BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.1
(393 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_473290.1| OSJNBa0081C01.26 [Oryza sativa (japonica c... 118 6e-26
ref|XP_466988.1| putative LIM domain protein PLIM-2 [Oryza ... 116 2e-25
ref|NP_922207.1| putative LIM domain protein [Oryza sativa ... 103 1e-21
gb|AAF78411.1| Contains similarity to mRNA for transcriptio... 103 1e-21
ref|NP_171683.1| zinc ion binding [Arabidopsis thaliana] 103 1e-21
ref|NP_182104.1| zinc ion binding [Arabidopsis thaliana] >g... 102 2e-21
gb|AAF75828.1| LIM domain protein PLIM-2 [Nicotiana tabacum] 101 5e-21
ref|NP_191682.2| zinc ion binding [Arabidopsis thaliana] >g... 96 4e-19
gb|AAF75284.1| LIM domain protein PLIM-2 [Helianthus annuus... 94 9e-19
ref|NP_001030870.1| zinc ion binding [Arabidopsis thaliana]... 90 2e-17
emb|CAA62744.1| transcription factor L2 [Arabidopsis thaliana] 90 2e-17
emb|CAA71891.1| LIM-domain SF3 protein [Nicotiana tabacum] ... 88 8e-17
emb|CAB71053.1| LIM domain protein [Arabidopsis thaliana] 88 8e-17
gb|AAL38006.1| LIM domain protein [Gossypium hirsutum] 87 1e-16
ref|NP_181519.1| zinc ion binding [Arabidopsis thaliana] >g... 86 4e-16
gb|AAD56948.1| LIM domain protein WLIM1 [Nicotiana tabacum] 82 4e-15
dbj|BAA82827.1| transcription factor Ntlim1 [Nicotiana taba... 82 6e-15
gb|ABA99040.1| pollen specific LIM domain protein 1b [Oryza... 81 1e-14
dbj|BAB84584.1| transcription factor LIM [Nicotiana tabacum] 80 2e-14
dbj|BAD91881.1| transcription factor lim1 [Eucalyptus camal... 80 2e-14
dbj|BAB84582.1| transcription factor LIM [Populus kitakamie... 80 2e-14
dbj|BAB84581.1| transcription factor LIM [Populus kitakamie... 80 2e-14
gb|ABB51648.1| LIM domain protein [Brassica napus] >gi|7892... 79 3e-14
gb|AAF67835.1| LIM transcription factor homolog [Zea mays] 79 4e-14
gb|AAD32870.1| F14N23.8 [Arabidopsis thaliana] 79 4e-14
ref|NP_172491.1| transcription factor/ zinc ion binding [Ar... 79 4e-14
gb|AAX95760.1| putative pollen specific LIM domain protein ... 79 5e-14
gb|AAD39103.1| LIM domain protein WLIM-1 [Helianthus annuus] 78 6e-14
gb|AAD56959.1| LIM domain protein WLIM1 [Helianthus annuus] 78 6e-14
ref|NP_912352.1| putative LIM-domain protein [Oryza sativa ... 77 1e-13
gb|AAD56957.1| LIM domain protein PLIM1b [Helianthus annuus] 75 4e-13
gb|AAD02543.1| PGPS/D1 [Petunia x hybrida] 75 4e-13
emb|CAA45731.1| Transcription factor SF3 [Helianthus annuus... 75 4e-13
gb|AAD56950.1| LIM domain protein PLIM1 [Nicotiana tabacum] 75 7e-13
gb|AAF13231.1| pollen specific LIM domain protein 1a [Nicot... 75 7e-13
gb|AAF13232.1| pollen specific LIM domain protein 1b [Nicot... 75 7e-13
dbj|BAB84583.1| transcription factor LIM [Nicotiana tabacum] 71 1e-11
dbj|BAD37892.1| putative pollen-specific LIM domain protein... 62 4e-09
emb|CAG11748.1| unnamed protein product [Tetraodon nigrovir... 61 8e-09
ref|NP_001031545.1| zinc ion binding [Arabidopsis thaliana] 60 2e-08
gb|AAZ95169.1| putative transcription factor LIM [Brassica ... 59 3e-08
emb|CAG04962.1| unnamed protein product [Tetraodon nigrovir... 59 5e-08
gb|AAK49580.1| transcription factor L2 [Arabidopsis thaliana] 57 2e-07
emb|CAF90059.1| unnamed protein product [Tetraodon nigrovir... 56 3e-07
ref|XP_688621.1| PREDICTED: similar to epithelial protein l... 55 8e-07
emb|CAG32763.1| hypothetical protein [Gallus gallus] >gi|57... 55 8e-07
dbj|BAC05086.1| unnamed protein product [Homo sapiens] 54 1e-06
ref|NP_001019789.1| cardiomyopathy associated 3 [Mus muscul... 54 1e-06
gb|AAH73329.1| MGC80738 protein [Xenopus laevis] 54 1e-06
gb|AAH74410.1| MGC84409 protein [Xenopus laevis] 54 1e-06
gb|AAH88558.1| Hypothetical protein LOC496845 [Xenopus trop... 54 1e-06
dbj|BAC41743.1| hypothetical protein [Macaca fascicularis] 54 1e-06
gb|AAH98855.1| Hypothetical protein LOC360646 [Rattus norve... 54 2e-06
ref|XP_688205.1| PREDICTED: similar to Epithelial protein l... 54 2e-06
gb|AAH47797.1| Epithelial protein lost in neoplasm [Danio r... 53 3e-06
ref|NP_571739.1| epithelial protein lost in neoplasm [Danio... 53 3e-06
gb|AAH84208.1| LOC495252 protein [Xenopus laevis] 53 3e-06
emb|CAG07233.1| unnamed protein product [Tetraodon nigrovir... 53 3e-06
ref|XP_635661.1| hypothetical protein DDB0188965 [Dictyoste... 53 3e-06
dbj|BAC03855.1| unnamed protein product [Homo sapiens] >gi|... 52 4e-06
gb|AAK67634.1| hypothetical protein SB143 [Homo sapiens] 52 4e-06
ref|XP_887351.1| PREDICTED: similar to Epithelial protein l... 52 4e-06
ref|XP_612416.2| PREDICTED: similar to Epithelial protein l... 52 4e-06
gb|AAH68130.1| Hypothetical protein LOC67803 [Mus musculus]... 52 4e-06
ref|XP_886169.1| PREDICTED: similar to epithelial protein l... 52 4e-06
ref|XP_853364.1| PREDICTED: similar to epithelial protein l... 52 4e-06
ref|XP_911481.1| PREDICTED: similar to epithelial protein l... 52 4e-06
ref|XP_887364.1| PREDICTED: similar to Epithelial protein l... 52 4e-06
gb|AAH01247.2| LIMA1 protein [Homo sapiens] 52 5e-06
dbj|BAC39353.1| unnamed protein product [Mus musculus] 52 5e-06
gb|AAG17267.1| unknown [Homo sapiens] 52 5e-06
dbj|BAA90914.1| unnamed protein product [Homo sapiens] 52 5e-06
dbj|BAB14625.1| unnamed protein product [Homo sapiens] 52 6e-06
gb|AAF23756.1| epithelial protein lost in neoplasm alpha [H... 52 6e-06
gb|AAF67491.1| sterol regulatory element binding protein 3 ... 52 6e-06
dbj|BAA91092.1| unnamed protein product [Homo sapiens] 52 6e-06
dbj|BAE21099.1| unnamed protein product [Mus musculus] >gi|... 52 6e-06
dbj|BAC25798.1| unnamed protein product [Mus musculus] 52 6e-06
dbj|BAD92749.1| epithelial protein lost in neoplasm beta va... 52 6e-06
gb|AAG31147.1| epithelial protein lost in neoplasm-a [Mus m... 52 6e-06
dbj|BAD96691.1| epithelial protein lost in neoplasm beta va... 52 6e-06
gb|AAI10816.1| Epithelial protein lost in neoplasm beta [Ho... 52 6e-06
ref|XP_509057.1| PREDICTED: epithelial protein lost in neop... 52 6e-06
gb|AAH31490.1| D15Ertd366e protein [Mus musculus] 52 6e-06
dbj|BAC33699.1| unnamed protein product [Mus musculus] 52 6e-06
gb|AAG31148.1| epithelial protein lost in neoplasm-b [Mus m... 52 6e-06
sp|Q9ERG0|EPLIN_MOUSE Epithelial protein lost in neoplasm (... 52 6e-06
dbj|BAA91120.1| unnamed protein product [Homo sapiens] 52 6e-06
gb|AAA85718.1| mutant sterol regulatory element binding pro... 52 6e-06
ref|XP_217039.3| PREDICTED: similar to Epithelial protein l... 52 6e-06
ref|XP_534804.2| PREDICTED: similar to Epithelial protein l... 51 8e-06
ref|XP_424485.1| PREDICTED: similar to epithelial protein l... 51 8e-06
ref|XP_629012.1| hypothetical protein DDB0192012 [Dictyoste... 50 1e-05
ref|XP_629013.1| hypothetical protein DDB0219875 [Dictyoste... 49 4e-05
gb|AAH96905.1| LOC559746 protein [Danio rerio] 49 5e-05
ref|XP_684609.1| PREDICTED: similar to MGC84409 protein [Da... 47 1e-04
emb|CAG12362.1| unnamed protein product [Tetraodon nigrovir... 47 1e-04
ref|XP_794558.1| PREDICTED: similar to epithelial protein l... 47 2e-04
gb|AAX26577.2| SJCHGC02485 protein [Schistosoma japonicum] 45 5e-04
ref|XP_886154.1| PREDICTED: similar to epithelial protein l... 45 8e-04
ref|XP_642140.1| hypothetical protein DDB0214931 [Dictyoste... 40 0.019
ref|XP_650090.1| LIM domain protein [Entamoeba histolytica ... 40 0.019
gb|AAW25420.1| SJCHGC06351 protein [Schistosoma japonicum] 39 0.043
gb|AAX30635.2| SJCHGC06220 protein [Schistosoma japonicum] 39 0.043
ref|XP_393163.2| PREDICTED: similar to LIM domain protein [... 39 0.056
ref|XP_649298.1| LIM domain protein [Entamoeba histolytica ... 39 0.056
gb|AAH61131.1| Cysteine and glycine-rich protein 3 [Mus mus... 36 0.28
ref|XP_479570.1| putative r40c1 protein [Oryza sativa (japo... 36 0.36
emb|CAA57065.1| muscle LIM protein [Rattus norvegicus] >gi|... 36 0.36
ref|NP_001019860.1| cysteine- and glycine-rich protein 3 [B... 36 0.36
gb|AAX26574.2| SJCHGC02486 protein [Schistosoma japonicum] 35 0.47
gb|AAT85555.1| BS004P [Gekko japonicus] >gi|49659874|gb|AAT... 34 1.4
ref|XP_852328.1| PREDICTED: similar to Cysteine and glycine... 34 1.4
ref|XP_865543.1| PREDICTED: similar to Cysteine and glycine... 34 1.4
ref|XP_644531.1| hypothetical protein DDB0217328 [Dictyoste... 33 1.8
ref|XP_504984.1| YlTSR1 [Yarrowia lipolytica] >gi|49650854|... 33 1.8
gb|EAL31557.1| GA18482-PA [Drosophila pseudoobscura] 33 2.4
ref|XP_390611.1| hypothetical protein FG10435.1 [Gibberella... 33 2.4
gb|AAH83395.1| Zgc:103468 [Danio rerio] >gi|54400554|ref|NP... 33 2.4
gb|AAP78680.1| MBCTL1 [Monosiga brevicollis] 33 2.4
ref|XP_760515.1| hypothetical protein UM04368.1 [Ustilago m... 33 3.1
ref|XP_641675.1| hypothetical protein DDB0214939 [Dictyoste... 33 3.1
ref|XP_420911.1| PREDICTED: similar to murine muscle LIM pr... 33 3.1
ref|XP_582016.2| PREDICTED: similar to Protein MICAL-3 [Bos... 33 3.1
emb|CAF99976.1| unnamed protein product [Tetraodon nigrovir... 32 4.0
ref|XP_865526.1| PREDICTED: similar to Cysteine and glycine... 32 4.0
ref|NP_003467.1| cysteine and glycine-rich protein 3 [Homo ... 32 4.0
gb|AAF28868.1| myogenic factor LIM3 [Homo sapiens] 32 4.0
gb|EAM74978.1| 4Fe-4S ferredoxin, iron-sulfur binding:Prote... 32 4.0
gb|AAN71469.1| RE67887p [Drosophila melanogaster] 32 5.2
ref|XP_695229.1| PREDICTED: similar to Protein MICAL-3 [Dan... 32 5.2
gb|AAH76911.1| Cysteine and glycine-rich protein 2 [Xenopus... 32 5.2
ref|NP_001014704.1| CG33521-PB, isoform B [Drosophila melan... 32 5.2
gb|AAM50001.1| RE73965p [Drosophila melanogaster] 32 5.2
ref|NP_001014705.1| CG33521-PC, isoform C [Drosophila melan... 32 5.2
emb|CAI20684.1| novel protein similar to vertebrate flavopr... 32 5.2
ref|NP_733106.2| CG31439-PA [Drosophila melanogaster] >gi|5... 32 5.2
ref|XP_696043.1| PREDICTED: similar to Protein MICAL-3 [Dan... 32 5.2
gb|AAB81493.1| LIM domain protein [Drosophila yakuba] 32 6.8
gb|ABA55664.1| Hoglet [Monosiga ovata] 31 8.9
emb|CAE73949.1| Hypothetical protein CBG21573 [Caenorhabdit... 31 8.9
>ref|XP_473290.1| OSJNBa0081C01.26 [Oryza sativa (japonica cultivar-group)]
emb|CAE04568.1| OSJNBb0039L24.7 [Oryza sativa (japonica cultivar-group)]
