BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115474.2.1
(798 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD01584.1| histidine kinase 2 [Zea mays] 408 e-143
ref|XP_463649.1| putative histidine kinase [Oryza sativa (j... 360 e-120
gb|ABB76249.1| hybrid type histidine kinase [Oryza sativa (... 360 e-120
dbj|BAD88327.1| putative histidine kinase 2 [Oryza sativa (... 360 e-120
gb|AAO59549.1| histidine kinase [Oryza sativa (indica culti... 360 e-120
gb|AAO59548.1| histidine kinase [Oryza sativa (indica culti... 360 e-120
ref|NP_564276.1| AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Ara... 212 7e-59
ref|NP_568532.1| AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) [Ara... 202 1e-54
dbj|BAB09274.1| histidine kinase-like protein [Arabidopsis ... 202 1e-54
gb|AAP37766.1| At5g35750 [Arabidopsis thaliana] >gi|2731184... 202 1e-54
gb|AAF99730.1| F17L21.11 [Arabidopsis thaliana] 194 1e-53
gb|AAM14700.1| cytokinin receptor [Catharanthus roseus] 195 2e-51
ref|XP_469566.1| putative histidine kinase [Oryza sativa (j... 193 3e-51
emb|CAC09578.1| histidine kinase receptor [Fagus sylvatica] 167 6e-50
emb|CAF31355.1| putative histidine kinase [Cucurbita maxima] 185 7e-48
dbj|BAD01586.1| histidine kinase 3 [Zea mays] 189 8e-47
dbj|BAD01585.1| histidine kinase 3 [Zea mays] 189 8e-47
ref|NP_565277.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis th... 188 2e-46
dbj|BAB33310.1| cytokinin receptor CRE1a [Arabidopsis thali... 188 2e-46
ref|NP_849925.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis th... 188 2e-46
dbj|BAB33311.1| cytokinin receptor CRE1b [Arabidopsis thali... 188 2e-46
dbj|BAB20583.1| histidine kinase 1 [Zea mays] 187 3e-46
dbj|BAE80686.1| histidine kinase [Zea mays] 186 9e-46
gb|AAK13126.1| Histidine-kinase like protein [Oryza sativa ... 166 3e-45
ref|XP_467688.1| putative histidine kinase 1 [Oryza sativa ... 173 2e-43
gb|ABD49494.1| cytokinin receptor 1 [Physcomitrella patens] 177 3e-43
dbj|BAE80689.1| histidine kinase [Zea mays] 173 6e-42
dbj|BAE80688.1| histidine kinase [Zea mays] 173 8e-42
dbj|BAE80687.1| histidine kinase [Zea mays] 173 8e-42
gb|ABD49495.1| cytokinin receptor 2 [Physcomitrella patens] 172 2e-41
ref|NP_921024.1| putative histidine kinase [Oryza sativa (j... 136 2e-36
gb|ABA88306.1| Hpt domain protein [Pelobacter carbinolicus ... 100 1e-19
ref|ZP_01128746.1| Response regulator receiver:ATP-binding ... 97 5e-19
gb|EAN29819.1| PAS [Magnetococcus sp. MC-1] >gi|69256183|re... 95 3e-18
dbj|BAC60018.1| putative histidine kinase [Vibrio parahaemo... 94 4e-18
gb|AAZ48812.1| Response regulator receiver:ATP-binding regi... 93 1e-17
ref|ZP_00658601.1| PAS [Nocardioides sp. JS614] >gi|7115617... 93 1e-17
emb|CAG23023.1| hypothetical protein [Photobacterium profun... 92 2e-17
ref|ZP_00533552.1| Response regulator receiver:ATP-binding ... 92 3e-17
ref|ZP_01090668.1| FOG: CheY-like receiver [Blastopirellula... 91 5e-17
ref|ZP_00988878.1| putative histidine kinase [Vibrio splend... 91 6e-17
gb|EAN29674.1| PAS [Magnetococcus sp. MC-1] >gi|69256468|re... 91 6e-17
gb|AAB03699.1| Nik-1 90 8e-17
ref|ZP_00828155.1| COG2202: FOG: PAS/PAC domain [Yersinia f... 90 8e-17
gb|EAQ93286.1| hypothetical protein CHGG_01521 [Chaetomium ... 90 8e-17
gb|AAB03698.1| Nik-1 [Neurospora crassa] 90 8e-17
gb|AAB01979.1| Os-1p [Neurospora crassa] >gi|85113126|ref|X... 90 8e-17
ref|ZP_00601697.1| PAS [Rubrobacter xylanophilus DSM 9941] ... 90 8e-17
dbj|BAB40947.1| histidine kinase [Magnaporthe grisea] 90 8e-17
ref|ZP_00600877.1| PAS [Rubrobacter xylanophilus DSM 9941] ... 90 8e-17
ref|ZP_00592307.1| Response regulator receiver:ATP-binding ... 90 1e-16
gb|AAL30826.1| two-component osmosensing histidine kinase B... 90 1e-16
gb|AAL37947.1| two-component osmosensing histidine-kinase [... 90 1e-16
ref|ZP_00674598.1| PAS [Trichodesmium erythraeum IMS101] >g... 89 1e-16
ref|YP_435070.1| Signal transduction histidine kinase [Hahe... 89 1e-16
ref|NP_900552.1| probable sensor/response regulator hybrid ... 89 2e-16
ref|ZP_00317496.1| COG0642: Signal transduction histidine k... 89 2e-16
ref|ZP_00505065.1| PAS [Clostridium thermocellum ATCC 27405... 88 3e-16
gb|AAZ45217.1| Response regulator receiver:ATP-binding regi... 88 3e-16
ref|ZP_01109417.1| multi-sensor hybrid histidine kinase [Al... 88 3e-16
ref|ZP_01063537.1| putative histidine kinase [Vibrio sp. ME... 88 4e-16
ref|ZP_00054434.2| COG0784: FOG: CheY-like receiver [Magnet... 87 5e-16
dbj|BAE62834.1| unnamed protein product [Aspergillus oryzae] 87 5e-16
ref|ZP_00591131.1| PAS [Prosthecochloris aestuarii DSM 271]... 87 7e-16
gb|AAR34678.1| sensor histidine kinase/response regulator [... 87 9e-16
gb|AAD09491.1| histidine kinase FIK [Fusarium solani f. sp.... 86 1e-15
gb|EAO24717.1| PAS [Syntrophomonas wolfei subsp. wolfei str... 86 1e-15
gb|EAN28159.1| PAS [Magnetococcus sp. MC-1] >gi|69259263|re... 86 1e-15
dbj|BAE67237.1| two-component system sensor protein [Xantho... 86 1e-15
dbj|BAE49914.1| Signal transduction histidine kinase [Magne... 86 1e-15
gb|AAD40816.1| histidine kinase [Fusarium solani f. sp. pisi] 86 1e-15
ref|ZP_00550287.1| PAS [Desulfuromonas acetoxidans DSM 684]... 86 2e-15
ref|ZP_00054895.2| COG0642: Signal transduction histidine k... 86 2e-15
ref|ZP_01091085.1| Response regulator receiver:ATP-binding ... 86 2e-15
gb|AAZ48443.1| PAS [Dechloromonas aromatica RCB] >gi|719093... 86 2e-15
ref|XP_387294.1| hypothetical protein FG07118.1 [Gibberella... 86 2e-15
gb|AAR35948.1| sensor histidine kinase/response regulator [... 86 2e-15
ref|ZP_00660842.1| PAS [Prosthecochloris vibrioformis DSM 2... 86 2e-15
ref|ZP_00818797.1| Response regulator receiver:ATP-binding ... 86 2e-15
gb|AAR30126.1| putative histidine kinase NIK1p [Gibberella ... 86 2e-15
ref|ZP_00764744.1| COG0642: Signal transduction histidine k... 85 3e-15
emb|CAG22411.1| hypothetical two-component sensor [Photobac... 85 3e-15
gb|AAU10313.1| two-component histidine kinase [Alternaria b... 85 4e-15
gb|AAU10319.1| two-component histidine kinase [Alternaria b... 85 4e-15
ref|ZP_00419673.1| Response regulator receiver:ATP-binding ... 85 4e-15
ref|ZP_01062767.1| hypothetical protein MED222_08498 [Vibri... 85 4e-15
ref|XP_662083.1| hypothetical protein AN4479.2 [Aspergillus... 85 4e-15
gb|AAM05416.1| sensory transduction histidine kinase [Metha... 85 4e-15
gb|AAF04854.1| histidine protein kinase homolog GacS [Azoto... 85 4e-15
gb|AAQ19476.1| histidine kinase J7 [Emericella nidulans] 85 4e-15
ref|NP_744030.1| sensor histidine kinase/response regulator... 85 4e-15
ref|ZP_00902914.1| Response regulator receiver:ATP-binding ... 85 4e-15
ref|ZP_00659515.1| PAS [Nocardioides sp. JS614] >gi|7115521... 84 5e-15
ref|YP_476763.1| sensory box histidine kinase/response regu... 84 5e-15
ref|ZP_00520847.1| Response regulator receiver:ATP-binding ... 84 5e-15
ref|ZP_00832341.1| COG2202: FOG: PAS/PAC domain [Yersinia i... 84 5e-15
ref|ZP_00990579.1| hypothetical protein V12B01_11270 [Vibri... 84 6e-15
ref|XP_749489.1| two-component osmosensing histidine kinase... 84 6e-15
ref|ZP_01113539.1| sensor/response regulator hybrid [Reinek... 84 6e-15
ref|ZP_00687387.1| Response regulator receiver:ATP-binding ... 84 6e-15
gb|AAO07691.1| FOG: CheY-like receiver [Vibrio vulnificus C... 84 6e-15
dbj|BAC97255.1| conserved hypothetical protein [Vibrio vuln... 84 6e-15
gb|AAP80772.1| MmoS [Methylococcus capsulatus] 84 8e-15
gb|AAU92711.1| sensory box histidine kinase/response regula... 84 8e-15
gb|AAZ44799.1| PAS [Dechloromonas aromatica RCB] >gi|719056... 84 8e-15
ref|ZP_00523020.1| Response regulator receiver:ATP-binding ... 84 8e-15
ref|ZP_00817298.1| Response regulator receiver:ATP-binding ... 84 8e-15
dbj|BAE52539.1| Signal transduction histidine kinase [Magne... 84 8e-15
gb|AAZ48868.1| PAS [Dechloromonas aromatica RCB] >gi|719097... 84 8e-15
dbj|BAC78687.1| two-component histidine kinase [Cochliobolu... 83 1e-14
dbj|BAC88576.1| two-component hybrid sensor and regulator [... 83 1e-14
gb|AAR29899.1| putative histidine kinase NIK1p [Cochliobolu... 83 1e-14
dbj|BAC78679.1| two-component histidine kinase [Cochliobolu... 83 1e-14
dbj|BAC78683.1| two-component histidine kinase [Cochliobolu... 83 1e-14
dbj|BAC78682.1| two-component histidine kinase [Cochliobolu... 83 1e-14
dbj|BAC78681.1| two-component histidine kinase [Cochliobolu... 83 1e-14
dbj|BAC78680.1| two-component histidine kinase [Cochliobolu... 83 1e-14
ref|ZP_00208565.1| COG0784: FOG: CheY-like receiver [Magnet... 83 1e-14
dbj|BAE51443.1| Signal transduction histidine kinase [Magne... 83 1e-14
ref|YP_432114.1| FOG: PAS/PAC domain [Hahella chejuensis KC... 83 1e-14
dbj|BAD37547.1| putative histidine kinase 1 [Oryza sativa (... 83 1e-14
ref|YP_433554.1| Signal transduction histidine kinase [Hahe... 83 1e-14
ref|ZP_00317632.1| COG2202: FOG: PAS/PAC domain [Microbulbi... 83 1e-14
ref|ZP_00659124.1| Response regulator receiver:ATP-binding ... 83 1e-14
emb|CAA21950.1| histidine kinase [Candida albicans] 83 1e-14
ref|XP_716936.1| hypothetical protein CaO19_12648 [Candida ... 83 1e-14
gb|AAC72284.1| Nik1p [Candida albicans] 83 1e-14
gb|AAC23929.1| histidine kinase [Candida albicans] 83 1e-14
dbj|BAA24952.1| homologue of histidine kinase [Candida albi... 83 1e-14
dbj|BAE44787.1| hypothetical protein [Candida albicans] >gi... 83 1e-14
ref|ZP_00836035.1| Response regulator receiver:ATP-binding ... 83 1e-14
ref|ZP_00053728.2| COG0642: Signal transduction histidine k... 83 1e-14
ref|ZP_00105786.1| COG0784: FOG: CheY-like receiver [Nostoc... 83 1e-14
ref|NP_719532.1| sensory transduction histidine kinase [She... 82 2e-14
ref|ZP_00953127.1| sensory box histidine kinase/response re... 82 2e-14
dbj|BAE52242.1| Sensor protein gacS [Magnetospirillum magne... 82 2e-14
gb|AAS97088.1| sensory box histidine kinase/response regula... 82 2e-14
ref|ZP_01074303.1| probable sensor/response regulator hybri... 82 2e-14
ref|XP_503487.1| hypothetical protein [Yarrowia lipolytica]... 82 2e-14
gb|ABA57772.1| Hybrid signal transduction histidine kinase ... 82 2e-14
gb|ABA24293.1| GAF Sensor Hybrid Histidine Kinase [Anabaena... 82 2e-14
ref|ZP_00763921.1| COG0642: Signal transduction histidine k... 82 2e-14
ref|ZP_01114114.1| probable two-component sensor [Reinekea ... 82 2e-14
dbj|BAC78684.1| two-component histidine kinase [Cochliobolu... 82 2e-14
ref|ZP_00621624.1| Response regulator receiver:ATP-binding ... 82 2e-14
gb|ABB38740.1| histidine kinase [Desulfovibrio desulfurican... 82 3e-14
ref|ZP_00908721.1| PAS [Clostridium beijerincki NCIMB 8052]... 82 3e-14
ref|ZP_00849255.1| PAS [Shewanella sp. ANA-3] >gi|78507803|... 82 3e-14
gb|AAM35383.1| two-component system sensor protein [Xanthom... 82 3e-14
gb|EAN29681.1| PAS [Magnetococcus sp. MC-1] >gi|69256475|re... 82 3e-14
ref|ZP_01109800.1| GGDEF domain protein [Alteromonas macleo... 82 3e-14
emb|CAG91021.1| unnamed protein product [Debaryomyces hanse... 82 3e-14
gb|AAO11010.1| Signal transduction histidine kinase [Vibrio... 81 4e-14
dbj|BAC94392.1| signal transduction histidine kinase [Vibri... 81 4e-14
ref|YP_433070.1| Signal transduction histidine kinase [Hahe... 81 4e-14
ref|XP_681214.1| hypothetical protein AN7945.2 [Aspergillus... 81 4e-14
gb|AAM39799.1| two-component system sensor protein [Xanthom... 81 4e-14
gb|AAQ19474.1| histidine kinase G2 [Emericella nidulans] 81 4e-14
gb|EAN29403.1| Response regulator receiver:ATP-binding regi... 81 4e-14
emb|CAJ22159.1| two-component system sensor protein [Xantho... 81 4e-14
emb|CAG35088.1| probable two-component system sensory/regul... 81 4e-14
ref|ZP_01133429.1| probable sensor/response regulator hybri... 81 4e-14
gb|ABC23161.1| Multi-sensor Hybrid Histidine Kinase [Rhodos... 81 5e-14
emb|CAI86697.1| putative sensor protein [Pseudoalteromonas ... 81 5e-14
ref|YP_315026.1| Multi-sensor Hybrid Histidine Kinase [Thio... 81 5e-14
dbj|BAE50760.1| Signal transduction histidine kinase [Magne... 81 5e-14
ref|ZP_01074274.1| serine/threonine kinase with two-compone... 81 5e-14
gb|ABA24376.1| Multi-sensor Hybrid Histidine Kinase [Anabae... 81 5e-14
dbj|BAC62572.1| hypothetical protein [Vibrio parahaemolytic... 81 5e-14
gb|AAG07499.1| probable sensor/response regulator hybrid [P... 81 5e-14
ref|ZP_00137562.2| COG2202: FOG: PAS/PAC domain [Pseudomona... 81 5e-14
ref|ZP_00973288.1| COG2202: FOG: PAS/PAC domain [Pseudomona... 81 5e-14
ref|ZP_00967483.1| COG2202: FOG: PAS/PAC domain [Pseudomona... 81 5e-14
ref|ZP_00908717.1| PAS [Clostridium beijerincki NCIMB 8052]... 81 5e-14
ref|ZP_01166609.1| histidine kinase response regulator hybr... 80 7e-14
ref|ZP_00316939.1| COG0784: FOG: CheY-like receiver [Microb... 80 7e-14
dbj|BAB73078.1| two-component hybrid sensor and regulator [... 80 7e-14
ref|YP_476201.1| sensory box histidine kinase/response regu... 80 7e-14
ref|ZP_00818428.1| Response regulator receiver:ATP-binding ... 80 7e-14
ref|YP_314745.1| Multi-sensor Hybrid Histidine Kinase [Thio... 80 9e-14
dbj|BAA17992.1| hybrid sensory kinase [Synechocystis sp. PC... 80 9e-14
gb|AAY93499.1| sensor histidine kinase/response regulator [... 80 9e-14
gb|ABB23193.1| PAS/PAC sensor hybrid histidine kinase [Pelo... 80 9e-14
ref|ZP_00310815.1| COG0784: FOG: CheY-like receiver [Cytoph... 80 9e-14
dbj|BAB73582.1| two-component hybrid sensor and regulator [... 80 9e-14
gb|AAN49740.1| two-component hybrid sensor and regulator [L... 80 1e-13
gb|AAM89215.1| hybrid histidine kinase [Tritrichomonas foetus] 80 1e-13
ref|YP_001394.1| histidine kinase response regulator hybrid... 80 1e-13
gb|AAZ98829.1| cytokinin independent 2 [Arabidopsis thaliana] 80 1e-13
ref|ZP_00676542.1| PAS [Pelobacter propionicus DSM 2379] >g... 80 1e-13
ref|NP_901251.1| probable sensor/response hybrid [Chromobac... 80 1e-13
ref|ZP_00583064.1| PAS [Shewanella baltica OS155] >gi|68518... 80 1e-13
gb|EAO24426.1| PAS [Syntrophomonas wolfei subsp. wolfei str... 80 1e-13
gb|AAW88086.1| sensory transduction protein kinase [Vibrio ... 80 1e-13
ref|NP_196633.1| AHK5 [Arabidopsis thaliana] >gi|10129650|e... 80 1e-13
ref|ZP_01133430.1| putative sensor protein [Pseudoalteromon... 80 1e-13
ref|ZP_00530683.1| Response regulator receiver:ATP-binding ... 80 1e-13
ref|ZP_00855004.1| PAS [Shewanella sp. MR-7] >gi|78510268|g... 79 1e-13
ref|ZP_00882182.1| PAS [Shewanella sp. MR-4] >gi|82405384|g... 79 1e-13
ref|ZP_00815187.1| PAS [Shewanella putrefaciens CN-32] >gi|... 79 1e-13
ref|ZP_00055969.2| COG0642: Signal transduction histidine k... 79 1e-13
gb|AAZ64691.1| PAS [Ralstonia eutropha JMP134] >gi|73539168... 79 1e-13
ref|ZP_00530893.1| PAS [Chlorobium phaeobacteroides BS1] >g... 79 2e-13
gb|AAQ07255.1| putative sensor kinase PK4 [Oryza sativa] 79 2e-13
gb|ABB37345.1| periplasmic sensor hybrid histidine kinase [... 79 2e-13
ref|ZP_00836597.1| PAS [Shewanella sp. PV-4] >gi|78361632|g... 79 2e-13
gb|AAZ48415.1| Response regulator receiver:ATP-binding regi... 79 2e-13
gb|EAN28230.1| Response regulator receiver:ATP-binding regi... 79 2e-13
ref|YP_237476.1| Response regulator receiver:ATP-binding re... 79 2e-13
gb|AAZ36841.1| sensor histidine kinase/response regulator [... 79 2e-13
ref|ZP_01090362.1| ammonium/methylammonium permease [Blasto... 79 2e-13
ref|ZP_00676459.1| PAS [Pelobacter propionicus DSM 2379] >g... 79 3e-13
ref|ZP_01154229.1| PAS [Methanosaeta thermophila PT] >gi|88... 79 3e-13
ref|ZP_00586405.1| Response regulator receiver:ATP-binding ... 79 3e-13
ref|ZP_00775653.1| PAS [Pseudoalteromonas atlantica T6c] >g... 79 3e-13
gb|AAY96071.1| sensor histidine kinase/response regulator [... 79 3e-13
ref|NP_716490.1| sensory box histidine kinase/response regu... 79 3e-13
gb|AAW87430.1| sensory transduction protein kinase [Vibrio ... 79 3e-13
gb|ABA72355.1| Periplasmic Sensor Hybrid Histidine Kinase [... 79 3e-13
ref|ZP_00590975.1| PAS [Prosthecochloris aestuarii DSM 271]... 79 3e-13
ref|NP_901291.1| probable sensor/response regulatory hybrid... 78 3e-13
ref|ZP_00835929.1| PAS [Shewanella sp. PV-4] >gi|78362180|g... 78 3e-13
emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Woli... 78 3e-13
ref|ZP_00678575.1| Response regulator receiver:ATP-binding ... 78 3e-13
ref|ZP_00052614.1| COG0642: Signal transduction histidine k... 78 3e-13
ref|ZP_00504495.1| Response regulator receiver:ATP-binding ... 78 3e-13
ref|ZP_01063121.1| hypothetical two-component sensor [Vibri... 78 4e-13
emb|CAI85186.1| putative sensor protein [Pseudoalteromonas ... 78 4e-13
ref|ZP_00695008.1| PAS [Rhodoferax ferrireducens DSM 15236]... 78 4e-13
gb|EAN28038.1| Response regulator receiver:ATP-binding regi... 78 4e-13
gb|EAN26742.1| Response regulator receiver:ATP-binding regi... 78 4e-13
ref|ZP_00989210.1| hypothetical two-component sensor [Vibri... 78 4e-13
ref|ZP_01118139.1| sensory transduction histidine kinase [P... 78 4e-13
gb|AAM37343.1| two-component system sensor protein [Xanthom... 78 4e-13
gb|AAM41638.1| two-component system sensor protein [Xanthom... 78 4e-13
emb|CAJ24348.1| two-component system sensor histidine kinas... 78 4e-13
ref|ZP_00559093.1| PAS [Desulfitobacterium hafniense DCB-2]... 77 6e-13
gb|AAK25585.1| sensor histidine kinase/response regulator [... 77 6e-13
ref|ZP_00136151.1| COG0642: Signal transduction histidine k... 77 6e-13
gb|AAK54091.2| histidine kinase DhkJ [Dictyostelium discoid... 77 6e-13
ref|XP_642053.1| histidine kinase [Dictyostelium discoideum... 77 6e-13
ref|ZP_01019711.1| Response regulator receiver:ATP-binding ... 77 6e-13
ref|YP_432128.1| Signal transduction histidine kinase [Hahe... 77 6e-13
gb|AAG06212.1| probable sensor/response regulator hybrid [P... 77 6e-13
gb|AAZ36830.1| sensor histidine kinase/response regulator [... 77 6e-13
ref|ZP_00512954.1| Response regulator receiver:ATP-binding ... 77 6e-13
ref|YP_444628.1| histidine kinase DhkJ [Salinibacter ruber ... 77 6e-13
ref|ZP_00108815.1| COG0642: Signal transduction histidine k... 77 6e-13
ref|ZP_01109674.1| sensory box histidine kinase/response re... 77 6e-13
gb|AAZ48079.1| Response regulator receiver:ATP-binding regi... 77 6e-13
ref|YP_434811.1| Signal transduction histidine kinase [Hahe... 77 6e-13
ref|ZP_00512843.1| PAS [Chlorobium limicola DSM 245] >gi|67... 77 6e-13
ref|ZP_00968742.1| COG0642: Signal transduction histidine k... 77 6e-13
ref|NP_902918.1| hypothetical protein CV3248 [Chromobacteri... 77 7e-13
ref|ZP_00911282.1| PAS [Clostridium beijerincki NCIMB 8052]... 77 7e-13
ref|ZP_00564531.1| Response regulator receiver:GAF:ATP-bind... 77 7e-13
dbj|BAB75460.1| two-component hybrid sensor and regulator [... 77 7e-13
emb|CAI85820.1| sensor protein barA [Pseudoalteromonas halo... 77 7e-13
ref|ZP_00586343.1| PAS [Shewanella amazonensis SB2B] >gi|68... 77 7e-13
gb|AAR30123.1| putative histidine kinase HHK6p [Gibberella ... 77 1e-12
gb|ABA74387.1| Multi-sensor Hybrid Histidine Kinase [Pseudo... 77 1e-12
ref|YP_201436.1| two-component system sensor protein [Xanth... 77 1e-12
gb|AAR35690.1| sensory box histidine kinase/response regula... 77 1e-12
gb|AAZ44999.1| Response regulator receiver:ATP-binding regi... 77 1e-12
ref|XP_759416.1| hypothetical protein UM03269.1 [Ustilago m... 77 1e-12
gb|ABA21187.1| Multi-sensor Hybrid Histidine Kinase [Anabae... 77 1e-12
gb|AAZ45693.1| Response regulator receiver:ATP-binding regi... 77 1e-12
gb|AAR30134.1| putative histidine kinase TCS1p [Gibberella ... 77 1e-12
ref|ZP_00905891.1| Response regulator receiver [Shewanella ... 77 1e-12
ref|NP_903173.1| probable sensor/response regulator hybrid ... 77 1e-12
ref|NP_182265.1| CKI1 (CYTOKININ-INDEPENDENT 1); protein hi... 77 1e-12
dbj|BAE69394.1| two-component system sensor protein [Xantho... 77 1e-12
ref|ZP_01016326.1| Hybrid sensory histidine kinase [Parvula... 77 1e-12
gb|ABC22833.1| PAS/PAC Sensor Hybrid Histidine Kinase [Rhod... 76 1e-12
ref|YP_235522.1| Response regulator receiver:GAF:ATP-bindin... 76 1e-12
gb|AAY92520.1| sensor histidine kinase/response regulator [... 76 1e-12
ref|NP_791607.1| sensor histidine kinase/response regulator... 76 1e-12
ref|ZP_01109020.1| putative sensor protein [Alteromonas mac... 76 1e-12
ref|ZP_00660379.1| Response regulator receiver:ATP-binding ... 76 1e-12
ref|NP_792518.1| sensor histidine kinase/response regulator... 76 1e-12
gb|AAZ35716.1| sensor histidine kinase/response regulator [... 76 1e-12
dbj|BAE52950.1| Signal transduction histidine kinase [Magne... 76 1e-12
ref|NP_745891.1| sensor histidine kinase/response regulator... 76 1e-12
ref|NP_794602.1| sensor histidine kinase/response regulator... 76 1e-12
ref|ZP_00898293.1| Response regulator receiver:GAF:ATP-bind... 76 1e-12
ref|YP_236682.1| Response regulator receiver:ATP-binding re... 76 1e-12
ref|ZP_00756171.1| COG0642: Signal transduction histidine k... 76 2e-12
ref|ZP_00745934.1| COG0642: Signal transduction histidine k... 76 2e-12
ref|YP_413373.1| multi-sensor hybrid histidine kinase [Nitr... 76 2e-12
ref|ZP_00474112.1| Response regulator receiver [Chromohalob... 76 2e-12
ref|ZP_00837289.1| PAS [Shewanella sp. PV-4] >gi|78360957|g... 76 2e-12
dbj|BAC08834.1| two-component hybrid sensor and regulator [... 76 2e-12
gb|AAG04317.1| sensor/response regulator hybrid [Pseudomona... 76 2e-12
gb|AAK24472.1| sensory box histidine kinase/response regula... 76 2e-12
ref|ZP_00317250.1| COG0642: Signal transduction histidine k... 75 2e-12
gb|AAT62380.1| sensor histidine kinase [Bacillus thuringien... 75 2e-12
ref|NP_746290.1| sensor histidine kinase/response regulator... 75 2e-12
ref|ZP_00638792.1| PAS [Shewanella frigidimarina NCIMB 400]... 75 2e-12
gb|AAK25181.1| sensor histidine kinase/response regulator [... 75 2e-12
ref|ZP_00550285.1| Histidine kinase [Desulfuromonas acetoxi... 75 2e-12
ref|ZP_01061081.1| PAS domain protein [Flavobacterium sp. M... 75 2e-12
ref|ZP_00308775.1| COG0642: Signal transduction histidine k... 75 2e-12
ref|YP_436385.1| Signal transduction histidine kinase [Hahe... 75 2e-12
dbj|BAC61352.1| putative two-component sensor [Vibrio parah... 75 2e-12
ref|ZP_00902080.1| Response regulator receiver:ATP-binding ... 75 2e-12
gb|AAZ54324.1| signal transduction histidine kinase [Thermo... 75 2e-12
ref|ZP_00849349.1| PAS [Shewanella sp. ANA-3] >gi|78507503|... 75 3e-12
gb|AAP07995.1| Two component system histidine kinase [Bacil... 75 3e-12
