BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF18e02.yg.3.1
(315 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_922688.1| putative transcription regulatory protein ... 133 2e-30
gb|AAO22642.1| unknown protein [Arabidopsis thaliana] 89 4e-17
ref|NP_171710.3| transcription regulator [Arabidopsis thali... 89 4e-17
ref|XP_643319.1| CCR4-Not complex component, Not1 [Dictyost... 60 2e-08
emb|CAE70051.1| Hypothetical protein CBG16483 [Caenorhabdit... 54 2e-06
gb|AAA21168.1| Not-like (yeast ccr4/not complex component) ... 53 2e-06
gb|AAN36782.1| hypothetical protein [Plasmodium falciparum ... 49 5e-05
ref|XP_729198.1| hypothetical protein PY01432 [Plasmodium y... 48 1e-04
ref|XP_761687.1| hypothetical protein UM05540.1 [Ustilago m... 46 4e-04
emb|CAG58626.1| unnamed protein product [Candida glabrata C... 45 5e-04
ref|XP_414043.1| PREDICTED: similar to KIAA1007 protein; ad... 45 9e-04
dbj|BAC33267.1| unnamed protein product [Mus musculus] 44 0.001
gb|AAH18281.1| Cnot1 protein [Mus musculus] 44 0.001
gb|AAH99150.1| RGD1308009 protein [Rattus norvegicus] 44 0.001
gb|AAH86325.1| RGD1308009 protein [Rattus norvegicus] 44 0.001
ref|XP_906914.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_906911.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_453029.1| unnamed protein product [Kluyveromyces lac... 44 0.001
gb|AAH24317.1| CNOT1 protein [Homo sapiens] 44 0.001
emb|CAB55960.1| hypothetical protein [Homo sapiens] 44 0.001
ref|XP_853815.1| PREDICTED: similar to CCR4-NOT transcripti... 44 0.001
emb|CAD97851.1| hypothetical protein [Homo sapiens] 44 0.001
ref|XP_906894.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
dbj|BAC98068.2| mKIAA1007 protein [Mus musculus] 44 0.001
ref|XP_906919.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_511007.1| PREDICTED: hypothetical protein XP_511007 ... 44 0.001
ref|NP_057368.3| CCR4-NOT transcription complex, subunit 1 ... 44 0.001
ref|XP_906909.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_899766.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_678727.1| hypothetical protein [Plasmodium berghei s... 44 0.001
dbj|BAA76851.2| KIAA1007 protein [Homo sapiens] 44 0.001
ref|XP_613555.2| PREDICTED: similar to CCR4-NOT transcripti... 44 0.001
gb|AAH00779.2| CNOT1 protein [Homo sapiens] 44 0.001
ref|XP_906915.1| PREDICTED: CCR4-NOT transcription complex,... 44 0.001
ref|XP_709774.1| PREDICTED: similar to KIAA1007 protein iso... 43 0.003
ref|XP_709773.1| PREDICTED: similar to CCR4-NOT transcripti... 43 0.003
ref|XP_740543.1| hypothetical protein PC301763.00.0 [Plasmo... 43 0.003
ref|XP_683755.1| PREDICTED: CCR4-NOT transcription complex,... 43 0.003
ref|XP_678687.1| hypothetical protein [Plasmodium berghei s... 43 0.003
ref|XP_687048.1| PREDICTED: similar to CCR4-NOT transcripti... 43 0.003
emb|CAA42248.2| nuclear protein [Saccharomyces cerevisiae] ... 43 0.003
emb|CAA49721.1| CDC39 [Saccharomyces cerevisiae] >gi|416765... 43 0.003
ref|XP_740790.1| hypothetical protein [Plasmodium chabaudi ... 42 0.004
emb|CAH18093.1| hypothetical protein [Homo sapiens] 42 0.006
ref|XP_395830.2| PREDICTED: similar to CCR4-NOT transcripti... 41 0.010
ref|XP_731018.1| hypothetical protein PY03055 [Plasmodium y... 41 0.013
ref|NP_700914.1| hypothetical protein PF11_0049 [Plasmodium... 41 0.013
gb|EAR91854.1| CCR4-Not complex component, Not1 family prot... 41 0.013
gb|ABB47976.1| transcription regulatory protein, putative [... 39 0.048
emb|CAD98495.1| putative transcription regulatory protein, ... 38 0.11
ref|XP_667454.1| transcription regulatory protein [Cryptosp... 38 0.11
ref|XP_627566.1| cdc39p protein-like; C-terminal Not1 [Cryp... 38 0.11
ref|NP_983059.1| ABR112Cp [Eremothecium gossypii] >gi|44981... 36 0.40
emb|CAB08600.1| SPAC20G8.06 [Schizosaccharomyces pombe] >gi... 35 0.53
ref|XP_662569.1| hypothetical protein AN4965.2 [Aspergillus... 35 0.69
gb|EAL30224.1| GA10404-PA [Drosophila pseudoobscura] 34 1.5
gb|AAT94440.1| RE48574p [Drosophila melanogaster] 34 1.5