emb|CAE54551.1| OSJNBa0081C01.26 [Oryza sativa (japonica cultivar-group)]
Length = 201
Score = 118 bits (295), Expect = 6e-26
Identities = 62/108 (57%), Positives = 62/108 (57%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KCT CDK HFIDLLT YHKT HCKG SM YSSMD LYCKT
Sbjct: 1 MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK F P S L R PSK S QD A
Sbjct: 61 HFEQLFKETGSFSKKFAP-GCRSTDKELARAPSKICSAFSGTQDKCAA 107
Score = 53.9 bits (128), Expect = 1e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
+F+G KC C K + ++ LT YHK+ H + Y++++ LYCK H
Sbjct: 97 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 156
Query: 252 FXQLFKXTGSFS 287
F QLF GS++
Sbjct: 157 FGQLFMEKGSYN 168
>ref|XP_466988.1| putative LIM domain protein PLIM-2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD25371.1| putative LIM domain protein PLIM-2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD25223.1| putative LIM domain protein PLIM-2 [Oryza sativa (japonica
cultivar-group)]
Length = 206
Score = 116 bits (290), Expect = 2e-25
Identities = 59/108 (54%), Positives = 60/108 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK HFIDLLT YHKT HCKG SM YSSMD LYCKT
Sbjct: 1 MSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK F+ S R PSK S QD A
Sbjct: 61 HFEQLFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSSAFSGTQDKCAA 108
Score = 57.8 bits (138), Expect = 9e-08
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F+G KC C K + ++ LT YHK+ H + Y++++
Sbjct: 90 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 149
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYCK HF QLFK GS++
Sbjct: 150 GILYCKIHFSQLFKEKGSYN 169
>ref|NP_922207.1| putative LIM domain protein [Oryza sativa (japonica
cultivar-group)]
gb|AAG13621.1| putative LIM domain protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP54494.1| LIM domain protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 224
Score = 103 bits (258), Expect = 1e-21
Identities = 52/108 (48%), Positives = 58/108 (53%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F+G KC CDK HFIDLLT YHK+ HCKG SM YSSMD LYCKT
Sbjct: 1 MTFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKT 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TG+F KNF + + PSK QD A
Sbjct: 61 HFEQLFKETGTFKKNFPSGTKANSEQ--AKIPSKLSSVFCGTQDKCTA 106
Score = 56.2 bits (134), Expect = 3e-07
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KCT C K + ++ +T YH+T H + Y+S + LYC+ HF
Sbjct: 97 FCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHF 156
Query: 255 XQLFKXTGSFSKNFTPXXXXS 317
QLFK +GS+ P +
Sbjct: 157 WQLFKKSGSYDNLLKPASAAA 177
>gb|AAF78411.1| Contains similarity to mRNA for transcription factor L2 from
Arabidopsis thaliana gb|X91398. It contains LIM domain
containing proteins PF|00412. ESTs gb|T13084 and
gb|T42925 come from this gene
Length = 261
Score = 103 bits (257), Expect = 1e-21
Identities = 52/108 (48%), Positives = 60/108 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK + +D+L+ YHK+ HCKG M YSSMD LYCKT
Sbjct: 57 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 116
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK +G+FSKNF P + LTR PSK QD A
Sbjct: 117 HFEQLFKESGNFSKNFQP--GKTEKPELTRTPSKISSIFCGTQDKCAA 162
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F G KC C+K + ++ + +HKT H + Y+S+D
Sbjct: 144 RTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLD 203
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYC+ HF QLF G+++
Sbjct: 204 SVLYCRHHFNQLFMEKGNYA 223
>ref|NP_171683.1| zinc ion binding [Arabidopsis thaliana]
Length = 205
Score = 103 bits (257), Expect = 1e-21
Identities = 52/108 (48%), Positives = 60/108 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK + +D+L+ YHK+ HCKG M YSSMD LYCKT
Sbjct: 1 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK +G+FSKNF P + LTR PSK QD A
Sbjct: 61 HFEQLFKESGNFSKNFQP--GKTEKPELTRTPSKISSIFCGTQDKCAA 106
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F G KC C+K + ++ + +HKT H + Y+S+D
Sbjct: 88 RTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLD 147
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYC+ HF QLF G+++
Sbjct: 148 SVLYCRHHFNQLFMEKGNYA 167
>ref|NP_182104.1| zinc ion binding [Arabidopsis thaliana]
gb|AAC28544.1| putative LIM-domain protein [Arabidopsis thaliana]
gb|AAO64006.1| putative LIM-domain protein [Arabidopsis thaliana]
dbj|BAC42675.1| putative LIM-domain protein [Arabidopsis thaliana]
Length = 226
Score = 102 bits (255), Expect = 2e-21
Identities = 50/104 (48%), Positives = 57/104 (54%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK + +DLLT YHK+ HCKG + YSSMD LYCK
Sbjct: 1 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQD 380
HF QLFK +G++SKNF LTR PSK S QD
Sbjct: 61 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQD 104
Score = 56.2 bits (134), Expect = 3e-07
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F+G KC C K + ++ +T YHKT H + Y+S++
Sbjct: 90 RTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLN 149
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYCK HF QLF GS++
Sbjct: 150 GVLYCKVHFNQLFLEKGSYN 169
>gb|AAF75828.1| LIM domain protein PLIM-2 [Nicotiana tabacum]
Length = 212
Score = 101 bits (252), Expect = 5e-21
Identities = 50/108 (46%), Positives = 60/108 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+FTG KC+ CDK +F+DLL+ YHK+ HCKG M YSSM+ LYCK
Sbjct: 1 MAFTGTLDKCSACDKTVYFVDLLSADGVTYHKSCFKCSHCKGTLVMSNYSSMEGVLYCKH 60
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK +G+F+KNF LTR PSK S QD A
Sbjct: 61 HFEQLFKESGNFTKNF-QNSKAERQNSLTRAPSKLSAMFSGTQDKCAA 107
Score = 55.5 bits (132), Expect = 4e-07
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F+G KC CDK + ++ +T +HK+ H + Y+S+D
Sbjct: 89 RAPSKLSAMFSGTQDKCAACDKTVYPLEKVTMEGESFHKSCFKCAHGGCPLTHATYASLD 148
Query: 228 XXLYCKTHFXQLFKXTGSF 284
LYCK HF QLF G++
Sbjct: 149 GNLYCKHHFAQLFMEKGNY 167
>ref|NP_191682.2| zinc ion binding [Arabidopsis thaliana]
gb|AAY34164.1| At3g61230 [Arabidopsis thaliana]
Length = 213
Score = 95.5 bits (236), Expect = 4e-19
Identities = 45/107 (42%), Positives = 56/107 (52%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
+FTG KC CDK + +DL+T YHK+ HC G + YSSMD LYCKTH
Sbjct: 3 AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62
Query: 252 FXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
F QLFK +G+FSKNF T+ P++ S QD A
Sbjct: 63 FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAA 109
Score = 55.5 bits (132), Expect = 4e-07
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
+ P +S F+G KC C K + ++ +T YHKT H + Y+++D
Sbjct: 91 KAPNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALD 150
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYCK HF QLF G+++
Sbjct: 151 GVLYCKVHFSQLFLEKGNYN 170
>gb|AAF75284.1| LIM domain protein PLIM-2 [Helianthus annuus]
gb|AAD15745.1| LIM domain protein PLIM-2 [Helianthus annuus]
Length = 240
Score = 94.4 bits (233), Expect = 9e-19
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HF+DL+T IYHK HCKG M YSSMD LYC
Sbjct: 1 MAFGGTIDKCNACDKTVHFVDLMTVDNVIYHKKCFKCTHCKGTLVMSNYSSMDGVLYCMP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TG++SKNF
Sbjct: 61 HFEQLFKETGNYSKNF 76
Score = 54.7 bits (130), Expect = 8e-07
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 45 ATDRXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYS 218
+T + P S F+G KC C+K +FID +T YHK H + Y+
Sbjct: 86 STAQLPNKFSYFFSGTLDKCRICEKTVYFIDKMTMEGESYHKQCFRCVHGGCPLTHSSYA 145
Query: 219 SMDXXLYCKTHFXQLFKXTGSFS 287
+++ LYC+ HF QLF G+ S
Sbjct: 146 ALNGNLYCRHHFAQLFLEKGTLS 168
>ref|NP_001030870.1| zinc ion binding [Arabidopsis thaliana]
ref|NP_680133.2| zinc ion binding [Arabidopsis thaliana]
ref|NP_001030868.1| zinc ion binding [Arabidopsis thaliana]
ref|NP_001030869.1| zinc ion binding [Arabidopsis thaliana]
ref|NP_191136.1| zinc ion binding [Arabidopsis thaliana]
emb|CAB81602.1| transcription factor L2 [Arabidopsis thaliana]
gb|AAM14188.1| putative transcription factor L2 [Arabidopsis thaliana]
gb|AAL36280.1| putative transcription factor L2 [Arabidopsis thaliana]
gb|AAM60942.1| transcription factor L2 [Arabidopsis thaliana]
Length = 199
Score = 89.7 bits (221), Expect = 2e-17
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K + ++LL+ YHK+ HCK + YSSM+ LYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 249 HFXQLFKXTGSFSKNF-TPXXXXSXXX-XLTRXPSKXXXXXSXXQD 380
HF QLFK +GSF+KNF +P LTR PS+ S Q+
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQE 106
Score = 56.6 bits (135), Expect = 2e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + I+ +T YHK+ H S Y++++ LYCK HF
Sbjct: 101 FSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHF 160
Query: 255 XQLFKXTGSFS 287
QLFK GS++
Sbjct: 161 AQLFKEKGSYN 171
>emb|CAA62744.1| transcription factor L2 [Arabidopsis thaliana]
Length = 172
Score = 89.7 bits (221), Expect = 2e-17
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K + ++LL+ YHK+ HCK + YSSM+ LYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 249 HFXQLFKXTGSFSKNF-TPXXXXSXXX-XLTRXPSKXXXXXSXXQD 380
HF QLFK +GSF+KNF +P LTR PS+ S Q+
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQE 106
Score = 48.5 bits (114), Expect = 5e-05
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + I+ +T YHK+ H S Y++++ LYCK HF
Sbjct: 101 FSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHF 160
Query: 255 XQLFK 269
QL +
Sbjct: 161 AQLLR 165
>emb|CAA71891.1| LIM-domain SF3 protein [Nicotiana tabacum]
gb|AAD56951.1| LIM domain protein WLIM2 [Nicotiana tabacum]
Length = 189
Score = 87.8 bits (216), Expect = 8e-17
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSF G KC C+K + ++LL+ YHK+ HCKG + +SSM+ LYCK
Sbjct: 1 MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60
Query: 249 HFXQLFKXTGSFSKNF-TPXXXXSXXX-XLTRXPSKXXXXXSXXQD 380
HF QLFK +G+F+KNF +P LTR PSK S Q+
Sbjct: 61 HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQE 106
Score = 57.4 bits (137), Expect = 1e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + ++ +T YHKT H S Y++++ LYCK HF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHF 160
Query: 255 XQLFKXTGSFS 287
QLFK GS++
Sbjct: 161 SQLFKEKGSYN 171