ref|ZP_00741459.1| Two component system histidine kinase [B... 75 3e-12
gb|ABA75716.1| Histidine Kinase [Pseudomonas fluorescens Pf... 75 3e-12
dbj|BAE50645.1| hypothetical protein [Magnetospirillum magn... 75 3e-12
ref|ZP_00107058.1| COG0784: FOG: CheY-like receiver [Nostoc... 75 3e-12
ref|NP_901249.1| probable two-component hybrid sensor and r... 75 3e-12
gb|AAF94507.1| sensory box sensor histidine kinase/response... 75 3e-12
ref|ZP_00753663.1| COG0642: Signal transduction histidine k... 75 3e-12
ref|ZP_00750537.1| COG0642: Signal transduction histidine k... 75 3e-12
gb|AAM90591.1| protein kinase PpoS [Marinomonas mediterranea] 75 3e-12
gb|ABB40731.1| response regulator receiver domain protein (... 75 3e-12
gb|AAZ47484.1| PAS [Dechloromonas aromatica RCB] >gi|719083... 75 4e-12
ref|XP_717946.1| putative response regulator protein [Candi... 75 4e-12
gb|AAG00916.1| hybrid histidine kinase [Dictyostelium disco... 75 4e-12
dbj|BAA24951.1| similar to sln1p of S. cerevisiae [Candida ... 75 4e-12
ref|ZP_01116725.1| GGDEF family protein [Reinekea sp. MED29... 75 4e-12
ref|ZP_01103333.1| two-component hybrid sensor and regulato... 75 4e-12
dbj|BAA17885.1| hybrid sensory kinase [Synechocystis sp. PC... 75 4e-12
ref|YP_236012.1| PAS [Pseudomonas syringae pv. syringae B72... 75 4e-12
ref|ZP_00503636.1| Response regulator receiver:GAF:ATP-bind... 75 4e-12
gb|AAK54092.2| histidine kinase DhkL [Dictyostelium discoid... 75 4e-12
ref|XP_639305.1| histidine kinase [Dictyostelium discoideum... 75 4e-12
emb|CAE78319.1| signal transduction histidine kinase [Bdell... 75 4e-12
gb|EAN29210.1| Response regulator receiver:ATP-binding regi... 75 4e-12
gb|AAR29894.1| putative histidine kinase HHK15p [Cochliobol... 75 4e-12
gb|AAU19345.1| sensor histidine kinase [Bacillus cereus E33... 74 5e-12
gb|AAA20829.1| pectate lyase 74 5e-12
ref|ZP_00236008.1| sensor histidine kinase/response regulat... 74 5e-12
ref|ZP_01101904.1| two-component system sensor histidine ki... 74 5e-12
ref|ZP_00974558.1| COG0642: Signal transduction histidine k... 74 5e-12
ref|ZP_01057118.1| cytoplasmic sensor hybrid histidine kina... 74 5e-12
gb|ABB32861.1| GAF sensor hybrid histidine kinase [Geobacte... 74 5e-12
dbj|BAE52819.1| Signal transduction histidine kinase [Magne... 74 5e-12
ref|ZP_00763227.1| COG0642: Signal transduction histidine k... 74 5e-12
ref|ZP_01132440.1| hypothetical protein PTD2_04516 [Pseudoa... 74 5e-12
gb|ABB37058.1| histidine kinase [Desulfovibrio desulfurican... 74 5e-12
gb|AAC47300.1| histidine kinase A 74 5e-12
ref|XP_640889.1| histidine kinase [Dictyostelium discoideum... 74 5e-12
ref|ZP_00585281.1| PAS [Shewanella amazonensis SB2B] >gi|68... 74 5e-12
ref|ZP_01148153.1| Response regulator receiver:ATP-binding ... 74 5e-12
gb|AAR34048.1| sensory box histidine kinase/response regula... 74 5e-12
ref|ZP_00806419.1| Response regulator receiver:ATP-binding ... 74 5e-12
gb|AAN48944.1| two-component hybrid sensor and regulator [L... 74 6e-12
gb|AAT30099.1| sensor histidine kinase/response regulator [... 74 6e-12
ref|ZP_00417465.1| Response regulator receiver:ATP-binding ... 74 6e-12
gb|ABA87031.1| putative histidine kinase [Vibrio cholerae] 74 6e-12
ref|ZP_00694884.1| Response regulator receiver:ATP-binding ... 74 6e-12
gb|AAS97739.1| sensory box histidine kinase/response regula... 74 6e-12
gb|AAQ18202.1| hypothetical protein csv012 [uncultured bact... 74 6e-12
ref|XP_758886.1| hypothetical protein UM02739.1 [Ustilago m... 74 6e-12
gb|EAN29352.1| PAS [Magnetococcus sp. MC-1] >gi|69256759|re... 74 6e-12
ref|YP_001993.1| response regulator [Leptospira interrogans... 74 6e-12
ref|NP_746929.1| sensor histidine kinase/response regulator... 74 6e-12
dbj|BAE66347.1| unnamed protein product [Aspergillus oryzae] 74 6e-12
ref|ZP_00418430.1| Response regulator receiver:ATP-binding ... 74 6e-12
emb|CAG69771.1| GacS-like sensor kinase protein [Acinetobac... 74 8e-12
ref|YP_432178.1| Signal transduction histidine kinase [Hahe... 74 8e-12
gb|AAZ46362.1| PAS [Dechloromonas aromatica RCB] >gi|719072... 74 8e-12
ref|ZP_00826632.1| COG0642: Signal transduction histidine k... 74 8e-12
ref|ZP_01052350.1| multi-sensor hybrid histidine kinase [Te... 74 8e-12
emb|CAD77336.1| histidine protein kinase homolog GacS [Rhod... 74 8e-12
gb|AAO09997.1| Signal transduction histidine kinase [Vibrio... 74 8e-12
dbj|BAC95587.1| signal transduction histidine kinase [Vibri... 74 8e-12
gb|AAO07892.1| FOG: CheY-like receiver [Vibrio vulnificus C... 74 8e-12
ref|ZP_00815127.1| PAS [Shewanella putrefaciens CN-32] >gi|... 74 8e-12
gb|AAO90597.1| sensory box sensor histidine kinase/response... 74 8e-12
dbj|BAC97498.1| sensory box sensor histidine kinase/respons... 74 8e-12
ref|NP_719006.1| sensor histidine kinase/response regulator... 73 1e-11
ref|ZP_00856275.1| Response regulator receiver:ATP-binding ... 73 1e-11
ref|ZP_00850586.1| Response regulator receiver:ATP-binding ... 73 1e-11
ref|ZP_00899666.1| Response regulator receiver:ATP-binding ... 73 1e-11
gb|AAZ46568.1| Response regulator receiver:ATP-binding regi... 73 1e-11
ref|ZP_00656782.1| PAS [Nocardioides sp. JS614] >gi|7115806... 73 1e-11
ref|ZP_00533227.1| Response regulator receiver [Chlorobium ... 73 1e-11
ref|ZP_01022469.1| Response regulator receiver:GAF:ATP-bind... 73 1e-11
ref|ZP_01003926.1| hypothetical protein SKA53_08146 [Loktan... 73 1e-11
gb|AAZ34474.1| response regulator, sensor histidine kinase ... 73 1e-11
ref|ZP_00835661.1| PAS [Shewanella sp. PV-4] >gi|78362382|g... 73 1e-11
gb|EAN28061.1| Response regulator receiver:ATP-binding regi... 73 1e-11
gb|AAG08241.1| probable sensor/response regulator hybrid [P... 73 1e-11
gb|AAV82565.1| Hybrid sensor histidine kinase (HisK, 2 CheY... 73 1e-11
ref|ZP_01185792.1| Response regulator receiver:GAF:ATP-bind... 73 1e-11
ref|ZP_01152331.1| Response regulator receiver:ATP-binding ... 73 1e-11
ref|YP_235102.1| Response regulator receiver:ATP-binding re... 73 1e-11
ref|YP_487569.1| PAS/PAC sensor hybrid histidine kinase [Rh... 73 1e-11
ref|ZP_00639374.1| PAS [Shewanella frigidimarina NCIMB 400]... 73 1e-11
emb|CAE77957.1| Sensory transduction histidine kinase [Bdel... 73 1e-11
ref|ZP_00524836.1| Response regulator receiver:GAF:ATP-bind... 73 1e-11
dbj|BAA17056.1| hybrid sensory kinase [Synechocystis sp. PC... 73 1e-11
dbj|BAB73978.1| two-component hybrid sensor and regulator [... 73 1e-11
ref|ZP_00347591.1| COG0642: Signal transduction histidine k... 73 1e-11
ref|ZP_00971552.1| COG0642: Signal transduction histidine k... 73 1e-11
ref|ZP_00583833.1| Response regulator receiver:ATP-binding ... 73 1e-11
emb|CAG36522.1| related to two-component system sensory/reg... 73 1e-11
ref|ZP_01170785.1| sensor histidine kinase [Bacillus sp. NR... 73 1e-11
ref|ZP_01114363.1| histidine kinase DhkJ [Reinekea sp. MED2... 72 2e-11
gb|EAN27825.1| Response regulator receiver:GAF:ATP-binding ... 72 2e-11
emb|CAB56474.1| putative histidine kinase [Pseudomonas stut... 72 2e-11
gb|AAZ47736.1| PAS [Dechloromonas aromatica RCB] >gi|719086... 72 2e-11
ref|NP_977413.1| sensor histidine kinase/response regulator... 72 2e-11
gb|AAL59700.1| putative histidine kinase [Vibrio cholerae] 72 2e-11
gb|EAN27045.1| Response regulator receiver:Hpt [Magnetococc... 72 2e-11
ref|NP_902168.1| probable hybrid sensory kinase [Chromobact... 72 2e-11
dbj|BAC08428.1| two-component hybrid sensor and regulator [... 72 2e-11
ref|ZP_00760913.1| COG0642: Signal transduction histidine k... 72 2e-11
emb|CAG22883.1| hypothetical protein [Photobacterium profun... 72 2e-11
ref|ZP_00533685.1| Response regulator receiver [Chlorobium ... 72 2e-11
ref|ZP_01115239.1| sensor protein LuxQ [Reinekea sp. MED297... 72 2e-11
gb|EAO25129.1| Response regulator receiver:ATP-binding regi... 72 2e-11
gb|AAR29885.1| putative histidine kinase HHK6p [Cochliobolu... 72 2e-11
gb|AAK25037.1| sensor histidine kinase/response regulator [... 72 2e-11
ref|ZP_00769449.1| Response regulator receiver:Hpt [Chlorof... 72 2e-11
ref|ZP_00419367.1| PAS [Azotobacter vinelandii AvOP] >gi|67... 72 2e-11
ref|ZP_00471763.1| Response regulator receiver:ATP-binding ... 72 2e-11
dbj|BAC96610.1| conserved hypothetical protein [Vibrio vuln... 72 2e-11
ref|ZP_00511975.1| PAS [Chlorobium limicola DSM 245] >gi|67... 72 2e-11
ref|ZP_00773511.1| PAS [Pseudoalteromonas atlantica T6c] >g... 72 2e-11
emb|CAG21933.1| putative BaeS, Signal transduction histidin... 72 2e-11
ref|ZP_01074551.1| Multi-sensor Hybrid Histidine Kinase [Ma... 72 2e-11
gb|EAN28525.1| Response regulator receiver:ATP-binding regi... 72 2e-11
gb|EAN29672.1| Response regulator receiver:ATP-binding regi... 72 2e-11
ref|ZP_01066086.1| probable composite two component regulat... 72 2e-11
ref|ZP_01113984.1| Signal transduction histidine kinase [Re... 72 2e-11
ref|ZP_01055843.1| putative sensory transduction histidine ... 72 3e-11
pir||B41863 two-component regulatory protein lemA - Pseudom... 72 3e-11
gb|ABB37334.1| histidine kinase [Desulfovibrio desulfurican... 72 3e-11
ref|ZP_01113337.1| PAS [Reinekea sp. MED297] >gi|88779426|g... 72 3e-11
gb|ABA03387.1| Signal transduction histidine kinase [Nitrob... 72 3e-11
gb|AAG05000.1| probable sensor/response regulator hybrid [P... 72 3e-11
ref|ZP_00347976.1| COG0642: Signal transduction histidine k... 72 3e-11
gb|EAN70525.1| PAS [Shewanella denitrificans OS217] >gi|699... 72 3e-11
gb|AAO07053.1| FOG: CheY-like receiver [Vibrio vulnificus C... 72 3e-11
dbj|BAE51734.1| Sensor protein barA [Magnetospirillum magne... 72 3e-11
gb|ABB40663.1| periplasmic sensor hybrid histidine kinase [... 72 3e-11
gb|ABB38321.1| histidine kinase [Desulfovibrio desulfurican... 72 3e-11
ref|XP_380913.1| hypothetical protein FG00737.1 [Gibberella... 72 3e-11
dbj|BAE49245.1| Signal transduction histidine kinase [Magne... 72 3e-11
sp|P48027|GACS_PSESY Sensor protein gacS >gi|151329|gb|AAA2... 72 3e-11
ref|YP_236768.1| Response regulator receiver:ATP-binding re... 72 3e-11
ref|NP_791516.1| sensor histidine kinase/response regulator... 71 4e-11
dbj|BAD01830.1| two-component hybrid sensor and regulator [... 71 4e-11
ref|NP_823688.1| two-component system sensor kinase [Strept... 71 4e-11
emb|CAA19849.1| putative sensory histidine kinase [Streptom... 71 4e-11
gb|EAN71793.1| PAS [Shewanella denitrificans OS217] >gi|699... 71 4e-11
dbj|BAC87974.1| two-component hybrid sensor and regulator [... 71 4e-11
ref|ZP_01135423.1| hypothetical tryptophan-rich sensor prot... 71 4e-11
gb|AAZ48600.1| PAS [Dechloromonas aromatica RCB] >gi|719094... 71 4e-11
ref|ZP_00859119.1| Response regulator receiver:ATP-binding ... 71 4e-11
emb|CAG35469.1| related to two-component system sensory/reg... 71 4e-11
gb|AAK24599.1| sensor histidine kinase/response regulator [... 71 4e-11
dbj|BAE49454.1| Predicted periplasmic ligand-binding sensor... 71 4e-11
ref|ZP_00512802.1| PAS [Chlorobium limicola DSM 245] >gi|67... 71 4e-11
ref|ZP_00533358.1| Response regulator receiver [Chlorobium ... 71 4e-11
ref|ZP_00903461.1| Response regulator receiver:ATP-binding ... 71 4e-11
gb|AAK54095.1| histidine kinase DhkK [Dictyostelium discoid... 71 4e-11
ref|XP_642392.1| histidine kinase [Dictyostelium discoideum... 71 4e-11
gb|EAN26968.1| Response regulator receiver:ATP-binding regi... 71 4e-11
gb|AAZ47517.1| Response regulator receiver:ATP-binding regi... 71 4e-11
gb|ABA75948.1| Periplasmic Sensor Hybrid Histidine Kinase [... 71 4e-11
gb|AAR30121.1| putative histidine kinase HHK16p [Gibberella... 71 4e-11
ref|ZP_00814520.1| Response regulator receiver:ATP-binding ... 71 4e-11
ref|ZP_00761785.1| COG0642: Signal transduction histidine k... 71 5e-11
ref|XP_635201.1| hypothetical protein DDB0183884 [Dictyoste... 71 5e-11
ref|ZP_00845884.1| PAS [Rhodopseudomonas palustris BisB18] ... 71 5e-11
emb|CAD37055.1| related to protein histidine kinase [Neuros... 71 5e-11
gb|ABB32651.1| Hpt sensor hybrid histidine kinase [Geobacte... 71 5e-11
gb|AAM18622.1| GacS-like sensor kinase protein [Acinetobact... 71 5e-11
ref|ZP_00587277.1| PAS [Shewanella amazonensis SB2B] >gi|68... 71 5e-11
ref|ZP_00883055.1| Response regulator receiver:ATP-binding ... 71 5e-11
gb|AAZ48188.1| Response regulator receiver:ATP-binding regi... 71 5e-11
gb|AAZ47621.1| Response regulator receiver:ATP-binding regi... 71 5e-11
gb|EAQ92278.1| hypothetical protein CHGG_00513 [Chaetomium ... 71 5e-11
gb|AAG07361.1| probable two-component sensor [Pseudomonas a... 71 5e-11
gb|ABB30326.1| histidine kinase [Geobacter metallireducens ... 71 5e-11
ref|ZP_00967597.1| COG0642: Signal transduction histidine k... 71 5e-11
ref|ZP_00973350.1| COG0642: Signal transduction histidine k... 71 5e-11
gb|AAK54094.2| histidine kinase DhkE [Dictyostelium discoid... 71 5e-11
ref|XP_645937.1| histidine kinase [Dictyostelium discoideum... 71 5e-11
gb|AAZ63425.1| PAS [Ralstonia eutropha JMP134] >gi|73537902... 71 5e-11
dbj|BAA17998.1| hybrid sensory kinase [Synechocystis sp. PC... 71 5e-11
ref|ZP_00820883.1| COG0642: Signal transduction histidine k... 71 5e-11
ref|ZP_00527745.1| PAS [Chlorobium phaeobacteroides DSM 266... 71 5e-11
ref|ZP_00416780.1| Response regulator receiver:ATP-binding ... 71 5e-11
ref|ZP_00205114.1| COG0642: Signal transduction histidine k... 71 5e-11
ref|ZP_00627039.1| PAS [Nitrobacter hamburgensis X14] >gi|6... 71 5e-11
ref|ZP_00991371.1| sensor histidine kinase/response regulat... 70 7e-11
gb|EAN08322.1| Response regulator receiver:GAF:ATP-binding ... 70 7e-11
gb|AAZ45177.1| PAS [Dechloromonas aromatica RCB] >gi|719060... 70 7e-11
gb|AAZ24849.1| sensor histidine kinase/response regulator [... 70 7e-11
ref|ZP_00528277.1| PAS [Chlorobium phaeobacteroides DSM 266... 70 7e-11
ref|ZP_00776355.1| Response regulator receiver:ATP-binding ... 70 7e-11
ref|YP_393310.1| response regulator receiver domain protein... 70 9e-11
ref|XP_644590.1| histidine kinase DhkI [Dictyostelium disco... 70 9e-11
>dbj|BAD01584.1| histidine kinase 2 [Zea mays]
Length = 1007
Score = 408 bits (1049), Expect(2) = e-143
Identities = 203/203 (100%), Positives = 203/203 (100%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG
Sbjct: 790 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 849
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD
Sbjct: 850 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 909
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA
Sbjct: 910 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 969
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THEQCLKSEMDGYVSKPFEGEQL
Sbjct: 970 THEQCLKSEMDGYVSKPFEGEQL 992
Score = 123 bits (308), Expect(2) = e-143
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN
Sbjct: 728 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 787
>ref|XP_463649.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
Length = 1023
Score = 360 bits (925), Expect(2) = e-120
Identities = 177/203 (87%), Positives = 191/203 (94%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
+PDS KLFLL + SS K S RE+NLNVIMKPLRASMLQVSL+RALGG+DK+HCRNG
Sbjct: 806 KPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNG 865
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKK+IIVVDDNIVNLKVAAGALKKYGAEVTCADSGK+AITLLKPPHNFD
Sbjct: 866 VVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKKAITLLKPPHNFD 925
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEAT+RIRVMERDLNE+IERGEAPPEC +++WRTPILAMTADVIQA
Sbjct: 926 ACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQA 985
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THE+CLKSEMDGYVSKPFEGEQL
Sbjct: 986 THEECLKSEMDGYVSKPFEGEQL 1008
Score = 96.7 bits (239), Expect(2) = e-120
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGV+TELT +L+Q+ISK N GS AKLVLIDKETWLKESH PLLV KLRN
Sbjct: 744 KVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNKLRN 803
>gb|ABB76249.1| hybrid type histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 1023
Score = 360 bits (925), Expect(2) = e-120
Identities = 177/203 (87%), Positives = 191/203 (94%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
+PDS KLFLL + SS K S RE+NLNVIMKPLRASMLQVSL+RALGG+DK+HCRNG
Sbjct: 806 KPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNG 865
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKK+IIVVDDNIVNLKVAAGALKKYGAEVTCADSGK+AITLLKPPHNFD
Sbjct: 866 VVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKKAITLLKPPHNFD 925
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEAT+RIRVMERDLNE+IERGEAPPEC +++WRTPILAMTADVIQA
Sbjct: 926 ACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQA 985
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THE+CLKSEMDGYVSKPFEGEQL
Sbjct: 986 THEECLKSEMDGYVSKPFEGEQL 1008
Score = 96.7 bits (239), Expect(2) = e-120
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGV+TELT +L+Q+ISK N GS AKLVLIDKETWLKESH PLLV KLRN
Sbjct: 744 KVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNKLRN 803
>dbj|BAD88327.1| putative histidine kinase 2 [Oryza sativa (japonica cultivar-group)]
dbj|BAD88305.1| putative histidine kinase 2 [Oryza sativa (japonica cultivar-group)]
Length = 866
Score = 360 bits (925), Expect(2) = e-120
Identities = 177/203 (87%), Positives = 191/203 (94%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
+PDS KLFLL + SS K S RE+NLNVIMKPLRASMLQVSL+RALGG+DK+HCRNG
Sbjct: 649 KPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNG 708
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKK+IIVVDDNIVNLKVAAGALKKYGAEVTCADSGK+AITLLKPPHNFD
Sbjct: 709 VVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKKAITLLKPPHNFD 768
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEAT+RIRVMERDLNE+IERGEAPPEC +++WRTPILAMTADVIQA
Sbjct: 769 ACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQA 828
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THE+CLKSEMDGYVSKPFEGEQL
Sbjct: 829 THEECLKSEMDGYVSKPFEGEQL 851
Score = 96.7 bits (239), Expect(2) = e-120
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGV+TELT +L+Q+ISK N GS AKLVLIDKETWLKESH PLLV KLRN
Sbjct: 587 KVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNKLRN 646
>gb|AAO59549.1| histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 497
Score = 360 bits (925), Expect(2) = e-120
Identities = 177/203 (87%), Positives = 191/203 (94%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
+PDS KLFLL + SS K S RE+NLNVIMKPLRASMLQVSL+RALGG+DK+HCRNG
Sbjct: 280 KPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNG 339
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKK+IIVVDDNIVNLKVAAGALKKYGAEVTCADSGK+AITLLKPPHNFD
Sbjct: 340 VVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKKAITLLKPPHNFD 399
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEAT+RIRVMERDLNE+IERGEAPPEC +++WRTPILAMTADVIQA
Sbjct: 400 ACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQA 459
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THE+CLKSEMDGYVSKPFEGEQL
Sbjct: 460 THEECLKSEMDGYVSKPFEGEQL 482
Score = 96.7 bits (239), Expect(2) = e-120
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGV+TELT +L+Q+ISK N GS AKLVLIDKETWLKESH PLLV KLRN
Sbjct: 218 KVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNKLRN 277
>gb|AAO59548.1| histidine kinase [Oryza sativa (indica cultivar-group)]
Length = 488
Score = 360 bits (925), Expect(2) = e-120
Identities = 177/203 (87%), Positives = 191/203 (94%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
+PDS KLFLL + SS K S RE+NLNVIMKPLRASMLQVSL+RALGG+DK+HCRNG
Sbjct: 271 KPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNG 330
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
VVGNSTLGSLLHKK+IIVVDDNIVNLKVAAGALKKYGAEVTCADSGK+AITLLKPPHNFD
Sbjct: 331 VVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKKAITLLKPPHNFD 390
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEAT+RIRVMERDLNE+IERGEAPPEC +++WRTPILAMTADVIQA
Sbjct: 391 ACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQA 450
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
THE+CLKSEMDGYVSKPFEGEQL
Sbjct: 451 THEECLKSEMDGYVSKPFEGEQL 473
Score = 96.7 bits (239), Expect(2) = e-120
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
KVTKYHLQRLGV+TELT +L+Q+ISK N GS AKLVLIDKETWLKESH PLLV KLRN
Sbjct: 209 KVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNKLRN 268
>ref|NP_564276.1| AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Arabidopsis thaliana]
dbj|BAB40775.1| histidine kinase [Arabidopsis thaliana]
Length = 1036
Score = 212 bits (539), Expect(2) = 7e-59
Identities = 122/202 (60%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Frame = -3
Query: 601 STKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALG-GIDKLHCRNGVV 425
S KL LL N S S + VI+KPLRASML +LQR LG GI + G
Sbjct: 820 SPKLILLANSVESSISEALCTGIDPPIVIVKPLRASMLAATLQRGLGIGIREPPQHKGPP 879
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
L +LL ++I++VDDN VNL+VAAGALKKYGA+V CA+SG +AI+LLKPPH FDAC
Sbjct: 880 A-LILRNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIKAISLLKPPHEFDAC 938
Query: 244 FMDIQMPEMDGFEATKRIRVMERDLNEQIERGEA-PPECVGVRQWRTPILAMTADVIQAT 68
FMDIQMPEMDGFEAT+RIR ME ++N++I+ GEA E W P+LAMTADVIQAT
Sbjct: 939 FMDIQMPEMDGFEATRRIRDMEEEMNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQAT 998
Query: 67 HEQCLKSEMDGYVSKPFEGEQL 2
HE+CLK MDGYVSKPFE EQL
Sbjct: 999 HEECLKCGMDGYVSKPFEAEQL 1020
Score = 39.7 bits (91), Expect(2) = 7e-59
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKES 654
KV+ YH QRLG++ E+ ++Q + G+ ++LI++E W +E+
Sbjct: 758 KVSWYHFQRLGIRVEVVPRVEQALHYLKIGTTTVNMILIEQEIWNREA 805
>ref|NP_568532.1| AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) [Arabidopsis thaliana]
dbj|BAB40774.1| histidine kinase [Arabidopsis thaliana]
Length = 1176
Score = 202 bits (513), Expect(2) = 1e-54
Identities = 113/204 (55%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Frame = -3
Query: 595 KLFLLENP-----KSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
K+FLL +S +KS I V++KPLR S+L LQ L K R
Sbjct: 970 KIFLLATSATLTERSEMKSTGLIDE-----VVIKPLRMSVLICCLQETLVNGKK---RQP 1021
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
LG LL +K+I+VVDDN+VN +VA GALKKYGA VTC +SGK A+ +LKPPHNFD
Sbjct: 1022 NRQRRNLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFD 1081
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPEC-VGVRQWRTPILAMTADVIQ 74
ACFMD+QMPEMDGFEAT+R+R +ER++N++I GE E W PILAMTADVIQ
