BLASTX 2.2.6 [Apr-09-2003]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3202900.2.1
         (938 letters)

Database: nr 
           3,454,138 sequences; 1,185,965,366 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD54489.1|  hypothetical protein [Oryza sativa (japonic...   117   6e-25
gb|ABD28514.1|  SMAD/FHA [Medicago truncatula]                     86   3e-15
ref|NP_187992.2|  unknown protein [Arabidopsis thaliana]           73   1e-11
dbj|BAB01927.1|  unnamed protein product [Arabidopsis thaliana]    65   3e-09
ref|XP_502895.1|  hypothetical protein [Yarrowia lipolytica]...    38   0.65 

>dbj|BAD54489.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 359

 Score =  117 bits (293), Expect = 6e-25
 Identities = 63/134 (47%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = -1

Query: 827 EEDEGAAVDSDVEGFDI--DLAAIDPVREFGFLSMGHEFDSYPKGRIRAPKDWNWFLEEA 654
           E +   + DSD E  D+  DL++IDPVREFGFLSMGHEFD+YPKGRIR PKDWNWFLEE 
Sbjct: 175 EAEAACSGDSDAEAEDLNFDLSSIDPVREFGFLSMGHEFDNYPKGRIRPPKDWNWFLEEV 234

Query: 653 KRTSDDEASGKRRSRSKVLXXXXXXXXXXXXXXXXXXXXXXEKESTGRVTSVKRPKYTTR 474
           ++ SDDE   + + + K                        +K+S  R +SVKR KY TR
Sbjct: 235 RKGSDDEDDEEGKLKGK---GANKKNEGQREDEDWIGESEDDKDSLSRGSSVKRSKYVTR 291

Query: 473 SKSSEKHSRENSKT 432
           SK  +K  +E ++T
Sbjct: 292 SKEPKKPRKEKTET 305



>gb|ABD28514.1| SMAD/FHA [Medicago truncatula]
          Length = 303

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
 Frame = -1

Query: 803 DSDVEGFDIDLAAIDPVREFGFLSMGHEFDSYPKGRIRAPKDWNWFLEEAKRTSDDEASG 624
           +S++E   +D++ IDP++EFGFL M HEFD YPKG IR  ++W WFLEE  + S+DE   
Sbjct: 110 ESEIEFDQLDISQIDPIKEFGFLVMRHEFDQYPKGMIRNVENWEWFLEEPSKESEDEDDF 169

Query: 623 KRRSRSKVLXXXXXXXXXXXXXXXXXXXXXXEKESTGRVTSVKRPKYTTRSKSSEKHSRE 444
           + + + K                        +KE   +V   K+P+Y+TRSK +   +R+
Sbjct: 170 EEKRKIK----GKRKVFRDNEDDVWNGDSEDDKELVAKVGKGKKPRYSTRSKDNRGPNRD 225

Query: 443 -----NSKTGSGRSI 414
                NSK     S+
Sbjct: 226 IKDSSNSKRKKATSV 240



>ref|NP_187992.2| unknown protein [Arabidopsis thaliana]
          Length = 309

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
 Frame = -1

Query: 764 IDPVREFGFLSMGHEFDSYPKGRIRAPKDWNWFLEEAKR-TSDDEASGKRRSRSKVLXXX 588
           IDPV+EFGFL +G EFD YPK R+R  K W WFLE++    SD +  G ++ R  +    
Sbjct: 140 IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLEDSTNGNSDGDEDGDKKGRKGL--GK 197

Query: 587 XXXXXXXXXXXXXXXXXXXEKESTGRVTSVKRPKYTTRSKSSEKHSRENSKTGSGRSI-- 414
                              +KE   +   V  P Y+TRSK ++K S  +S + +G     
Sbjct: 198 KRRRKKGNEDDDWSVESDEDKELMVKSKRVVTPTYSTRSKKTKKDSNASSSSSNGAQTKQ 257

Query: 413 --XXXXXXXXXXXXTLGGFLVN 354
                         TLGGF+V+
Sbjct: 258 RGRADVEEEDDDDETLGGFIVS 279



>dbj|BAB01927.1| unnamed protein product [Arabidopsis thaliana]
          Length = 368

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
 Frame = -1

Query: 755 VREFGFLSMGHEFDSYPKGRIRAPKDWNWFLEEAKR-TSDDEASGKRRSRSKVLXXXXXX 579
           V EFGFL +G EFD YPK R+R  K W WFLE++    SD +  G ++ R  +       
Sbjct: 202 VAEFGFLVIGKEFDQYPKSRVRDIKQWEWFLEDSTNGNSDGDEDGDKKGRKGL--GKKRR 259

Query: 578 XXXXXXXXXXXXXXXXEKESTGRVTSVKRPKYTTRSKSSEKHSRENSKTGSGRSI----X 411
                           +KE   +   V  P Y+TRSK ++K S  +S + +G        
Sbjct: 260 RKKGNEDDDWSVESDEDKELMVKSKRVVTPTYSTRSKKTKKDSNASSSSSNGAQTKQRGR 319

Query: 410 XXXXXXXXXXXTLGGFLVN 354
                      TLGGF+V+
Sbjct: 320 ADVEEEDDDDETLGGFIVS 338



>ref|XP_502895.1| hypothetical protein [Yarrowia lipolytica]
 emb|CAG81086.1| unnamed protein product [Yarrowia lipolytica CLIB122]
          Length = 1213

 Score = 37.7 bits (86), Expect = 0.65
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -1

Query: 788 GFDIDLAAIDPVREFGFL---SMGHEFDSYPKGRIRAPKDWNWFLEEAKRTSDDE 633
           G  +  AA D +REFG       GHE++  P+ R +  K+  WF ++ + T +DE
Sbjct: 151 GRSVTFAAKDRIREFGHSLDGEEGHEYEQDPEERAQIKKNTYWFEDDEEDTEEDE 205



  Database: nr
    Posted date:  Apr 6, 2006  2:41 PM
  Number of letters in database: 1,185,965,366
  Number of sequences in database:  3,454,138
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,483,267,104
Number of Sequences: 3454138
Number of extensions: 27054756
Number of successful extensions: 71842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71800
length of database: 1,185,965,366
effective HSP length: 130
effective length of database: 736,927,426
effective search space used: 134120791532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)