>emb|CAB71053.1| LIM domain protein [Arabidopsis thaliana]
Length = 211
Score = 87.8 bits (216), Expect = 8e-17
Identities = 44/107 (41%), Positives = 54/107 (50%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
+FTG KC CDK + +DL+T YHK+ HC G + YSSMD LYCKTH
Sbjct: 3 AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62
Query: 252 FXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
F QLFK +G+FSKNF P++ S QD A
Sbjct: 63 FEQLFKESGNFSKNFQTAGKTEKSN--DAAPNRLSSFFSGTQDKCAA 107
Score = 57.0 bits (136), Expect = 2e-07
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 45 ATDRXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYS 218
+ D P +S F+G KC C K + ++ +T YHKT H + Y+
Sbjct: 86 SNDAAPNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYA 145
Query: 219 SMDXXLYCKTHFXQLFKXTGSFS 287
++D LYCK HF QLF G+++
Sbjct: 146 ALDGVLYCKVHFSQLFLEKGNYN 168
>gb|AAL38006.1| LIM domain protein [Gossypium hirsutum]
Length = 189
Score = 87.0 bits (214), Expect = 1e-16
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSF G KC C+K + ++LL+ YHK+ HCKG + YSSM+ LYCK
Sbjct: 1 MSFIGTQQKCKACEKTVYPVELLSADGVPYHKSCSKCSHCKGTLKLANYSSMEGVLYCKP 60
Query: 249 HFXQLFKXTGSFSKNF--TPXXXXSXXXXLTRXPSKXXXXXS 368
HF QLFK TG+F+K+F + +TR PSK S
Sbjct: 61 HFEQLFKETGNFNKDFQLSAKAAEKLTPEMTRSPSKAASMFS 102
Score = 51.6 bits (122), Expect = 6e-06
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + ++ +T Y K+ H S Y++++ LYCK HF
Sbjct: 101 FSGTVEKCATCGKTAYPLEKVTVEGQSYLKSCFKCSHGGCSLSPSNYAALEGILYCKHHF 160
Query: 255 XQLFKXTGSFS 287
QLFK GS++
Sbjct: 161 SQLFKEKGSYN 171
>ref|NP_181519.1| zinc ion binding [Arabidopsis thaliana]
gb|AAM67434.1| At2g39900/T28M21.6 [Arabidopsis thaliana]
gb|AAM19819.1| At2g39900/T28M21.6 [Arabidopsis thaliana]
gb|AAB95275.1| putative LIM-domain protein [Arabidopsis thaliana]
Length = 200
Score = 85.5 bits (210), Expect = 4e-16
Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K + ++LL+ YHK HCK + YSSM+ +YC+
Sbjct: 1 MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60
Query: 249 HFXQLFKXTGSFSKNF---TPXXXXSXXXXLTRXPSKXXXXXSXXQD 380
HF QLFK +GSFSKNF L R PS+ S QD
Sbjct: 61 HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQD 107
Score = 57.0 bits (136), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 51 DRXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSM 224
+R P ++ F+G KC C K + I+ +T YHK+ H S Y+++
Sbjct: 92 NRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAAL 151
Query: 225 DXXLYCKTHFXQLFKXTGSFS 287
+ LYCK HF QLFK GS++
Sbjct: 152 EGILYCKHHFAQLFKEKGSYN 172
>gb|AAD56948.1| LIM domain protein WLIM1 [Nicotiana tabacum]
Length = 193
Score = 82.0 bits (201), Expect = 4e-15
Identities = 35/76 (46%), Positives = 43/76 (56%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT IYHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTAYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKQTGSLDKSF 76
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
T F G KC C K + + ++ YHK+ H S Y + + LYCK
Sbjct: 100 TSMFGGTREKCFGCKKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCK 159
Query: 246 THFXQLFKXTGSFSK 290
H QL K G+ SK
Sbjct: 160 HHHIQLIKEKGNLSK 174
>dbj|BAA82827.1| transcription factor Ntlim1 [Nicotiana tabacum]
Length = 200
Score = 81.6 bits (200), Expect = 6e-15
Identities = 35/76 (46%), Positives = 43/76 (56%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT IYHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTVKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKQTGSLDKSF 76
Score = 45.4 bits (106), Expect = 5e-04
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
T F G KC C K + + ++ YHK+ H S Y++ + LYCK
Sbjct: 100 TSMFGGTREKCFGCKKTVYPTEKVSANGTPYHKSCFQCSHGGCVISPSNYTAHEGRLYCK 159
Query: 246 THFXQLFKXTGSFSK 290
H QL K G+ SK
Sbjct: 160 HHHIQLIKEKGNLSK 174
>gb|ABA99040.1| pollen specific LIM domain protein 1b [Oryza sativa (japonica
cultivar-group)]
Length = 195
Score = 80.9 bits (198), Expect = 1e-14
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
SF G KC CDK + +D LT +YHK HCKG + Y+S + LYC+ H
Sbjct: 4 SFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 63
Query: 252 FXQLFKXTGSFSKNF 296
F QLFK TGS K+F
Sbjct: 64 FDQLFKRTGSLDKSF 78
Score = 50.8 bits (120), Expect = 1e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
+F G KC C+K + I+ +T +YHK+ H S Y + + LYCK H
Sbjct: 102 AFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHH 161
Query: 252 FXQLFKXTGSFSK 290
QL K G+FS+
Sbjct: 162 HIQLIKEKGNFSQ 174
>dbj|BAB84584.1| transcription factor LIM [Nicotiana tabacum]
Length = 193
Score = 80.1 bits (196), Expect = 2e-14
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D T IYHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKFTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKQTGSLDKSF 76
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
T F G KC C K + + ++ YHK+ H S Y + + LYCK
Sbjct: 100 TSMFGGTREKCFGCKKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCK 159
Query: 246 THFXQLFKXTGSFSK 290
H QL K G+ SK
Sbjct: 160 HHHIQLIKEKGNLSK 174
>dbj|BAD91881.1| transcription factor lim1 [Eucalyptus camaldulensis]
dbj|BAD91880.1| transcription factor lim1 [Eucalyptus camaldulensis]
dbj|BAD91879.1| transcription factor lim1 [Eucalyptus globulus]
dbj|BAD91878.1| transcription factor lim1 [Eucalyptus globulus]
Length = 188
Score = 80.1 bits (196), Expect = 2e-14
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC C+K + +D LT IYHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLEKSF 76
Score = 40.8 bits (94), Expect = 0.011
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C + + +T YHK+ H S Y + + LYC+ H
Sbjct: 103 FGGTRDKCVGCKSTVYPTEKVTVNGTPYHKSCFKCTHGGCVISPSNYVAHEGKLYCRHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 TQLIKEKGNLSQ 174
>dbj|BAB84582.1| transcription factor LIM [Populus kitakamiensis]
Length = 197
Score = 79.7 bits (195), Expect = 2e-14
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT YHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 40.0 bits (92), Expect = 0.019
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C + + ++ YHK+ H S Y + + LYCK H
Sbjct: 103 FAGTREKCFGCKNTVYPTEKVSVNGTPYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 NQLIKEKGNLSQ 174
>dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]
Length = 197
Score = 79.7 bits (195), Expect = 2e-14
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT YHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 40.0 bits (92), Expect = 0.019
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C + + ++ YHK+ H S Y + + LYCK H
Sbjct: 103 FAGTREKCFGCKNTVYPTEKVSVNGTPYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 NQLIKEKGNLSQ 174
>gb|ABB51648.1| LIM domain protein [Brassica napus]
gb|ABB51614.1| LIM-domain protein [Brassica napus]
Length = 189
Score = 79.3 bits (194), Expect = 3e-14
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT +YHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGALYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF Q FK TGS K+F
Sbjct: 61 HFDQNFKRTGSLEKSF 76
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC CDK + I+ ++ +YHK+ H S Y + + LYCK H
Sbjct: 103 FGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 IQLIKEKGNLSQ 174
>gb|AAF67835.1| LIM transcription factor homolog [Zea mays]
Length = 197
Score = 79.0 bits (193), Expect = 4e-14
Identities = 35/75 (46%), Positives = 42/75 (56%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
SF G K T CDK + +D LT IYHK HCKG + Y+S + LYC+ H
Sbjct: 4 SFQGTTTKRTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 63
Query: 252 FXQLFKXTGSFSKNF 296
F QLFK TGS K+F
Sbjct: 64 FDQLFKRTGSLDKSF 78
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
+F G KC C K + + +T +YHK+ H S Y + + LYCK H
Sbjct: 102 AFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHH 161
Query: 252 FXQLFKXTGS 281
QL K G+
Sbjct: 162 HIQLIKERGT 171
>gb|AAD32870.1| F14N23.8 [Arabidopsis thaliana]
Length = 223
Score = 79.0 bits (193), Expect = 4e-14
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT +YHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF Q FK TGS K+F
Sbjct: 61 HFDQNFKRTGSLEKSF 76
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC CDK + I+ ++ +YHK+ H S Y + + LYCK H
Sbjct: 136 FGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHH 195
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 196 IQLIKEKGNLSQ 207
>ref|NP_172491.1| transcription factor/ zinc ion binding [Arabidopsis thaliana]
gb|AAM62606.1| putative transcription factor [Arabidopsis thaliana]
gb|AAK49575.1| similar to transcription factor SF3 (pir|IS37656) [Arabidopsis
thaliana]
Length = 190
Score = 79.0 bits (193), Expect = 4e-14
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT +YHK HCKG + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF Q FK TGS K+F
Sbjct: 61 HFDQNFKRTGSLEKSF 76
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC CDK + I+ ++ +YHK+ H S Y + + LYCK H
Sbjct: 103 FGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 IQLIKEKGNLSQ 174
>gb|AAX95760.1| putative pollen specific LIM domain protein [Lycopersicon
esculentum]
gb|AAX73300.1| putative pollen specific LIM domain-containing protein
[Lycopersicon esculentum]
Length = 179
Score = 78.6 bits (192), Expect = 5e-14
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
SF G KC C+K + +D LT +YHK HCKG + Y+S + LYC+ H
Sbjct: 3 SFGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 62
Query: 252 FXQLFKXTGSFSKNF 296
F QLFK TGS K+F
Sbjct: 63 FDQLFKMTGSLDKSF 77
Score = 45.4 bits (106), Expect = 5e-04
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + ++ + YH+ H S Y + + LYC+ H
Sbjct: 101 FGGTQDKCVACKKTVYPLEKVAVDGTSYHRPCFKCSHGGCVISPSNYVAHEHRLYCRHHH 160
Query: 255 XQLFKXTGSFSK 290
QLFK G+FS+
Sbjct: 161 TQLFKERGNFSQ 172
>gb|AAD39103.1| LIM domain protein WLIM-1 [Helianthus annuus]
Length = 188
Score = 78.2 bits (191), Expect = 6e-14
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT ++HK HC G + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKKTGSLDKSF 76
Score = 40.8 bits (94), Expect = 0.011
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C + + ++ YHK+ H S Y + + LYC+ H