Sbjct: 1082 ACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMTADVIQ 1141
Query: 73 ATHEQCLKSEMDGYVSKPFEGEQL 2
ATHE+C+K MDGYVSKPFE E L
Sbjct: 1142 ATHEECMKCGMDGYVSKPFEEEVL 1165
Score = 35.4 bits (80), Expect(2) = 1e-54
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKL-----VLIDKETWLKESHSM 645
+VT+Y L+RLG+ ++ + L + C I+KL +LIDK+ W KE S+
Sbjct: 903 EVTRYELRRLGISADIVSSL-----RMACTCCISKLENLAMILIDKDAWNKEEFSV 953
>dbj|BAB09274.1| histidine kinase-like protein [Arabidopsis thaliana]
Length = 1173
Score = 202 bits (513), Expect(2) = 1e-54
Identities = 113/204 (55%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Frame = -3
Query: 595 KLFLLENP-----KSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
K+FLL +S +KS I V++KPLR S+L LQ L K R
Sbjct: 967 KIFLLATSATLTERSEMKSTGLIDE-----VVIKPLRMSVLICCLQETLVNGKK---RQP 1018
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
LG LL +K+I+VVDDN+VN +VA GALKKYGA VTC +SGK A+ +LKPPHNFD
Sbjct: 1019 NRQRRNLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFD 1078
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPEC-VGVRQWRTPILAMTADVIQ 74
ACFMD+QMPEMDGFEAT+R+R +ER++N++I GE E W PILAMTADVIQ
Sbjct: 1079 ACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMTADVIQ 1138
Query: 73 ATHEQCLKSEMDGYVSKPFEGEQL 2
ATHE+C+K MDGYVSKPFE E L
Sbjct: 1139 ATHEECMKCGMDGYVSKPFEEEVL 1162
Score = 35.4 bits (80), Expect(2) = 1e-54
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKL-----VLIDKETWLKESHSM 645
+VT+Y L+RLG+ ++ + L + C I+KL +LIDK+ W KE S+
Sbjct: 900 EVTRYELRRLGISADIVSSL-----RMACTCCISKLENLAMILIDKDAWNKEEFSV 950
>gb|AAP37766.1| At5g35750 [Arabidopsis thaliana]
gb|AAO00890.1| histidine kinase-like protein [Arabidopsis thaliana]
Length = 652
Score = 202 bits (513), Expect(2) = 1e-54
Identities = 113/204 (55%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Frame = -3
Query: 595 KLFLLENP-----KSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
K+FLL +S +KS I V++KPLR S+L LQ L K R
Sbjct: 446 KIFLLATSATLTERSEMKSTGLIDE-----VVIKPLRMSVLICCLQETLVNGKK---RQP 497
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
LG LL +K+I+VVDDN+VN +VA GALKKYGA VTC +SGK A+ +LKPPHNFD
Sbjct: 498 NRQRRNLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFD 557
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPEC-VGVRQWRTPILAMTADVIQ 74
ACFMD+QMPEMDGFEAT+R+R +ER++N++I GE E W PILAMTADVIQ
Sbjct: 558 ACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMTADVIQ 617
Query: 73 ATHEQCLKSEMDGYVSKPFEGEQL 2
ATHE+C+K MDGYVSKPFE E L
Sbjct: 618 ATHEECMKCGMDGYVSKPFEEEVL 641
Score = 35.4 bits (80), Expect(2) = 1e-54
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKL-----VLIDKETWLKESHSM 645
+VT+Y L+RLG+ ++ + L + C I+KL +LIDK+ W KE S+
Sbjct: 379 EVTRYELRRLGISADIVSSL-----RMACTCCISKLENLAMILIDKDAWNKEEFSV 429
>gb|AAF99730.1| F17L21.11 [Arabidopsis thaliana]
Length = 1092
Score = 194 bits (494), Expect(2) = 1e-53
Identities = 113/192 (58%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Frame = -3
Query: 601 STKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALG-GIDKLHCRNGVV 425
S KL LL N S S + VI+KPLRASML +LQR LG GI + G
Sbjct: 852 SPKLILLANSVESSISEALCTGIDPPIVIVKPLRASMLAATLQRGLGIGIREPPQHKGPP 911
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
L +LL ++I++VDDN VNL+VAAGALKKYGA+V CA+SG +AI+LLKPPH FDAC
Sbjct: 912 A-LILRNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIKAISLLKPPHEFDAC 970
Query: 244 FMDIQMPEMDGFEATKRIRVMERDLNEQIERGEA-PPECVGVRQWRTPILAMTADVIQAT 68
FMDIQMPEMDGFEAT+RIR ME ++N++I+ GEA E W P+LAMTADVIQAT
Sbjct: 971 FMDIQMPEMDGFEATRRIRDMEEEMNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQAT 1030
Query: 67 HEQCLKSEMDGY 32
HE+CLK MDGY
Sbjct: 1031 HEECLKCGMDGY 1042
Score = 39.7 bits (91), Expect(2) = 1e-53
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKES 654
KV+ YH QRLG++ E+ ++Q + G+ ++LI++E W +E+
Sbjct: 790 KVSWYHFQRLGIRVEVVPRVEQALHYLKIGTTTVNMILIEQEIWNREA 837
>gb|AAM14700.1| cytokinin receptor [Catharanthus roseus]
Length = 1041
Score = 195 bits (496), Expect(2) = 2e-51
Identities = 112/205 (54%), Positives = 141/205 (68%), Gaps = 7/205 (3%)
Frame = -3
Query: 595 KLFLLENPKS-----SVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALG-GIDKLHCRN 434
K+FLL NPKS +KS + NV+ KPLR S+L LQ ++G G + R+
Sbjct: 834 KIFLLANPKSFSDCIELKSTGLVD-----NVLTKPLRLSILISCLQESIGFGRTRQVTRS 888
Query: 433 GVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNF 254
ST+G+LL KR++VVDDN VN KVA AL+KYGA VTC SG+ A+ LKPPH+F
Sbjct: 889 NP---STIGNLLKGKRMLVVDDNPVNRKVAELALRKYGAVVTCEASGEAALQRLKPPHDF 945
Query: 253 DACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGE-APPECVGVRQWRTPILAMTADVI 77
DACFMD+QMPEMDGFEAT++IR +ER+ NE ++ GE + W TPILAMTAD+I
Sbjct: 946 DACFMDLQMPEMDGFEATQKIRHLEREYNENVKSGEIGTDKSTDEAYWHTPILAMTADLI 1005
Query: 76 QATHEQCLKSEMDGYVSKPFEGEQL 2
QAT+E+C K MDGYVSKPF+ EQL
Sbjct: 1006 QATNEKCRKCGMDGYVSKPFDDEQL 1030
Score = 31.6 bits (70), Expect(2) = 2e-51
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISK-----NNCGSQIAKLVLIDKETWLKE 657
+VT+Y L+RL V ++ + ++ S N+ S+ +VLID+++W E
Sbjct: 757 EVTRYQLKRLEVSVDIASTVEAAYSHLSADVNSSASERVSMVLIDEDSWDNE 808
>ref|XP_469566.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAO38834.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
Length = 1013
Score = 193 bits (490), Expect(2) = 3e-51
Identities = 110/206 (53%), Positives = 134/206 (65%), Gaps = 8/206 (3%)
Frame = -3
Query: 595 KLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCR------- 437
K+FLL +S H +VI KPL+AS L L +ALG H +
Sbjct: 798 KVFLLSAAESDKVKKIHAVD----SVIPKPLKASALAACLFQALGITQPSHEKRDDSGSL 853
Query: 436 NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN 257
+G G+ +L LL K I+VVDDN VNL+VAAG LKKYGA+V C +SGK+A++LL+ PH
Sbjct: 854 HGRDGSGSLHGLLLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALSLLQVPHK 913
Query: 256 FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVG-VRQWRTPILAMTADV 80
FD C MDIQMPEMDGFEAT++IR ME NEQ + E+ E +W PILAMTADV
Sbjct: 914 FDLCLMDIQMPEMDGFEATRQIRAMEGKANEQADDSESGSEIAAKTAKWHLPILAMTADV 973
Query: 79 IQATHEQCLKSEMDGYVSKPFEGEQL 2
IQATHE+C K MDGYVSKPFE +QL
Sbjct: 974 IQATHEECTKCGMDGYVSKPFEEKQL 999
Score = 32.7 bits (73), Expect(2) = 3e-51
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Frame = -2
Query: 794 VTKYHLQRLGVQTELTTDLDQYI---------SKNNCGSQIAKLVLIDKETW 666
VTKYHLQRLG+ +E+ +D S + G + ++LI+ ++W
Sbjct: 721 VTKYHLQRLGITSEVVGTIDPTFGVLSGRNGSSLTSIGKKQPCMLLIESDSW 772
>emb|CAC09578.1| histidine kinase receptor [Fagus sylvatica]
Length = 247
Score = 167 bits (423), Expect(2) = 6e-50
Identities = 90/154 (58%), Positives = 111/154 (72%)
Frame = -3
Query: 595 KLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNS 416
KLFLL N SS ++N+ ++ MKPLRASML SLQRA+G K + RN + +
Sbjct: 75 KLFLLANSISSSRTNAATSGGFSPYTTMKPLRASMLAASLQRAMGVGSKGNLRNRELPSL 134
Query: 415 TLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
+L SL ++I+++DDN VNLKVAAGALKKYGA+V CA+S +AI LKPPH FDACFMD
Sbjct: 135 SLRSLPRGRKILIIDDNNVNLKVAAGALKKYGADVVCAESRIKAIEFLKPPHRFDACFMD 194
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPE 134
IQMPEMDGFEAT++IR ME N +I RGEA E
Sbjct: 195 IQMPEMDGFEATRKIRDMEHCFNNRIRRGEASVE 228
Score = 54.3 bits (129), Expect(2) = 6e-50
Identities = 21/61 (34%), Positives = 42/61 (68%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
K+++YH+QRLG+ E+ +DL+Q SK + G+++ +VL+++E W +++H + L+
Sbjct: 8 KMSRYHIQRLGISVEVVSDLNQGWSKISSGNKVVDMVLVEQEVWDRDTHISASFIINLKK 67
Query: 617 I 615
I
Sbjct: 68 I 68
>emb|CAF31355.1| putative histidine kinase [Cucurbita maxima]
Length = 981
Score = 185 bits (470), Expect(2) = 7e-48
Identities = 104/176 (59%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
VIMKPLRA+M+ LQ+ LG ++ G++ L SLL KRI++VDDN VN +VAA
Sbjct: 809 VIMKPLRATMVAACLQQVLGVKNQRRPN----GSAFLQSLLCGKRILIVDDNRVNRRVAA 864
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE- 164
GALKK+GA+V CADSGK A+ LL+ PHNFDACFMDIQMPEMDGFEAT+RIR ME + N+
Sbjct: 865 GALKKFGADVECADSGKSALKLLQLPHNFDACFMDIQMPEMDGFEATRRIRTMEVEANKG 924
Query: 163 --QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
G+ P PILAMTADVI AT+E+CLK M+GYVSKPFE E L
Sbjct: 925 GLSATEGKRP----------IPILAMTADVIHATYEECLKCGMNGYVSKPFEEENL 970
Score = 29.3 bits (64), Expect(2) = 7e-48
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 23/95 (24%)
Frame = -2
Query: 794 VTKYHLQRLGVQTELTTDLDQYISK-NNCGSQIAK------LVLIDKE------------ 672
VT+YHL+RLG+ E+T ++ S GS + + ++L++K+
Sbjct: 710 VTRYHLKRLGIIVEVTNSINMAASLFRENGSTLPRNTILPDMILVEKDILNSDEECGIIH 769
Query: 671 --TWLKESHSM--PLLVTKLRNIVSARLYKVISFG 579
W S+ P L+ NI +A L K + G
Sbjct: 770 HLNWKPNGSSVKFPKLILLATNIATAELDKARAAG 804
>dbj|BAD01586.1| histidine kinase 3 [Zea mays]
Length = 1049
Score = 189 bits (481), Expect = 8e-47
Identities = 100/174 (57%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG-GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
I KPLR S + L++ LG G+ + R+ + L S+L K+I+VVDDN VN KVAA
Sbjct: 865 IRKPLRLSTIVACLRKTLGVGVTRQQSRDQSL---VLQSVLTGKQILVVDDNAVNRKVAA 921
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
G+LKKYG+ VTC DSG +AI +LKPPH FDACFMD+QMPEMDGFEAT+ IR +E+ +N+
Sbjct: 922 GSLKKYGSTVTCVDSGSDAIDMLKPPHTFDACFMDVQMPEMDGFEATRLIRSIEKKINDM 981
Query: 160 IERGEAPPECVGVR-QWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
I GE G + W PILAMTADVIQAT E+C++ MDGYVSKPFE +QL
Sbjct: 982 IMMGEISANNYGNKAHWHVPILAMTADVIQATFEKCMQCGMDGYVSKPFEEQQL 1035
>dbj|BAD01585.1| histidine kinase 3 [Zea mays]
Length = 1201
Score = 189 bits (481), Expect = 8e-47
Identities = 100/174 (57%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG-GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
I KPLR S + L++ LG G+ + R+ + L S+L K+I+VVDDN VN KVAA
Sbjct: 1017 IRKPLRLSTIVACLRKTLGVGVTRQQSRDQSL---VLQSVLTGKQILVVDDNAVNRKVAA 1073
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
G+LKKYG+ VTC DSG +AI +LKPPH FDACFMD+QMPEMDGFEAT+ IR +E+ +N+
Sbjct: 1074 GSLKKYGSTVTCVDSGSDAIDMLKPPHTFDACFMDVQMPEMDGFEATRLIRSIEKKINDM 1133
Query: 160 IERGEAPPECVGVR-QWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
I GE G + W PILAMTADVIQAT E+C++ MDGYVSKPFE +QL
Sbjct: 1134 IMMGEISANNYGNKAHWHVPILAMTADVIQATFEKCMQCGMDGYVSKPFEEQQL 1187
>ref|NP_565277.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
ref|NP_973396.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
emb|CAC18523.1| putative histidine kinase receptor [Arabidopsis thaliana]
emb|CAC18522.1| putative histidine kinase receptor [Arabidopsis thaliana]
emb|CAC18521.1| putative histidine kinase receptor [Arabidopsis thaliana]
gb|AAD21777.2| putative histidine kinase [Arabidopsis thaliana]
gb|ABB83397.1| AtCRE1a [Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP]
gb|ABB83393.1| AtCRE1a [Receiver Vector p415-CYC1-CRE1a-SSRE-GFP]
Length = 1057
Score = 188 bits (477), Expect = 2e-46
Identities = 102/173 (58%), Positives = 123/173 (71%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
VIMKPLRASM+ LQ+ L +TL SLL K+I+VVDDNIVN +VAA
Sbjct: 879 VIMKPLRASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAA 938
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
GALKK+GAEV CA+SG+ A+ LL+ PH FDACFMDIQMP+MDGFEAT++IR+ME++ E+
Sbjct: 939 GALKKFGAEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK 998
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+W PILAMTADVI AT+E+CLKS MDGYVSKPFE E L
Sbjct: 999 TN-----------LEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1040
>dbj|BAB33310.1| cytokinin receptor CRE1a [Arabidopsis thaliana]
Length = 1057
Score = 188 bits (477), Expect = 2e-46
Identities = 102/173 (58%), Positives = 123/173 (71%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
VIMKPLRASM+ LQ+ L +TL SLL K+I+VVDDNIVN +VAA
Sbjct: 879 VIMKPLRASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAA 938
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
GALKK+GAEV CA+SG+ A+ LL+ PH FDACFMDIQMP+MDGFEAT++IR+ME++ E+
Sbjct: 939 GALKKFGAEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKEAKEK 998
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+W PILAMTADVI AT+E+CLKS MDGYVSKPFE E L
Sbjct: 999 TN-----------LEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1040
>ref|NP_849925.1| WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana]
dbj|BAB40776.1| histidine kinase [Arabidopsis thaliana]
Length = 1080
Score = 188 bits (477), Expect = 2e-46
Identities = 102/173 (58%), Positives = 123/173 (71%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
VIMKPLRASM+ LQ+ L +TL SLL K+I+VVDDNIVN +VAA
Sbjct: 902 VIMKPLRASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAA 961
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
GALKK+GAEV CA+SG+ A+ LL+ PH FDACFMDIQMP+MDGFEAT++IR+ME++ E+
Sbjct: 962 GALKKFGAEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK 1021
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+W PILAMTADVI AT+E+CLKS MDGYVSKPFE E L
Sbjct: 1022 TN-----------LEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1063
>dbj|BAB33311.1| cytokinin receptor CRE1b [Arabidopsis thaliana]
Length = 1080
Score = 188 bits (477), Expect = 2e-46
Identities = 102/173 (58%), Positives = 123/173 (71%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
VIMKPLRASM+ LQ+ L +TL SLL K+I+VVDDNIVN +VAA
Sbjct: 902 VIMKPLRASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAA 961
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
GALKK+GAEV CA+SG+ A+ LL+ PH FDACFMDIQMP+MDGFEAT++IR+ME++ E+
Sbjct: 962 GALKKFGAEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKEAKEK 1021
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+W PILAMTADVI AT+E+CLKS MDGYVSKPFE E L
Sbjct: 1022 TN-----------LEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1063
>dbj|BAB20583.1| histidine kinase 1 [Zea mays]
Length = 974
Score = 187 bits (476), Expect = 3e-46
Identities = 100/173 (57%), Positives = 127/173 (73%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
V+ KP+RAS + S+Q+ L ++ ++ S L SLL K I+VVDDN VNL+VAA
Sbjct: 787 VMCKPIRASTIASSIQQLLK-VEIAERKDNQNRPSFLRSLLVGKNILVVDDNKVNLRVAA 845
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
ALKKYGA V+C +SGK+AI+LL+PPH FDACFMD+QMPEMDGFEAT +IR ME NE+
Sbjct: 846 AALKKYGANVSCVESGKDAISLLQPPHRFDACFMDVQMPEMDGFEATGQIRQMELKANEE 905
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ A E ++ P+LAMTADVIQAT+E+C+KS MDGYVSKPF+ EQL
Sbjct: 906 RKNKLASIEGSTTAEYHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQL 958
>dbj|BAE80686.1| histidine kinase [Zea mays]
Length = 975
Score = 186 bits (472), Expect = 9e-46
Identities = 100/173 (57%), Positives = 128/173 (73%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
V+ KP+RASM+ S+Q+ L ++ R+ S L SLL K I+VVDDN VNL+VAA
Sbjct: 788 VMCKPIRASMIASSIQQLLK-VEMPERRDNQNRPSFLRSLLVGKNILVVDDNKVNLRVAA 846
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
ALKKYGA V+C +SGK+AI+LL+PPH FDACFMD+QMPEMDGFEAT++IR E +NE+
Sbjct: 847 AALKKYGANVSCVESGKDAISLLQPPHCFDACFMDVQMPEMDGFEATRQIRQTEMRVNEE 906
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ E ++ P+LAMTADVIQAT+E+C+KS MDGYVSKPF+ EQL
Sbjct: 907 RKNKLVLIEGSTFVEYHLPVLAMTADVIQATYEKCIKSGMDGYVSKPFDEEQL 959
>gb|AAK13126.1| Histidine-kinase like protein [Oryza sativa (japonica
cultivar-group)]
Length = 627
Score = 166 bits (420), Expect(2) = 3e-45
Identities = 103/198 (52%), Positives = 124/198 (62%), Gaps = 3/198 (1%)
Frame = -3
Query: 646 CLFWLLN*GTLYQPDST-KLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQR 470
CL L GTL + K FLL + S+ Y+ N I KPLR S + L +
Sbjct: 280 CLIDLRLKGTLKSWQTMPKFFLLAGSITPADSDCLRLAGYS-NSIRKPLRLSTVAACLSK 338
Query: 469 ALG-GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSG 293
ALG G+ R+ + L S+L K I+VVDDN VN VAAGALKKYGA VTC DSG
Sbjct: 339 ALGVGLTGRRSRDNSL---VLRSVLTGKNILVVDDNAVNRIVAAGALKKYGAIVTCVDSG 395
Query: 292 KEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVR-Q 116
KEAI+ L+PPH FDACFMD+QMPEMDGFEAT+ +R +E +N+ I+ GE E G +
Sbjct: 396 KEAISRLQPPHKFDACFMDVQMPEMDGFEATRLVRSVESKINDTIQAGEVSSEIYGNKAH 455
Query: 115 WRTPILAMTADVIQATHE 62
W PILAMTADVIQAT E
Sbjct: 456 WHVPILAMTADVIQATFE 473
Score = 39.7 bits (91), Expect(2) = 3e-45
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISK--NNCGSQI---AKLVLIDKETWLKES 654
+VT YHL+RLG+Q +L + +S +C S + +VL+DKE W ++S
Sbjct: 221 EVTMYHLRRLGIQCDLAATSESALSALLESCNSSVKSSLNMVLVDKEAWGEDS 273
>ref|XP_467688.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD16039.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
Length = 984
Score = 173 bits (439), Expect(2) = 2e-43
Identities = 96/173 (55%), Positives = 123/173 (71%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
V+ KP+RAS + LQ+ L + ++ S L SLL K I++VDDN VNL+VAA
Sbjct: 798 VMYKPIRASTIASCLQQLLKVVMPER-KDNQNRPSFLRSLLIGKNILIVDDNKVNLRVAA 856
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
ALKKYGA+V C +SGK+A++LL+ PH FDACFMD+QMPEMDGFEAT++IR ME NE+
Sbjct: 857 AALKKYGAKVHCVESGKDAVSLLQQPHCFDACFMDVQMPEMDGFEATRQIRQMEVKANEE 916
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ + V P+LAMTADVIQAT+E+C+KS MDGYVSKPF+ EQL
Sbjct: 917 RKALDLMEGSTFVES-HLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQL 968
Score = 26.2 bits (56), Expect(2) = 2e-43
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = -2
Query: 794 VTKYHLQRLGVQTELTTDLDQYI----SKNNCGSQIAKL--VLIDKETWLKESHSMPLLV 633
VT+YHL RLG+ ++ +L + +N KL + I+ + W E+ LL+
Sbjct: 703 VTRYHLNRLGIVVKVVNNLSMGLQTLAGQNGVKESREKLSMLFIESDIWRPETDI--LLL 760
Query: 632 TKLRNI 615
+L +
Sbjct: 761 NRLHEL 766
>gb|ABD49494.1| cytokinin receptor 1 [Physcomitrella patens]
Length = 1075
Score = 177 bits (450), Expect = 3e-43
Identities = 99/175 (56%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVV--GNSTLGSLLHKKRIIVVDDNIVNLKV 347
V+ KPLRAS++ L++ LG D+ + + G ++L +LL+ KRI+VVDDN VN KV
Sbjct: 892 VVRKPLRASLIAACLKQILGVGDRSRDQEQELRSGVTSLQTLLYGKRILVVDDNPVNRKV 951
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
AAGAL KYGA+V C SG+ AI LKPPHNFDACFMD+QMPEMDGFEAT IR E
Sbjct: 952 AAGALHKYGAQVECVYSGRAAIQKLKPPHNFDACFMDVQMPEMDGFEATGLIRKAEA--- 1008
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
ERG+A R+ PILAMTADVIQAT E+C++ MDGYV+KPF+ QL
Sbjct: 1009 AAAERGQAAGLPTFKRRLHVPILAMTADVIQATSEECMRCGMDGYVAKPFDEHQL 1063
>dbj|BAE80689.1| histidine kinase [Zea mays]
Length = 996
Score = 173 bits (439), Expect = 6e-42
Identities = 99/177 (55%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
+VI KPL+AS L L + LG + R+ G+ L LL K I+VVDDN VNL+VA
Sbjct: 809 SVITKPLKASALAACLFQTLGIKQSSNERSDNSGS--LYGLLLGKNILVVDDNKVNLRVA 866
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
AG LKK+GA+V C +SGK+A+ LL P+ F C MDIQMPEMDGFEATK+IR ME NE
Sbjct: 867 AGTLKKFGAKVECVESGKDALALLHVPYKFHLCLMDIQMPEMDGFEATKQIRAMEAKANE 926
Query: 163 QIERGEAPPECVG---VRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
Q + E G +WR P+LAMTADVIQATHE+C K MDGYV+KPFE +QL
Sbjct: 927 QAVACD-DSEIDGTTRAARWRLPVLAMTADVIQATHEECTKCGMDGYVTKPFEEKQL 982
>dbj|BAE80688.1| histidine kinase [Zea mays]
Length = 995
Score = 173 bits (438), Expect = 8e-42
Identities = 97/176 (55%), Positives = 117/176 (66%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
+VI KPL+AS L L + LG + R G+ L LL K I+VVDDN VNL+VA
Sbjct: 808 SVITKPLKASGLAACLFQTLGITQSSNERRDNSGS--LHGLLLGKNILVVDDNKVNLRVA 865
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
AG LKK+GA+V C +SGK+A+ L+ PH F C MDIQMPEMDGFEATK+IR ME NE
Sbjct: 866 AGTLKKFGAKVECVESGKDALASLQVPHKFHLCLMDIQMPEMDGFEATKQIRAMEAKANE 925
Query: 163 QIERGEAPPECVGVR--QWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
Q + R +W P+LAMTADVIQATHE+C K MDGYV+KPFE +QL
Sbjct: 926 QAVACDDSDTDGATRAARWHLPVLAMTADVIQATHEECTKYGMDGYVTKPFEEKQL 981
>dbj|BAE80687.1| histidine kinase [Zea mays]
Length = 995
Score = 173 bits (438), Expect = 8e-42
Identities = 97/176 (55%), Positives = 117/176 (66%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
+VI KPL+AS L L + LG + R G+ L LL K I+VVDDN VNL+VA
Sbjct: 808 SVITKPLKASGLAACLFQTLGITQSSNERRDNSGS--LHGLLLGKNILVVDDNKVNLRVA 865
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
AG LKK+GA+V C +SGK+A+ L+ PH F C MDIQMPEMDGFEATK+IR ME NE
Sbjct: 866 AGTLKKFGAKVECVESGKDALASLQVPHKFHLCLMDIQMPEMDGFEATKQIRAMEAKANE 925
Query: 163 QIERGEAPPECVGVR--QWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
Q + R +W P+LAMTADVIQATHE+C K MDGYV+KPFE +QL
Sbjct: 926 QAVACDDSETDGATRAARWHLPVLAMTADVIQATHEECTKYGMDGYVTKPFEEKQL 981
>gb|ABD49495.1| cytokinin receptor 2 [Physcomitrella patens]
Length = 1082
Score = 172 bits (435), Expect = 2e-41
Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 2/175 (1%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGID--KLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
V+ KPLRAS++ SL+ LG D + +N G ++L +LL KRI+VVDDN VN KV
Sbjct: 899 VVRKPLRASLVAASLEEILGVGDGGRDQGQNLQGGINSLQNLLTGKRILVVDDNPVNRKV 958
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
AAGAL KYGA+V C +SG+ AI LKPPHN+DACFMD+QMPEMDGFEAT+ IR E
Sbjct: 959 AAGALNKYGAQVDCVNSGRAAIQSLKPPHNYDACFMDVQMPEMDGFEATRLIRKAEA--- 1015
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
++ +A R+ PILAMTADVIQAT E+C++ MDGYV+KPF+ L
Sbjct: 1016 AAVDNWQAGRFSSFGRRLHVPILAMTADVIQATSEECMRCGMDGYVAKPFDEHHL 1070
>ref|NP_921024.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAM18726.1| putative histidine kinase [Oryza sativa (japonica cultivar-group)]
gb|AAP53311.1| histidine kinase, putative [Oryza sativa (japonica cultivar-group)]
Length = 925
Score = 136 bits (343), Expect(2) = 2e-36
Identities = 85/170 (50%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Frame = -3
Query: 646 CLFWLLN*GTLYQPDST-KLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQR 470
CL L GTL + K FLL + S+ Y+ N I KPLR S + L +
Sbjct: 712 CLIDLRLKGTLKSWQTMPKFFLLAGSITPADSDCLRLAGYS-NSIRKPLRLSTVAACLSK 770
Query: 469 ALG-GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSG 293
ALG G+ R+ + L S+L K I+VVDDN VN VAAGALKKYGA VTC DSG
Sbjct: 771 ALGVGLTGRRSRDNSL---VLRSVLTGKNILVVDDNAVNRIVAAGALKKYGAIVTCVDSG 827
Query: 292 KEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEA 143
KEAI+ L+PPH FDACFMD+QMPEMDGFEAT+ +R +E +N+ I+ A
Sbjct: 828 KEAISRLQPPHKFDACFMDVQMPEMDGFEATRLVRSVESKINDTIQAASA 877
Score = 39.7 bits (91), Expect(2) = 2e-36
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = -2
Query: 797 KVTKYHLQRLGVQTELTTDLDQYISK--NNCGSQI---AKLVLIDKETWLKES 654
+VT YHL+RLG+Q +L + +S +C S + +VL+DKE W ++S
Sbjct: 653 EVTMYHLRRLGIQCDLAATSESALSALLESCNSSVKSSLNMVLVDKEAWGEDS 705