ref|NP_524193.2| knockout CG10573-PA [Drosophila melanogast... 34 1.5
gb|AAB62567.1| Knockout [Drosophila melanogaster] 34 1.5
ref|XP_505772.1| hypothetical protein [Yarrowia lipolytica]... 33 2.6
dbj|BAE57725.1| unnamed protein product [Aspergillus oryzae] 32 4.5
dbj|BAE03378.1| unnamed protein product [Staphylococcus hae... 32 4.5
gb|AAO03709.1| pyridoxal-deC [Staphylococcus epidermidis AT... 32 4.5
ref|XP_754595.1| Ccr4-Not transcription complex subunit NOT... 32 5.8
ref|ZP_00817567.1| transcriptional factor [Marinobacter aqu... 31 9.9
>ref|NP_922688.1| putative transcription regulatory protein [Oryza sativa (japonica
cultivar-group)]
gb|AAK55455.1| putative transcription regulatory protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP54975.1| transcription regulatory protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 2363
Score = 133 bits (334), Expect = 2e-30
Identities = 67/104 (64%), Positives = 80/104 (76%)
Frame = +3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTV 182
VSEQ+VA ISYFSIDSY+KLV +V+KYSSV+I P+KGS+ +KI+SV V
Sbjct: 1887 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVKYSSVDIGPSKGSLFNKILSVIV 1946
Query: 183 RTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
R IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 1947 RIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 1990
>gb|AAO22642.1| unknown protein [Arabidopsis thaliana]
Length = 682
Score = 89.0 bits (219), Expect = 4e-17
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3
Query: 66 SYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
S+ ID YAKLV +LKY + + ++ +LS+I++ TVR IQKDAE+KK S N +PYFR
Sbjct: 234 SFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMADTVRFIQKDAEDKKTSLNSKPYFR 293
Query: 246 LXINWLYDLTTTDGHHDGSNFQV 314
L INWL DL + D DG+NFQV
Sbjct: 294 LFINWLLDLCSLDPGTDGANFQV 316
>ref|NP_171710.3| transcription regulator [Arabidopsis thaliana]
Length = 2378
Score = 89.0 bits (219), Expect = 4e-17
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3
Query: 66 SYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
S+ ID YAKLV +LKY + + ++ +LS+I++ TVR IQKDAE+KK S N +PYFR
Sbjct: 1930 SFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMADTVRFIQKDAEDKKTSLNSKPYFR 1989
Query: 246 LXINWLYDLTTTDGHHDGSNFQV 314
L INWL DL + D DG+NFQV
Sbjct: 1990 LFINWLLDLCSLDPGTDGANFQV 2012
>ref|XP_643319.1| CCR4-Not complex component, Not1 [Dictyostelium discoideum]
gb|AAS38719.1| similar to Dictyostelium discoideum (Slime mold). ORF DG1040
(Fragment)
gb|EAL69314.1| CCR4-Not complex component, Not1 [Dictyostelium discoideum]
Length = 2526
Score = 60.1 bits (144), Expect = 2e-08
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
Y IDS+ + VVM++K++ P K ++L+K++SV ++ + KD E + FN RPY R+
Sbjct: 2095 YLEIDSWCRFVVMMVKHAD----PTKLNMLTKVLSVLIKILTKDYENNPSRFNQRPYLRI 2150
Query: 249 XINWLYDLTTTD 284
N L DLT+ D
Sbjct: 2151 FENLLVDLTSPD 2162
>emb|CAE70051.1| Hypothetical protein CBG16483 [Caenorhabditis briggsae]
Length = 2486
Score = 53.5 bits (127), Expect = 2e-06
Identities = 22/75 (29%), Positives = 46/75 (61%)
Frame = +3
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
H Y+++D++ KL+ +++++S + NK ++L K++++ V + D E +K FN PY
Sbjct: 2012 HRCYYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKTDFNAMPY 2071
Query: 240 FRLXINWLYDLTTTD 284
R+ I+ ++T D
Sbjct: 2072 HRILISLFNEITGPD 2086
>gb|AAA21168.1| Not-like (yeast ccr4/not complex component) protein 1 [Caenorhabditis
elegans]
ref|NP_498516.1| NOT-Like (yeast CCR4/NOT complex component) family member (ntl-1)
[Caenorhabditis elegans]
Length = 2500
Score = 53.1 bits (126), Expect = 2e-06
Identities = 22/75 (29%), Positives = 46/75 (61%)
Frame = +3
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
H Y+++D++ KL+ +++++S + NK ++L K++++ V + D E +K FN PY
Sbjct: 2027 HRCYYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKQDFNAMPY 2086
Query: 240 FRLXINWLYDLTTTD 284
R+ I+ ++T D
Sbjct: 2087 HRILISLFNEITGPD 2101
>gb|AAN36782.1| hypothetical protein [Plasmodium falciparum 3D7]
ref|NP_702058.1| hypothetical protein PF14_0170 [Plasmodium falciparum 3D7]
