3043]
gb|EAM24833.1| hypothetical protein CsalDRAFT_2700 [Chromohalobacter salexigens
DSM 3043]
Length = 527
Score = 33.5 bits (75), Expect = 8.8
Identities = 34/117 (29%), Positives = 48/117 (41%)
Frame = +1
Query: 1 GGLGKSSPHLPLLAPAKSPRFLSPRLAXSKTTETAMAVRAIHTPLLLCTMVVVLTGLVSP 180
GGLG LLA PR S RL T + V + L+L T L +P
Sbjct: 125 GGLGH------LLATLPRPRRPSARL-------TLVGVLVVSAGLVLLGPTRHTTWLGTP 171
Query: 181 STAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAGRRLNASFVELF 351
L+ R + T + + R++ PL+ P PL AGR + +FVE +
Sbjct: 172 GVGLLADQVTRAYATHAAVRDFDAQLTRSETPLDAPEGHPLPGLAGRDVILAFVESY 228
>ref|ZP_00657270.1| hypothetical protein NocaDRAFT_3404 [Nocardioides sp. JS614]
gb|EAO07932.1| hypothetical protein NocaDRAFT_3404 [Nocardioides sp. JS614]
Length = 351
Score = 33.5 bits (75), Expect = 8.8
Identities = 25/62 (40%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Frame = +3
Query: 111 RARHPYAAPPVHHG-------GGADRPRVPVHRRAQPGHGEGLPDAG---GGHHCVQPHR 260
R R YA P V HG GG DR P R A P G PD G HH HR
Sbjct: 61 RERGRYAEPRVRHGELRRHPGGGPDRDGRPRDRDADPAPGAARPDRGRWPADHH---GHR 117
Query: 261 EG 266
G
Sbjct: 118 AG 119
>ref|XP_901011.1| PREDICTED: hypothetical protein XP_895918 [Mus musculus]
Length = 607
Score = 33.5 bits (75), Expect = 8.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 117 RHPYAAPPVHHGGGADRPRVPVHRRAQPGHGEGLPDAG 230
+HPY PP+ H G D P P+H A P G + G
Sbjct: 82 QHPYTGPPI-HTTGQDHPSTPLHGAAHPQLGPAVSYEG 118
>ref|ZP_00985080.1| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase
domains [Burkholderia dolosa AUO158]
Length = 686
Score = 33.5 bits (75), Expect = 8.8
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 8 SANHRLIFLFSHLRSPPAFYXXXXXXXXXXXXXXXCAPSIRRSSCAPW 151
+A+HR I +F R P C P+IRRSSC W
Sbjct: 610 AASHRTIRIFRTFRCEPRKAGGSARRSLRRPATGSCRPTIRRSSCGSW 657
>ref|XP_419109.1| PREDICTED: similar to rotatin [Gallus gallus]
Length = 834
Score = 33.5 bits (75), Expect = 8.8
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 118 AIHTPLLLCTMVVVLTGL--VSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPA 291
A+ TP LL + +L L V+P G++L RD LT + +L+ER L P
Sbjct: 222 AVVTPALLSAVCSLLHNLLIVTPKDTGIALQ--RDLLTALSSLVSANLVERCVLKLKAPL 279
Query: 292 YDPLHS 309
+P H+
Sbjct: 280 GNPCHT 285
>dbj|BAA80133.1| 125aa long hypothetical protein [Aeropyrum pernix K1]
ref|NP_147742.1| hypothetical protein APE1148 [Aeropyrum pernix K1]
Length = 125
Score = 33.5 bits (75), Expect = 8.8
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 135 PPVHHGGGADRPRVPVHRRAQPGHGEGLPDAGGGH 239
P +H GGA R R RR GHG G P GH
Sbjct: 80 PHIHRPGGACRGREDGPRRPHNGHGAGGPGGAAGH 114
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,125,538,220
Number of Sequences: 3454138
Number of extensions: 20294668
Number of successful extensions: 71022
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 68108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70863
length of database: 1,185,965,366
effective HSP length: 127
effective length of database: 747,289,840
effective search space used: 96400389360
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)