>gb|ABA88306.1| Hpt domain protein [Pelobacter carbinolicus DSM 2380]
ref|YP_356476.1| Hpt domain protein [Pelobacter carbinolicus DSM 2380]
Length = 1014
Score = 99.8 bits (247), Expect = 1e-19
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = -3
Query: 526 LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
++ + KP+R S L + L A D + + ++ S K R+++V+DN VN +V
Sbjct: 701 VSYLTKPIRPSKLLLHLTNAPPLEDNVQSQTPCPNPASETSTPTKARVLLVEDNPVNQQV 760
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHN-FDACFMDIQMPEMDGFEATKRIRVMERDL 170
A G L+K G VT A G+EA+T H+ FD FMD QMP MDG+EAT+ IR E+
Sbjct: 761 AKGMLEKLGCNVTLAADGQEALTAYS--HSPFDLLFMDCQMPNMDGYEATRAIRADEKQH 818
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
++ PI+AMTA + E+CLK+ MD Y+ KPF Q+
Sbjct: 819 HKT----------------TCPIIAMTAHTLPGDRERCLKAGMDDYLGKPFTMRQV 858
Score = 33.9 bits (76), Expect = 7.1
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L + ++VD + + + L+++G + AD GK+A+ +L+ NF + + +P+
Sbjct: 601 LKNMQALIVDPHPLTRRSVQQQLREWGIKAKTADHGKKALAMLQ-AQNFQIILVALTLPD 659
Query: 220 MDGFE 206
M G E
Sbjct: 660 MPGRE 664
>ref|ZP_01128746.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Nitrococcus mobilis Nb-231]
gb|EAR20358.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Nitrococcus mobilis Nb-231]
Length = 715
Score = 97.4 bits (241), Expect = 5e-19
Identities = 52/129 (40%), Positives = 75/129 (58%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++ +D+IVN K+A LKK+G +V A++GKEA+ + FD MD+QMPEMDG
Sbjct: 453 RILLAEDSIVNQKLALALLKKHGHDVVVANNGKEAVAVFDRDR-FDLVLMDVQMPEMDGL 511
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +R E + + + PI+A+TA ++ EQCL++ MDGYV
Sbjct: 512 EATAAVRAKEANSDRHV-----------------PIIALTAHAMKGDREQCLEAGMDGYV 554
Query: 28 SKPFEGEQL 2
SKP +L
Sbjct: 555 SKPIRAPEL 563
Score = 33.9 bits (76), Expect = 7.1
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQMPE 221
R ++VDDN N + L +G + T + E + L+ + F D MP
Sbjct: 311 RALIVDDNATNRLILNEMLGNWGMQATSVAAVAEGLAALRTAYAARRPFRLVITDCHMPG 370
Query: 220 MDGFEATKRIR 188
DGF+ ++I+
Sbjct: 371 EDGFDLAEKIK 381
>gb|EAN29819.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00605798.1| PAS [Magnetococcus sp. MC-1]
Length = 899
Score = 94.7 bits (234), Expect = 3e-18
Identities = 53/133 (39%), Positives = 74/133 (55%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L + R+++V+DN +N KVA G LK++G + T D G +A+ +K H FD MDIQMPE
Sbjct: 592 LRQDRLLLVEDNPINQKVALGMLKRFGFQATVVDRGAKALQAVK-EHPFDLILMDIQMPE 650
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG+ T IR ER+ R PI A+TA+ + E CL ++M
Sbjct: 651 MDGYATTAAIRHWERESGTP----------------RQPISALTANAMSGDRELCLAADM 694
Query: 40 DGYVSKPFEGEQL 2
D Y+SKP + E L
Sbjct: 695 DDYLSKPLKQEAL 707
>dbj|BAC60018.1| putative histidine kinase [Vibrio parahaemolyticus RIMD 2210633]
ref|NP_798134.1| putative histidine kinase [Vibrio parahaemolyticus RIMD 2210633]
Length = 1051
Score = 94.4 bits (233), Expect = 4e-18
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 16/188 (8%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG------GIDKLHCRNGV----------VGNSTLGSLLHKKR 386
+ KP +A +L+ L +A+G KL+ + VG + + + ++R
Sbjct: 872 VPKPFKADLLKEKLDKAVGLRLPVTASTKLNQSSLTAFEEPEFKQRVGETLSAAPMRRER 931
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++V+DN VN KVA+ L K G + A++G+ A+ + + FD MD MP MDGFE
Sbjct: 932 ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDIILMDCMMPVMDGFE 991
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
ATK+IR E L + +TPI+A+TA V+ ++C S MD YV
Sbjct: 992 ATKQIRAYEASLGLE----------------KTPIIALTASVVDDDIQRCFDSGMDAYVP 1035
Query: 25 KPFEGEQL 2
KP E+L
Sbjct: 1036 KPVRKEKL 1043
Score = 82.8 bits (203), Expect = 1e-14
Identities = 60/173 (34%), Positives = 86/173 (49%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
+I +PL L +L+ G + VV +T L K ++VVDDN VN K+A
Sbjct: 730 IITQPLLGQRLLKALESCAGRFTQ---SISVVQPATRLETLPK--VLVVDDNTVNQKIAG 784
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
+ K G A +G+EA+ L + + MD MP MDGFEATK+IR +E+ N
Sbjct: 785 LHVTKAGFSFDVAANGEEAVDLFRTSQ-YCLILMDCMMPVMDGFEATKQIRQIEQKEN-- 841
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R +R PI+A+TA V+ ++C MD YV KPF+ + L
Sbjct: 842 -------------RTFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPFKADLL 881
>gb|AAZ48812.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_287282.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 631
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/133 (37%), Positives = 77/133 (57%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L K+I++V+D VN K+A L +YG VT A +G EA+ ++ FD MD+QMPE
Sbjct: 508 LTNKQILLVEDTPVNQKIAEKLLSRYGCRVTIAVNGLEALAAVERD-TFDLILMDMQMPE 566
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG EAT+ +R+ E +L R PI+AMTA+ ++ EQC+ + M
Sbjct: 567 MDGVEATRHLRIREAELKLP----------------RQPIVAMTANAMEEDREQCITAGM 610
Query: 40 DGYVSKPFEGEQL 2
D +++KPF +++
Sbjct: 611 DDFIAKPFRADEV 623
>ref|ZP_00658601.1| PAS [Nocardioides sp. JS614]
gb|EAO06596.1| PAS [Nocardioides sp. JS614]
Length = 1090
Score = 92.8 bits (229), Expect = 1e-17
Identities = 60/172 (34%), Positives = 88/172 (51%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+R L+ +LQ LG G LG R++VV+DN VN VAAG
Sbjct: 793 LSKPVRHGELRGALQALLGDATTRPAPASPAGPG-LGI-----RVLVVEDNQVNQLVAAG 846
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L+ G V G EA+ LL PH + A MD +MP +DGF+AT+++R +E +
Sbjct: 847 LLENLGCTVDVVSDGVEAVRLLTRPHEYAAALMDCRMPRLDGFDATRQVR-----RHEPV 901
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R R PI+A+TA ++ E+CL + MD Y++KP + +L
Sbjct: 902 GR-------------RVPIIALTASAMEGERERCLDAGMDDYLTKPVDTAEL 940
Score = 34.3 bits (77), Expect = 5.5
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = -3
Query: 391 KRIIVVDDNIVN---LKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDI 233
+R +V+DDN N L+ GA + V CA EAI L+ +D +D+
Sbjct: 689 RRALVIDDNETNRFILEEQLGAWRMRPVAVACAT---EAIATLREAARSGDPYDVALLDL 745
Query: 232 QMPEMDGFEATKRIR 188
MP DG ++IR
Sbjct: 746 MMPGTDGLMLARQIR 760
>emb|CAG23023.1| hypothetical protein [Photobacterium profundum SS9]
ref|YP_132823.1| hypothetical protein PBPRB1151 [Photobacterium profundum SS9]
Length = 578
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL--KPPHNFDACFMDIQMPEMDG 212
I++V+DNIVN KVA+ LKK G ++ A++G+EA+ L+ K P F A MD MP MDG
Sbjct: 454 ILIVEDNIVNQKVASLLLKKAGYQIVVANNGQEAVDLITQKEPTLFKAILMDCMMPIMDG 513
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
F AT+ IR+ E++ + R PI+A+TA V+ +C ++ MD Y
Sbjct: 514 FAATEAIRLWEKEQHTD----------------RLPIIALTASVLDEDISKCYEAGMDDY 557
Query: 31 VSKPFEGEQL 2
V+KPF E L
Sbjct: 558 VAKPFRKEHL 567
>ref|ZP_00533552.1| Response regulator receiver:ATP-binding region, ATPase-like
[Chlorobium phaeobacteroides BS1]
gb|EAM62082.1| Response regulator receiver:ATP-binding region, ATPase-like
[Chlorobium phaeobacteroides BS1]
Length = 243
Score = 91.7 bits (226), Expect = 3e-17
Identities = 49/131 (37%), Positives = 76/131 (58%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
K +++ +DN++N KVA +LK+ G V A+ G EA+ L K + +D MD+QMPE+
Sbjct: 116 KLHVLLAEDNLINQKVATFSLKQMGFTVDIANHGAEAVQLFKS-NAYDLILMDVQMPELS 174
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
GF+AT+ IR +E L R PI+A+TA+ ++ E+C+ + MD
Sbjct: 175 GFDATREIRSIENSLKNV---------------QRIPIIALTANAMKGDMERCIAAGMDA 219
Query: 34 YVSKPFEGEQL 2
Y+SKPF+ E L
Sbjct: 220 YLSKPFQQEDL 230
>ref|ZP_01090668.1| FOG: CheY-like receiver [Blastopirellula marina DSM 3645]
gb|EAQ80514.1| FOG: CheY-like receiver [Blastopirellula marina DSM 3645]
Length = 954
Score = 90.9 bits (224), Expect = 5e-17
Identities = 67/190 (35%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Frame = -3
Query: 556 SNSHIFREYNLNV-----IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHK 392
S+ H FRE ++ + KP+ AS L SL A+ R+ V + S H
Sbjct: 645 SDRHHFREREEDLPIRSTLAKPITASSLHDSLVEAMSIAAPESQRSRSV---EVLSSFHA 701
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
R+++V+D N K+ LKK G V A +G+EA+ + FD MD+QMP MDG
Sbjct: 702 LRVMLVEDTAANRKLVTSLLKKRGHIVVEAHNGREALEKFRDDE-FDVILMDVQMPIMDG 760
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
+ T IR +ER E G P TPI+AMTA +Q E+CL + MD Y
Sbjct: 761 LQTTAAIRQIER------EEGYEP----------TPIIAMTAHAMQGDREKCLGAGMDAY 804
Query: 31 VSKPFEGEQL 2
+SKP + + L
Sbjct: 805 ISKPIDIDDL 814
Score = 40.0 bits (92), Expect = 0.100
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL----KPPHNFDACFMDIQMPE 221
+++VVDDN N K+ L+ + + +EAI L K FD +D MP
Sbjct: 559 QVLVVDDNETNRKILRELLRSWELDAFTTSDAEEAIRLFSEKQKVGDPFDLVLIDALMPG 618
Query: 220 MDGFEATKRI 191
+DG++ KR+
Sbjct: 619 IDGYDLCKRL 628
>ref|ZP_00988878.1| putative histidine kinase [Vibrio splendidus 12B01]
gb|EAP96017.1| putative histidine kinase [Vibrio splendidus 12B01]
Length = 1059
Score = 90.5 bits (223), Expect = 6e-17
Identities = 53/130 (40%), Positives = 73/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++V+DN VN KVA+ L K G AD+G+ A+ + + +FD MD MP MDG
Sbjct: 937 ERILLVEDNRVNQKVASVMLTKAGYAFEIADNGQIAVDMYQNDSSFDIILMDCMMPVMDG 996
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
F ATK IR E++L +TPI+A+TA VI ++C S MDGY
Sbjct: 997 FTATKEIREHEKNLGLS----------------KTPIIALTASVIDDDIQKCFDSGMDGY 1040
Query: 31 VSKPFEGEQL 2
V+KP E+L
Sbjct: 1041 VAKPVRKEKL 1050
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/129 (36%), Positives = 69/129 (53%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++V+DN +N K+A + K G E A++G+EA+ + ++ MD MP MDGF
Sbjct: 770 KILIVEDNKINQKIAGLHVGKSGFEFEFANNGQEAVDMFTANPHYAVILMDCMMPVMDGF 829
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT IR +E++ N R PI+A+TA VI ++C MD YV
Sbjct: 830 EATSNIRRVEKETN---------------ATRRIPIIALTASVIDDDIQKCFDVGMDDYV 874
Query: 28 SKPFEGEQL 2
KPF+ E L
Sbjct: 875 PKPFKFEML 883
>gb|EAN29674.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606017.1| PAS [Magnetococcus sp. MC-1]
Length = 1202
Score = 90.5 bits (223), Expect = 6e-17
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Frame = -3
Query: 517 IMKPLRASMLQVSL------QRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVN 356
+ KP+R + L+ L +R +GG+ + +N + S +++V+D+ +N
Sbjct: 892 LSKPIRQAQLRALLGQVMRGERVVGGLVERISQNNM-------SATFDAAVLLVEDHPIN 944
Query: 355 LKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMER 176
+VA G L G V A+ G E + L H +D MDIQMP MDG+E T IR
Sbjct: 945 QQVARGMLAGLGCRVEIANDGHEGVRLFAR-HRYDLVLMDIQMPGMDGYETTDAIR---- 999
Query: 175 DLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
Q+ER E P RTPI+A+TA+ ++ ++CL ++MD Y+SKP ++L
Sbjct: 1000 ----QMERSERWP--------RTPIVALTANAMEQDRDRCLAADMDDYLSKPISLDRL 1045
Score = 42.0 bits (97), Expect = 0.026
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL----KPPHNFDACFMDIQMPE 221
R +VVDDN N + L +G SGK+A+ + K +FD +D+ MP
Sbjct: 787 RALVVDDNATNRNLLGRYLSNWGVTHLECASGKQALEKIADAAKFGLSFDLAILDLLMPG 846
Query: 220 MDGFEATKRIRVMERD 173
MDG +RI M +D
Sbjct: 847 MDGLALAERITQMVQD 862
>gb|AAB03699.1| Nik-1
Length = 1281
Score = 90.1 bits (222), Expect = 8e-17
Identities = 50/128 (39%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G+EA+ +K FD MD+QMP M GFE
Sbjct: 1088 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGEEAVEAVKRK-KFDVILMDVQMPIMGGFE 1146
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1147 ATAKIREYERSLGSQ----------------RTPIIALTAHAMMGDREKCIQAQMDEYLS 1190
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1191 KPLQQNHL 1198
>ref|ZP_00828155.1| COG2202: FOG: PAS/PAC domain [Yersinia frederiksenii ATCC 33641]
Length = 1522
Score = 90.1 bits (222), Expect = 8e-17
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKK---RIIVVDDNIVNLKV 347
++KP+ ASML S+ AL + V+ S LH+ R+++V+DN+ N ++
Sbjct: 1132 LVKPITASMLLDSVIDALSERKQPDVAKPVIAES-----LHRLSGIRLLIVEDNLNNQQI 1186
Query: 346 AAGALKKYGAEVTCADSGKEAITLLK-PPHNFDACFMDIQMPEMDGFEATKRIRVMERDL 170
A L+ GAEV+ A+ GKEAI +L+ P +FD MD+QMP MDG+ ATK IR
Sbjct: 1187 ARELLEDEGAEVSIANHGKEAIEILEHHPSSFDLVLMDLQMPIMDGYNATKYIR------ 1240
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
+ +G++ PI+AMTA+ + + + CL + M+ ++ KPF+
Sbjct: 1241 -----------KSLGLK--NLPIIAMTANAMSSDRDACLAAGMNDHIGKPFD 1279
Score = 45.1 bits (105), Expect = 0.003
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Frame = -3
Query: 436 NGVVGNSTLGSL------LHKKRIIVVDDNIVNLKVAAGALKKYGAE----VTCADSGKE 287
N V+ N T +L L+ R++VVDDN A +++ G V A SG +
Sbjct: 1003 NLVINNETPDTLVSRAQALNNLRVLVVDDN----PTACDLIQRMGESLKWVVDVATSGND 1058
Query: 286 AITLLKPPHN----FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVR 119
A+ L++ H + A F+D QMP +DG++ +K +R + ++ G P V +
Sbjct: 1059 ALQLMRQQHESGITYGALFIDWQMPGLDGWQTSKCVREL-----MPVDNG---PMIVMIT 1110
Query: 118 QWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+L ++ QA +DGY+ KP L
Sbjct: 1111 AHDREMLLQRSEEDQAL--------LDGYLVKPITASML 1141
>gb|EAQ93286.1| hypothetical protein CHGG_01521 [Chaetomium globosum CBS 148.51]
Length = 1270
Score = 90.1 bits (222), Expect = 8e-17
Identities = 50/128 (39%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +GKEA+ ++ FD MD+QMP M GFE
Sbjct: 1063 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGKEAVDAVRHK-KFDVILMDVQMPIMGGFE 1121
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1122 ATGKIREYERSLGSQ----------------RTPIIALTAHAMMGDREKCIQAQMDEYLS 1165
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1166 KPLQQNHL 1173
>gb|AAB03698.1| Nik-1 [Neurospora crassa]
Length = 1298
Score = 90.1 bits (222), Expect = 8e-17
Identities = 50/128 (39%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G+EA+ +K FD MD+QMP M GFE
Sbjct: 1088 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGEEAVEAVKRK-KFDVILMDVQMPIMGGFE 1146
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1147 ATAKIREYERSLGSQ----------------RTPIIALTAHAMMGDREKCIQAQMDEYLS 1190
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1191 KPLQQNHL 1198
>gb|AAB01979.1| Os-1p [Neurospora crassa]
ref|XP_964471.1| hypothetical protein [Neurospora crassa N150]
ref|XP_330003.1| hypothetical protein [Neurospora crassa]
gb|EAA35235.1| hypothetical protein [Neurospora crassa]
Length = 1298
Score = 90.1 bits (222), Expect = 8e-17
Identities = 50/128 (39%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G+EA+ +K FD MD+QMP M GFE
Sbjct: 1088 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGEEAVEAVKRK-KFDVILMDVQMPIMGGFE 1146
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1147 ATAKIREYERSLGSQ----------------RTPIIALTAHAMMGDREKCIQAQMDEYLS 1190
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1191 KPLQQNHL 1198
>ref|ZP_00601697.1| PAS [Rubrobacter xylanophilus DSM 9941]
gb|EAN35240.1| PAS [Rubrobacter xylanophilus DSM 9941]
Length = 1375
Score = 90.1 bits (222), Expect = 8e-17
Identities = 60/147 (40%), Positives = 79/147 (53%), Gaps = 19/147 (12%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----------------- 257
I++ +DN VN +VAA LKK G V A +G+EA+ L PP +
Sbjct: 1073 ILLAEDNPVNQQVAASMLKKLGYRVELAQNGEEALKKLFPPPSSPPSSSGREEGGGSPKK 1132
Query: 256 -FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGV-RQWRTPILAMTAD 83
+ A MDIQMP+MDG EAT+RIR E + GV R RTPI+AM+A
Sbjct: 1133 KYAAVLMDIQMPKMDGLEATRRIRSKEEE---------------GVLRLPRTPIIAMSAH 1177
Query: 82 VIQATHEQCLKSEMDGYVSKPFEGEQL 2
+Q E+ LK+ MD Y+SKP + EQL
Sbjct: 1178 AMQEDRERALKAGMDHYISKPVKKEQL 1204
Score = 45.1 bits (105), Expect = 0.003
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNF--------DACFMDI 233
R++VVDDN N + L+ + E +EAI L+ F D +D+
Sbjct: 910 RVLVVDDNATNRTILCRQLEAWRMEPKSVGGAQEAIRELEASGTFLASSSSGYDLVILDM 969
Query: 232 QMPEMDGFEATKRIRVMERDLNEQIERGEA 143
QMPE DG E +RI+ R E+ +RG A
Sbjct: 970 QMPETDGLELARRIK--SRLQEEEEKRGGA 997
>dbj|BAB40947.1| histidine kinase [Magnaporthe grisea]
Length = 1307
Score = 90.1 bits (222), Expect = 8e-17
Identities = 49/128 (38%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G EA+ +K + +D MD+QMP M GFE
Sbjct: 1105 ILLAEDNTVNQRLAVKILEKYNHVVTVVSNGAEALEAVKD-NKYDVILMDVQMPVMGGFE 1163
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1164 ATAKIREYERSLGTQ----------------RTPIIALTAHAMMGDREKCIEAQMDEYLS 1207
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1208 KPLQQNHL 1215
>ref|ZP_00600877.1| PAS [Rubrobacter xylanophilus DSM 9941]
gb|EAN36092.1| PAS [Rubrobacter xylanophilus DSM 9941]
Length = 1063
Score = 90.1 bits (222), Expect = 8e-17
Identities = 60/147 (40%), Positives = 79/147 (53%), Gaps = 19/147 (12%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----------------- 257
I++ +DN VN +VAA LKK G V A +G+EA+ L PP +
Sbjct: 767 ILLAEDNPVNQQVAASMLKKLGYRVELAQNGEEALKKLFPPPSSPPSSSGREEGGGSPKK 826
Query: 256 -FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGV-RQWRTPILAMTAD 83
+ A MDIQMP+MDG EAT+RIR E + GV R RTPI+AM+A
Sbjct: 827 KYAAVLMDIQMPKMDGLEATRRIRSKEEE---------------GVLRLPRTPIIAMSAH 871
Query: 82 VIQATHEQCLKSEMDGYVSKPFEGEQL 2
+Q E+ LK+ MD Y+SKP + EQL
Sbjct: 872 AMQEDRERALKAGMDHYISKPVKKEQL 898
Score = 45.1 bits (105), Expect = 0.003
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNF--------DACFMDI 233
R++VVDDN N + L+ + E +EAI L+ F D +D+
Sbjct: 604 RVLVVDDNATNRTILCRQLEAWRMEPKSVGGAQEAIRELEASGTFLASSSSGYDLVILDM 663
Query: 232 QMPEMDGFEATKRIRVMERDLNEQIERGEA 143
QMPE DG E +RI+ R E+ +RG A
Sbjct: 664 QMPETDGLELARRIK--SRLQEEEEKRGGA 691
>ref|ZP_00592307.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Prosthecochloris aestuarii DSM 271]
gb|EAN22489.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Prosthecochloris aestuarii DSM 271]
Length = 676
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Frame = -3
Query: 448 LHCR--NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITL 275
L CR +G + ++ ++ RI++V+DN++N KVA ++K G E+ A +G+EA+
Sbjct: 525 LSCRQKDGFRSSRSVDDIIRPHRILLVEDNVINQKVAQAMIEKIGYEIDIAVNGEEAVEA 584
Query: 274 LKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILA 95
L+ + MD+QMP MDGFEAT+RIR + R P++A
Sbjct: 585 LQ-QKQYGLVLMDLQMPVMDGFEATRRIRKFGGLASNA----------------RVPVVA 627
Query: 94 MTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
MTA+ + E CL++ MD Y+SKP E + L
Sbjct: 628 MTANATREDRELCLRAGMDDYLSKPVERQVL 658
>gb|AAL30826.1| two-component osmosensing histidine kinase BOS1p [Botryotinia
fuckeliana]
Length = 1315
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/128 (39%), Positives = 73/128 (57%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DNIVN ++A L+KY VT +G+EA+ +K +D MD+QMP M GFE
Sbjct: 1110 ILLAEDNIVNQRLAVKILEKYHHVVTVVGNGQEALDAIKEKR-YDVILMDVQMPIMGGFE 1168
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1169 ATAKIREYERSLGTQ----------------RTPIIALTAHAMLGDREKCIQAQMDEYLS 1212
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1213 KPLKQNHL 1220
>gb|AAL37947.1| two-component osmosensing histidine-kinase [Botryotinia fuckeliana]
Length = 1315
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/128 (39%), Positives = 73/128 (57%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DNIVN ++A L+KY VT +G+EA+ +K +D MD+QMP M GFE
Sbjct: 1110 ILLAEDNIVNQRLAVKILEKYHHVVTVVGNGQEALDAIKEKR-YDVILMDVQMPIMGGFE 1168
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER L Q RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1169 ATAKIREYERSLGTQ----------------RTPIIALTAHAMLGDREKCIQAQMDEYLS 1212
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1213 KPLKQNHL 1220
>ref|ZP_00674598.1| PAS [Trichodesmium erythraeum IMS101]
gb|EAO26705.1| PAS [Trichodesmium erythraeum IMS101]
Length = 1384
Score = 89.4 bits (220), Expect = 1e-16
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGGID-KLHCRNGVVGNSTLGSLLHKK---RIIVVDDNIVN 356
+VI KP++ S L +L G D K+ +N N +L K+ RI++ DD++VN
Sbjct: 1062 SVINKPIKQSQLYEALLNIFSGQDVKVKFKNNNKRNYQTIPVLAKELPLRILLADDHLVN 1121
Query: 355 LKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDGFEATKRIRVME 179
KVA L++ G A +G E + + + P +D MD+QMP MDG EA++ I +
Sbjct: 1122 QKVALRILQRMGYRADLASNGLEVLAAVFRLP--YDVVLMDVQMPLMDGLEASRHI---Q 1176
Query: 178 RDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R+ + + P Q R I+AMTA+V+Q E+C+ + MD Y+SKP + E+L
Sbjct: 1177 REYENATKYSQKSP------QKRPRIIAMTANVMQGYREECIAAGMDDYISKPIQIEEL 1229
Score = 51.2 bits (121), Expect = 4e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KRI++VDDN N + + +G V A++ A+ L+ + FD +D++MPE+DG
Sbjct: 965 KRILIVDDNSTNRTILLRQTESWGMIVRTAENANRALELIATENKFDVAIIDMKMPEIDG 1024
Query: 211 FEATKRI 191
K+I
Sbjct: 1025 LSLGKKI 1031
>ref|YP_435070.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC30645.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 659
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/129 (39%), Positives = 76/129 (58%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN VN KV G L K G E A++G+EA+ ++ +D FMD QMP MDG+
Sbjct: 519 RVLIVEDNQVNQKVTCGILNKLGIETENANNGEEALQKVRGG-KYDLIFMDCQMPVMDGY 577
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
+AT +IR ME GV+ TPI+A+TA+ ++ + C K+ MD Y+
Sbjct: 578 QATAKIRQMETR--------------AGVKP--TPIVALTANALEGAADACRKAGMDDYL 621
Query: 28 SKPFEGEQL 2
SKP + +QL
Sbjct: 622 SKPIKKQQL 630
>ref|NP_900552.1| probable sensor/response regulator hybrid protein [Chromobacterium
violaceum ATCC 12472]
gb|AAQ58556.2| probable sensor/response regulator hybrid protein [Chromobacterium
violaceum ATCC 12472]
Length = 902
Score = 89.0 bits (219), Expect = 2e-16
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
++KP+ AS+L S R GG R + S L R+++ +DN +N +VA
Sbjct: 516 LIKPVSASVLFDSTMRLFGGEAAAGARAAPAADEIDLSPLRGMRVLLAEDNELNQQVATE 575
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L EVT A +G+EA++L + FD MD+QMP MDG EAT+R+R +
Sbjct: 576 LLSAADIEVTVASNGEEALSLAEA-QPFDLALMDMQMPVMDGLEATRRLRRLA------- 627
Query: 157 ERGEAPPECVGVRQW-RTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
W + PILAMTA+ + E+CL++ M+ +V+KP + ++L
Sbjct: 628 -------------SWGKRPILAMTANAMSGDRERCLEAGMNDHVTKPIDPDKL 667
Score = 40.0 bits (92), Expect = 0.100
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDI 233
+ +R +VVDD+ ++ A L+ V A+ G++A+ ++ ++ F+D
Sbjct: 408 MRNRRALVVDDSRAAREILAEQLRGMTFRVDEAEDGEQALERVEQAERDGDRYEVVFLDW 467
Query: 232 QMPEMDGFEATKRI 191
+MP MDG EA +R+
Sbjct: 468 RMPRMDGIEAARRL 481
>ref|ZP_00317496.1| COG0642: Signal transduction histidine kinase [Microbulbifer
degradans 2-40]
Length = 1109
Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/132 (38%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKP---PHNFDACFMDIQMPEM 218
RI+VV+DN+VN +V AG L+ +G T D G++AI+ LK + FMD QMP +
Sbjct: 820 RILVVEDNLVNQQVIAGILEDFGLAFTLVDDGQQAISALKENTGDLRYHFVFMDCQMPVL 879