Length = 4466
Score = 48.9 bits (115), Expect = 5e-05
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 ISYFSIDSYAKLVVMVLKYSSVE-ITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
++Y IDS+ K+++ +LK +E I+P IL K++++ R I K E +K FN RPY
Sbjct: 3923 LNYNYIDSWTKMIITMLKLVDIEKISPI--FILQKVLNLICRVIHKKYESEKKHFNQRPY 3980
Query: 240 FRLXINWLYDL 272
FRL L D+
Sbjct: 3981 FRLLHCLLIDI 3991
>ref|XP_729198.1| hypothetical protein PY01432 [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA20763.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1264
Score = 47.8 bits (112), Expect = 1e-04
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 75 SIDSYAKLVVMVLKY-SSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLX 251
SID+ AK++V ++K S +ITP +L K++++ R + + +KK FN RPYFRL
Sbjct: 980 SIDALAKMIVSMMKLVDSQKITPYL--LLQKVMNIFCRILXYECRKKKNKFNQRPYFRLF 1037
Query: 252 INWLYDLTTTDGHHDGSN 305
++ L ++ + + + N
Sbjct: 1038 LSILIEINKNEKNIESYN 1055
>ref|XP_761687.1| hypothetical protein UM05540.1 [Ustilago maydis 521]
gb|EAK86313.1| hypothetical protein UM05540.1 [Ustilago maydis 521]
Length = 2118
Score = 45.8 bits (107), Expect = 4e-04
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = +3
Query: 78 IDSYAKLVVMVLKY----SSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
ID++++L+V+++KY + V K L+KI+S+ V + + EE F +P+FR
Sbjct: 1639 IDAFSRLIVLMIKYHADPTGVNNEQAKVHYLTKILSIVVLVLAQSHEELGVHFQQKPFFR 1698
Query: 246 LXINWLYDLTTTD 284
L + L+DL T+
Sbjct: 1699 LFSSLLHDLHATE 1711
>emb|CAG58626.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445707.1| unnamed protein product [Candida glabrata]
Length = 2090
Score = 45.4 bits (106), Expect = 5e-04
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
+ SID+ +K+++ +L + + ++G + I+SV + KD E +FN RPYFRL
Sbjct: 1620 FVSIDALSKMIIKLLIHQNWNDC-SRGDYFNMILSVILLVFAKDHGETNTTFNERPYFRL 1678
Query: 249 XINWLYDLTTTDGH 290
N LY+ + H
Sbjct: 1679 LSNLLYEWSQIRTH 1692
>ref|XP_414043.1| PREDICTED: similar to KIAA1007 protein; adrenal gland protein AD-005
[Gallus gallus]
Length = 2258
Score = 44.7 bits (104), Expect = 9e-04
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D E ++ F PY R
Sbjct: 1815 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHEVRQGEFQQLPYHR 1874
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1875 IFIMLLLELNAPEHVLETINFQ 1896
>dbj|BAC33267.1| unnamed protein product [Mus musculus]
Length = 424
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 51 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 110
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 111 IFIMLLLELNAPEHVLETINFQ 132
>gb|AAH18281.1| Cnot1 protein [Mus musculus]
Length = 1117
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 674 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 733
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 734 IFIMLLLELNAPEHVLETINFQ 755
>gb|AAH99150.1| RGD1308009 protein [Rattus norvegicus]
Length = 824
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 381 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 440
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 441 IFIMLLLELNAPEHVLETINFQ 462
>gb|AAH86325.1| RGD1308009 protein [Rattus norvegicus]
Length = 455
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 12 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 71
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 72 IFIMLLLELNAPEHVLETINFQ 93
>ref|XP_906914.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 13 [Mus
musculus]
ref|XP_928297.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 28 [Mus musculus]
Length = 2331
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1933 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1992
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1993 IFIMLLLELNAPEHVLETINFQ 2014
>ref|XP_906911.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 12 [Mus
musculus]
ref|XP_928292.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 27 [Mus musculus]
Length = 1343