Sbjct: 103 FVGTKDKCLGCKNTVYPTEKVSVNGTAYHKSCFKCSHGGCTISPSNYIAHEGHLYCRHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 TQLIKEKGNLSQ 174
>gb|AAD56959.1| LIM domain protein WLIM1 [Helianthus annuus]
Length = 188
Score = 78.2 bits (191), Expect = 6e-14
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT ++HK HC G + Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKKTGSLDKSF 76
Score = 40.8 bits (94), Expect = 0.011
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C + + ++ YHK+ H S Y + + LYC+ H
Sbjct: 103 FVGTKDKCLGCKNTVYPTEKVSVNGTAYHKSCFKCSHGGCTISPSNYIAHEGHLYCRHHH 162
Query: 255 XQLFKXTGSFSK 290
QL K G+ S+
Sbjct: 163 TQLIKEKGNLSQ 174
>ref|NP_912352.1| putative LIM-domain protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP06876.1| putative LIM-domain protein [Oryza sativa (japonica
cultivar-group)]
Length = 196
Score = 77.4 bits (189), Expect = 1e-13
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + +D L+ ++H++ HCK S+ YSS++ YCK HF
Sbjct: 2 FSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHF 61
Query: 255 XQLFKXTGSFSKNF-TPXXXXSXXXX--LTRXPSKXXXXXSXXQD 380
QLFK TGS++K+F +P S LTR PSK S Q+
Sbjct: 62 EQLFKETGSYNKSFQSPAKPASEKLTPELTRSPSKAARMFSGTQE 106
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + ++ +T YHK+ H S Y++++ LYCK HF
Sbjct: 101 FSGTQEKCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHF 160
Query: 255 XQLFKXTGSFS 287
QLFK GS++
Sbjct: 161 SQLFKEKGSYN 171
>gb|AAD56957.1| LIM domain protein PLIM1b [Helianthus annuus]
Length = 214
Score = 75.5 bits (184), Expect = 4e-13
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
SFTG KCT C+K + +D L +YHK HC + ++S D +YC+ H
Sbjct: 3 SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62
Query: 252 FXQLFKXTGSFSKNF 296
F QLFK TGS K+F
Sbjct: 63 FDQLFKRTGSLEKSF 77
Score = 45.4 bits (106), Expect = 5e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ + YH+ H S Y + + LYCK H
Sbjct: 103 FEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKKKGNYSQ 174
>gb|AAD02543.1| PGPS/D1 [Petunia x hybrida]
Length = 195
Score = 75.5 bits (184), Expect = 4e-13
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC+ CDK + +D L +YHK HCK + ++S + +YC+
Sbjct: 1 MTFAGTTQKCSACDKTVYLVDRLAADNRVYHKACFRCYHCKSTLKLSNFNSFEGVIYCRH 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 48.5 bits (114), Expect = 5e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ ++ YHK H S Y + + LYCK H
Sbjct: 103 FGGTRDKCVGCSKTVYPIEKVSVNGAAYHKACFKCTHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKEKGNYSQ 174
>emb|CAA45731.1| Transcription factor SF3 [Helianthus annuus]
gb|AAD56958.1| LIM domain protein PLIM1a [Helianthus annuus]
sp|P29675|SF3_HELAN Pollen-specific protein SF3
Length = 219
Score = 75.5 bits (184), Expect = 4e-13
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
SFTG KCT C+K + +D L +YHK HC + ++S D +YC+ H
Sbjct: 3 SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62
Query: 252 FXQLFKXTGSFSKNF 296
F QLFK TGS K+F
Sbjct: 63 FDQLFKRTGSLEKSF 77
Score = 45.4 bits (106), Expect = 5e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ + YH+ H S Y + + LYCK H
Sbjct: 103 FEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKKKGNYSQ 174
>gb|AAD56950.1| LIM domain protein PLIM1 [Nicotiana tabacum]
Length = 191
Score = 74.7 bits (182), Expect = 7e-13
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC+ C+K + +D L IYHK HCK + ++S + +YC+
Sbjct: 1 MTFAGTTQKCSACEKTVYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ ++ YHK H S Y + + LYCK H
Sbjct: 103 FAGTREKCVGCTKTVYPIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKEKGNYSQ 174
>gb|AAF13231.1| pollen specific LIM domain protein 1a [Nicotiana tabacum]
Length = 191
Score = 74.7 bits (182), Expect = 7e-13
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC+ C+K + +D L IYHK HCK + ++S + +YC+
Sbjct: 1 MTFAGTTQKCSACEKTVYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ ++ YHK H S Y + + LYCK H
Sbjct: 103 FAGTREKCVGCTKTVYPIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKEKGNYSQ 174
>gb|AAF13232.1| pollen specific LIM domain protein 1b [Nicotiana tabacum]
Length = 181
Score = 74.7 bits (182), Expect = 7e-13
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC+ C+K + +D L IYHK HCK + ++S + +YC+
Sbjct: 1 MTFAGTTQKCSACEKTVYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGS K+F
Sbjct: 61 HFDQLFKRTGSLDKSF 76
Score = 48.1 bits (113), Expect = 7e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C K + I+ ++ YHK H S Y + + LYCK H
Sbjct: 103 FAGTREKCVGCTKTVYPIEKVSVNGTAYHKGCFKCSHGGCTISPSNYIAHEGRLYCKHHH 162
Query: 255 XQLFKXTGSFSK 290
QLFK G++S+
Sbjct: 163 IQLFKEKGNYSQ 174
>dbj|BAB84583.1| transcription factor LIM [Nicotiana tabacum]
Length = 193
Score = 70.9 bits (172), Expect = 1e-11
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK + +D LT IYHK HCK + +S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKATLKLGNSNSFEGVLYCRP 60
Query: 249 HFXQLFKXTGSFSKNF 296
H LFK TGS K+F
Sbjct: 61 HLIGLFKQTGSLDKSF 76
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
T F G KC C K + + ++ YHK+ H S Y + + LYCK
Sbjct: 100 TSMFGGTREKCFGCKKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCK 159
Query: 246 THFXQLFKXTGSFSK 290
H QL K G+ SK
Sbjct: 160 HHHIQLIKEKGNLSK 174
>dbj|BAD37892.1| putative pollen-specific LIM domain protein [Oryza sativa (japonica
cultivar-group)]
Length = 1303
Score = 62.4 bits (150), Expect = 4e-09
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C + + ++ L +YH+ HCK YSS++ LYCK H+ Q
Sbjct: 8 GTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYDQ 67
Query: 261 LFKXTGSFSKNF 296
+ K TGS K+F
Sbjct: 68 ILKSTGSLEKSF 79
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC C+K + ++ + YHK+ H S + + LYCKTH
Sbjct: 105 FVGTQDKCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHH 164
Query: 255 XQLFKXTGSFS 287
QLF G+FS
Sbjct: 165 SQLFMVKGNFS 175
>emb|CAG11748.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 61.2 bits (147), Expect = 8e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F C C K + ++ L +YHKT HCK S+ Y+S+ +YCK HF
Sbjct: 3 FPSARETCIACLKTVYPLERLVALQHVYHKTCFRCLHCKMTLSLGNYASLQGNIYCKPHF 62
Query: 255 XQLFKXTGSFSKNF 296
QLFK G++ + F
Sbjct: 63 SQLFKAKGNYDEGF 76
>ref|NP_001031545.1| zinc ion binding [Arabidopsis thaliana]
Length = 195
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 213 YSSMDXXLYCKTHFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQD 380
YSSMD LYCK HF QLFK +G++SKNF LTR PSK S QD
Sbjct: 18 YSSMDGVLYCKPHFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQD 73
Score = 56.2 bits (134), Expect = 3e-07
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 54 RXPGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD 227
R P +S F+G KC C K + ++ +T YHKT H + Y+S++
Sbjct: 59 RTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLN 118
Query: 228 XXLYCKTHFXQLFKXTGSFS 287
LYCK HF QLF GS++
Sbjct: 119 GVLYCKVHFNQLFLEKGSYN 138
>gb|AAZ95169.1| putative transcription factor LIM [Brassica rapa]
Length = 113
Score = 59.3 bits (142), Expect = 3e-08
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +3
Query: 126 IDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNF 296
+D LT +YHK HCKG + Y+S + LYC+ HF Q FK TGS K+F
Sbjct: 2 VDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQNFKRTGSLEKSF 58
>emb|CAG04962.1| unnamed protein product [Tetraodon nigroviridis]
Length = 88
Score = 58.5 bits (140), Expect = 5e-08
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++LL +HK+ HCKG S+ Y+S+ +YCK H+ QLFK
Sbjct: 9 CRACRKRVYPMELLIADKQSFHKSCFRCEHCKGKLSLGNYASLHGRMYCKPHYKQLFKSK 68
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 69 GNYDEGF 75
>gb|AAK49580.1| transcription factor L2 [Arabidopsis thaliana]
Length = 148
Score = 56.6 bits (135), Expect = 2e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F+G KC C K + I+ +T YHK+ H S Y++++ LYCK HF
Sbjct: 50 FSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHF 109
Query: 255 XQLFKXTGSFS 287
QLFK GS++
Sbjct: 110 AQLFKEKGSYN 120
Score = 47.0 bits (110), Expect = 2e-04
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 222 MDXXLYCKTHFXQLFKXTGSFSKNF-TPXXXXSXXX-XLTRXPSKXXXXXSXXQD 380
M+ LYCK HF QLFK +GSF+KNF +P LTR PS+ S Q+
Sbjct: 1 MEGVLYCKPHFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQE 55
>emb|CAF90059.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 56.2 bits (134), Expect = 3e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L IYH + HC S+ Y+S+ +YCK HF QLFK
Sbjct: 9 CVSCQKTVYPLEKLVANQHIYHSSCFRCSHCNTKLSLVNYASLHNNVYCKPHFCQLFKAK 68
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 69 GNYDEGF 75
>ref|XP_688621.1| PREDICTED: similar to epithelial protein lost in neoplasm [Danio
rerio]
Length = 114
Score = 54.7 bits (130), Expect = 8e-07
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
+ SF C C+K + ++ L I+H HC S+ Y+++ YCK
Sbjct: 17 SFSFKTQKETCASCEKTVYPMERLVANNLIFHAACFCCKHCNTKLSLGSYAALQGEFYCK 76
Query: 246 THFXQLFKXTGSFSKNF 296
HF QLFK G++ + F
Sbjct: 77 PHFQQLFKSKGNYDEGF 93
>emb|CAG32763.1| hypothetical protein [Gallus gallus]
ref|NP_001006330.1| hypothetical protein LOC419955 [Gallus gallus]
Length = 147
Score = 54.7 bits (130), Expect = 8e-07
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
CT C K + ++ L ++H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CTACQKTVYPMERLVADKFVFHNSCFCCKHCHAKLSLGSYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>dbj|BAC05086.1| unnamed protein product [Homo sapiens]
Length = 519
Score = 54.3 bits (129), Expect = 1e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L +HK+ HC S+ Y+S+ +YCK HF QLFK
Sbjct: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 462 GNYDEGF 468
>ref|NP_001019789.1| cardiomyopathy associated 3 [Mus musculus]
gb|AAY44537.1| XIN2 [Mus musculus]
Length = 3784
Score = 53.9 bits (128), Expect = 1e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L +HK+ HC S+ Y+S+ +YCK HF QLFK
Sbjct: 3257 CIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSK 3316
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 3317 GNYDEGF 3323
>gb|AAH73329.1| MGC80738 protein [Xenopus laevis]
Length = 129
Score = 53.9 bits (128), Expect = 1e-06