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DG+ ATK+IR G A EC V PI+A+TA+ +Q ++CL++ M+
Sbjct: 880 DGYNATKQIR-----------EGAAGEECKIV-----PIVALTANAMQGDRDKCLRAGMN 923
Query: 37 GYVSKPFEGEQL 2
YV+KP + +++
Sbjct: 924 DYVAKPVDADEV 935
>ref|ZP_00505065.1| PAS [Clostridium thermocellum ATCC 27405]
gb|EAM45912.1| PAS [Clostridium thermocellum ATCC 27405]
Length = 902
Score = 88.2 bits (217), Expect = 3e-16
Identities = 53/131 (40%), Positives = 73/131 (55%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
K I++ +D+ VN +V AG LKK +T A++G EAI L + + FD MD+QMPEMD
Sbjct: 664 KLNILLAEDDKVNQQVIAGMLKKEQCSLTIAENGFEAIKLFEE-NEFDLILMDVQMPEMD 722
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
G EATKRIR ME I PI+A+TA + E+ L++ MD
Sbjct: 723 GIEATKRIRKMEEGTFRHI-----------------PIIAVTAFAFENDREKILEAGMDD 765
Query: 34 YVSKPFEGEQL 2
Y+SKPF + +
Sbjct: 766 YISKPFSFDDI 776
>gb|AAZ45217.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_283687.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 835
Score = 88.2 bits (217), Expect = 3e-16
Identities = 50/130 (38%), Positives = 70/130 (53%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI+VVDDN+VNL+VA L+K G E A++G EA D MD+QMP MDG
Sbjct: 707 RRILVVDDNMVNLRVAQAMLRKLGIEANAAENGLEATQAATAAERPDLILMDVQMPLMDG 766
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EAT++IR E+ N Q R I+A+TA +E C+ + MD +
Sbjct: 767 LEATRKIRAWEQANN----------------QPRLVIVALTAGAFAEDYEHCIAAGMDDF 810
Query: 31 VSKPFEGEQL 2
++KP +QL
Sbjct: 811 LAKPINHDQL 820
>ref|ZP_01109417.1| multi-sensor hybrid histidine kinase [Alteromonas macleodii 'Deep
ecotype']
gb|EAR06121.1| multi-sensor hybrid histidine kinase [Alteromonas macleodii 'Deep
ecotype']
Length = 959
Score = 88.2 bits (217), Expect = 3e-16
Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL-KPPHNFDACFMDIQMPEM 218
K+++++V+DN +N +A L + A SG EA+ L K FD MD QMPEM
Sbjct: 826 KRKVLIVEDNDINQVIAKQHLSNH--TTLSAKSGVEALQALNKMKVTFDVILMDCQMPEM 883
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DGFEATKRIR GEA G R PI+A+TA+ ++ E+C+ + MD
Sbjct: 884 DGFEATKRIR-----------NGEA-----GSRYLNVPIIALTANAMKGDKERCVSAGMD 927
Query: 37 GYVSKPFEGEQL 2
Y+SKPF+ E L
Sbjct: 928 DYLSKPFDAEDL 939
>ref|ZP_01063537.1| putative histidine kinase [Vibrio sp. MED222]
gb|EAQ54903.1| putative histidine kinase [Vibrio sp. MED222]
Length = 1067
Score = 87.8 bits (216), Expect = 4e-16
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++V+DN VN KVA+ L + G A++G+ A+ + + +FD MD MP MDG
Sbjct: 945 ERILLVEDNRVNQKVASVMLTRAGYAFEIAENGQIAVDMYQNDSSFDIILMDCMMPVMDG 1004
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
F ATK IR E++L +TPI+A+TA VI ++C S MDGY
Sbjct: 1005 FTATKEIREHEKNLGLS----------------KTPIIALTASVIDDDIQKCFDSGMDGY 1048
Query: 31 VSKPFEGEQL 2
V+KP E+L
Sbjct: 1049 VAKPVRKEKL 1058
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/135 (37%), Positives = 74/135 (54%)
Frame = -3
Query: 406 SLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQM 227
SL + +I++V+DN VN K+A + K G E A++G+EA+ + + ++ A MD M
Sbjct: 772 SLEIQHKILIVEDNKVNQKIAGLHVGKSGFEFEFANNGQEAVDMFRSNPHYAAILMDCMM 831
Query: 226 PEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKS 47
P MDGFEAT IR +E++ N R PI+A+TA VI ++C
Sbjct: 832 PVMDGFEATSNIRRVEKETN---------------ATRRIPIIALTASVIDDDIQRCFDV 876
Query: 46 EMDGYVSKPFEGEQL 2
MD YV KPF+ E L
Sbjct: 877 GMDDYVPKPFKFEML 891
>ref|ZP_00054434.2| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 514
Score = 87.4 bits (215), Expect = 5e-16
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI+V +DN VN +VA G L+K G V A G EA+ ++ +D MD+QMPEMDG
Sbjct: 267 RILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAVRA-RPYDLVLMDVQMPEMDGL 325
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
+AT IR + PP R PI+AMTA+ ++ + CL + MD Y+
Sbjct: 326 QATNAIRALS-----------GPPS-------RIPIVAMTANAMRGDDKMCLDAGMDSYI 367
Query: 28 SKPFEGEQL 2
SKP + ++L
Sbjct: 368 SKPIDRQKL 376
>dbj|BAE62834.1| unnamed protein product [Aspergillus oryzae]
Length = 1362
Score = 87.4 bits (215), Expect = 5e-16
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR-----------IIVV 374
V++ PL L+ +L + C+ +GN L +L + I++
Sbjct: 1093 VLVCPLVCVSLKSALDLGISSYMTTPCQPIDLGNGMLPALEGRSTPITTDHSRSFDILLA 1152
Query: 373 DDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKR 194
+DN VN K+A L+K+ +V+ +G EA+ +K H +D MD+QMP M GFEAT +
Sbjct: 1153 EDNDVNQKLAVKILEKHNHKVSVVSNGLEAVEAVKQ-HRYDVILMDVQMPVMGGFEATGK 1211
Query: 193 IRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
IR ER+ RTPI+A+TA + E+C++++MD Y+SKP +
Sbjct: 1212 IREYERESGLS----------------RTPIIALTAHAMLGDREKCIQAQMDEYLSKPLK 1255
Query: 13 GEQL 2
Q+
Sbjct: 1256 QNQM 1259
>ref|ZP_00591131.1| PAS [Prosthecochloris aestuarii DSM 271]
gb|EAN23501.1| PAS [Prosthecochloris aestuarii DSM 271]
Length = 1040
Score = 87.0 bits (214), Expect = 7e-16
Identities = 57/132 (43%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEM 218
K RI++V+DNIVN +VA LKK+G V +GKEA++ L+ P +D MDIQMP M
Sbjct: 911 KARILLVEDNIVNQQVAMLMLKKFGLHVDGVANGKEALSALMSLP--YDVVLMDIQMPVM 968
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DG EAT+RIR GE + PI+AMTA Q+ E CL + M+
Sbjct: 969 DGLEATRRIR-----------NGECGTSAI-------PIIAMTAHAKQSDRELCLATGMN 1010
Query: 37 GYVSKPFEGEQL 2
YVSKP + L
Sbjct: 1011 DYVSKPVNQQAL 1022
Score = 43.9 bits (102), Expect = 0.007
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL----KPPHNFDACFMDI 233
L ++ ++VDDN N ++ + L +G +D+G++A+ +L F +D+
Sbjct: 759 LFGQKALIVDDNATNREILSKRLLSWGMRPEESDNGQDALDMLIRASTSTDAFTIAVIDM 818
Query: 232 QMPEMDGFEATKRIRVMERDLNEQI 158
QMPEMDG K IR E ++ Q+
Sbjct: 819 QMPEMDGVMLGKAIREHEALMSLQM 843
>gb|AAR34678.1| sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_952355.1| sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 835
Score = 86.7 bits (213), Expect = 9e-16
Identities = 52/128 (40%), Positives = 74/128 (57%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++V+DN +N VA G L VT +G+EAI +L+ +F+ FMDI MPEMDG E
Sbjct: 578 VLLVEDNDLNRTVAVGLLTALNQRVTAVTNGREAIDVLRD-RDFELVFMDISMPEMDGIE 636
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT IR RGEA G R TPI+ +TA + A E+CL++++ GY++
Sbjct: 637 ATWAIR-----------RGEA-----GERARSTPIVFLTAHALAADRERCLEADVTGYLT 680
Query: 25 KPFEGEQL 2
KP E+L
Sbjct: 681 KPLLREEL 688
>gb|AAD09491.1| histidine kinase FIK [Fusarium solani f. sp. pisi]
Length = 1283
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/128 (38%), Positives = 71/128 (55%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G EA+ +K FD MD+QMP M GFE
Sbjct: 1088 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGWEAVEAVKRK-KFDVILMDVQMPIMGGFE 1146
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER G+ RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1147 ATGKIREYER----------------GIGTHRTPIIALTAHAMMGDREKCIQAQMDEYLS 1190
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1191 KPLQQNHL 1198
>gb|EAO24717.1| PAS [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00662714.1| PAS [Syntrophomonas wolfei str. Goettingen]
Length = 1442
Score = 86.3 bits (212), Expect = 1e-15
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Frame = -3
Query: 607 PDSTKLFLLENPKSSVKSNSHIFREYNLN-VIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
P + + L+ ++ K ++ +E+ + + KP++ L + LG + +
Sbjct: 1136 PSTRAIHLIMLTSAAQKGDARRAKEHGFSGYLTKPVKRDELLQCISIVLGLKTEASLGDS 1195
Query: 430 VVGNSTL--GSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN 257
+V T+ + + R ++V+DN +N K+ L+K G A SG EA+ L+ +
Sbjct: 1196 IVTRYTIKENPIPARPRFLLVEDNEMNQKIIVKMLEKRGMYCDLACSGAEALKALQQK-D 1254
Query: 256 FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVI 77
+D FMD QMPEMDG+E T RIR ME + + T I+AMTA+ +
Sbjct: 1255 YDIVFMDCQMPEMDGYETTARIRQMEGE------------------ERHTIIVAMTANAM 1296
Query: 76 QATHEQCLKSEMDGYVSKPFEGEQL 2
+ E+CL++ MD Y+SKP + + L
Sbjct: 1297 EGDREKCLQAGMDDYISKPVDFQLL 1321
Score = 43.1 bits (100), Expect = 0.012
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL---KPPHNFDACFMDIQMPEM 218
R+++VDDN N K+ L+ V +DS ++AIT+L +FD +D QMP M
Sbjct: 1064 RVLIVDDNSSNRKIIRTYLEDAQCLVEESDSAEKAITILLSASAVKSFDVVIVDFQMPAM 1123
Query: 217 DGFEATKRIRVM 182
+G E ++ +
Sbjct: 1124 NGHELAAALKAI 1135
>gb|EAN28159.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00607462.1| PAS [Magnetococcus sp. MC-1]
Length = 1044
Score = 86.3 bits (212), Expect = 1e-15
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = -3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLN-VIMKPLRASMLQVSLQRALGGIDKLHCRN 434
QP K+ +L P V S + Y ++ VI K L S++R L G+ L ++
Sbjct: 701 QPHKPKVLVLA-PSFKVASLNAGAAHYGVDGVIPKACSPLKLANSVERLLQGLPLLIEQS 759
Query: 433 GVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNF 254
+V L R+++V+DN +N +VA L++ G +V+ A G +A+ ++ F
Sbjct: 760 ELVQEGAPPQWLQGGRVLLVEDNPINQQVAQELLEQCGLQVSIAQDGVKAVAAVER-ERF 818
Query: 253 DACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQ 74
D MDIQMPEMDG+EAT+RIR + PE + R PI+AMTA +
Sbjct: 819 DLILMDIQMPEMDGYEATRRIRQL--------------PE-----RARLPIIAMTAHAMS 859
Query: 73 ATHEQCLKSEMDGYVSKPFEGEQL 2
++ L + M G+++KP E + L
Sbjct: 860 GDADRSLAAGMQGHLTKPIEIQPL 883
>dbj|BAE67237.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
ref|YP_449511.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
ref|YP_199158.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gb|AAW73773.1| two-component system sensor protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 769
Score = 86.3 bits (212), Expect = 1e-15
Identities = 54/129 (41%), Positives = 71/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++V+DN VNL VA L G E A G+ A+T ++ +D FMD QMP +DG+
Sbjct: 498 RILLVEDNPVNLLVAQKLLAVLGFEADTATDGETALTRMESIR-YDMVFMDCQMPVLDGY 556
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+R R ME E G P PI+AMTA+ + HE+CL + MD Y+
Sbjct: 557 AATRRWRAMET------ESGSRP----------LPIVAMTANAMACDHERCLAAGMDDYL 600
Query: 28 SKPFEGEQL 2
SKP EQL
Sbjct: 601 SKPVAREQL 609
>dbj|BAE49914.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_420473.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 976
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/133 (36%), Positives = 80/133 (60%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L ++++ +DN VN KVA L++ G +VT ++G +A+ ++ ++D MD+QMPE
Sbjct: 708 LRPLKVLLAEDNPVNQKVAILILERSGHKVTGVNNGAQALRAVQEG-DYDIVLMDMQMPE 766
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG E+T+RIR +E + + PILA+TA+ + A E+C+++ M
Sbjct: 767 MDGLESTRRIRALEAPVAQ------------------IPILALTANALAAEFERCMEAGM 808
Query: 40 DGYVSKPFEGEQL 2
DG+V+KPF+ E L
Sbjct: 809 DGFVTKPFQIELL 821
>gb|AAD40816.1| histidine kinase [Fusarium solani f. sp. pisi]
Length = 801
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/128 (38%), Positives = 71/128 (55%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G EA+ +K FD MD+QMP M GFE
Sbjct: 606 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGWEAVEAVKRK-KFDVILMDVQMPIMGGFE 664
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER G+ RTPI+A+TA + E+C++++MD Y+S
Sbjct: 665 ATGKIREYER----------------GIGTHRTPIIALTAHAMMGDREKCIQAQMDEYLS 708
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 709 KPLQQNHL 716
>ref|ZP_00550287.1| PAS [Desulfuromonas acetoxidans DSM 684]
gb|EAM72217.1| PAS [Desulfuromonas acetoxidans DSM 684]
Length = 1969
Score = 85.9 bits (211), Expect = 2e-15
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Frame = -3
Query: 553 NSHIFREYN-LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR--- 386
NS I ++Y + I KP+ L+ SL+ L T G+L H +R
Sbjct: 1563 NSEILKKYGFIGFIAKPITPVSLKTSLEEILNQHP----------GETNGNLRHLERKLN 1612
Query: 385 ------IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMP 224
+++ +DN +N +VA L+ G V + G EA+ L + H+FD MDIQMP
Sbjct: 1613 NHAGQHLLLAEDNPLNQEVALEMLESLGLNVEVVEDGLEAVELARQ-HDFDLILMDIQMP 1671
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
MDG EAT+RIR + P C TPILAMTA+ + + C ++
Sbjct: 1672 VMDGLEATRRIRTL--------------PGCK-----NTPILAMTANAFEEDQKNCSEAG 1712
Query: 43 MDGYVSKPFEGEQL 2
M+ +++KP + E L
Sbjct: 1713 MNAHIAKPVDPELL 1726
Score = 33.5 bits (75), Expect = 9.3
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQMPE 221
R++V DD+ L++ L + VT G EA+ + + F+ MD +MP+
Sbjct: 1473 RVLVADDHPEALEILVYMLTQLQCSVTAVSGGLEAVGAVSMADHTHTPFELVLMDWEMPK 1532
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECV 128
+G +A + I L+E++ APP+ +
Sbjct: 1533 TNGLDAAQLI------LSEKL---TAPPKLI 1554
>ref|ZP_00054895.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1099
Score = 85.9 bits (211), Expect = 2e-15
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALG--GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
KPLR S L ++ R LG G ++ N+ S + RI+V +DN VN +VA G
Sbjct: 810 KPLRQSTLLDTIGRVLGLSGPEEQPAAPAEEHNAP-DSTAKRLRILVAEDNPVNQQVALG 868
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L+K G V G EA+ ++ +D MD+QMPEMDG EAT+ IR +
Sbjct: 869 LLRKLGHTVDVVGDGAEALEAVRLLP-YDVVLMDVQMPEMDGLEATRAIRSLASAAA--- 924
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R PI+AMTA+ ++ + C + MDGY+SKP + +L
Sbjct: 925 ---------------RIPIVAMTANAMRGDDQMCFDAGMDGYISKPIDRHKL 961
>ref|ZP_01091085.1| Response regulator receiver:ATP-binding
region,ATPase-like:Histidine kinase A, N-terminal:Hpt
[Blastopirellula marina DSM 3645]
gb|EAQ80186.1| Response regulator receiver:ATP-binding
region,ATPase-like:Histidine kinase A, N-terminal:Hpt
[Blastopirellula marina DSM 3645]
Length = 837
Score = 85.9 bits (211), Expect = 2e-15
Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALG-GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
++ KP++ S L +L +G G+ LGS +RI++ +DN+VN K+A
Sbjct: 522 ILSKPIKQSDLFDTLMNVMGHGVAGDLATQNAGAEPKLGSW--GRRILLAEDNLVNQKLA 579
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
L+K G VT A GK+A+ K FD MD+QMP +DG AT IR E
Sbjct: 580 VLLLEKRGHLVTVASDGKQAVEAWKEG-GFDLVLMDVQMPILDGMAATTEIRRHETRT-- 636
Query: 163 QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R PI+AMTA ++ E+CL++ MDGYV+KP + L
Sbjct: 637 ---------------ALRIPIIAMTAHAMKGDRERCLEAGMDGYVTKPINAQAL 675
Score = 34.7 bits (78), Expect = 4.2
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLK---PPHNFDACFMDIQMPEMD 215
+++VDDN ++ A L +G + T EAI+L F +D QMP ++
Sbjct: 421 VLIVDDNDTCGEIIAEMLANWGMQPTVIGGAVEAISLYAEEVTSPKFQLLIIDQQMPVLE 480
Query: 214 GFEATKRIRVMER 176
G E +RI+ R
Sbjct: 481 GTELLERIQKSPR 493
>gb|AAZ48443.1| PAS [Dechloromonas aromatica RCB]
ref|YP_286913.1| PAS [Dechloromonas aromatica RCB]
Length = 1028
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L + ++VV+D +N ++A L ++G A++G+ A+ L+K H +D MD+QMPE
Sbjct: 906 LRGRHLLVVEDEAINREIALELLGEFGITADTAENGRHAVELIKIQH-YDLVLMDMQMPE 964
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG EAT+RIR + PE Q PI+AMTA+ E+C+K+ M
Sbjct: 965 MDGLEATRRIRAL--------------PE-----QNAVPIIAMTANAFAEDRERCIKAGM 1005
Query: 40 DGYVSKPFEGEQL 2
+ ++SKP E + L
Sbjct: 1006 NDFLSKPVEPDDL 1018
>ref|XP_387294.1| hypothetical protein FG07118.1 [Gibberella zeae PH-1]
gb|EAA76930.1| hypothetical protein FG07118.1 [Gibberella zeae PH-1]
Length = 796
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/128 (37%), Positives = 71/128 (55%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G EA+ ++ FD MD+QMP M GFE
Sbjct: 597 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGWEAVKAVQSK-KFDVILMDVQMPIMGGFE 655
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER G+ RTPI+A+TA + E+C++++MD Y+S
Sbjct: 656 ATGKIREYER----------------GIGSHRTPIIALTAHAMMGDREKCIQAQMDEYLS 699
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 700 KPLQQNHL 707
>gb|AAR35948.1| sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_953621.1| sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 850
Score = 85.5 bits (210), Expect = 2e-15
Identities = 52/128 (40%), Positives = 67/128 (52%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I+V DD VN + L + G V A +G+E + L+ FD MD+QMP MDGFE
Sbjct: 602 ILVADDVEVNRMLVNAILGRMGHRVAQAANGEEVLKALEDSR-FDLVLMDVQMPVMDGFE 660
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
+RIR ER RTPILA+TA + EQCL ++MDGYV+
Sbjct: 661 TARRIREQERGSGR-----------------RTPILALTAYAGRQDREQCLSADMDGYVA 703
Query: 25 KPFEGEQL 2
KPF E+L
Sbjct: 704 KPFTAEEL 711
>ref|ZP_00660842.1| PAS [Prosthecochloris vibrioformis DSM 265]
gb|EAO15815.1| PAS [Prosthecochloris vibrioformis DSM 265]
Length = 869
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++V+D+ VN +VA L+K G E A G+EA+ L++ +D FMD QMPEMDG+E
Sbjct: 614 VLIVEDSPVNQQVAVAMLRKLGCEPDVASGGREALELMRTTA-YDMVFMDCQMPEMDGYE 672
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWR-TPILAMTADVIQATHEQCLKSEMDGYV 29
AT RIR G++ R P++AMTA+V++ E+C+ S MD Y+
Sbjct: 673 ATGRIR-----------------SGSGMKSSRNVPVVAMTANVMKGDRERCIASGMDDYI 715
Query: 28 SKPFE 14
+KP +
Sbjct: 716 AKPLQ 720
>ref|ZP_00818797.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
gb|EAO98012.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
Length = 644
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPH-NFDACFMDIQMPEMDG 212
R +VV+DN+VN KV L+K+G + C +G +A+ +K H +D MD QMP MDG
Sbjct: 521 RALVVEDNLVNQKVTEALLRKFGFQTECVTNGTDAVRRIKNDHEGYDVILMDCQMPVMDG 580
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
++AT+ IR E+ G Q PI+A+TADV + T + C ++ M+ Y
Sbjct: 581 YDATRMIRDWEQ----------------GNGQSGVPIIALTADVSEDTEKACKEAGMNDY 624
Query: 31 VSKPFEGEQL 2
++KP + L
Sbjct: 625 LTKPVRRDTL 634
>gb|AAR30126.1| putative histidine kinase NIK1p [Gibberella moniliformis]
Length = 1282
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/128 (37%), Positives = 71/128 (55%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+KY VT +G EA+ ++ FD MD+QMP M GFE
Sbjct: 1083 ILLAEDNTVNQRLAVKILEKYHHVVTVVGNGWEAVKAVQSK-KFDVILMDVQMPIMGGFE 1141
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR ER G+ RTPI+A+TA + E+C++++MD Y+S
Sbjct: 1142 ATGKIREYER----------------GIGSHRTPIIALTAHAMMGDREKCIQAQMDEYLS 1185
Query: 25 KPFEGEQL 2
KP + L
Sbjct: 1186 KPLQQNHL 1193
>ref|ZP_00764744.1| COG0642: Signal transduction histidine kinase [Vibrio sp. Ex25]
Length = 1059
Score = 85.1 bits (209), Expect = 3e-15
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSL--------------------L 398
+ KP +A +L+ L +A+G L N V L + +
Sbjct: 880 VPKPFKAGLLKEKLDKAIG----LRISNIVSDEKRLATNTTHTPEKTSHAEQSEATVTPI 935
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEM 218
+RI++V+DN VN KVA+ L K G + A++G+ A+ + + FD MD MP M
Sbjct: 936 RSERILLVEDNRVNQKVASLLLSKAGYQFEVAENGQVAVEMFQKDGGFDIILMDCMMPIM 995
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DGFEA+++IR E +TPI+A+TA V+ ++C S MD
Sbjct: 996 DGFEASRQIRAYEASKGLP----------------KTPIIALTASVVDDDIQRCFDSGMD 1039
Query: 37 GYVSKPFEGEQL 2
YV KP E+L
Sbjct: 1040 AYVPKPVRREKL 1051
Score = 77.4 bits (189), Expect = 6e-13
Identities = 51/136 (37%), Positives = 72/136 (52%)
Frame = -3
Query: 421 NSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACF 242
N+T + +I+VVDDN VN K+A + K G + A +G+EA+ + + + +
Sbjct: 766 NTTTPNAKTLPKILVVDDNTVNQKIAGLHVTKAGFDFDIAVNGEEAVDMFQ-QNQYCLIL 824
Query: 241 MDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHE 62
MD MP MDGFEATK IR QIE E R + PI+A+TA V+ +
Sbjct: 825 MDCMMPVMDGFEATKMIR--------QIEAKEK-------RTVKIPIIALTASVVDDDIQ 869
Query: 61 QCLKSEMDGYVSKPFE 14
+C MD YV KPF+
Sbjct: 870 KCFDVGMDDYVPKPFK 885
>emb|CAG22411.1| hypothetical two-component sensor [Photobacterium profundum SS9]
ref|YP_132211.1| hypothetical two-component sensor [Photobacterium profundum SS9]
Length = 680
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Frame = -3
Query: 436 NGVVGNSTLGSLLH---------KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEA 284
+GV+ N + +L + +++VV+D +VN KVA L+K G EV A +G+
Sbjct: 522 SGVITNDSTAALTRELDPEASTPRAKVLVVEDAVVNQKVAKMMLEKLGVEVMIASNGQIG 581
Query: 283 ITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTP 104
+ + + H+FD FMD QMP +DGF ATK IR +E++ + P
Sbjct: 582 VDMYQE-HDFDMIFMDCQMPVLDGFGATKAIRNLEQNTS------------------HIP 622
Query: 103 ILAMTADVIQATHEQCLKSEMDGYVSKP 20
I+A+TA+V++ ++C ++ MD +VSKP
Sbjct: 623 IIALTANVVKEEKDKCYEAGMDDFVSKP 650
Score = 48.5 bits (114), Expect = 3e-04
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKP----PHNFDACFMDIQMPEM 218
+++VDD+++N+++ + L +GA+ C D +AI ++K + FD +D MP +
Sbjct: 323 VLLVDDSMLNMRITSAQLNNFGAKSICCDDATQAIDIVKQAIANKNPFDLVIIDKIMPHL 382
Query: 217 DGFE 206
DGFE
Sbjct: 383 DGFE 386
>gb|AAU10313.1| two-component histidine kinase [Alternaria brassicicola]
Length = 1328
Score = 84.7 bits (208), Expect = 4e-15
Identities = 50/129 (38%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1119 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1177
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ERD G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1178 EATAKIREWERDN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1221
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1222 SKPLRQNQL 1230
>gb|AAU10319.1| two-component histidine kinase [Alternaria brassicicola]
Length = 1328
Score = 84.7 bits (208), Expect = 4e-15
Identities = 50/129 (38%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1119 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1177
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ERD G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1178 EATAKIREWERDN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1221
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1222 SKPLRQNQL 1230
>ref|ZP_00419673.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Azotobacter vinelandii AvOP]
gb|EAM04007.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Azotobacter vinelandii AvOP]
Length = 917
Score = 84.7 bits (208), Expect = 4e-15
Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Frame = -3
Query: 487 QVSLQRALGGIDKLHCRNGVV------GNSTLGSLLHKK-RIIVVDDNIVNLKVAAGALK 329
Q+ LQ DKL G + G+ TLG L ++ R++ VDDN NL + L
Sbjct: 626 QIQLQSKPAHRDKLQAALGELLTPQPTGSQTLGPLGNRAPRLLCVDDNPANLLLVQTLLG 685
Query: 328 KYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERG 149
GA VT ADSG A+ + FD FMD+QMP MDG +AT+ IR Q E G
Sbjct: 686 DMGAAVTVADSGHAAVEAAQR-ERFDLIFMDVQMPGMDGRQATRAIR--------QWEAG 736
Query: 148 EAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ PE Q TPI+A+TA + L+S MD Y++KP QL
Sbjct: 737 Q--PE-----QRHTPIIALTAHALANERRALLQSGMDDYMTKPINERQL 778
>ref|ZP_01062767.1| hypothetical protein MED222_08498 [Vibrio sp. MED222]
gb|EAQ55446.1| hypothetical protein MED222_08498 [Vibrio sp. MED222]
Length = 880