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 900 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 959
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 960 IFIMLLLELNAPEHVLETINFQ 981
>ref|XP_453029.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH01880.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 2140
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
+ SID+ ++L+ +L + + K L+ ++SV KD + SFN RPYFRL
Sbjct: 1692 FTSIDALSRLITSLLVVQELNVEERK-EYLNLLLSVVTLVFAKDHQTNMTSFNERPYFRL 1750
Query: 249 XINWLYDLTTTDGHH 293
+ L D HH
Sbjct: 1751 YSSLLSDWDKLRDHH 1765
>gb|AAH24317.1| CNOT1 protein [Homo sapiens]
Length = 1620
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1177 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1236
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1237 IFIMLLLELNAPEHVLETINFQ 1258
>emb|CAB55960.1| hypothetical protein [Homo sapiens]
Length = 1100
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 657 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 716
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 717 IFIMLLLELNAPEHVLETINFQ 738
>ref|XP_853815.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a [Canis familiaris]
Length = 567
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 124 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 183
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 184 IFIMLLLELNAPEHVLETINFQ 205
>emb|CAD97851.1| hypothetical protein [Homo sapiens]
Length = 2150
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1928 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1987
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1988 IFIMLLLELNAPEHVLETINFQ 2009
>ref|XP_906894.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 7 [Mus
musculus]
ref|XP_928249.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 21 [Mus musculus]
Length = 2306
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1933 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1992
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1993 IFIMLLLELNAPEHVLETINFQ 2014
>dbj|BAC98068.2| mKIAA1007 protein [Mus musculus]
Length = 1458
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1015 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1074
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1075 IFIMLLLELNAPEHVLETINFQ 1096
>ref|XP_906919.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 15 [Mus
musculus]
ref|XP_928308.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 30 [Mus musculus]
Length = 2383
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1940 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1999
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 2000 IFIMLLLELNAPEHVLETINFQ 2021
>ref|XP_511007.1| PREDICTED: hypothetical protein XP_511007 [Pan troglodytes]
Length = 2402
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1928 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1987
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1988 IFIMLLLELNAPEHVLETINFQ 2009
>ref|NP_057368.3| CCR4-NOT transcription complex, subunit 1 isoform a [Homo sapiens]
Length = 2376
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1933 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1992
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1993 IFIMLLLELNAPEHVLETINFQ 2014
>ref|XP_906909.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 11
[Mus musculus]
ref|XP_928275.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 25 [Mus musculus]
Length = 778
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 335 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 394
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 395 IFIMLLLELNAPEHVLETINFQ 416
>ref|XP_899766.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 2 [Mus
musculus]
ref|XP_919363.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 16 [Mus musculus]
Length = 2376
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1933 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1992
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1993 IFIMLLLELNAPEHVLETINFQ 2014