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C+ C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CSSCQKTVYPMERLVADKHIFHNSCFCCKHCSAKLSLGTYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>gb|AAH74410.1| MGC84409 protein [Xenopus laevis]
Length = 129
Score = 53.9 bits (128), Expect = 1e-06
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C+ C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CSSCQKTVYPMERLVADKLIFHNSCFCCKHCSAKLSLGTYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>gb|AAH88558.1| Hypothetical protein LOC496845 [Xenopus tropicalis]
ref|NP_001011377.1| hypothetical protein LOC496845 [Xenopus tropicalis]
Length = 129
Score = 53.9 bits (128), Expect = 1e-06
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C+ C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CSSCQKTVYPMERLVADKHIFHNSCFCCKHCSAKLSLGTYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>dbj|BAC41743.1| hypothetical protein [Macaca fascicularis]
Length = 951
Score = 53.9 bits (128), Expect = 1e-06
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L +HK HC S+ Y+S+ +YCK HF QLFK
Sbjct: 415 CILCQKTVYPMECLVADKQNFHKACFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 474
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 475 GNYDEGF 481
>gb|AAH98855.1| Hypothetical protein LOC360646 [Rattus norvegicus]
ref|NP_001020886.1| hypothetical protein LOC360646 [Rattus norvegicus]
Length = 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y++M YCK HF QLFK
Sbjct: 41 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>ref|XP_688205.1| PREDICTED: similar to Epithelial protein lost in neoplasm [Danio
rerio]
Length = 741
Score = 53.5 bits (127), Expect = 2e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L +HKT HC S+ Y+S+ +YCK H+ QLFK
Sbjct: 200 CQVCRKRVYPMESLIADKQNFHKTCFRCAHCNSQLSLGTYASLHGRMYCKPHYKQLFKSK 259
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 260 GNYDEGF 266
>gb|AAH47797.1| Epithelial protein lost in neoplasm [Danio rerio]
Length = 629
Score = 52.8 bits (125), Expect = 3e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L IYH T +C S+ Y+S+ +YCK H+ QLFK
Sbjct: 286 CVTCLKTVYPLEKLVANQQIYHNTCFRCAYCNTKLSLVNYASLHNNVYCKPHYCQLFKAK 345
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 346 GNYDEGF 352
>ref|NP_571739.1| epithelial protein lost in neoplasm [Danio rerio]
gb|AAG31149.1| cytoskeleton-associated LIM domain protein [Danio rerio]
Length = 629
Score = 52.8 bits (125), Expect = 3e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L IYH T +C S+ Y+S+ +YCK H+ QLFK
Sbjct: 286 CVTCLKTVYPLEKLVANQQIYHNTCFRCAYCNTKLSLVNYASLHNNVYCKPHYCQLFKAK 345
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 346 GNYDEGF 352
>gb|AAH84208.1| LOC495252 protein [Xenopus laevis]
Length = 708
Score = 52.8 bits (125), Expect = 3e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L +YH + HC S+ ++S+ YCK HF QLFK
Sbjct: 349 CFSCQKTVYPMERLFANNQVYHNSCFRCSHCSTKLSLGTFASLHGTAYCKPHFNQLFKSK 408
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 409 GNYDEGF 415
>emb|CAG07233.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 52.8 bits (125), Expect = 3e-06
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 66 TMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
+ SF C C K + ++ L ++H T HC S+ ++++ YCK
Sbjct: 2 SFSFKMEKETCKSCKKTVYPMEKLVANNLVFHSTCFCCKHCNTKLSLGSFAALHGEFYCK 61
Query: 246 THFXQLFKXTGSFSKNF 296
HF QLFK G++ + F
Sbjct: 62 PHFQQLFKSKGNYDEGF 78
>ref|XP_635661.1| hypothetical protein DDB0188965 [Dictyostelium discoideum]
gb|EAL62148.1| hypothetical protein DDB0188965 [Dictyostelium discoideum]
Length = 472
Score = 52.8 bits (125), Expect = 3e-06
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 60 PGTMS--FTGXXXKCTXCDKXXHFIDLLTXXXX----IYHKTXXXXXHCKGXXSMXXYSS 221
P T+S F+G KC C+K + + + + HK HC ++ Y+S
Sbjct: 117 PTTISSKFSGSTEKCNLCNKTVYLTEKIVVEDKEDKKVLHKQCLKCTHCSVVLNLGTYAS 176
Query: 222 MDXXLYCKTHFXQLFKXTGSFSKNF 296
M YCK HF QLF G++ ++F
Sbjct: 177 MKGVFYCKPHFKQLFATKGNYDESF 201
Score = 52.0 bits (123), Expect = 5e-06
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXX----IYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
G KCT C K + + + +HK HCK S+ Y+S++ YCK
Sbjct: 6 GTQEKCTACAKTVYLTEKIVVEDKEDKKTFHKLCLKCTHCKLTLSLGNYASLNGVFYCKP 65
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLF G++ + F
Sbjct: 66 HFKQLFATKGNYDEGF 81
Score = 40.0 bits (92), Expect = 0.019
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 TGXXXKCTXCDKXXHFIDLLTXXXX----IYHKTXXXXXHCKGXXSMXXYSSMDXXLYCK 245
TG KC C K + + + I+HK C ++ +D +YCK
Sbjct: 248 TGSSEKCHDCQKSVYLTEKVVLEELENKRIFHKACLKCSKCSVILTLGTLVQLDGVIYCK 307
Query: 246 THFXQLFKXTGSFSKNF 296
HF +L+ G+ F
Sbjct: 308 PHFKELYATQGNLDGGF 324
>dbj|BAC03855.1| unnamed protein product [Homo sapiens]
gb|AAH51812.1| LIMD2 protein [Homo sapiens]
gb|AAH04400.1| Hypothetical protein LOC80774 [Homo sapiens]
ref|NP_085053.1| hypothetical protein LOC80774 [Homo sapiens]
Length = 127
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 40 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 99
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 100 GNYDEGF 106
>gb|AAK67634.1| hypothetical protein SB143 [Homo sapiens]
Length = 127
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 40 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 99
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 100 GNYDEGF 106
>ref|XP_887351.1| PREDICTED: similar to Epithelial protein lost in neoplasm isoform 2
[Bos taurus]
Length = 602
Score = 52.4 bits (124), Expect = 4e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 232 CVECQKTVYSMERLLANQQVFHISCFRCSYCNSKLSLGTYASLHGRIYCKPHFNQLFKSK 291
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 292 GNYDEGF 298
>ref|XP_612416.2| PREDICTED: similar to Epithelial protein lost in neoplasm isoform 1
[Bos taurus]
Length = 599
Score = 52.4 bits (124), Expect = 4e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 229 CVECQKTVYSMERLLANQQVFHISCFRCSYCNSKLSLGTYASLHGRIYCKPHFNQLFKSK 288
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 289 GNYDEGF 295
>gb|AAH68130.1| Hypothetical protein LOC67803 [Mus musculus]
ref|NP_765985.1| hypothetical protein LOC67803 [Mus musculus]
dbj|BAE41396.1| unnamed protein product [Mus musculus]
dbj|BAE39448.1| unnamed protein product [Mus musculus]
dbj|BAE42667.1| unnamed protein product [Mus musculus]
dbj|BAC27866.1| unnamed protein product [Mus musculus]
dbj|BAC33928.1| unnamed protein product [Mus musculus]
dbj|BAC25371.1| unnamed protein product [Mus musculus]
Length = 128
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y++M YC+ HF QLFK
Sbjct: 41 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>ref|XP_886169.1| PREDICTED: similar to epithelial protein lost in neoplasm isoform 3
[Bos taurus]
ref|XP_585798.2| PREDICTED: similar to epithelial protein lost in neoplasm isoform 1
[Bos taurus]
Length = 128
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>ref|XP_853364.1| PREDICTED: similar to epithelial protein lost in neoplasm [Canis
familiaris]
Length = 128
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y+++ YCK HF QLFK
Sbjct: 41 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>ref|XP_911481.1| PREDICTED: similar to epithelial protein lost in neoplasm [Mus
musculus]
Length = 128
Score = 52.4 bits (124), Expect = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L I+H + HC S+ Y++M YC+ HF QLFK
Sbjct: 41 CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSK 100
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 101 GNYDEGF 107
>ref|XP_887364.1| PREDICTED: similar to Epithelial protein lost in neoplasm isoform 3
[Bos taurus]
Length = 382
Score = 52.4 bits (124), Expect = 4e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 12 CVECQKTVYSMERLLANQQVFHISCFRCSYCNSKLSLGTYASLHGRIYCKPHFNQLFKSK 71
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 72 GNYDEGF 78
>gb|AAH01247.2| LIMA1 protein [Homo sapiens]
Length = 660
Score = 52.0 bits (123), Expect = 5e-06
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 60 PGTMSFTGXXXK-CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXL 236
P M F + C C K + ++ L ++H + +C S+ Y+S+ +
Sbjct: 278 PKAMKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRI 337
Query: 237 YCKTHFXQLFKXTGSFSKNF 296
YCK HF QLFK G++ + F
Sbjct: 338 YCKPHFNQLFKSKGNYDEGF 357
>dbj|BAC39353.1| unnamed protein product [Mus musculus]
Length = 593
Score = 52.0 bits (123), Expect = 5e-06
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 228 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 287
Query: 276 GSFSKNF 296
G++ ++F
Sbjct: 288 GNYDESF 294
>gb|AAG17267.1| unknown [Homo sapiens]
Length = 301
Score = 52.0 bits (123), Expect = 5e-06
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 12 CVECQKTVYXMERLLANQQVFHISCLRCXYCXNKLSLGTYASLHGRIYCKPHFNQLFKSK 71
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 72 GNYDEGF 78
>dbj|BAA90914.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 52.0 bits (123), Expect = 5e-06
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 60 PGTMSFTGXXXK-CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXL 236
P M F + C C K + ++ L ++H + +C S+ Y+S+ +
Sbjct: 74 PKAMKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRI 133
Query: 237 YCKTHFXQLFKXTGSFSKNF 296
YCK HF QLFK G++ + F
Sbjct: 134 YCKPHFNQLFKSKGNYDEGF 153
>dbj|BAB14625.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 88 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 147
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 148 GNYDEGF 154
>gb|AAF23756.1| epithelial protein lost in neoplasm alpha [Homo sapiens]
Length = 600
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 291 GNYDEGF 297
>gb|AAF67491.1| sterol regulatory element binding protein 3 [Homo sapiens]
Length = 457
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 88 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 147
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 148 GNYDEGF 154
>dbj|BAA91092.1| unnamed protein product [Homo sapiens]
Length = 599