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/130 (35%), Positives = 74/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++V+DN++N K+A+ L++ G E A +G+EA+ ++ FDA MD MP MDG
Sbjct: 757 RRILIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDG 816
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E D + PP PI+A+TA V++ + C ++ M+ Y
Sbjct: 817 ITATRVIREWETD-------QQTPP---------LPIIALTASVLEEDIKNCFEAGMNAY 860
Query: 31 VSKPFEGEQL 2
+ KP++ QL
Sbjct: 861 LPKPYKSHQL 870
>ref|XP_662083.1| hypothetical protein AN4479.2 [Aspergillus nidulans FGSC A4]
gb|EAA60822.1| hypothetical protein AN4479.2 [Aspergillus nidulans FGSC A4]
Length = 1300
Score = 84.7 bits (208), Expect = 4e-15
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR-----------IIVV 374
V++ PL L+ +L + C +GN L +L + I++
Sbjct: 1053 VLVCPLVCVSLKSALDLGISSYMTTPCEPIDLGNGMLPALEGRSTPITTDHSRSFDILLA 1112
Query: 373 DDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKR 194
+DN VN K+A L+K+ V+ +G EA+ +K +D MD+QMP M GFEAT +
Sbjct: 1113 EDNDVNQKLAVKILEKHNHNVSVVGNGLEAVEAVKQ-RRYDVILMDVQMPVMGGFEATGK 1171
Query: 193 IRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
IR ERD RTPI+A+TA + E+C++++MD Y+SKP +
Sbjct: 1172 IREYERDSGLS----------------RTPIIALTAHAMLGDREKCIQAQMDEYLSKPLK 1215
Query: 13 GEQL 2
Q+
Sbjct: 1216 QNQM 1219
>gb|AAM05416.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
ref|NP_616936.1| sensory transduction histidine kinase [Methanosarcina acetivorans
C2A]
Length = 1000
Score = 84.7 bits (208), Expect = 4e-15
Identities = 51/145 (35%), Positives = 77/145 (53%)
Frame = -3
Query: 436 NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN 257
NG+ +L ++ +D+ +N K+ G L+K G ++T SGK+A+ L +
Sbjct: 713 NGITSGESLN-------VLFAEDHPINQKLILGLLEKKGHKLTLVTSGKDALDALSR-RD 764
Query: 256 FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVI 77
FDA MDIQMP MDG EAT+RIR GVR+ PI+A TA +
Sbjct: 765 FDAVLMDIQMPGMDGLEATRRIR----------------DPSSGVRRHNIPIIAFTARAL 808
Query: 76 QATHEQCLKSEMDGYVSKPFEGEQL 2
+ E+C ++ M+ Y+SKP + E+L
Sbjct: 809 KEDREKCFEAGMNYYISKPLKKEKL 833
>gb|AAF04854.1| histidine protein kinase homolog GacS [Azotobacter vinelandii]
Length = 905
Score = 84.7 bits (208), Expect = 4e-15
Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Frame = -3
Query: 487 QVSLQRALGGIDKLHCRNGVV------GNSTLGSLLHKK-RIIVVDDNIVNLKVAAGALK 329
Q+ LQ DKL G + G+ TLG L ++ R++ VDDN NL + L
Sbjct: 614 QIQLQSKPAHRDKLQAALGELLTPQPTGSQTLGPLGNRAPRLLCVDDNPANLLLVQTLLG 673
Query: 328 KYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERG 149
GA VT ADSG A+ + FD FMD+QMP MDG +AT+ IR Q E G
Sbjct: 674 DMGAAVTVADSGHAAVEAAQR-ERFDLIFMDVQMPGMDGRQATRAIR--------QWEAG 724
Query: 148 EAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ PE Q TPI+A+TA + L+S MD Y++KP QL
Sbjct: 725 Q--PE-----QRHTPIIALTAHALANERRALLQSGMDDYMTKPINERQL 766
>gb|AAQ19476.1| histidine kinase J7 [Emericella nidulans]
Length = 1297
Score = 84.7 bits (208), Expect = 4e-15
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR-----------IIVV 374
V++ PL L+ +L + C +GN L +L + I++
Sbjct: 1053 VLVCPLVCVSLKSALDLGISSYMTTPCEPIDLGNGMLPALEGRSTPITTDHSRSFDILLA 1112
Query: 373 DDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKR 194
+DN VN K+A L+K+ V+ +G EA+ +K +D MD+QMP M GFEAT +
Sbjct: 1113 EDNDVNQKLAVKILEKHNHNVSVVGNGLEAVEAVKQ-RRYDVILMDVQMPVMGGFEATGK 1171
Query: 193 IRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
IR ERD RTPI+A+TA + E+C++++MD Y+SKP +
Sbjct: 1172 IREYERDSGLS----------------RTPIIALTAHAMLGDREKCIQAQMDEYLSKPLK 1215
Query: 13 GEQL 2
Q+
Sbjct: 1216 QNQM 1219
>ref|NP_744030.1| sensor histidine kinase/response regulator [Pseudomonas putida
KT2440]
gb|AAN67494.1| sensor histidine kinase/response regulator [Pseudomonas putida
KT2440]
Length = 785
Score = 84.7 bits (208), Expect = 4e-15
Identities = 59/175 (33%), Positives = 88/175 (50%)
Frame = -3
Query: 526 LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
L+ + +PL + L +L+R L G + H + + + RI++V+DN VN V
Sbjct: 623 LHQLARPLARNALYQTLRRTLQGHEPEH----PLAIPAITQEQGRARILLVEDNPVNQLV 678
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
A G L K G +V A G EA+ LL FD MD MP MDG+EA++RIR
Sbjct: 679 AKGMLAKLGCQVQLATQGAEALELLAR-EEFDLVLMDCNMPVMDGYEASRRIR------- 730
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ G P PI+A+TA+ + E+C + M+ Y++KPF E+L
Sbjct: 731 ---QSGRWP---------ELPIVALTANAMPEERERCRAAGMNDYLAKPFRREEL 773
>ref|ZP_00902914.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Pseudomonas putida F1]
gb|EAP47929.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Pseudomonas putida F1]
Length = 785
Score = 84.7 bits (208), Expect = 4e-15
Identities = 59/175 (33%), Positives = 88/175 (50%)
Frame = -3
Query: 526 LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
L+ + +PL + L +L+R L G + H + + + RI++V+DN VN V
Sbjct: 623 LHQLARPLARNALYQTLRRTLQGHEPEH----PLAIPAITQEQGRARILLVEDNPVNQLV 678
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
A G L K G +V A G EA+ LL FD MD MP MDG+EA++RIR
Sbjct: 679 AKGMLAKLGCQVQLATQGAEALELLAR-EEFDLVLMDCNMPVMDGYEASRRIR------- 730
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ G P PI+A+TA+ + E+C + M+ Y++KPF E+L
Sbjct: 731 ---QSGRWP---------ELPIVALTANAMPEERERCRAAGMNDYLAKPFRREEL 773
>ref|ZP_00659515.1| PAS [Nocardioides sp. JS614]
gb|EAO05675.1| PAS [Nocardioides sp. JS614]
Length = 1072
Score = 84.3 bits (207), Expect = 5e-15
Identities = 55/172 (31%), Positives = 85/172 (49%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+ + ++ +L R L G++ V G + R++VV+DN VN VA G
Sbjct: 770 LTKPVLGAEVRAALLRHLAGVEPRPEPELPVVGPDPGP---RARVLVVEDNEVNQLVAVG 826
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L+ G A+ G A+T L H FD MD+QMP MDG+ AT+ IR E D
Sbjct: 827 LLEALGYRARVAEDGAAALTALAEEH-FDLVLMDVQMPRMDGYAATRAIRAGESD----- 880
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ R P++AMTA ++ E+C+ + MD +++KP + L
Sbjct: 881 ------------GRSRLPVVAMTAAAVEGERERCVAAGMDDFLTKPVDAGAL 920
Score = 38.5 bits (88), Expect = 0.29
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -3
Query: 406 SLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFM 239
S L +R++VVDDN N + L + V A S EA + H F+A +
Sbjct: 662 SWLSGRRVLVVDDNQHNRLILEEQLGWWRIRVAAASSADEAEQAVAAAHAAGDPFEAVLL 721
Query: 238 DIQMPEMDGFEATKRIR 188
D+ MP DG + + +R
Sbjct: 722 DLSMPGRDGLDLARSLR 738
>ref|YP_476763.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
gb|ABD01500.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone B-Prime]
Length = 1526
Score = 84.3 bits (207), Expect = 5e-15
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKK--------RIIVVDDNI 362
++KP++ S LQ +L ALG L ++G S + + RI++ +DN
Sbjct: 1202 LVKPVKQSRLQEALVMALGKSSGLS--TSLLGMSPVLPQTTPREDRPRQSLRILLAEDNP 1259
Query: 361 VNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVM 182
VN KVA L+ G + +G+E + LL+ ++D MD QMP MDG+EAT+R+R
Sbjct: 1260 VNQKVALRQLESLGYKADVVANGQEVLDLLQKV-SYDLILMDCQMPVMDGYEATRRLRQQ 1318
Query: 181 ERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
ER RT ++A+TA+ +Q E+CL++ MD Y+SKP E L
Sbjct: 1319 ERRSGH-----------------RTVVIAITANAMQEDRERCLQAGMDDYLSKPVLKEDL 1361
Score = 38.1 bits (87), Expect = 0.38
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDI 233
L KR++ VDDN N K+ +G V A++ +A+ L+ F +D+
Sbjct: 1094 LQGKRLLAVDDNATNRKILRCQATTWGMVVEEAENAYQAMDKLRQAVREGRPFPLAVLDM 1153
Query: 232 QMPEMDG 212
QMPE+DG
Sbjct: 1154 QMPEVDG 1160
>ref|ZP_00520847.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Two component regulator propeller
[Solibacter usitatus Ellin6076]
gb|EAM60259.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Two component regulator propeller
[Solibacter usitatus Ellin6076]
Length = 1349
Score = 84.3 bits (207), Expect = 5e-15
Identities = 54/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITL--LKPPHNFDACFMDIQMPEMD 215
R++V +DN+VN KV+A L K G A G+EA+ L L P +D FMD QMPEMD
Sbjct: 1185 RVLVAEDNVVNQKVSARMLDKLGIRADVAADGREAVALFGLVP---YDLIFMDCQMPEMD 1241
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
G+ AT+ IR R E P R PI AMTA+V+ E CL + MD
Sbjct: 1242 GYAATREIR-----------RREGPGR-------RVPIAAMTAEVLGGCRELCLAAGMDD 1283
Query: 34 YVSKPFEGEQL 2
++ KP + E L
Sbjct: 1284 HIPKPVKMEVL 1294
Score = 38.9 bits (89), Expect = 0.22
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPH----NFDACFMDIQMPE 221
R ++VDDN +N +V + +G +G+EA+ L+ H + +D +MP
Sbjct: 1029 RALIVDDNEINRRVLHEQIIGWGMRNGSFAAGEEALVALRAAHAAGDPYHFAILDYRMPG 1088
Query: 220 MDGFEATKRIRVMERDLNEQI 158
MDG E + I+ + +L E +
Sbjct: 1089 MDGVEVARAIKA-DDELRETV 1108
>ref|ZP_00832341.1| COG2202: FOG: PAS/PAC domain [Yersinia intermedia ATCC 29909]
Length = 1521
Score = 84.3 bits (207), Expect = 5e-15
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
++KP+ ASML S+ AL + V+ + L R+++V+DN+ N ++A
Sbjct: 1131 LVKPITASMLLDSVIDALSERKQPDITKQVITEPS--HRLSGIRLLIVEDNLNNQQIARE 1188
Query: 337 ALKKYGAEVTCADSGKEAITLLK-PPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L+ GA+V A+ GKEAI +L+ P FD MD+QMP MDG+ ATK IR
Sbjct: 1189 LLEDEGADVRIANHGKEAIEILEHHPSLFDLVLMDLQMPVMDGYNATKYIR--------- 1239
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
+ +G++ PI+AMTA+ + + + CL + M+ ++ KPF+
Sbjct: 1240 --------KSLGLK--NLPIIAMTANAMASDRDACLAAGMNDHIGKPFD 1278
Score = 46.6 bits (109), Expect = 0.001
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAE----VTCADSGKEAITLLKPPHN----FDAC 245
L+ R++VVDDN A +K+ G V A SG EA+ L++ H+ + A
Sbjct: 1020 LNNLRVLVVDDN----PTACDLIKQMGESLKWTVDVATSGNEALQLMRQQHDSGITYGAL 1075
Query: 244 FMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATH 65
F+D QMP +DG++ +K +R + ++ G P V + +L ++ QA
Sbjct: 1076 FIDWQMPGLDGWQTSKYVREL-----MPVDNG---PMIVMITAHDREMLLQRSEEDQAL- 1126
Query: 64 EQCLKSEMDGYVSKPFEGEQL 2
+DGY+ KP L
Sbjct: 1127 -------LDGYLVKPITASML 1140
>ref|ZP_00990579.1| hypothetical protein V12B01_11270 [Vibrio splendidus 12B01]
gb|EAP94474.1| hypothetical protein V12B01_11270 [Vibrio splendidus 12B01]
Length = 863
Score = 84.0 bits (206), Expect = 6e-15
Identities = 46/130 (35%), Positives = 74/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++V+DN++N K+A+ L++ G E A +G+EA+ ++ FDA MD MP MDG
Sbjct: 740 RRILIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDG 799
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E D +A P PI+A+TA V++ + C ++ M+ Y
Sbjct: 800 ITATRAIRQWETD-------QQAAP---------LPIIALTASVLEEDIKHCFEAGMNAY 843
Query: 31 VSKPFEGEQL 2
+ KP++ QL
Sbjct: 844 LPKPYKSHQL 853
>ref|XP_749489.1| two-component osmosensing histidine kinase (Bos1) [Aspergillus
fumigatus Af293]
gb|EAL87451.1| two-component osmosensing histidine kinase (Bos1), putative
[Aspergillus fumigatus Af293]
Length = 1337
Score = 84.0 bits (206), Expect = 6e-15
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR-----------IIVV 374
V++ PL L+ +L + C+ +GN L +L + I++
Sbjct: 1091 VLVCPLVCVSLKSALDLGISSYMTTPCQPIDLGNGMLPALEGRSTPITTDHSRSFDILLA 1150
Query: 373 DDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKR 194
+DN VN K+A L+K+ V+ +G EA+ +K +D MD+QMP M GFEAT +
Sbjct: 1151 EDNDVNQKLAVKILEKHNHNVSVVGNGLEAVEAVKK-RRYDVILMDVQMPVMGGFEATGK 1209
Query: 193 IRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
IR ER+ RTPI+A+TA + E+C++++MD Y+SKP +
Sbjct: 1210 IREYEREAGLS----------------RTPIIALTAHAMLGDREKCIQAQMDEYLSKPLK 1253
Query: 13 GEQL 2
Q+
Sbjct: 1254 QNQM 1257
>ref|ZP_01113539.1| sensor/response regulator hybrid [Reinekea sp. MED297]
gb|EAR10337.1| sensor/response regulator hybrid [Reinekea sp. MED297]
Length = 951
Score = 84.0 bits (206), Expect = 6e-15
Identities = 60/184 (32%), Positives = 89/184 (48%)
Frame = -3
Query: 553 NSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVV 374
N+H+ + + +P R+ L +L + I+ H +LG + ++ V
Sbjct: 616 NAHLLEQGAHYYLTRPFRSGELYQALLKL---IEPEHEGREHHKELSLGHVRSVVSVLAV 672
Query: 373 DDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKR 194
DDN NLK+ L+ G EVT A SG+EA+ L FD FMDIQMP MDG AT++
Sbjct: 673 DDNPANLKLIVTLLESLGVEVTSASSGEEAVKLATDT-VFDLVFMDIQMPSMDGMAATRQ 731
Query: 193 IRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
IR E N + PI+A+TA + E L++ MD Y++KP +
Sbjct: 732 IRRAEPS-NRHV-----------------PIIALTAHALAEEREAMLEAGMDDYLAKPID 773
Query: 13 GEQL 2
+QL
Sbjct: 774 EDQL 777
>ref|ZP_00687387.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Burkholderia ambifaria AMMD]
gb|EAO46180.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Burkholderia ambifaria AMMD]
Length = 1241
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/129 (36%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN VN ++A L+ V AD G++A+ +L+ FD MD QMP +DGF
Sbjct: 958 RVLLVEDNAVNQQIALAMLEDTDYRVAVADDGEQALKMLEQDA-FDVVLMDCQMPVLDGF 1016
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT+R+R E + AP R P++A+TA+ + E+CL + MD Y+
Sbjct: 1017 EATRRLRRREAEAG-------AP---------RLPVIALTANALSGDRERCLAAGMDDYL 1060
Query: 28 SKPFEGEQL 2
KPF + L
Sbjct: 1061 GKPFRRDAL 1069
Score = 34.3 bits (77), Expect = 5.5
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQMPE 221
R+++VDD+ + V ++ V A G +A++ L+ FD +D++MP
Sbjct: 805 RVLIVDDSETDRSVLLEHAIEWHLCVASAIGGDDALSQLRAAVADGAPFDLAIIDVRMPG 864
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTA----DVIQATHEQCL 53
MDG + IR RD P +R I+ +TA D IQ HE +
Sbjct: 865 MDGISLVQHIR---RD-----------PALRALR-----IITLTAFEMMDSIQVAHELDI 905
Query: 52 KSEMDGYVSKPFEGEQL 2
+ + +KP G L
Sbjct: 906 AARL----TKPLHGNDL 918
>gb|AAO07691.1| FOG: CheY-like receiver [Vibrio vulnificus CMCP6]
ref|NP_762701.1| FOG: CheY-like receiver [Vibrio vulnificus CMCP6]
Length = 815
Score = 84.0 bits (206), Expect = 6e-15
Identities = 45/130 (34%), Positives = 72/130 (55%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++ +DN++N K+A+ L+K G + +G+EA+ + FDA MD MP MDG
Sbjct: 692 RRILIAEDNLMNQKIASFFLEKAGFDYLITSNGQEALDAITQGGKFDAVLMDCMMPVMDG 751
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E E+G +TPI+A+TA V++ + C ++ MD Y
Sbjct: 752 ITATREIRRWE------TEQGSG----------KTPIIALTASVLEEDIQSCFEAGMDAY 795
Query: 31 VSKPFEGEQL 2
+ KP++ QL
Sbjct: 796 LPKPYKSNQL 805
>dbj|BAC97255.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
ref|NP_937285.1| hypothetical protein VVA1229 [Vibrio vulnificus YJ016]
Length = 881
Score = 84.0 bits (206), Expect = 6e-15
Identities = 45/130 (34%), Positives = 72/130 (55%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++ +DN++N K+A+ L+K G + +G+EA+ + FDA MD MP MDG
Sbjct: 758 RRILIAEDNLMNQKIASFFLEKAGFDYLITSNGQEALDAITQGGKFDAVLMDCMMPVMDG 817
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E E+G +TPI+A+TA V++ + C ++ MD Y
Sbjct: 818 ITATREIRRWE------TEQGSG----------KTPIIALTASVLEEDIQSCFEAGMDAY 861
Query: 31 VSKPFEGEQL 2
+ KP++ QL
Sbjct: 862 LPKPYKSNQL 871
>gb|AAP80772.1| MmoS [Methylococcus capsulatus]
Length = 1177
Score = 83.6 bits (205), Expect = 8e-15
Identities = 54/172 (31%), Positives = 84/172 (48%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
++KP+R S+L ++ L + R T+ +R++VV+DN VN KV
Sbjct: 867 LLKPVRQSLLFNAIAEVLAAKATVQ-RRPAAKTETVLPAYEGRRVLVVEDNRVNQKVIVA 925
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L K+G AD+G+ A+ LL ++D MD QMP + G+EAT +R E +
Sbjct: 926 MLGKFGIVPDVADNGQAALELLARS-SYDLVLMDCQMPVLGGYEATGELRAREMSAGGR- 983
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
RTP++A+TA E+CL + MD Y+SKP ++L
Sbjct: 984 ---------------RTPVVALTAHAATGEREKCLAAGMDDYLSKPISRDRL 1020
Score = 44.3 bits (103), Expect = 0.005
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAI----TLLKPPHNFDACFMDIQMP 224
+R++VVDDN N + + L +G EV A+ G A+ T L +D +D+ MP
Sbjct: 763 RRVLVVDDNATNRVILSHYLTHWGLEVDEAERGDTALNRLRTALHESRPYDIVLLDLHMP 822
Query: 223 EMDGFEATK 197
MDG E +
Sbjct: 823 YMDGHELAR 831
>gb|AAU92711.1| sensory box histidine kinase/response regulator [Methylococcus
capsulatus str. Bath]
ref|YP_113669.1| sensory box histidine kinase/response regulator [Methylococcus
capsulatus str. Bath]
Length = 1177
Score = 83.6 bits (205), Expect = 8e-15
Identities = 54/172 (31%), Positives = 84/172 (48%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
++KP+R S+L ++ L + R T+ +R++VV+DN VN KV
Sbjct: 867 LLKPVRQSLLFNAIAEVLAAKATVQ-RRPAAKTETVLPAYEGRRVLVVEDNRVNQKVIVA 925
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L K+G AD+G+ A+ LL ++D MD QMP + G+EAT +R E +
Sbjct: 926 MLGKFGIVPDVADNGQAALELLARS-SYDLVLMDCQMPVLGGYEATGELRAREMSAGGR- 983
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
RTP++A+TA E+CL + MD Y+SKP ++L
Sbjct: 984 ---------------RTPVVALTAHAATGEREKCLAAGMDDYLSKPISRDRL 1020
Score = 44.3 bits (103), Expect = 0.005
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAI----TLLKPPHNFDACFMDIQMP 224
+R++VVDDN N + + L +G EV A+ G A+ T L +D +D+ MP
Sbjct: 763 RRVLVVDDNATNRVILSHYLTHWGLEVDEAERGDTALNRLRTALHESRPYDIVLLDLHMP 822
Query: 223 EMDGFEATK 197
MDG E +
Sbjct: 823 YMDGHELAR 831
>gb|AAZ44799.1| PAS [Dechloromonas aromatica RCB]
ref|YP_283269.1| PAS [Dechloromonas aromatica RCB]
Length = 1193
Score = 83.6 bits (205), Expect = 8e-15
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Frame = -3
Query: 502 RASMLQVSLQRALGGIDKLHCRNGVVGN----STLGSLLHKK-----------------R 386
R M+ S ALG ++LHC + V+ + +G L+ + R
Sbjct: 876 RLVMVTASDTAALGSDERLHCVDAVLSKPVTAAQIGKLVRDRELQNHAKPNAPAPLAGLR 935
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDGF 209
I++VDD NL +A L+ +G V AD+G A+ ++ +++D MDIQMPEMDG
Sbjct: 936 ILLVDDMPTNLLIAGEMLESFGITVDTADNGVLALKKVIDEGNDYDIVLMDIQMPEMDGL 995
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT+R+R +ER + PI+AMTA+ + ++CL + M+ ++
Sbjct: 996 EATRRLRAVERSQS-------------------LPIIAMTANAQDSERQRCLAAGMNDFL 1036
Query: 28 SKPFE 14
+KP +
Sbjct: 1037 TKPID 1041
Score = 43.1 bits (100), Expect = 0.012
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = -3
Query: 427 VGNSTLGS---LLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN 257
+G STL + L +R +VVDD+ + + L+K+G A+SG EA+ LL
Sbjct: 784 LGLSTLEANPPLSAMRRALVVDDSPLARAILIRLLEKHGYSAIPAESGAEALGLLADTRT 843
Query: 256 --FDACFMDIQMPEMDGFEATKRIR 188
F+ +D MP MDG E ++ IR
Sbjct: 844 APFEFVTIDFNMPGMDGLELSEAIR 868
>ref|ZP_00523020.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Solibacter usitatus Ellin6076]
gb|EAM57911.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Solibacter usitatus Ellin6076]
Length = 630
Score = 83.6 bits (205), Expect = 8e-15
Identities = 50/136 (36%), Positives = 72/136 (52%)
Frame = -3
Query: 427 VGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDA 248
+ S G L R++V +DN++N KV L++ G VT A +G+EA FD
Sbjct: 492 MAESAPGELPPVLRVLVAEDNVINQKVICSMLRRQGWTVTLALNGEEAYRRFLESR-FDL 550
Query: 247 CFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQAT 68
MD+QMPE+DG E+++RIR ER+ + R PILA+TA A
Sbjct: 551 ILMDVQMPEVDGLESSRRIRQAERN----------------HKLGRIPILALTAHAATAQ 594
Query: 67 HEQCLKSEMDGYVSKP 20
H+QCL + MD ++KP
Sbjct: 595 HKQCLAAGMDAVITKP 610
>ref|ZP_00817298.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
gb|EAO99414.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
Length = 782
Score = 83.6 bits (205), Expect = 8e-15
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++V+DN VN VA+ LKK G V A++G+ A+ L+ +D MD QMP MDG+E
Sbjct: 657 ILLVEDNQVNQLVASSLLKKLGHRVDHAENGRRALEALQNK-TYDLVLMDCQMPVMDGYE 715
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLKSEMDGYV 29
AT+ IR + P QW+T P++A+TA+V+Q E CL S M+ Y+
Sbjct: 716 ATRAIR-------------QNP-------QWQTLPVIAVTANVMQGDREDCLASGMNDYI 755
Query: 28 SKPFEGEQL 2
+KP+ ++L
Sbjct: 756 TKPYNRDEL 764
>dbj|BAE52539.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_423098.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 992
Score = 83.6 bits (205), Expect = 8e-15
Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGN-STLGSLLHKKRIIVVDDNIVNLKVAA 341
I KPLR + L R LG ++ + + RI+V +DN VN +VA
Sbjct: 701 IHKPLRRQTILAVLARVLGLPHDPGLQDSPESEPEAIPRPARRLRILVAEDNPVNQQVAV 760
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
G L+K G V A G EA+ ++ +D MD+QMPEMDG +AT IR +
Sbjct: 761 GLLRKLGHSVDVAADGAEAVEAVRS-RPYDLVLMDVQMPEMDGLQATAAIRALTGGAE-- 817
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R PI+AMTA+ ++ CL + MD Y+SKP + +L
Sbjct: 818 ----------------RVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKL 854
>gb|AAZ48868.1| PAS [Dechloromonas aromatica RCB]
ref|YP_287338.1| PAS [Dechloromonas aromatica RCB]
Length = 916
Score = 83.6 bits (205), Expect = 8e-15
Identities = 50/128 (39%), Positives = 74/128 (57%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++V+D+ N K+A G L K+G T A +G+EA+ +L +FD MD+QMP M G E
Sbjct: 795 ILLVEDHPTNQKLALGLLNKWGHHGTLAQNGQEALDILAS-QSFDIILMDMQMPVMSGVE 853
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR E + + P RTPI+AMTA +Q + CL + MD Y++
Sbjct: 854 ATQRIRAREAAM-------QLP---------RTPIIAMTAAAMQDDRDACLAAGMDDYLA 897
Query: 25 KPFEGEQL 2
KP + ++L
Sbjct: 898 KPIKVKEL 905
Score = 57.8 bits (138), Expect = 5e-07
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTC--ADSGKEAITLLKPP-HNFDACFMDIQMPE 221
+ +++VDDN N ++ G L VTC ADSGK A+ L++ FD +D QMPE
Sbjct: 648 RHMLIVDDNATNRRILRGMLATL--HVTCQEADSGKTALALMREQGSQFDCILLDAQMPE 705
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG+E + + L P+L +++ ++ +C ++ +
Sbjct: 706 MDGYELARHLHAEHPAL--------------------PPMLMLSSGALRGDALRCQEAGI 745
Query: 40 DGYVSKPFEGEQL 2
G+ +KP ++L
Sbjct: 746 AGFFAKPISSDEL 758
>dbj|BAC78687.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1145
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 936 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 994
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 995 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1038
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1039 SKPLRQNQL 1047
>dbj|BAC88576.1| two-component hybrid sensor and regulator [Gloeobacter violaceus PCC
7421]
ref|NP_923581.1| two-component hybrid sensor and regulator [Gloeobacter violaceus PCC
7421]
Length = 1387
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/136 (33%), Positives = 73/136 (53%)
Frame = -3
Query: 409 GSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQ 230
GS+L +++++VDD++ N+ AL++ G +V A++G + I LL+ D MD+
Sbjct: 1258 GSILAARKVLIVDDDVRNIFALTSALEREGMQVLYAENGSDGIALLERTPGIDMVLMDVM 1317
Query: 229 MPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLK 50
MP MDG+EAT IR VR PI+A+TA ++ E+CL+
Sbjct: 1318 MPGMDGYEATAAIRRQ-------------------VRFKELPIVALTAKAMRGDREKCLE 1358
Query: 49 SEMDGYVSKPFEGEQL 2
+ Y++KP + EQL
Sbjct: 1359 AGASDYITKPVDTEQL 1374
>gb|AAR29899.1| putative histidine kinase NIK1p [Cochliobolus heterostrophus]
Length = 1239