>ref|XP_678727.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH96977.1| conserved hypothetical protein [Plasmodium berghei]
Length = 585
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 75 SIDSYAKLVVMVLKY-SSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLX 251
SID+ AK++V ++K S +ITP +L K++++ R + + +KK FN R YFRL
Sbjct: 132 SIDALAKMIVSMMKLVDSQKITPYL--LLQKVMNIFCRILVYECRKKKNKFNQRSYFRLF 189
Query: 252 INWLYDLTTTD 284
++ L +++ +
Sbjct: 190 LSILIEISKNE 200
>dbj|BAA76851.2| KIAA1007 protein [Homo sapiens]
Length = 1835
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1392 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1451
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1452 IFIMLLLELNAPEHVLETINFQ 1473
>ref|XP_613555.2| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a [Bos taurus]
Length = 2366
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1919 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1978
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1979 IFIMLLLELNAPEHVLETINFQ 2000
>gb|AAH00779.2| CNOT1 protein [Homo sapiens]
Length = 539
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 96 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 155
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 156 IFIMLLLELNAPEHVLETINFQ 177
>ref|XP_906915.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 14 [Mus
musculus]
ref|XP_928303.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 29 [Mus musculus]
Length = 1990
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1547 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1606
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1607 IFIMLLLELNAPEHVLETINFQ 1628
>ref|XP_709774.1| PREDICTED: similar to KIAA1007 protein isoform 5 [Danio rerio]
Length = 1830
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + ++ F PY R
Sbjct: 1387 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHR 1446
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1447 IFIMLLLELNAPEHVLETINFQ 1468
>ref|XP_709773.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a isoform 4 [Danio rerio]
Length = 2300
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + ++ F PY R
Sbjct: 1931 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHR 1990
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1991 IFIMLLLELNAPEHVLETINFQ 2012
>ref|XP_740543.1| hypothetical protein PC301763.00.0 [Plasmodium chabaudi chabaudi]
emb|CAH85935.1| hypothetical protein PC301763.00.0 [Plasmodium chabaudi]
Length = 547
Score = 43.1 bits (100), Expect = 0.003
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 78 IDSYAKLVVMVLKY-SSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXI 254
ID+ AK+VV ++K S +ITP +L K++++ R + + +K+ FN RPYFRL +
Sbjct: 136 IDALAKMVVSMMKLVDSQKITPYL--LLQKVMNMFCRIVVYECRKKQNQFNQRPYFRLFL 193
Query: 255 NWLYDLTTTD 284
+ L ++ +
Sbjct: 194 SILTEINKNE 203
>ref|XP_683755.1| PREDICTED: CCR4-NOT transcription complex, subunit 1 isoform 1 [Danio
rerio]
Length = 2374
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + ++ F PY R
Sbjct: 1931 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHR 1990
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1991 IFIMLLLELNAPEHVLETINFQ 2012
>ref|XP_678687.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH94250.1| conserved hypothetical protein [Plasmodium berghei]
Length = 2285
Score = 43.1 bits (100), Expect = 0.003
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 63 ISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
++Y IDS++K++V++L+ + +L K+++ R I K E +K FN RPYF
Sbjct: 1714 LNYNYIDSWSKMIVIILQLVEDIKGISPIIVLQKVLNSLCRIIHKRCEIEKRKFNQRPYF 1773
Query: 243 RLXINWLYDL 272
RL L D+
Sbjct: 1774 RLLHCLLNDI 1783
>ref|XP_687048.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a [Danio rerio]
Length = 1735
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D + ++ F PY R
Sbjct: 1289 YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHR 1348
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1349 IFIMLLLELNAPEHVLETINFQ 1370