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 230 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 289
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 290 GNYDEGF 296
>dbj|BAE21099.1| unnamed protein product [Mus musculus]
dbj|BAE39345.1| unnamed protein product [Mus musculus]
dbj|BAC27520.1| unnamed protein product [Mus musculus]
Length = 593
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 228 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 287
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 288 GNYDEGF 294
>dbj|BAC25798.1| unnamed protein product [Mus musculus]
Length = 593
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 228 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 287
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 288 GNYDEGF 294
>dbj|BAD92749.1| epithelial protein lost in neoplasm beta variant [Homo sapiens]
Length = 769
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 400 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 459
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 460 GNYDEGF 466
>gb|AAG31147.1| epithelial protein lost in neoplasm-a [Mus musculus]
ref|NP_075550.1| epithelial protein lost in neoplasm [Mus musculus]
Length = 593
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 228 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 287
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 288 GNYDEGF 294
>dbj|BAD96691.1| epithelial protein lost in neoplasm beta variant [Homo sapiens]
Length = 759
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 450 GNYDEGF 456
>gb|AAI10816.1| Epithelial protein lost in neoplasm beta [Homo sapiens]
emb|CAB66845.1| hypothetical protein [Homo sapiens]
ref|NP_057441.1| epithelial protein lost in neoplasm beta [Homo sapiens]
gb|AAF23755.1| epithelial protein lost in neoplasm beta [Homo sapiens]
sp|Q9UHB6|EPLIN_HUMAN Epithelial protein lost in neoplasm
Length = 759
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 450 GNYDEGF 456
>ref|XP_509057.1| PREDICTED: epithelial protein lost in neoplasm beta [Pan
troglodytes]
Length = 759
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 450 GNYDEGF 456
>gb|AAH31490.1| D15Ertd366e protein [Mus musculus]
Length = 753
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 388 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 447
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 448 GNYDEGF 454
>dbj|BAC33699.1| unnamed protein product [Mus musculus]
Length = 753
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 388 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 447
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 448 GNYDEGF 454
>gb|AAG31148.1| epithelial protein lost in neoplasm-b [Mus musculus]
Length = 753
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 388 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 447
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 448 GNYDEGF 454
>sp|Q9ERG0|EPLIN_MOUSE Epithelial protein lost in neoplasm (mEPLIN)
Length = 753
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 388 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 447
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 448 GNYDEGF 454
>dbj|BAA91120.1| unnamed protein product [Homo sapiens]
Length = 704
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 450 GNYDEGF 456
>gb|AAA85718.1| mutant sterol regulatory element binding protein-2
Length = 839
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 470 CVGCQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGQIYCKPHFNQLFKSK 529
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 530 GNYDEGF 536
>ref|XP_217039.3| PREDICTED: similar to Epithelial protein lost in neoplasm (mEPLIN)
[Rattus norvegicus]
Length = 970
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 603 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 662
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 663 GNYDEGF 669
>ref|XP_534804.2| PREDICTED: similar to Epithelial protein lost in neoplasm [Canis
familiaris]
Length = 761
Score = 51.2 bits (121), Expect = 8e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 390 CVECQKTVYPMERLFANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKAK 449
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 450 GNYDEGF 456
>ref|XP_424485.1| PREDICTED: similar to epithelial protein lost in neoplasm alpha
[Gallus gallus]
Length = 610
Score = 51.2 bits (121), Expect = 8e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ L ++H + +C S+ Y+S+ +YCK HF QLFK
Sbjct: 239 CVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAK 298
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 299 GNYDEGF 305
>ref|XP_629012.1| hypothetical protein DDB0192012 [Dictyostelium discoideum]
gb|EAL60596.1| hypothetical protein DDB0192012 [Dictyostelium discoideum]
Length = 110
Score = 50.4 bits (119), Expect = 1e-05
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD-XXLYCK 245
MS G KC C K + ++ L IYHK+ C S+ Y+S D L+CK
Sbjct: 1 MSKFGSTEKCIVCTKTVYPLEKLAADEKIYHKSCFKCTECNSILSLGKYASKDNGTLFCK 60
Query: 246 THFXQLFKXTGSFSKNF 296
F +LF G++S+ F
Sbjct: 61 VCFKKLFFSKGNYSEGF 77
>ref|XP_629013.1| hypothetical protein DDB0219875 [Dictyostelium discoideum]
gb|EAL60666.1| hypothetical protein DDB0219875 [Dictyostelium discoideum]
Length = 111
Score = 48.9 bits (115), Expect = 4e-05
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMD-XXLYCKTHFX 257
G KC C K + ++ L IYHK+ C S+ Y+S D L+CK F
Sbjct: 6 GSTEKCIVCTKTVYPLEKLAADEKIYHKSCFKCTECNSILSLGKYASKDNGTLFCKVCFK 65
Query: 258 QLFKXTGSFSKNF 296
+LF G++S+ F
Sbjct: 66 KLFFSKGNYSEGF 78
>gb|AAH96905.1| LOC559746 protein [Danio rerio]
Length = 263
Score = 48.5 bits (114), Expect = 5e-05
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 156 YHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNF 296
+HKT HC S+ Y+S+ +YCK H+ QLFK G++ + F
Sbjct: 11 FHKTCFRCAHCNSQLSLGTYASLHGRMYCKPHYKQLFKSKGNYDEGF 57
>ref|XP_684609.1| PREDICTED: similar to MGC84409 protein [Danio rerio]
Length = 386
Score = 47.4 bits (111), Expect = 1e-04
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C+ C K + ++ + I+HK+ HCK S+ Y+ + YC H+ QLFK
Sbjct: 302 CSACLKPVYPMERMAADKLIFHKSCFCCKHCKKKLSLQGYAPLYGEFYCVFHYQQLFKRK 361
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 362 GNYDEGF 368
>emb|CAG12362.1| unnamed protein product [Tetraodon nigroviridis]
Length = 83
Score = 47.4 bits (111), Expect = 1e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
CT C + + +D L YHK+ HC+ S+ Y S+ YC H+ QL +
Sbjct: 12 CTVCRRRAYPMDALIVDKKKYHKSCFCCEHCRNKLSLGNYVSLHGRFYCLPHYKQLLQSK 71
Query: 276 GSF 284
GSF
Sbjct: 72 GSF 74
>ref|XP_794558.1| PREDICTED: similar to epithelial protein lost in neoplasm
[Strongylocentrotus purpuratus]
Length = 116
Score = 46.6 bits (109), Expect = 2e-04
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ +T IYH + CK + Y++ ++CK HF Q+FK
Sbjct: 21 CHVCQKRVYPMEKITADNIIYHNSCFKCSECKKTLRLGTYAACQGTVFCKPHFKQMFKLK 80
Query: 276 GSF 284
G++
Sbjct: 81 GNY 83
>gb|AAX26577.2| SJCHGC02485 protein [Schistosoma japonicum]
Length = 454
Score = 45.4 bits (106), Expect = 5e-04
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 93 KCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKX 272
+C C + + ++ L +YHKT C+ S+ YS + YC+ H+ LFK
Sbjct: 357 RCYACGEVVYPLEALQTIGRVYHKTCFKCHQCQRVLSLGKYSVWEGNPYCEPHYLVLFKA 416
Query: 273 TGSFSKN 293
G ++ N
Sbjct: 417 FGQYNSN 423
>ref|XP_886154.1| PREDICTED: similar to epithelial protein lost in neoplasm isoform 2
[Bos taurus]
gb|AAX46655.1| hypothetical protein MGC10986 [Bos taurus]
Length = 78
Score = 44.7 bits (104), Expect = 8e-04
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 126 IDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNF 296
++ L I+H + HC S+ Y+++ YCK HF QLFK G++ + F
Sbjct: 1 MERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGF 57
>ref|XP_642140.1| hypothetical protein DDB0214931 [Dictyostelium discoideum]
gb|AAK30152.1| LimC [Dictyostelium discoideum]
gb|EAL68113.1| hypothetical protein DDB0214931 [Dictyostelium discoideum]
Length = 182
Score = 40.0 bits (92), Expect = 0.019
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + + + YHK HC + YS D YCKT + +LF+
Sbjct: 5 CPTCTKRVYAAEAVKACEKQYHKLCLQCFHCHKILQLGQYSERDGQPYCKTDYDRLFRQA 64
Query: 276 G 278
G
Sbjct: 65 G 65
>ref|XP_650090.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL44703.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
Length = 162
Score = 40.0 bits (92), Expect = 0.019
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ + HK CK + ++ YCK HF Q+FK
Sbjct: 4 CPVCGKKAYQMESIVIEGITMHKNCFRCSVCKKTLNGSNFAKNHGIYYCKVHFQQMFKEK 63
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 64 GNYDEGF 70
>gb|AAW25420.1| SJCHGC06351 protein [Schistosoma japonicum]
Length = 149
Score = 38.9 bits (89), Expect = 0.043
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLF 266
C C K + +D ++ +YHK C+ + ++S+D ++CK H+ + F
Sbjct: 65 CFDCGKRIYPVDRISTGERVYHKACFRCATCQRTLLVGNFASLDGVIFCKPHYIEQF 121
>gb|AAX30635.2| SJCHGC06220 protein [Schistosoma japonicum]
Length = 81
Score = 38.9 bits (89), Expect = 0.043
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 93 KCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
KC CDK + + + ++HK C ++ Y+ D LYCK H+ +
Sbjct: 15 KCVRCDKSVYAAERMEAGGNVWHKRCFCCSKCDMLLNLNNYNQSDRILYCKKHYQE 70
>ref|XP_393163.2| PREDICTED: similar to LIM domain protein [Apis mellifera]
Length = 1177
Score = 38.5 bits (88), Expect = 0.056
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFK 269
C C K ++ ++HK C ++ Y S + LYCK HF +LF+
Sbjct: 566 CRSCGKVVFQMEQTKAEGLVWHKNCFRCVQCSKQLNVDNYESHESTLYCKPHFKELFQ 623
>ref|XP_649298.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
ref|XP_649155.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL43911.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL43772.1| LIM domain protein [Entamoeba histolytica HM-1:IMSS]
Length = 179
Score = 38.5 bits (88), Expect = 0.056
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXT 275
C C K + ++ + HK CK + ++ YCK HF Q+F+
Sbjct: 4 CPVCGKKAYQMEAIKIEGITMHKNCFRCSVCKKILNGANFAKNHGVYYCKVHFQQMFREK 63