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>dbj|BAC78679.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>dbj|BAC78683.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>dbj|BAC78682.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>dbj|BAC78681.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>dbj|BAC78680.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDREKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>ref|ZP_00208565.1| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 416
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKK--RIIVVDDNIVNLK 350
N+++KPL S L LQ AL G K G+ LLH++ R+++ +DN+VN +
Sbjct: 22 NMLLKPLTPSRLFDGLQDALSG--KHTIMGGLAAGEAESVLLHRRGGRVLLAEDNLVNQE 79
Query: 349 VAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDL 170
VA L G +V A+ G+ A+ +D MD+QMP MDG +T+ IR + +
Sbjct: 80 VAVELLCAVGLDVDVAEDGQVALDKAAQGQ-YDVILMDMQMPNMDGLASTRAIRKLPNHV 138
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+TPILAMTA+ CL + M+ +++KP + E L
Sbjct: 139 -------------------KTPILAMTANAFDEDRNACLDAGMNDHIAKPVDPEAL 175
>dbj|BAE51443.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_422002.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 638
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DNI N KVAAG L + G VT A +G EA+ L+ NFD MD+QMPEMDG E
Sbjct: 403 ILLAEDNIFNQKVAAGLLNREGHRVTVACNGLEALDKLQD-ENFDLILMDMQMPEMDGPE 461
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR M P + PI+A+TA+ + +C + MDG+V+
Sbjct: 462 ATRRIRAM-------------PGPVASI-----PIIALTANAMAVDVARCRAAGMDGHVA 503
Query: 25 KPFE 14
KP +
Sbjct: 504 KPID 507
>ref|YP_432114.1| FOG: PAS/PAC domain [Hahella chejuensis KCTC 2396]
gb|ABC27689.1| FOG: PAS/PAC domain [Hahella chejuensis KCTC 2396]
Length = 1437
Score = 82.8 bits (203), Expect = 1e-14
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+ ASM+ + L C G N+ +G+ LH I++V+DN N +VA
Sbjct: 1140 LTKPVTASMVLEAASETLAQ----DCSRGNTDNAAIGARLHGMSILLVEDNPTNQQVAME 1195
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPH-NFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L+ GA V A G EA+ ++ FDA MDIQMP MDG+ AT+ IR
Sbjct: 1196 LLQSEGAGVQIAADGLEAVAAIQSAEVMFDAVLMDIQMPGMDGYAATREIRGK------- 1248
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
++ PI+AMTA+ + + E L M+ +V KPF+ + L
Sbjct: 1249 ------------LKMNALPIIAMTANAMFSDREAALAVGMNDHVGKPFDFDHL 1289
Score = 36.6 bits (83), Expect = 1.1
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = -3
Query: 406 SLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL------KPPHNFDAC 245
SL R++VVDDN +V G ++ +G A +G+E + + PHN
Sbjct: 1027 SLPKTLRVLVVDDNASAREVLKGIIESFGWVADIAVNGEEGVARVLEAAEASSPHNL--V 1084
Query: 244 FMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATH 65
+D MP ++G+ A + I+ Q G AP + + A T D ++
Sbjct: 1085 LIDWGMPGLNGWRAAELIKA-------QYPEGRAPLIMM--------VSAQTRDEME-RR 1128
Query: 64 EQCLKSEMDGYVSKP 20
S +D Y++KP
Sbjct: 1129 RLASPSIIDAYLTKP 1143
>dbj|BAD37547.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD37425.1| putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)]
Length = 946
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 12/138 (8%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEM 218
+K +I++V+DN VN+ VA L++ G + ++G EAI ++ +D MD+ MPEM
Sbjct: 793 NKAKILLVEDNKVNIMVAKSMLEQLGHGIDIVNNGLEAIRAIQK-RQYDIILMDVHMPEM 851
Query: 217 DGFEATKRIRVME---------RDLNEQIERG-EAPPECVGVRQW--RTPILAMTADVIQ 74
DG +ATK IR E + ++QI G + +C +++ R PI+AMTA+
Sbjct: 852 DGLQATKFIRSFENTGCWDTSVKPEHDQIIAGSDNLSDCAHMKKQGKRVPIIAMTANSFS 911
Query: 73 ATHEQCLKSEMDGYVSKP 20
+ E+CL + MD Y+SKP
Sbjct: 912 ESAEECLAAGMDSYISKP 929
>ref|YP_433554.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC29129.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 797
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/131 (38%), Positives = 77/131 (58%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
KK +++V+DN VN VA L+K G EV+ A++G++A+ L+ H +D MD MP MD
Sbjct: 666 KKHVLLVEDNQVNQLVAKTILRKLGYEVSIANNGQDALDLVGNDH-YDIILMDCHMPVMD 724
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
G+EAT+ IR Q + +A PI+A+TA+V+Q E+CL M+
Sbjct: 725 GYEATRLIR--------QNSKYDA-----------LPIIAVTANVMQGDKERCLSCGMND 765
Query: 34 YVSKPFEGEQL 2
Y++KP+E + L
Sbjct: 766 YLTKPYEKKAL 776
>ref|ZP_00317632.1| COG2202: FOG: PAS/PAC domain [Microbulbifer degradans 2-40]
Length = 1653
Score = 82.8 bits (203), Expect = 1e-14
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC---------FMD 236
RI++VDDN VN VA L+ +G + A++G EAI L DAC MD
Sbjct: 1398 RILLVDDNTVNQDVAKMMLEDFGLIIDVANNGLEAIAAL------DACSIREPYSLILMD 1451
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
QMPE+DG+E TKRIR D + + PI+AMTA+ ++ E+C
Sbjct: 1452 CQMPELDGYETTKRIRKGATDFDNT----------------KIPIIAMTANAMKGDKEKC 1495
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ + MD Y+SKP E + L
Sbjct: 1496 IAAGMDDYLSKPIEADAL 1513
>ref|ZP_00659124.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Nocardioides sp. JS614]
gb|EAO06092.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Nocardioides sp. JS614]
Length = 847
Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGI---DKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
KP++ S L+ +LQ +G LH G RI+VV+D +N VA
Sbjct: 692 KPVQLSRLRATLQDIIGTRRPHTPLHIPTTPAGRG---------RILVVEDGEINQLVAV 742
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
G L+ G AD+G A++ + +DA MD+QMP MDG++AT+ IR +E D++
Sbjct: 743 GILEHLGYTTDVADNGVTALSAMGRTR-YDAVLMDVQMPGMDGYQATREIRRLEGDVH-- 799
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKP 20
TPI+AMTA ++CL + MD Y+SKP
Sbjct: 800 ----------------HTPIIAMTASATNDDRDRCLAAGMDDYISKP 830
Score = 48.9 bits (115), Expect = 2e-04
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQMPE 221
R++VVDDN N + L +G V A+ G A+ L H FD +D+ MP+
Sbjct: 587 RVLVVDDNQTNRMILHDQLTAWGLHVDLAEDGPHALAALADAHRTHHPFDLAVLDLCMPD 646
Query: 220 MDGFEATKRI 191
MDG E RI
Sbjct: 647 MDGLELAHRI 656
>emb|CAA21950.1| histidine kinase [Candida albicans]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>ref|XP_716936.1| hypothetical protein CaO19_12648 [Candida albicans SC5314]
ref|XP_717003.1| hypothetical protein CaO19.5181 [Candida albicans SC5314]
gb|EAK98023.1| hypothetical protein CaO19.5181 [Candida albicans SC5314]
gb|EAK97953.1| hypothetical protein CaO19.12648 [Candida albicans SC5314]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>gb|AAC72284.1| Nik1p [Candida albicans]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>gb|AAC23929.1| histidine kinase [Candida albicans]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>dbj|BAA24952.1| homologue of histidine kinase [Candida albicans]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>dbj|BAE44787.1| hypothetical protein [Candida albicans]
ref|XP_888890.1| hypothetical protein CaJ7.0320 [Candida albicans SC5314]
Length = 1081
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN+VN K+A L+K G V ++G EA +K + +D MD+QMP M GF
Sbjct: 875 KILLAEDNLVNQKLAVRILEKQGHSVEVVENGLEAYEAIKR-NKYDVVLMDVQMPVMGGF 933
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT++IR E+ N + +RTPI+A+TA + E+ L MD YV
Sbjct: 934 EATEKIRQWEKKSNP-----------IDSLTFRTPIIALTAHAMLGDREKSLAKGMDDYV 982
Query: 28 SKPFEGEQL 2
SKP + + L
Sbjct: 983 SKPLKPKLL 991
>ref|ZP_00836035.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Shewanella sp. PV-4]
gb|EAP04105.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Shewanella sp. PV-4]
Length = 916
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/124 (41%), Positives = 68/124 (54%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
++ VDDN NLK+ LK+ +VT D+G+EA+ + K +FD FMDIQMP DGF
Sbjct: 671 VLAVDDNPANLKLIKTLLKELVTQVTVTDNGQEAVEIAKAK-SFDLIFMDIQMPGTDGFS 729
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
ATK+IR E LN TPI+A+TA I E+ +S MDGY+
Sbjct: 730 ATKQIR--EHSLNR-----------------NTPIVAVTAHAIAEERERIDQSGMDGYLP 770
Query: 25 KPFE 14
KP +
Sbjct: 771 KPID 774
>ref|ZP_00053728.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 512
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/124 (37%), Positives = 67/124 (54%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++ +DN VN K+ L ++G +VT A +G EAI L H FD MD+ MP +DG E
Sbjct: 394 VLLAEDNPVNQKLTTVLLNRWGQQVTLARNGAEAIAALARQH-FDLVLMDVHMPGIDGLE 452
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR M ++ R PI+AMTAD + CL++ MD YV+
Sbjct: 453 ATRRIRAMSGPVS------------------RIPIIAMTADALDGDAALCLEAGMDDYVA 494
Query: 25 KPFE 14
KP +
Sbjct: 495 KPVD 498
>ref|ZP_00105786.1| COG0784: FOG: CheY-like receiver [Nostoc punctiforme PCC 73102]
Length = 392
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/134 (33%), Positives = 73/134 (54%)
Frame = -3
Query: 403 LLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMP 224
LL K+ ++VDD++ N+ L++Y +V A++G+E I +L+ + D MD+ MP
Sbjct: 268 LLAGKKALIVDDDVRNIFALTSMLERYQIQVLYAENGREGINVLENTPDIDVVLMDVMMP 327
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
EMDG+E T IR NEQ + PI+A+TA +Q E+C+++
Sbjct: 328 EMDGYETTSLIR-----QNEQFK--------------SLPIIALTAKAMQGDREKCIEAG 368
Query: 43 MDGYVSKPFEGEQL 2
Y++KP + EQL
Sbjct: 369 ASDYITKPVDTEQL 382
Score = 38.1 bits (87), Expect = 0.38
Identities = 23/112 (20%), Positives = 50/112 (44%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KPL + ++ +L + G +++ K ++VV+D+
Sbjct: 101 LQKPLSSEIISEALVKIKGFVER-----------------QVKNLLVVEDDDTQRHSIVE 143
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVM 182
+ T +G EA+ ++ H FD +D+ +P+M GFE ++I+++
Sbjct: 144 LIGNSDVHTTAVATGAEALEAIRTKH-FDCLVLDLGLPDMTGFELIEQIKLL 194
Score = 36.6 bits (83), Expect = 1.1
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++V+D++ ++ +++G +V A +G + L + + A +DI+MPEMDG+
Sbjct: 6 LLIVEDDVNFARILIDMAQQHGFKVITAQNGSTGLALAQQFYP-SAVLLDIRMPEMDGWT 64
Query: 205 ATKRIR 188
R++
Sbjct: 65 VLDRLK 70
>ref|NP_719532.1| sensory transduction histidine kinase [Shewanella oneidensis MR-1]
gb|AAN56976.1| sensory transduction histidine kinase [Shewanella oneidensis MR-1]
Length = 1689
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/139 (36%), Positives = 80/139 (57%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFM 239
+TL + L +++V+DN +N ++A L++ GA VT A G+EA+TLL +FD M
Sbjct: 1328 TTLKNQLAGVELLLVEDNYLNQELAVELLRQAGARVTVAQHGQEALTLL-AQQSFDCVLM 1386
Query: 238 DIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQ 59
D QMP MDG+EAT+ IR A P+ + PI+AMTA+ + + E+
Sbjct: 1387 DGQMPVMDGYEATRLIR--------------AQPQFADL-----PIIAMTANAMDSDRER 1427
Query: 58 CLKSEMDGYVSKPFEGEQL 2
L + M+ ++KPF+ +QL
Sbjct: 1428 ALAAGMNAQINKPFQVQQL 1446
>ref|ZP_00953127.1| sensory box histidine kinase/response regulator [Oceanicaulis
alexandrii HTCC2633]
gb|EAP89820.1| sensory box histidine kinase/response regulator [Oceanicaulis
alexandrii HTCC2633]
Length = 546
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/127 (37%), Positives = 69/127 (54%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++V+DN +N V G L G T ++G++A+ LL+ FD MD++MP +DG
Sbjct: 413 RILLVEDNAMNRAVIEGFLNLRGWGCTICETGEQALELLQTD-GFDLILMDVRMPGLDGL 471
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
E T+RIR M + TPILA+TA+ ++ QCL++ MDGY
Sbjct: 472 EVTRRIRQMRSPVRA------------------TPILALTANALREEQAQCLRAGMDGYA 513
Query: 28 SKPFEGE 8
SKP + E
Sbjct: 514 SKPIQRE 520
>dbj|BAE52242.1| Sensor protein gacS [Magnetospirillum magneticum AMB-1]
ref|YP_422801.1| Sensor protein gacS [Magnetospirillum magneticum AMB-1]
Length = 1117
Score = 82.4 bits (202), Expect = 2e-14
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKK-RIIVVDDNIVNLKVAAGA 335
KPLR S L ++ R LG K+ RI+V +DN VN +VA G
Sbjct: 827 KPLRQSTLLDTIGRVLGLTGPAERPADHAEEYKASEPAAKRLRILVAEDNPVNQQVALGL 886
Query: 334 LKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIE 155
L+K G V G EA+ ++ +D MD+QMPEMDG EAT+ IR +
Sbjct: 887 LRKLGHTVDVVGDGAEALEAVRLLP-YDVVLMDVQMPEMDGLEATRAIRALP-------- 937
Query: 154 RGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ + PI+AMTA+ ++ + C + MDGY+SKP + +L
Sbjct: 938 ----------LAAAQVPIVAMTANAMRGDDQMCFDAGMDGYISKPIDRHKL 978
>gb|AAS97088.1| sensory box histidine kinase/response regulator [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
ref|YP_011828.1| sensory box histidine kinase/response regulator [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
Length = 1000
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/133 (38%), Positives = 70/133 (52%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
LH +++V+D+ VN AG L+K GA VT A +G+E + +FD MD+QMP
Sbjct: 869 LHGLNLLLVEDDPVNQLATAGLLRKSGARVTIAANGQEGLAAALSD-SFDCIIMDVQMPI 927
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG EAT+R+R R + TP++AMTA ++ E CL S M
Sbjct: 928 MDGIEATQRLRSDGRY----------------TARAATPVVAMTAHALEGDREMCLASGM 971
Query: 40 DGYVSKPFEGEQL 2
D YV+KP E L
Sbjct: 972 DTYVTKPATLESL 984
>ref|ZP_01074303.1| probable sensor/response regulator hybrid [Marinomonas sp. MED121]
gb|EAQ67304.1| probable sensor/response regulator hybrid [Marinomonas sp. MED121]
Length = 1317
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/124 (37%), Positives = 68/124 (54%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++V+DN +N VAAG LK GA V +SG EA++ L PH D MDIQMP+ DG++
Sbjct: 1197 LLLVEDNPINSLVAAGLLKHAGANVVSVESGVEALSYLSHPHKIDLILMDIQMPDFDGYQ 1256
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
+ IR NE + + PI+AMTA++ E CL+ M+ Y+
Sbjct: 1257 TSLVIR------NE--------------LESKLPIIAMTANIQADVIEHCLEVGMNAYIP 1296
Query: 25 KPFE 14
KPF+
Sbjct: 1297 KPFD 1300
Score = 48.9 bits (115), Expect = 2e-04
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KR+++VDD+ ++KV L + ++ +G EAI L P +++D +D +MP DG
Sbjct: 1015 KRVLIVDDDNRSIKVLEKQLMPFACDIDSVQTGLEAIAKLTPSNDYDLVILDYKMPAFDG 1074
Query: 211 FEATKRI 191
+ +++
Sbjct: 1075 LDVIEQV 1081
>ref|XP_503487.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79066.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 1147
Score = 82.4 bits (202), Expect = 2e-14
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Frame = -3
Query: 490 LQVSLQRALGGIDKLHCRNGVVGNSTLGSLLH-----------KKRIIVVDDNIVNLKVA 344
L++ L + C +GN L +L K +I++ +DN+VN K+A
Sbjct: 844 LKICLDLGITSYGNTPCSTNDIGNVLLPALESRAAPLNSDGQMKFQILLAEDNVVNQKLA 903
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
L+K+ V ++G EA +K +D MD+QMP M GFEAT +IR E+
Sbjct: 904 VRILEKHQHRVEVVENGYEAFEAIKKKR-YDVVLMDVQMPVMGGFEATAKIREWEK---- 958
Query: 163 QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
+ + +R RTPI+A+TA + E+C++++MD Y+SKP +
Sbjct: 959 ---------QNITIRT-RTPIVALTAHAMLGDRERCMQAQMDEYLSKPLK 998
>gb|ABA57772.1| Hybrid signal transduction histidine kinase and diguanylate
cyclase/phosphodiesterase [Nitrosococcus oceani ATCC
19707]
ref|YP_343302.1| Hybrid signal transduction histidine kinase and diguanylate
cyclase/phosphodiesterase [Nitrosococcus oceani ATCC
19707]
Length = 1499
Score = 82.4 bits (202), Expect = 2e-14
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Frame = -3
Query: 577 NPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLL 398
+P SS+ S + +N + KP++ S L + A+ +N + TL +
Sbjct: 607 HPASSISSLPGV-----VNYVAKPVQQSSLYNVIVSAVK-------QNEAAVSETLPVAI 654
Query: 397 HK-----KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDI 233
+ +RI+VV+DN VN +VA G L+++G V +G+EA+ + ++ MD
Sbjct: 655 EETEFSDRRILVVEDNRVNQQVAVGMLERFGCRVEVVSNGQEALDAI-ANKVYELVLMDC 713
Query: 232 QMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCL 53
MP+MDG+EAT+RIRV E N+Q+ PI+AMTA+V + ++C+
Sbjct: 714 HMPQMDGYEATRRIRVREAG-NKQV-----------------PIIAMTANVRKGDSDKCI 755
Query: 52 KSEMDGYVSKP 20
+ M+ Y+ KP
Sbjct: 756 SAGMNDYLPKP 766
>gb|ABA24293.1| GAF Sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
ref|YP_325188.1| GAF Sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
Length = 1917
Score = 82.0 bits (201), Expect = 2e-14
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
K++++VDD++ N+ L++Y +V A++G+E I+LL+ + D MD+ MPEMDG
Sbjct: 1797 KKVLIVDDDVRNIFALTSMLERYQMQVIYAENGREGISLLENTQDIDVVLMDVMMPEMDG 1856
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLKSEMDG 35
+E + IR E Q+R PI+A+TA +Q +QC+ +
Sbjct: 1857 YETMQLIRKKE--------------------QFRALPIIALTAKAMQGDRDQCIAAGASD 1896
Query: 34 YVSKPFEGEQL 2
Y++KP + EQL
Sbjct: 1897 YIAKPVDTEQL 1907
Score = 36.2 bits (82), Expect = 1.4
Identities = 16/66 (24%), Positives = 37/66 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++++D++ ++ +++G +V A +G + L K A +DI++PEMDG+
Sbjct: 1531 LLIIEDDVNFARILVDMARQHGFQVLSAQTGTAGLKLAKDFQPM-AILLDIRLPEMDGWT 1589
Query: 205 ATKRIR 188
R++
Sbjct: 1590 VLDRLK 1595
>ref|ZP_00763921.1| COG0642: Signal transduction histidine kinase [Vibrio sp. Ex25]
Length = 857
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/145 (32%), Positives = 73/145 (50%)
Frame = -3
Query: 436 NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN 257
NG+ + S H+ RI++ +DN++N K+A+ L K G + +G+EA+ +
Sbjct: 720 NGIPKSEYRTSRSHR-RILIAEDNLMNQKIASFFLDKAGYDYLITSNGQEALEAITKGEE 778
Query: 256 FDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVI 77
FDA MD MP MDG ATK IR E+ + +T I+A+TA V+
Sbjct: 779 FDAILMDCMMPVMDGLTATKEIRRWEKKAGRE----------------KTTIIALTASVL 822
Query: 76 QATHEQCLKSEMDGYVSKPFEGEQL 2
+ C + MD Y+ KP++ QL
Sbjct: 823 EEDIHNCFAAGMDAYLPKPYKSNQL 847
>ref|ZP_01114114.1| probable two-component sensor [Reinekea sp. MED297]
gb|EAR09821.1| probable two-component sensor [Reinekea sp. MED297]
Length = 767
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDGF 209
I+V +DN+VN KV G L K G VT G ++++ + P ++D MD +MP+MDG+
Sbjct: 646 ILVAEDNVVNQKVIEGLLVKLGHSVTVVPEGGQSVSERMNPEASYDLILMDCEMPKMDGY 705
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EATK IR Q E+ A P+ PI+A+TA + +CLK M+ ++
Sbjct: 706 EATKLIR--------QYEKANALPQ--------IPIVALTAHALDDVRRRCLKCGMNDFL 749
Query: 28 SKPFEGEQL 2
+KP +QL
Sbjct: 750 TKPINTQQL 758
>dbj|BAC78684.1| two-component histidine kinase [Cochliobolus heterostrophus]
Length = 1329
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++ +DN VN K+A L+KY VT A++G EA ++ +D MD+QMP M GF
Sbjct: 1120 QILLAEDNAVNQKLAVRILEKYHHRVTVANNGLEAFEHIQKKR-YDCVLMDVQMPVMGGF 1178
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT +IR ER+ G+ TP++A+TA + E+CL ++MD Y+
Sbjct: 1179 EATAKIREWEREN--------------GIPS--TPVIALTAHAMVGDCEKCLAAQMDDYL 1222
Query: 28 SKPFEGEQL 2
SKP QL
Sbjct: 1223 SKPLRQNQL 1231
>ref|ZP_00621624.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Silicibacter sp. TM1040]
gb|EAN56468.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Silicibacter sp. TM1040]
Length = 770
Score = 82.0 bits (201), Expect = 2e-14
Identities = 54/172 (31%), Positives = 87/172 (50%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
++KP+RA L+ + +ALG + R S ++ + ++++ +DN N V
Sbjct: 596 VLKPVRADDLRGVISQALGAGSAVEER--APSGSEDAKIMQRIKVLMAEDNRTNQVVVTR 653
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
LK ++ A +G+EAI + D MD+ MP MDG +ATK IR +E +
Sbjct: 654 MLKSESVDIIIASNGQEAIEMYLRERP-DVILMDMMMPVMDGLDATKAIRKIENE----- 707
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
GVRQ PI+A+TA+ +Q+ E CL+ MD ++SKP + L
Sbjct: 708 ---------TGVRQ--VPIIALTANALQSHEEACLEVGMDDFLSKPIRKQAL 748
Score = 41.2 bits (95), Expect = 0.045
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 382 IVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNF----DACFMDIQMPEMD 215
++VDD +N ++ L+ +G VT A S EA+ L + D F+D MP+ D
Sbjct: 494 LIVDDLELNRRILGERLRSWGLRVTEAASAMEAMLHLDEMRDATDTCDLIFLDYNMPDCD 553
Query: 214 GFEATKRIR 188
G+E RIR
Sbjct: 554 GYELALRIR 562
>gb|ABB38740.1| histidine kinase [Desulfovibrio desulfuricans G20]
ref|YP_388435.1| histidine kinase [Desulfovibrio desulfuricans G20]
Length = 647
Score = 81.6 bits (200), Expect = 3e-14
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRAL---GGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLK 350
V++KP+ S+L ++ AL + R + + L L ++VV+DN +N +
Sbjct: 246 VLLKPVARSLLLNTILDALPEYSSRPEQESRIIQIDTAQLRQELADTSVLVVEDNKINRQ 305
Query: 349 VAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDL 170
+A L+ G VT A G EA+ L++ ++FD FMDIQMP MDG EA +RIR
Sbjct: 306 IAKELLEGVGVRVTLAGDGLEALALVEN-YDFDLIFMDIQMPRMDGLEACRRIR------ 358
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
Q++ + P P++AMTA + E L++ M+ +++KP + ++L
Sbjct: 359 --QLQHKKQP-----------PVVAMTAHALAGDRETSLRAGMNDHITKPIDPDEL 401
Score = 46.2 bits (108), Expect = 0.001
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL-KPPHNFDACFMDIQMP 224
L R++V DDN + + L+ +VT A+SG+EA+ L+ K F +D +MP
Sbjct: 142 LEGTRVLVADDNFTSRAILKEVLESLRFDVTLAESGEEAVDLVQKTAEPFKVVLLDWRMP 201
Query: 223 EMDGFEATKRIRVME 179
+DG + IR ++
Sbjct: 202 GLDGLACARHIRQLD 216
>ref|ZP_00908721.1| PAS [Clostridium beijerincki NCIMB 8052]
gb|EAP60755.1| PAS [Clostridium beijerincki NCIMB 8052]
Length = 754
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/130 (36%), Positives = 73/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
K I+ V+DN+++ +V ++ G + A +G EAI +LK + D MDIQMPE++G
Sbjct: 634 KVILYVEDNLISQEVMENIIRSNGYKYISAYNGNEAINILKN-NKVDLILMDIQMPELNG 692
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
FE T+ IRV E + PI+A+TA ++ E+C+K++MD Y
Sbjct: 693 FETTQAIRVEELEGKH------------------IPIIAITAYAMREDKEKCIKAKMDDY 734
Query: 31 VSKPFEGEQL 2
+SKPFE E L
Sbjct: 735 ISKPFEIENL 744
>ref|ZP_00849255.1| PAS [Shewanella sp. ANA-3]
gb|EAP21312.1| PAS [Shewanella sp. ANA-3]
Length = 1626
Score = 81.6 bits (200), Expect = 3e-14
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Frame = -3
Query: 562 VKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRI 383
+ + HI +N + KP+ + +L ++ A+ G K N + L L +
Sbjct: 1234 IAESQHINNVPFVNFLTKPVTSQILAEAVLNAIEG--KTMDANPKPRSQRL---LAGLTL 1288
Query: 382 IVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDGFE 206
+VV+DN +N +V L GA V A+ G E +T +L FDA MD+QMP++DG E
Sbjct: 1289 LVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDIDGLE 1348
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR R +Q+ PILAMTA+ QA ++CL++ M+ +VS
Sbjct: 1349 ATRRIRADGRF--DQL-----------------PILAMTANASQADKQECLEAGMNAHVS 1389
Query: 25 KPFEGEQL 2
KP + +QL
Sbjct: 1390 KPIDMQQL 1397
Score = 47.0 bits (110), Expect = 8e-04
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKP----PHNFDACFMDIQMPE 221
RI+VVDDN + ++ + L YG V A G +AI +K FD MD +MP+
Sbjct: 1142 RILVVDDNQITTEILSKILSDYGCVVETASGGYQAIEKVKQATANAQQFDVVLMDWRMPD 1201
Query: 220 MDGFEATKRIR 188
+DG + + ++
Sbjct: 1202 IDGLQTAEMLK 1212
>gb|AAM35383.1| two-component system sensor protein [Xanthomonas axonopodis pv.