>emb|CAA42248.2| nuclear protein [Saccharomyces cerevisiae]
ref|NP_010017.2| Component of the CCR4-NOT complex, which has multiple roles in
regulating mRNA levels including regulation of
transcription and destabilizing mRNAs by deadenylation;
basal transcription factor; Cdc39p [Saccharomyces
cerevisiae]
Length = 2108
Score = 42.7 bits (99), Expect = 0.003
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
+ +ID+ L++ +L + + ++ I SV V KD ++ +FN RPYFRL
Sbjct: 1637 FIAIDALGSLIIKLLILQGFK-DDTRRDYINAIFSVIVLVFAKDHSQEGTTFNERPYFRL 1695
Query: 249 XINWLYDLTTTDGHH 293
N LY+ T H+
Sbjct: 1696 FSNILYEWATIRTHN 1710
>emb|CAA49721.1| CDC39 [Saccharomyces cerevisiae]
sp|P25655|NOT1_YEAST General negative regulator of transcription subunit 1
Length = 2108
Score = 42.7 bits (99), Expect = 0.003
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
+ +ID+ L++ +L + + ++ I SV V KD ++ +FN RPYFRL
Sbjct: 1637 FIAIDALGSLIIKLLILQGFK-DDTRRDYINAIFSVIVLVFAKDHSQEGTTFNERPYFRL 1695
Query: 249 XINWLYDLTTTDGHH 293
N LY+ T H+
Sbjct: 1696 FSNILYEWATIRTHN 1710
>ref|XP_740790.1| hypothetical protein [Plasmodium chabaudi chabaudi]
emb|CAH87791.1| conserved hypothetical protein [Plasmodium chabaudi]
Length = 626
Score = 42.4 bits (98), Expect = 0.004
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +3
Query: 63 ISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
++Y ID+++K++V++L+ + +L K+++ R I K E +K FN RPYF
Sbjct: 105 LNYNYIDAWSKMIVIILQLVEDVKGISPIIVLQKVLNSLCRIIHKRCEIEKRKFNQRPYF 164
Query: 243 RLXINWLYDL 272
RL L D+
Sbjct: 165 RLLHCLLNDI 174
>emb|CAH18093.1| hypothetical protein [Homo sapiens]
Length = 2127
Score = 42.0 bits (97), Expect = 0.006
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
Y + D++ +L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R
Sbjct: 1684 YHNPDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR 1743
Query: 246 LXINWLYDLTTTDGHHDGSNFQ 311
+ I L +L + + NFQ
Sbjct: 1744 IFIMLLLELNAPEHVLETINFQ 1765
>ref|XP_395830.2| PREDICTED: similar to CCR4-NOT transcription complex, subunit 1
isoform a [Apis mellifera]
Length = 2381
Score = 41.2 bits (95), Expect = 0.010
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFR 245
+ S+D++ +LV +++K+S T K ++L+K++ + + +D E + F+ PY R
Sbjct: 1937 FHSLDAFVRLVALLVKHSGDSTNTHTKINLLNKVLGIVAGVLLQDHEIRGTDFHQLPYHR 1996
Query: 246 LXINWLYDLTTTDGHHDGSNFQV 314
+ I +L + + N+QV
Sbjct: 1997 IFIMLFLELCAPEPVLEAVNYQV 2019
>ref|XP_731018.1| hypothetical protein PY03055 [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA22583.1| similar to KIAA1007 protein-related [Plasmodium yoelii yoelii]
Length = 947
Score = 40.8 bits (94), Expect = 0.013
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 63 ISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
++Y IDS++K++V++L+ + +L K+++ I K E +K FN RPYF
Sbjct: 415 LNYNYIDSWSKMIVIILQLVEDIKGISPIIVLQKVLNSLCMIIHKRCEIEKRKFNQRPYF 474
Query: 243 RLXINWLYDL 272
RL L D+
Sbjct: 475 RLLHCLLNDI 484
>ref|NP_700914.1| hypothetical protein PF11_0049 [Plasmodium falciparum 3D7]
gb|AAN35638.1| hypothetical protein, conserved [Plasmodium falciparum 3D7]
Length = 3371
Score = 40.8 bits (94), Expect = 0.013
Identities = 19/67 (28%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 75 SIDSYAKLVVMVLKYSSVE-ITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLX 251
+ID+ AK+++ ++K ++ I+P + K++++ R I ++ + K++FN RPY+RL
Sbjct: 2641 TIDALAKMIICMMKLIDIQQISPFV--LFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLF 2698
Query: 252 INWLYDL 272
++ L ++
Sbjct: 2699 LSILIEI 2705
>gb|EAR91854.1| CCR4-Not complex component, Not1 family protein [Tetrahymena
thermophila SB210]
Length = 2505
Score = 40.8 bits (94), Expect = 0.013
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 63 ISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
+ + +DS+ KL+ ++ K +E K +L++I T+ K E FN RP+F
Sbjct: 2004 MDFTCVDSFTKLIEIIQKTCKIE--QYKKQLLNQIFDSIFITLTKYHETDMYEFNQRPFF 2061
Query: 243 RLXINWLYD 269
R+ N +YD
Sbjct: 2062 RIFFNLIYD 2070