Query: 276 GSFSKNF 296
G++ + F
Sbjct: 64 GNYDEGF 70
>gb|AAH61131.1| Cysteine and glycine-rich protein 3 [Mus musculus]
emb|CAA90039.1| murine muscle LIM protein [Mus musculus]
ref|NP_038836.1| cysteine and glycine-rich protein 3 [Mus musculus]
dbj|BAB22580.1| unnamed protein product [Mus musculus]
dbj|BAB27741.1| unnamed protein product [Mus musculus]
sp|P50462|CSRP3_MOUSE Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3)
(CRP3) (LIM domain protein, cardiac) (Muscle LIM
protein)
dbj|BAA13721.1| muscle LIM protein [Mus musculus]
Length = 194
Score = 36.2 bits (82), Expect = 0.28
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 RAATDRXPGTMSFT-GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXY 215
RAAT P S G KC C K + + + +HKT C
Sbjct: 100 RAATTSNPSKFSAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNV 159
Query: 216 SSMDXXLYCKTHFXQLFKXTG 278
+ D LYCK + + F TG
Sbjct: 160 TDKDGELYCKVCYAKNFGPTG 180
>ref|XP_479570.1| putative r40c1 protein [Oryza sativa (japonica cultivar-group)]
dbj|BAC83803.1| putative r40c1 protein [Oryza sativa (japonica cultivar-group)]
Length = 402
Score = 35.8 bits (81), Expect = 0.36
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 49 QTGXRAPCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWT 228
Q+ + C P TSA + S+TS+ ST + C PP
Sbjct: 103 QSTRTSRCCGPRARTSAMASAASAWSTTSTSTWTPST--------ATSPTAACTTAPPSC 154
Query: 229 XXCTARPTSXSSSXXPGASPRTSRQ 303
AR T+ + PGA RT R+
Sbjct: 155 SGSGARATTSAGRSSPGAPRRTRRR 179
>emb|CAA57065.1| muscle LIM protein [Rattus norvegicus]
ref|NP_476485.1| cysteine-rich protein 3 [Rattus norvegicus]
sp|P50463|CSRP3_RAT Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3)
(CRP3) (LIM domain protein, cardiac) (Muscle LIM
protein)
Length = 194
Score = 35.8 bits (81), Expect = 0.36
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 RAATDRXPGTMSFT-GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXY 215
RAAT P S G KC C K + + + +HKT C
Sbjct: 100 RAATTSNPSKFSAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFPCAICGKSLESTNV 159
Query: 216 SSMDXXLYCKTHFXQLFKXTG 278
+ D LYCK + + F TG
Sbjct: 160 TDKDGELYCKVCYAKNFGPTG 180
Score = 32.3 bits (72), Expect = 4.0
Identities = 14/66 (21%), Positives = 26/66 (39%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC CDK + + + +HKT C+ ++ + +YCK + +
Sbjct: 5 GGGAKCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 261 LFKXTG 278
+ G
Sbjct: 65 KYGPKG 70
>ref|NP_001019860.1| cysteine- and glycine-rich protein 3 [Bos taurus]
gb|AAI03109.1| Cysteine- and glycine-rich protein 3 [Bos taurus]
gb|AAY45897.1| cysteine- and glycine-rich protein 3 [Bos taurus]
sp|Q4U0T9|CSRP3_BOVIN Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3)
(CRP3)
Length = 194
Score = 35.8 bits (81), Expect = 0.36
Identities = 20/79 (25%), Positives = 28/79 (35%)
Frame = +3
Query: 42 AATDRXPGTMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSS 221
A T P + G KC C K + + + +HKT C +
Sbjct: 102 ATTSSNPSKFAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTD 161
Query: 222 MDXXLYCKTHFXQLFKXTG 278
D LYCK + + F TG
Sbjct: 162 KDGELYCKVCYAKNFGPTG 180
>gb|AAX26574.2| SJCHGC02486 protein [Schistosoma japonicum]
Length = 188
Score = 35.4 bits (80), Expect = 0.47
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 93 KCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
+C C + + ++ L +YHKT C+ S+ YS + YC+ H+
Sbjct: 134 RCYACGEVVYPLEALQTIGRVYHKTCFKCHQCQRVLSLGKYSVWEGNPYCEPHY 187
>gb|AAT85555.1| BS004P [Gekko japonicus]
gb|AAT68236.1| GekBS034P [Gekko japonicus]
Length = 194
Score = 33.9 bits (76), Expect = 1.4
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 RAATDRXPGTMSFT-GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXY 215
R+AT P + G KC C K + + + +HKT C
Sbjct: 100 RSATTSNPSKFTAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNV 159
Query: 216 SSMDXXLYCKTHFXQLFKXTG 278
+ D LYCK + + F TG
Sbjct: 160 TDKDGELYCKVCYAKNFGPTG 180
Score = 32.3 bits (72), Expect = 4.0
Identities = 14/66 (21%), Positives = 26/66 (39%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC CDK + + + +HKT C+ ++ + +YCK + +
Sbjct: 5 GGGAKCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64
Query: 261 LFKXTG 278
+ G
Sbjct: 65 RYGPKG 70
>ref|XP_852328.1| PREDICTED: similar to Cysteine and glycine-rich protein 3
(Cysteine-rich protein 3) (CRP3) (LIM domain protein,
cardiac) (Muscle LIM protein) isoform 1 [Canis
familiaris]
Length = 194
Score = 33.9 bits (76), Expect = 1.4
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 RAATDRXPGTMSFT-GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXY 215
R+AT P + G KC C K + + + +HKT C
Sbjct: 100 RSATTSNPSKFTAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNV 159
Query: 216 SSMDXXLYCKTHFXQLFKXTG 278
+ D LYCK + + F TG
Sbjct: 160 TDKDGELYCKVCYAKNFGPTG 180
>ref|XP_865543.1| PREDICTED: similar to Cysteine and glycine-rich protein 3
(Cysteine-rich protein 3) (CRP3) (LIM domain protein,
cardiac) (Muscle LIM protein) isoform 5 [Canis
familiaris]
Length = 195
Score = 33.9 bits (76), Expect = 1.4
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 RAATDRXPGTMSFT-GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXY 215
R+AT P + G KC C K + + + +HKT C
Sbjct: 101 RSATTSNPSKFTAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNV 160
Query: 216 SSMDXXLYCKTHFXQLFKXTG 278
+ D LYCK + + F TG
Sbjct: 161 TDKDGELYCKVCYAKNFGPTG 181
>ref|XP_644531.1| hypothetical protein DDB0217328 [Dictyostelium discoideum]
ref|XP_644719.1| hypothetical protein DDB0203031 [Dictyostelium discoideum]
gb|AAO51397.1| similar to Delayed Anaerobic Gene; Dan4p [Saccharomyces cerevisiae]
[Dictyostelium discoideum]
gb|EAL70856.1| hypothetical protein DDB0203031 [Dictyostelium discoideum]
gb|EAL70605.1| hypothetical protein DDB0217328 [Dictyostelium discoideum]
Length = 457
Score = 33.5 bits (75), Expect = 1.8
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +1
Query: 31 RAFVQPQTGX-----RAPCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKG 195
+ + P TG + C S +S+ + TSST+S ST T
Sbjct: 286 KTYRYPDTGYLQLTKASTCASWVASSSSSTTSTTSTSSTTSKPTTTSTTSTTSTTSTTST 345
Query: 196 XSRCXATPPW-TXXCTARPTSXSSSXXPGASPRTSR 300
S+ T T T++PT+ S++ + TS+
Sbjct: 346 TSKPTTTSTTSTTSTTSKPTTTSTTSTTSTTSTTSK 381
>ref|XP_504984.1| YlTSR1 [Yarrowia lipolytica]
emb|CAG77791.1| YlTSR1 [Yarrowia lipolytica CLIB122]
Length = 461
Score = 33.5 bits (75), Expect = 1.8
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 76 SPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTARPTS 255
S + TS+ ++ TS+T S ST ++ S ++ T T+ TS
Sbjct: 137 STSSSTSSTSSSTSSTSTTESTSSTSSTSSTNSTSTSSTTSSSTTSSSSSTTSTTSSTTS 196
Query: 256 XSSSXXPGASPRTS 297
SSS +SP S
Sbjct: 197 SSSSTTSTSSPSIS 210
>gb|EAL31557.1| GA18482-PA [Drosophila pseudoobscura]
Length = 1709
Score = 33.1 bits (74), Expect = 2.4
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 73 LSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXT-AKGXSRCXATPPWTXXCTARP 249
+S A TS+ AT SS+++ S T A S A+P T CT P
Sbjct: 1161 ISTATSTSSNTATNQVASSSNNSSSAGSISYSKSLNATPASSTSDVDASPELTPTCTTAP 1220
Query: 250 TSXSSSXXP 276
+S SS P
Sbjct: 1221 SSSLSSSQP 1229
>ref|XP_390611.1| hypothetical protein FG10435.1 [Gibberella zeae PH-1]
gb|EAA68209.1| hypothetical protein FG10435.1 [Gibberella zeae PH-1]
Length = 1763
Score = 33.1 bits (74), Expect = 2.4
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +1
Query: 76 SPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTARPTS 255
S + S +T TSSTSS ST T+ + +T + T+ T+
Sbjct: 1171 SSSTSLSTSTSTSTSTSSTSSSISTSSTSSSTSTTSTSTSSTTTSSTTTSSSTKTSSTTT 1230
Query: 256 XSSSXXPGASPRTS 297
S+S S TS
Sbjct: 1231 SSTSSSSSTSTSTS 1244
>gb|AAH83395.1| Zgc:103468 [Danio rerio]
ref|NP_001006026.1| hypothetical protein LOC450005 [Danio rerio]
Length = 193
Score = 33.1 bits (74), Expect = 2.4
Identities = 14/66 (21%), Positives = 27/66 (40%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C+K + + + +HKT C+ ++ + +YCKT + +
Sbjct: 5 GGGAKCAACEKTVYHAEEIQCNSRSFHKTCFICMVCRKGLDSTTVAAHESEIYCKTCYGK 64
Query: 261 LFKXTG 278
+ G
Sbjct: 65 KYGPKG 70
Score = 31.2 bits (69), Expect = 8.9
Identities = 16/71 (22%), Positives = 25/71 (35%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G +C C K + + + +HKT C + D LYCK + +
Sbjct: 115 GSTDRCPRCSKAVYAAEKIMGAGKPWHKTCFRCLLCGKSLESTTVTDKDGELYCKVCYAK 174
Query: 261 LFKXTGSFSKN 293
F G +N
Sbjct: 175 NFGPKGRGLRN 185
>gb|AAP78680.1| MBCTL1 [Monosiga brevicollis]
Length = 916
Score = 33.1 bits (74), Expect = 2.4
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = +1
Query: 76 SPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTARPTS 255
S TS T TSSTSS ST T+ S + + T+ +S
Sbjct: 224 STTSTTSTTTTTITSTSSTSSTSSSSSTSSTSSTSSTSSTTSTSSTSSTTSTSSTSSTSS 283
Query: 256 XSSSXXPGASPRTS 297
SS+ ++ TS
Sbjct: 284 TSSTSSTSSTSSTS 297
Score = 31.2 bits (69), Expect = 8.9
Identities = 19/74 (25%), Positives = 27/74 (36%)
Frame = +1
Query: 76 SPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTARPTS 255
S T+ + TSSTSS ST T S T + T+ +S
Sbjct: 227 STTSTTTTTITSTSSTSSTSSSSSTSSTSSTSSTSSTTSTSSTSSTTSTSSTSSTSSTSS 286
Query: 256 XSSSXXPGASPRTS 297
SS+ ++ TS
Sbjct: 287 TSSTSSTSSTSSTS 300
>ref|XP_760515.1| hypothetical protein UM04368.1 [Ustilago maydis 521]
gb|EAK85643.1| hypothetical protein UM04368.1 [Ustilago maydis 521]
Length = 716
Score = 32.7 bits (73), Expect = 3.1
Identities = 22/83 (26%), Positives = 31/83 (37%)
Frame = +1
Query: 43 QPQTGXRAPCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPP 222
+P T S A TS T TSS+S+ ++ T+ S
Sbjct: 254 KPSTSSTTSRSSTASTTSRSSTTSYSTSSSSTNRALTTSSSRSSTSTTSSSTSTST---- 309
Query: 223 WTXXCTARPTSXSSSXXPGASPR 291
T T+ TS SSS P +P+
Sbjct: 310 -TSSTTSSSTSTSSSVTPTPTPK 331
>ref|XP_641675.1| hypothetical protein DDB0214939 [Dictyostelium discoideum]
gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum]
gb|EAL67646.1| LIM domain protein [Dictyostelium discoideum]
Length = 199
Score = 32.7 bits (73), Expect = 3.1
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +3
Query: 93 KCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTH 251
KC C K + ++ + YHK C ++ + S + LYC H