>gb|ABB47976.1| transcription regulatory protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 2298
Score = 38.9 bits (89), Expect = 0.048
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 1887 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 1924
>emb|CAD98495.1| putative transcription regulatory protein, possible [Cryptosporidium
parvum]
Length = 2589
Score = 37.7 bits (86), Expect = 0.11
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 FSIDSYAKLVVMVLKYSSVEITPNKGS---ILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
F IDS +L+ + +Y + P + + I K +S+ R I KDAE FN RPY+
Sbjct: 2119 FPIDSLVRLITTMARY----VDPQQMAAVVITHKFLSILTRVIHKDAESH--GFNQRPYY 2172
Query: 243 RLXINWLYD 269
R+ + L +
Sbjct: 2173 RIFYSLLQE 2181
>ref|XP_667454.1| transcription regulatory protein [Cryptosporidium hominis TU502]
gb|EAL37219.1| transcription regulatory protein [Cryptosporidium hominis]
Length = 2661
Score = 37.7 bits (86), Expect = 0.11
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 FSIDSYAKLVVMVLKYSSVEITPNKGS---ILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
F IDS +L+ + +Y + P + + I K +S+ R I KDAE FN RPY+
Sbjct: 2191 FPIDSLVRLITTMARY----VDPQQMAAVVITHKFLSILTRVIHKDAESH--GFNQRPYY 2244
Query: 243 RLXINWLYD 269
R+ + L +
Sbjct: 2245 RIFYSLLQE 2253
>ref|XP_627566.1| cdc39p protein-like; C-terminal Not1 [Cryptosporidium parvum Iowa II]
gb|EAK89864.1| cdc39p protein-like; C-terminal Not1, CCR4-Not complex component;
Not1 [Cryptosporidium parvum]
Length = 2664
Score = 37.7 bits (86), Expect = 0.11
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 FSIDSYAKLVVMVLKYSSVEITPNKGS---ILSKIISVTVRTIQKDAEEKKASFNPRPYF 242
F IDS +L+ + +Y + P + + I K +S+ R I KDAE FN RPY+
Sbjct: 2194 FPIDSLVRLITTMARY----VDPQQMAAVVITHKFLSILTRVIHKDAESH--GFNQRPYY 2247
Query: 243 RLXINWLYD 269
R+ + L +
Sbjct: 2248 RIFYSLLQE 2256
>ref|NP_983059.1| ABR112Cp [Eremothecium gossypii]
gb|AAS50883.1| ABR112Cp [Ashbya gossypii ATCC 10895]
Length = 2141
Score = 35.8 bits (81), Expect = 0.40
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRL 248
+ ++D+ + L+ +L T ++ L+ I S KD E ++FN RPYFR
Sbjct: 1676 FTAVDALSNLIARLLYLQDFSQT-SRTDYLNLIFSTVTLVFAKDHEVNDSTFNERPYFRF 1734
Query: 249 XINWLYDLTTTDGHH 293
+ L + + GH+
Sbjct: 1735 FSSLLCEWESLRGHN 1749
>emb|CAB08600.1| SPAC20G8.06 [Schizosaccharomyces pombe]
ref|NP_593323.1| hypothetical protein SPAC20G8.06 [Schizosaccharomyces pombe 972h-]
Length = 2100
Score = 35.4 bits (80), Expect = 0.53
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +3
Query: 69 YFSIDSYAKLVVMVLKYS--SVEITPNKGSILSKIISVTVRTIQKDAEEKKASF-NPRPY 239
YF++D+YA L+V V+KY+ S E T + S+L + I + + + A F + + +
Sbjct: 1653 YFNVDAYASLLVNVVKYTEGSTEGTVSSKSVLFRKIIALIIGVFAELHNSMAEFVHQKTF 1712
Query: 240 FRLXINWLYDL 272
FRL + L +L
Sbjct: 1713 FRLFSSILSEL 1723
>ref|XP_662569.1| hypothetical protein AN4965.2 [Aspergillus nidulans FGSC A4]
gb|EAA61043.1| hypothetical protein AN4965.2 [Aspergillus nidulans FGSC A4]
Length = 2317
Score = 35.0 bits (79), Expect = 0.69
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 66 SYFSIDSYAKLVVMVLKYSSVEITP---NKGSILSKIISVTVRTIQKDAEEKKASFNPRP 236
++ ID+ AKLVV+++K+ P +K + + I+SV + + + +FN R
Sbjct: 1887 AFLYIDALAKLVVLLVKFQGEGTGPVKTSKSAYFNSILSVLLLVLNHHQVMRGEAFNQRV 1946
Query: 237 YFRLXINWLYDLTTTDGHH 293
+FRL + L + + + H
Sbjct: 1947 FFRLFSSILCEYSMSGLQH 1965
>gb|EAL30224.1| GA10404-PA [Drosophila pseudoobscura]
Length = 1046
Score = 33.9 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 135 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 296
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 354 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 407
>gb|AAT94440.1| RE48574p [Drosophila melanogaster]
Length = 1049
Score = 33.9 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 135 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 296
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 353 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 406
>ref|NP_524193.2| knockout CG10573-PA [Drosophila melanogaster]
gb|AAF51676.1| CG10573-PA [Drosophila melanogaster]
Length = 1049