Sbjct: 6 KCGACAKTAYPLESVVANNNSYHKGCFKCSTCNSTLNVKTFKSFEGKLYCPVH 58
>ref|XP_420911.1| PREDICTED: similar to murine muscle LIM protein [Gallus gallus]
Length = 194
Score = 32.7 bits (73), Expect = 3.1
Identities = 14/66 (21%), Positives = 27/66 (40%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C+K + + + +HKT C+ ++ + +YCKT + +
Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFLCMACRKALDSTTVAAHESEIYCKTCYGR 64
Query: 261 LFKXTG 278
+ G
Sbjct: 65 KYGPKG 70
>ref|XP_582016.2| PREDICTED: similar to Protein MICAL-3 [Bos taurus]
Length = 983
Score = 32.7 bits (73), Expect = 3.1
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGX--XSMXXYSSMDXXLYCKTHF 254
G C C K + ++ L+ +H++ HC S Y+ D YCK H+
Sbjct: 787 GGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEHCATTLRLSAYAYALEDGKFYCKPHY 846
>emb|CAF99976.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 32.3 bits (72), Expect = 4.0
Identities = 13/66 (19%), Positives = 27/66 (40%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C+K + + + +HKT C+ ++ + +YCK+ + +
Sbjct: 5 GGGAKCAACEKTVYHAEEIQCNSRSFHKTCFICMSCRKGLDSTTVAAHESEIYCKSCYGK 64
Query: 261 LFKXTG 278
+ G
Sbjct: 65 KYGPKG 70
Score = 32.0 bits (71), Expect = 5.2
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +3
Query: 63 GTMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYC 242
G S G +C C K + + + +HKT C + D LYC
Sbjct: 109 GKFSKFGSSDRCPRCSKAVYAAEKVMGAGKPWHKTCFRCAICGKSLESTTVTDKDGELYC 168
Query: 243 KTHFXQLFKXTG 278
K + + F G
Sbjct: 169 KVCYAKNFGPKG 180
>ref|XP_865526.1| PREDICTED: similar to Cysteine and glycine-rich protein 3
(Cysteine-rich protein 3) (CRP3) (LIM domain protein,
cardiac) (Muscle LIM protein) isoform 4 [Canis
familiaris]
Length = 193
Score = 32.3 bits (72), Expect = 4.0
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C K + + + +HKT C + D LYCK + +
Sbjct: 114 GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK 173
Query: 261 LFKXTG 278
F TG
Sbjct: 174 NFGPTG 179
>ref|NP_003467.1| cysteine and glycine-rich protein 3 [Homo sapiens]
gb|AAH05900.1| Cysteine and glycine-rich protein 3 [Homo sapiens]
gb|AAH24010.1| Cysteine and glycine-rich protein 3 [Homo sapiens]
gb|AAD00189.1| LIM protein MLP [Homo sapiens]
gb|AAD00183.1| LIM protein MLP [Homo sapiens]
sp|P50461|CSRP3_HUMAN Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3)
(CRP3) (LIM domain protein, cardiac) (Muscle LIM
protein)
gb|AAH57221.1| CSRP3 protein [Homo sapiens]
gb|AAA92571.1| LIM protein MLP
gb|AAA91104.1| LIM domain protein
Length = 194
Score = 32.3 bits (72), Expect = 4.0
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C K + + + +HKT C + D LYCK + +
Sbjct: 115 GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK 174
Query: 261 LFKXTG 278
F TG
Sbjct: 175 NFGPTG 180
>gb|AAF28868.1| myogenic factor LIM3 [Homo sapiens]
Length = 194
Score = 32.3 bits (72), Expect = 4.0
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQ 260
G KC C K + + + +HKT C + D LYCK + +
Sbjct: 115 GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK 174
Query: 261 LFKXTG 278
F TG
Sbjct: 175 NFGPTG 180
>gb|EAM74978.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function
DUF224:FAD linked oxidase, C-terminal:FAD linked
oxidase, N-terminal [Kineococcus radiotolerans SRS30216]
ref|ZP_00617246.1| 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function
DUF224:FAD linked oxidase, C-terminal:FAD linked
oxidase, N-terminal [Kineococcus radiotolerans SRS30216]
Length = 1622
Score = 32.3 bits (72), Expect = 4.0
Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Frame = +1
Query: 46 PQTGXRAPCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXX---XXTAKGXSRCXAT 216
P T A C +P TS A + R TA C
Sbjct: 22 PATPSPATCAAPPPPTSCTTAAASSPTPAPGRRSGSGRCRRACPRCPSTTASCRWSCTPA 81
Query: 217 PPWTXXCTARPTSXSSSXXPGASPRTS 297
PP + +RP S S+S P + P S
Sbjct: 82 PPTSSTSPSRPPSPSASRTPSSPPPAS 108
>gb|AAN71469.1| RE67887p [Drosophila melanogaster]
Length = 543
Score = 32.0 bits (71), Expect = 5.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +3
Query: 96 CTXCDKXXHFID----LLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQL 263
C C K + ++ L I+HKT C Y+ D LYC HF +
Sbjct: 80 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLI 139
Query: 264 FKXTGSFSKNFTP 302
F + + FTP
Sbjct: 140 FAPKVVY-EEFTP 151
>ref|XP_695229.1| PREDICTED: similar to Protein MICAL-3 [Danio rerio]
Length = 1563
Score = 32.0 bits (71), Expect = 5.2
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGX--XSMXXYSSMDXXLYCKTHF 254
G C C + + ++ L+ +H++ HC S Y + YCK HF
Sbjct: 751 GSSDVCYFCGRRVYVMERLSAEGKFFHRSCFQCDHCSSTIRLSNYTYDQLHGKFYCKHHF 810
>gb|AAH76911.1| Cysteine and glycine-rich protein 2 [Xenopus tropicalis]
ref|NP_001006836.1| cysteine and glycine-rich protein 2 [Xenopus tropicalis]
Length = 194
Score = 32.0 bits (71), Expect = 5.2
Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +3
Query: 66 TMSFT---GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXL 236
T FT G KC C K + + + +HKT C + D +
Sbjct: 107 TSKFTQKFGATEKCPRCQKSVYAAERVMGGGQPWHKTCFRCAFCGKSLDSTTVTEKDGEI 166
Query: 237 YCKTHFXQLFKXTG 278
YCK + + F G
Sbjct: 167 YCKVCYAKSFGPKG 180
Score = 31.2 bits (69), Expect = 8.9
Identities = 14/70 (20%), Positives = 27/70 (38%)
Frame = +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M G KC CDK + + + +HK C+ ++ + +YCK+
Sbjct: 1 MPILGGGAKCGACDKTVYHAEEIQCNGRSFHKPCFICMVCRKALDSTTVAAHESEIYCKS 60
Query: 249 HFXQLFKXTG 278
+ + + G
Sbjct: 61 CYGRKYGPKG 70
>ref|NP_001014704.1| CG33521-PB, isoform B [Drosophila melanogaster]
ref|NP_001014703.1| CG33521-PA, isoform A [Drosophila melanogaster]
gb|AAX53602.1| CG33521-PB, isoform B [Drosophila melanogaster]
gb|AAX53601.1| CG33521-PA, isoform A [Drosophila melanogaster]
Length = 663
Score = 32.0 bits (71), Expect = 5.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +3
Query: 96 CTXCDKXXHFID----LLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQL 263
C C K + ++ L I+HKT C Y+ D LYC HF +
Sbjct: 80 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLI 139
Query: 264 FKXTGSFSKNFTP 302
F + + FTP
Sbjct: 140 FAPKVVY-EEFTP 151
>gb|AAM50001.1| RE73965p [Drosophila melanogaster]
Length = 495
Score = 32.0 bits (71), Expect = 5.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +3
Query: 96 CTXCDKXXHFID----LLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQL 263
C C K + ++ L I+HKT C Y+ D LYC HF +
Sbjct: 42 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLI 101
Query: 264 FKXTGSFSKNFTP 302
F + + FTP
Sbjct: 102 FAPKVVY-EEFTP 113
>ref|NP_001014705.1| CG33521-PC, isoform C [Drosophila melanogaster]
ref|NP_001014702.1| CG33521-PD, isoform D [Drosophila melanogaster]
gb|AAX53604.1| CG33521-PD, isoform D [Drosophila melanogaster]
gb|AAX53603.1| CG33521-PC, isoform C [Drosophila melanogaster]
Length = 649
Score = 32.0 bits (71), Expect = 5.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +3
Query: 96 CTXCDKXXHFID----LLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQL 263
C C K + ++ L I+HKT C Y+ D LYC HF +
Sbjct: 66 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLI 125
Query: 264 FKXTGSFSKNFTP 302
F + + FTP
Sbjct: 126 FAPKVVY-EEFTP 137
>emb|CAI20684.1| novel protein similar to vertebrate flavoprotein oxidoreductase
MICAL family protein [Danio rerio]
Length = 665
Score = 32.0 bits (71), Expect = 5.2
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGX--XSMXXYSSMDXXLYCKTHF 254
G C C + + ++ L+ +H++ HC S Y + YCK HF
Sbjct: 593 GSSDVCYFCGRRVYVMERLSAEGKFFHRSCFQCDHCSSTIRLSNYTYDQLHGKFYCKHHF 652
>ref|NP_733106.2| CG31439-PA [Drosophila melanogaster]
gb|AAN14054.2| CG31439-PA [Drosophila melanogaster]
Length = 881
Score = 32.0 bits (71), Expect = 5.2
Identities = 16/78 (20%), Positives = 28/78 (35%)
Frame = +1
Query: 67 PCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTAR 246
P + T+ T T +T++ +T T + TP T T
Sbjct: 677 PTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTCAPTTTTTCTPTTTTTTTCA 736
Query: 247 PTSXSSSXXPGASPRTSR 300
PT+ S++ + TS+
Sbjct: 737 PTTSSTTTTSTTTTCTSK 754
>ref|XP_696043.1| PREDICTED: similar to Protein MICAL-3 [Danio rerio]
Length = 1137
Score = 32.0 bits (71), Expect = 5.2
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 GXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGX--XSMXXYSSMDXXLYCKTHF 254
G C C + + ++ L+ +H++ HC S Y + YCK HF
Sbjct: 788 GSSDVCYFCGRRVYVMERLSAEGKFFHRSCFQCDHCSSTIRLSNYTYDQLHGKFYCKHHF 847
>gb|AAB81493.1| LIM domain protein [Drosophila yakuba]
Length = 663
Score = 31.6 bits (70), Expect = 6.8
Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Frame = +3
Query: 72 SFTGXXXKCTXCDKXXHFID----LLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLY 239
+ T C C K + ++ L I+HKT C Y+ D LY
Sbjct: 69 TITEKLENCHQCKKPVYKMEEVILRLKTETTIFHKTCLRCNDCGKHLKFDSYNVHDGSLY 128
Query: 240 CKTHFXQLF 266
C HF +F
Sbjct: 129 CSMHFKLIF 137
>gb|ABA55664.1| Hoglet [Monosiga ovata]
Length = 663
Score = 31.2 bits (69), Expect = 8.9
Identities = 16/77 (20%), Positives = 28/77 (36%)
Frame = +1
Query: 67 PCLSPARXTSAXXATXXXTSSTSSXXXXXSTIRHXXXXXTAKGXSRCXATPPWTXXCTAR 246
PC T++ +T T++TSS +T T + T T T
Sbjct: 223 PCTGGGSTTTSTSSTTTTTTTTSSTTSTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTT 282
Query: 247 PTSXSSSXXPGASPRTS 297
T+ +++ S T+
Sbjct: 283 TTTGTTTTTTTGSTTTT 299
>emb|CAE73949.1| Hypothetical protein CBG21573 [Caenorhabditis briggsae]
Length = 292
Score = 31.2 bits (69), Expect = 8.9
Identities = 13/57 (22%), Positives = 24/57 (42%)
Frame = +3
Query: 96 CTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLF 266
C CDK + ++ + +YH C + ++S + L CK H ++F
Sbjct: 192 CCICDKVVYPVEKVVANKNLYHIQCFKCCKCAKKLTPTNFNSHEGKLLCKVHMLEVF 248
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,844,450
Number of Sequences: 3454138
Number of extensions: 3831031
Number of successful extensions: 8568
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 7594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8523
length of database: 1,185,965,366
effective HSP length: 106
effective length of database: 819,826,738
effective search space used: 19675841712
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)