Score = 33.9 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 135 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 296
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 353 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 406
>gb|AAB62567.1| Knockout [Drosophila melanogaster]
Length = 882
Score = 33.9 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 135 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 296
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 353 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 406
>ref|XP_505772.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG78583.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 2017
Score = 33.1 bits (74), Expect = 2.6
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 75 SIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKAS-----FNPRPY 239
++D AKL+V ++ + + ++++V V D E K FN +PY
Sbjct: 1577 AVDGLAKLLVTIISAHEATNAKRISAFVRQLLAVVVLVFAGDHEAKSGGESPVGFNEKPY 1636
Query: 240 FRLXINWLYDLTTTD 284
FRL + L +L+ +
Sbjct: 1637 FRLFSSILCELSEAE 1651
>dbj|BAE57725.1| unnamed protein product [Aspergillus oryzae]
Length = 2095
Score = 32.3 bits (72), Expect = 4.5
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +3
Query: 66 SYFSIDSYAKLVVMVLKYSSVEITP-----NKGSILSKIISVTVRTIQKDAEEKKASFNP 230
+Y ID+ AKLVV+++K+ TP +K + I+S+ V + + +FN
Sbjct: 1645 AYLYIDALAKLVVLLVKFQGE--TPGATKTSKSVYFNSILSLLVLVLNHHHVMRGEAFNQ 1702
Query: 231 RPYFRL 248
R +FRL
Sbjct: 1703 RVFFRL 1708
>dbj|BAE03378.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
ref|YP_251984.1| hypothetical protein SH0069 [Staphylococcus haemolyticus JCSC1435]
Length = 472
Score = 32.3 bits (72), Expect = 4.5
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 114 KYSSVEITPNKG----SILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTT 281
KY +E+ PNKG +L + + + + + + SF P P RL +WL D+ TT
Sbjct: 42 KYEKMEV-PNKGRDIYEVLKDLNNEVLNYLYRPNHPRSFSFIPGPASRL--SWLGDILTT 98
Query: 282 DGHHDGSNF 308
+ SNF
Sbjct: 99 ANNIHASNF 107
>gb|AAO03709.1| pyridoxal-deC [Staphylococcus epidermidis ATCC 12228]
ref|NP_763667.1| pyridoxal-deC [Staphylococcus epidermidis ATCC 12228]
Length = 474
Score = 32.3 bits (72), Expect = 4.5
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 114 KYSSVEITPNKG----SILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTT 281
KY +E+ PNKG +L + + + + + + SF P P RL +WL D+ TT
Sbjct: 44 KYEKMEV-PNKGRDIYEVLKDLNNEVLNYLYRPNHPRSFSFIPGPASRL--SWLGDILTT 100
Query: 282 DGHHDGSNF 308
+ SNF
Sbjct: 101 ANNIHASNF 109
>ref|XP_754595.1| Ccr4-Not transcription complex subunit NOT1 [Aspergillus fumigatus
Af293]
gb|EAL92557.1| Ccr4-Not transcription complex subunit (NOT1), putative [Aspergillus
fumigatus Af293]
Length = 2327
Score = 32.0 bits (71), Expect = 5.8
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 66 SYFSIDSYAKLVVMVLKYSSVEITPNKGS---ILSKIISVTVRTIQKDAEEKKASFNPRP 236
++ ID+ AKLV++++K+ +K S + I+S+ V + + +FN R
Sbjct: 1877 AFLYIDALAKLVILLVKFQGESTGSSKASKSVYFNSILSMLVLVLNHHHVIRGEAFNQRV 1936
Query: 237 YFRL 248
+FRL
Sbjct: 1937 FFRL 1940
>ref|ZP_00817567.1| transcriptional factor [Marinobacter aquaeolei VT8]
gb|EAO99111.1| transcriptional factor [Marinobacter aquaeolei VT8]
Length = 335
Score = 31.2 bits (69), Expect = 9.9
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = +3
Query: 87 YAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAEEKKASF------NPRPYFR 245
Y ++ MV +Y S+ T + + SVT+R+IQ+D E+ A F N RPY
Sbjct: 8 YLTMLRMVPRYPRSITTTELASRLEEQGFSVTMRSIQRDLEKLSADFPLLVDENSRPY-- 65
Query: 246 LXINWLYDLTTT 281
W +D T
Sbjct: 66 ---RWSFDRNAT 74
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 586,729,555
Number of Sequences: 3454138
Number of extensions: 9792544
Number of successful extensions: 23938
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 23765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23935
length of database: 1,185,965,366
effective HSP length: 80
effective length of database: 909,634,326
effective search space used: 21831223824
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)