citri str. 306]
ref|NP_640847.1| two-component system sensor protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 769
Score = 81.6 bits (200), Expect = 3e-14
Identities = 52/129 (40%), Positives = 69/129 (53%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++V+DN VNL VA L G E A G+ A+ ++ +D FMD QMP +DG+
Sbjct: 498 RILLVEDNPVNLLVAQKLLAVLGFEADTATDGEAALARMESTR-YDMVFMDCQMPVLDGY 556
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+R R ME E G P PI+AMTA+ + E+CL + MD Y+
Sbjct: 557 AATRRWRAMET------ESGGRP----------VPIVAMTANAMAGDRERCLAAGMDDYL 600
Query: 28 SKPFEGEQL 2
SKP EQL
Sbjct: 601 SKPVAREQL 609
>gb|EAN29681.1| PAS [Magnetococcus sp. MC-1]
ref|ZP_00606024.1| PAS [Magnetococcus sp. MC-1]
Length = 1303
Score = 81.6 bits (200), Expect = 3e-14
Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Frame = -3
Query: 538 REYNLNVIMKPLRASMLQVSLQRAL---GGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDD 368
++ L + KPL S L + + L G + L V+ LL I++V+D
Sbjct: 904 KDKQLGHVQKPLTPSRLLEGMVQLLVDEGRVTGLSGETDVIARYK--PLLTGANILLVED 961
Query: 367 NIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIR 188
N VN +VA L G EVT AD+G +A++ L+ +FD MDIQMP MDG+ AT+ IR
Sbjct: 962 NGVNQEVAFELLSMVGVEVTVADNGSQALSFLEQA-SFDLVLMDIQMPVMDGYAATQAIR 1020
Query: 187 VMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGE 8
++++ + PI+AMTA V++A + L M+G+VSKP E
Sbjct: 1021 ---QNMSLTL-----------------PIIAMTATVMEADQARALAVGMNGHVSKPIEPH 1060
Query: 7 QL 2
+L
Sbjct: 1061 KL 1062
>ref|ZP_01109800.1| GGDEF domain protein [Alteromonas macleodii 'Deep ecotype']
gb|EAR05882.1| GGDEF domain protein [Alteromonas macleodii 'Deep ecotype']
Length = 1351
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN---FDACFMDIQMPEM 218
R+++V+DN +N VA L+ G V A++GKEA+ L+ P + MD QMPEM
Sbjct: 1227 RVLLVEDNAINQLVATTILEGEGLTVDVANNGKEALAFLQQPQQAKPYSLVVMDCQMPEM 1286
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DGFE TK IR G PI+A+TA+ +Q+ ++CL+S M+
Sbjct: 1287 DGFETTKHIR----------------SGAAGAHYQSIPIVAITANAMQSDKDKCLQSGMN 1330
Query: 37 GYVSKPFEGEQL 2
+++KP + E++
Sbjct: 1331 DFLTKPIDQEKV 1342
Score = 33.5 bits (75), Expect = 9.3
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -3
Query: 382 IVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAI----TLLKPPHNFDACFMDIQMPEMD 215
++VD N+ N +V L +G E + ADS K A+ LK +D +MP+M
Sbjct: 1075 LIVDSNVSNREVLKRQLNVWGVETSVADSSKGALAHCKASLKSSSPITLVIIDNKMPDMC 1134
Query: 214 G 212
G
Sbjct: 1135 G 1135
>emb|CAG91021.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_462511.1| hypothetical protein DEHA0G23628g [Debaryomyces hansenii CBS767]
Length = 1116
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/128 (37%), Positives = 70/128 (54%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN+VN K+A L+K G V ++G EA L+ +D MD+QMP M GFE
Sbjct: 867 ILLAEDNLVNQKLAVKILEKQGHHVEVVENGLEAFEALQKT-KYDVVLMDVQMPVMGGFE 925
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT++IR E+ N + +RTPI+A+TA + E+ L MD YVS
Sbjct: 926 ATEKIRQWEKKSNP-----------IDSLSFRTPIIALTAHAMLGDREKSLAKGMDDYVS 974
Query: 25 KPFEGEQL 2
KP + + L
Sbjct: 975 KPLKPKLL 982
>gb|AAO11010.1| Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
ref|NP_761483.1| Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
Length = 762
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/140 (33%), Positives = 71/140 (50%)
Frame = -3
Query: 421 NSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACF 242
N ++ +LL KRI+V +DN N V ++ G + A+ G EA+++ H++D F
Sbjct: 480 NDSVCTLLQGKRILVAEDNTANQMVIKAMFERLGVAIDLANDGYEAVSMASN-HHYDIIF 538
Query: 241 MDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHE 62
MDI MP DG +A K IR + +Q TPI+A+TA + E
Sbjct: 539 MDISMPGKDGMQACKEIRQLP-----------------DAKQAATPIIALTAHALYGDKE 581
Query: 61 QCLKSEMDGYVSKPFEGEQL 2
+ L+S M+GY+SKP L
Sbjct: 582 KFLRSGMNGYLSKPLRSRHL 601
>dbj|BAC94392.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
ref|NP_934421.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
Length = 762
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/140 (33%), Positives = 71/140 (50%)
Frame = -3
Query: 421 NSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACF 242
N ++ +LL KRI+V +DN N V ++ G + A+ G EA+++ H++D F
Sbjct: 480 NDSVCTLLQGKRILVAEDNTANQMVIKAMFERLGVAIDLANDGYEAVSMASN-HHYDIIF 538
Query: 241 MDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHE 62
MDI MP DG +A K IR + +Q TPI+A+TA + E
Sbjct: 539 MDISMPGKDGMQACKEIRQLP-----------------DAKQAATPIIALTAHALYGDKE 581
Query: 61 QCLKSEMDGYVSKPFEGEQL 2
+ L+S M+GY+SKP L
Sbjct: 582 KFLRSGMNGYLSKPLRSRHL 601
>ref|YP_433070.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC28645.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 957
Score = 81.3 bits (199), Expect = 4e-14
Identities = 54/140 (38%), Positives = 73/140 (52%)
Frame = -3
Query: 421 NSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACF 242
N+T G K ++ VDDN+ NLK+ L GA V A SG EA+T K FD F
Sbjct: 678 NATSG---RKPLVLAVDDNLANLKLVEAFLLDLGAVVETAMSGYEALTKAKQKR-FDVIF 733
Query: 241 MDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHE 62
MD+QMP MDG E T +IR + E G+ RTPI+A+TA + +
Sbjct: 734 MDVQMPGMDGVETTIKIR--------EFEAGKR----------RTPIIALTAHAMSEERK 775
Query: 61 QCLKSEMDGYVSKPFEGEQL 2
Q L+S D Y++KP ++L
Sbjct: 776 QLLQSGFDDYLTKPTNEDEL 795
>ref|XP_681214.1| hypothetical protein AN7945.2 [Aspergillus nidulans FGSC A4]
gb|EAA59599.1| hypothetical protein AN7945.2 [Aspergillus nidulans FGSC A4]
Length = 676
Score = 81.3 bits (199), Expect = 4e-14
Identities = 49/139 (35%), Positives = 73/139 (52%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFM 239
+T+ L+ R++ V+DN++N KV L+ G EVT A++G+EA+ L FD M
Sbjct: 545 ATMSKLVKGPRVLFVEDNVINQKVVCRKLRVSGFEVTTANNGQEALGLW-DSDKFDCILM 603
Query: 238 DIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQ 59
D +MP MDG AT+ IR ME++ I PIL +TA+V Q
Sbjct: 604 DQEMPVMDGNTATREIRAMEKEKGSHI-----------------PILGVTANVRQDQQAD 646
Query: 58 CLKSEMDGYVSKPFEGEQL 2
L + MDG + KP++ +L
Sbjct: 647 MLNAGMDGIIHKPYKMHEL 665
>gb|AAM39799.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAY47576.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|YP_241596.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|NP_635875.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 767
Score = 81.3 bits (199), Expect = 4e-14
Identities = 52/129 (40%), Positives = 70/129 (54%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++V+DN VNL VA L G E A G+ A++ ++ +D FMD QMP +DG+
Sbjct: 498 RILLVEDNPVNLLVAQKLLGVLGFEADTATDGEAALSSMESTR-YDMVFMDCQMPVLDGY 556
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+R R ME E G P PI+AMTA+ + E+CL + MD Y+
Sbjct: 557 AATRRWRAMET------ESGGRP----------IPIVAMTANAMAGDRERCLAAGMDDYL 600
Query: 28 SKPFEGEQL 2
SKP EQL
Sbjct: 601 SKPVAREQL 609
>gb|AAQ19474.1| histidine kinase G2 [Emericella nidulans]
Length = 659
Score = 81.3 bits (199), Expect = 4e-14
Identities = 49/139 (35%), Positives = 73/139 (52%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFM 239
+T+ L+ R++ V+DN++N KV L+ G EVT A++G+EA+ L FD M
Sbjct: 528 ATMSKLVKGPRVLFVEDNVINQKVVCRKLRVSGFEVTTANNGQEALGLW-DSDKFDCILM 586
Query: 238 DIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQ 59
D +MP MDG AT+ IR ME++ I PIL +TA+V Q
Sbjct: 587 DQEMPVMDGNTATREIRAMEKEKGSHI-----------------PILGVTANVRQDQQAD 629
Query: 58 CLKSEMDGYVSKPFEGEQL 2
L + MDG + KP++ +L
Sbjct: 630 MLNAGMDGIIHKPYKMHEL 648
>gb|EAN29403.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Magnetococcus sp. MC-1]
ref|ZP_00606247.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Magnetococcus sp. MC-1]
Length = 800
Score = 81.3 bits (199), Expect = 4e-14
Identities = 56/175 (32%), Positives = 90/175 (51%)
Frame = -3
Query: 526 LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
L+ + +PLR + L + L G++ V L SL +I+V +DN+VN ++
Sbjct: 634 LHTLERPLRLRPVLHKLDQLLHGVESTP-EPPVDEPQALPSL----QILVAEDNLVNQQI 688
Query: 346 AAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
AAG L + G A G +A+ L++ FD MD++MP+MDG EAT+ IR + +
Sbjct: 689 AAGYLTRLGHRYQFAKDGIQALNLVQKG-GFDLILMDVRMPDMDGLEATRHIRALPK--- 744
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
P C PI+A+TA+V + + C ++ MDG++ KP + QL
Sbjct: 745 ---------PWC------DIPIVALTANVFEQDRQNCREAGMDGFLPKPLDLSQL 784
>emb|CAJ22159.1| two-component system sensor protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
ref|YP_362259.1| two-component system sensor protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 769
Score = 81.3 bits (199), Expect = 4e-14
Identities = 52/129 (40%), Positives = 69/129 (53%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI++V+DN VNL VA L G E A G+ A+ ++ +D FMD QMP +DG+
Sbjct: 498 RILLVEDNPVNLLVAQKLLAVLGFEADTATDGEAALASMESTR-YDMVFMDCQMPVLDGY 556
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+R R ME E G P PI+AMTA+ + E+CL + MD Y+
Sbjct: 557 AATRRWRAMET------ESGGRP----------IPIVAMTANAMAGDRERCLAAGMDDYL 600
Query: 28 SKPFEGEQL 2
SKP EQL
Sbjct: 601 SKPVAREQL 609
>emb|CAG35088.1| probable two-component system sensory/regulatory protein (hybrid
family) [Desulfotalea psychrophila LSv54]
ref|YP_064095.1| two-component system sensory/regulatory protein (hybrid family)
[Desulfotalea psychrophila LSv54]
Length = 910
Score = 81.3 bits (199), Expect = 4e-14
Identities = 48/135 (35%), Positives = 77/135 (57%)
Frame = -3
Query: 406 SLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQM 227
SLL +I++VDDN +NL + L GAEVT A++G+E + L+ ++D MD+QM
Sbjct: 783 SLLEGLKILLVDDNEINLYMMEAILLAAGAEVTLAENGQECLERLE-ESSYDLILMDVQM 841
Query: 226 PEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKS 47
P +DG+E T+RIR E + PI+A+TA+ + E+C ++
Sbjct: 842 PVLDGYETTRRIRKDE-------------------KYRALPIIAITANALSDDIEKCFEA 882
Query: 46 EMDGYVSKPFEGEQL 2
M+ +V+KPF+ E+L
Sbjct: 883 GMNDHVAKPFKIEEL 897
>ref|ZP_01133429.1| probable sensor/response regulator hybrid [Pseudoalteromonas tunicata
D2]
gb|EAR28828.1| probable sensor/response regulator hybrid [Pseudoalteromonas tunicata
D2]
Length = 1483
Score = 81.3 bits (199), Expect = 4e-14
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+ ML ++ A+ + ++ + L KRI++V+DN N +A
Sbjct: 1095 LSKPVTRVMLLDAISDAIAAAQHTSLKTKLISHQ---QPLLNKRILLVEDNPTNQLIAKT 1151
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPH-NFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L GA A+ G++A+T L FD MDIQMP++DG+E T+ IR
Sbjct: 1152 LLDSQGANTVIANGGRQALTELDNSLLPFDLILMDIQMPDIDGYETTQLIRA-------- 1203
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ PILA+TA+V++ ++CL S M+G+++KPF+ E+L
Sbjct: 1204 -----------NTKYGNLPILAITANVMENDKKKCLASGMNGHIAKPFQLEEL 1245
Score = 44.7 bits (104), Expect = 0.004
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQ 230
H I++VDDN +L + A + G T A S ++ + L K FD +D +
Sbjct: 985 HLLNILIVDDNPTSLNILANTVHLLGCNATLAQSPEKGLALFKAALAKKPIFDLVLLDWK 1044
Query: 229 MPEMDGFEATKRIRVMERD 173
MP++DG++ ++IR D
Sbjct: 1045 MPDIDGWQLAEQIRQCTTD 1063
>gb|ABC23161.1| Multi-sensor Hybrid Histidine Kinase [Rhodospirillum rubrum ATCC
11170]
ref|YP_427448.1| Multi-sensor Hybrid Histidine Kinase [Rhodospirillum rubrum ATCC
11170]
Length = 1560
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITL-LKPPHNFDACFMDIQMPEMD 215
+R++VV+DN +N +VAA L GAE+ A+ G+ + + L+ +DA MDIQMP++D
Sbjct: 1285 RRLLVVEDNAINRQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDID 1344
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
GFEAT+RIR R PI+AMTA+ +A E CL + M
Sbjct: 1345 GFEATRRIR-------------------ADARFKALPIVAMTANASRADREACLAAGMTE 1385
Query: 34 YVSKPFE 14
+V KP +
Sbjct: 1386 HVGKPID 1392
>emb|CAI86697.1| putative sensor protein [Pseudoalteromonas haloplanktis TAC125]
ref|YP_340140.1| sensor protein [Pseudoalteromonas haloplanktis TAC125]
Length = 1019
Score = 80.9 bits (198), Expect = 5e-14
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Frame = -3
Query: 559 KSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGV-VGNSTLGSLLHKKRI 383
K + +F ++ L+++ KPL L G + + L + L +
Sbjct: 839 KQSKKVFPDH-LHILNKPLTQDEFSYKLASLFGASSEFVITPPKSLIEEPLDADLSAYHV 897
Query: 382 IVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLK--PPHNFDACFMDIQMPEMDGF 209
++VDDN++N++VA LK ++TCA G EA+ LK F+ MD QMP ++G+
Sbjct: 898 LLVDDNMINIEVAKAILKHTKVKITCASDGLEALEALKSNKQQPFNVILMDCQMPNLNGY 957
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
+ T IR + G+ PI+AMTA ++ E+CL + M+ Y+
Sbjct: 958 DTTSEIRNAK----------------AGIEYIHVPIIAMTASAMEGDRERCLTAGMNDYI 1001
Query: 28 SKPFEGEQL 2
+KP + + L
Sbjct: 1002 TKPIKPQTL 1010
>ref|YP_315026.1| Multi-sensor Hybrid Histidine Kinase [Thiobacillus denitrificans
ATCC 25259]
gb|AAZ97221.1| Multi-sensor Hybrid Histidine Kinase [Thiobacillus denitrificans
ATCC 25259]
Length = 781
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/130 (36%), Positives = 69/130 (53%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+R+++V+DN VN +VA L K G T A G+EA+ L+ FDA MD QMP MDG
Sbjct: 521 ERVLLVEDNPVNQQVAQAMLAKLGLATTVASDGREAVDLV-ASRAFDAVLMDCQMPVMDG 579
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
+EAT+ IR + R P++A+TA+ + ++CL S MD +
Sbjct: 580 YEATRAIRRLPGA--------------------RLPVIALTANALHGDRQKCLDSGMDDF 619
Query: 31 VSKPFEGEQL 2
+ KP+ QL
Sbjct: 620 LPKPYSLAQL 629
>dbj|BAE50760.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
ref|YP_421319.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 514
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/128 (37%), Positives = 67/128 (52%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++ +DN VN K+ L ++G VT A +G EAI + H FD MD+ MP +DG E
Sbjct: 396 VLLAEDNPVNQKLTTTLLDRWGQRVTLARNGAEAIAAVARDH-FDLVLMDVHMPGIDGLE 454
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR M + + PI+AMTADV+ CL + MD YV+
Sbjct: 455 ATRRIRAMSGPVA------------------KIPIIAMTADVMDGDAALCLDAGMDDYVA 496
Query: 25 KPFEGEQL 2
KP E +L
Sbjct: 497 KPVEPTRL 504
>ref|ZP_01074274.1| serine/threonine kinase with two-component sensor domain [Marinomonas
sp. MED121]
gb|EAQ67275.1| serine/threonine kinase with two-component sensor domain [Marinomonas
sp. MED121]
Length = 2128
Score = 80.9 bits (198), Expect = 5e-14
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++V+DN +N +VA G LK+ ++ A +G EAI L + +D FMDIQMP +DGF
Sbjct: 1772 KILLVEDNPLNRQVAQGLLKESLLDIDLATNGLEAIEKLSN-NEYDLVFMDIQMPILDGF 1830
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLKSEMDGY 32
ATKRIR E P +W++ PI+AMTA + ++CL+ M+ Y
Sbjct: 1831 SATKRIR-------------EKP-------EWKSLPIIAMTAHATDSDRDKCLQVGMNDY 1870
Query: 31 VSKPFEGEQL 2
+SKP + +L
Sbjct: 1871 ISKPIDPNKL 1880
>gb|ABA24376.1| Multi-sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
ref|YP_325271.1| Multi-sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
Length = 1195
Score = 80.9 bits (198), Expect = 5e-14
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = -3
Query: 403 LLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMP 224
+L ++I+++DD++ N+ L+ Y +V A++G++ I LL+ + +A MD+ MP
Sbjct: 1071 ILANRKILIIDDDLRNIFAITSLLESYQMQVLFAENGRDGIELLQANSDINAVLMDVMMP 1130
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLKS 47
EMDG+E T+ IR +Q+RT PI+A+TA + E+C+++
Sbjct: 1131 EMDGYETTRSIRQQ--------------------KQFRTLPIIALTAKAMPGDREKCIEA 1170
Query: 46 EMDGYVSKPFEGEQL 2
Y++KP + EQL
Sbjct: 1171 GASDYITKPVDTEQL 1185
Score = 36.6 bits (83), Expect = 1.1
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KR++V++D+ V + + + ++G A+ +L+ H FD +D+ +P+M G
Sbjct: 929 KRLLVIEDDPVQAQSIIELIGNGDVQSMAVNTGAAALEILRSQH-FDCIVLDLGLPDMSG 987
Query: 211 FEATKRIR 188
E ++I+
Sbjct: 988 LELLEQIK 995
>dbj|BAC62572.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
ref|NP_800739.1| hypothetical protein VPA1229 [Vibrio parahaemolyticus RIMD 2210633]
Length = 882
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/130 (34%), Positives = 69/130 (53%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI++ +DN++N K+A+ L K G + +G+EA+ + FDA MD MP MDG
Sbjct: 759 RRILIAEDNLMNQKIASFFLDKAGYDYLITSNGQEALDAITKGEQFDAILMDCMMPVMDG 818
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
ATK IR E+ VG + +T I+A+TA V++ C + MD Y
Sbjct: 819 LTATKEIRRWEKK--------------VGCK--KTTIIALTASVLEEDIHNCFAAGMDAY 862
Query: 31 VSKPFEGEQL 2
+ KP++ QL
Sbjct: 863 LPKPYKSNQL 872
>gb|AAG07499.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
ref|NP_252801.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
Length = 1417
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDG 212
R++VV+DN +N +VAA L GA V AD G + +L+ FDA MD+QMP++DG
Sbjct: 1159 RLLVVEDNALNRQVAAELLSSEGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDG 1218
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EAT+RIR R PILAMTA+ A E CL + M+ +
Sbjct: 1219 LEATRRIRADGRFAG-------------------LPILAMTANASLADREACLAAGMNDH 1259
Query: 31 VSKPFEGEQL 2
V+KP + E+L
Sbjct: 1260 VAKPIDKERL 1269
Score = 47.4 bits (111), Expect = 6e-04
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQMPE 221
R++V DDN+V ++ + G C SG EA+ ++ +D MD +MP+
Sbjct: 1010 RLLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPD 1069
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTAD 83
+DG A + IR ++ DL PP + + + +LA D
Sbjct: 1070 LDGLSAAQLIRQLQGDL--------PPPMVIMITAYGREVLADARD 1107
>ref|ZP_00137562.2| COG2202: FOG: PAS/PAC domain [Pseudomonas aeruginosa UCBPP-PA14]
Length = 1417
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDG 212
R++VV+DN +N +VAA L GA V AD G + +L+ FDA MD+QMP++DG
Sbjct: 1159 RLLVVEDNALNRQVAAELLSSEGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDG 1218
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EAT+RIR R PILAMTA+ A E CL + M+ +
Sbjct: 1219 LEATRRIRADGRFAG-------------------LPILAMTANASLADREACLAAGMNDH 1259
Query: 31 VSKPFEGEQL 2
V+KP + E+L
Sbjct: 1260 VAKPIDKERL 1269
Score = 47.4 bits (111), Expect = 6e-04
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQMPE 221
R++V DDN+V ++ + G C SG EA+ ++ +D MD +MP+
Sbjct: 1010 RLLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPD 1069
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTAD 83
+DG A + IR ++ DL PP + + + +LA D
Sbjct: 1070 LDGLSAAQLIRQLQGDL--------PPPMVIMITAYGREVLADARD 1107
>ref|ZP_00973288.1| COG2202: FOG: PAS/PAC domain [Pseudomonas aeruginosa 2192]
Length = 1417
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDG 212
R++VV+DN +N +VAA L GA V AD G + +L+ FDA MD+QMP++DG
Sbjct: 1159 RLLVVEDNALNRQVAAELLSSEGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDG 1218
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EAT+RIR R PILAMTA+ A E CL + M+ +
Sbjct: 1219 LEATRRIRADGRFAG-------------------LPILAMTANASLADREACLAAGMNDH 1259
Query: 31 VSKPFEGEQL 2
V+KP + E+L
Sbjct: 1260 VAKPIDKERL 1269
Score = 47.4 bits (111), Expect = 6e-04
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQMPE 221
R++V DDN+V ++ + G C SG EA+ ++ +D MD +MP+
Sbjct: 1010 RLLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPD 1069
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTAD 83
+DG A + IR ++ DL PP + + + +LA D
Sbjct: 1070 LDGLSAAQLIRQLQGDL--------PPPMVIMITAYGREVLADARD 1107
>ref|ZP_00967483.1| COG2202: FOG: PAS/PAC domain [Pseudomonas aeruginosa C3719]
Length = 1417
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDG 212
R++VV+DN +N +VAA L GA V AD G + +L+ FDA MD+QMP++DG
Sbjct: 1159 RLLVVEDNALNRQVAAELLSSEGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDG 1218
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EAT+RIR R PILAMTA+ A E CL + M+ +
Sbjct: 1219 LEATRRIRADGRFAG-------------------LPILAMTANASLADREACLAAGMNDH 1259
Query: 31 VSKPFEGEQL 2
V+KP + E+L
Sbjct: 1260 VAKPIDKERL 1269
Score = 47.4 bits (111), Expect = 6e-04
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQMPE 221
R++V DDN+V ++ + G C SG EA+ ++ +D MD +MP+
Sbjct: 1010 RLLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPD 1069
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTAD 83
+DG A + IR ++ DL PP + + + +LA D
Sbjct: 1070 LDGLSAAQLIRQLQGDL--------PPPMVIMITAYGREVLADARD 1107
>ref|ZP_00908717.1| PAS [Clostridium beijerincki NCIMB 8052]
gb|EAP60751.1| PAS [Clostridium beijerincki NCIMB 8052]
Length = 669
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/130 (35%), Positives = 70/130 (53%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KRI++V+DN +N+K+ L + G E GK+A+ LK + FD MDIQMPE++G
Sbjct: 550 KRILLVEDNEINIKITCEMLNRLGYEYEYVYDGKQALEKLKE-NTFDLILMDIQMPELNG 608
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
++ T+ IR E E + I+AMTA + E+C++ MD Y
Sbjct: 609 YDTTRIIREKEIKTKEHVN-----------------IIAMTAYSMNGDRERCIEVGMDDY 651
Query: 31 VSKPFEGEQL 2
+SKPF+ +L
Sbjct: 652 ISKPFDMNKL 661
>ref|ZP_01166609.1| histidine kinase response regulator hybrid protein [Oceanospirillum
sp. MED92]
gb|EAR61283.1| histidine kinase response regulator hybrid protein [Oceanospirillum
sp. MED92]
Length = 670
Score = 80.5 bits (197), Expect = 7e-14
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+++VV+DN VN VA G L+K G EV A++G +T L+ + +D FMD MP M GF
Sbjct: 420 KVLVVEDNRVNQIVAKGVLEKLGLEVELAENGAVGMTKLRDNY-YDLVFMDCHMPVMSGF 478
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EATK IR P + V PI+AM+A+ + EQC + MDG+
Sbjct: 479 EATKGIR---------------SPNSL-VHNPGIPIIAMSANAMDTDIEQCYEVGMDGFT 522
Query: 28 SKPFEGEQL 2
+KP E E++
Sbjct: 523 AKPLEREKI 531
>ref|ZP_00316939.1| COG0784: FOG: CheY-like receiver [Microbulbifer degradans 2-40]
Length = 569
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL-KPPHNFDACFMDIQMPEMDG 212
+I++VDDN VN +V G L+ ++ A +G++A+ L + NFD MD QMP MDG
Sbjct: 297 KILLVDDNAVNREVILGILEDEDFQIETAVNGQDALAALTRSSLNFDLILMDCQMPVMDG 356
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
++AT+ IR E + PI+A+TA+ + E CL S M Y
Sbjct: 357 YKATREIRSSE----------------ILKHYKHIPIIALTANAMAGDKETCLASGMSDY 400
Query: 31 VSKPFEGEQL 2
+SKP +GEQL
Sbjct: 401 LSKPIDGEQL 410
>dbj|BAB73078.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_485164.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 1932
Score = 80.5 bits (197), Expect = 7e-14
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
K++++VDD++ N+ L++Y +V A++G+E I+LL+ + D MD+ MPEMDG
Sbjct: 1812 KKVLIVDDDVRNIFALTSMLERYQMQVIYAENGREGISLLENTSDIDVVLMDVMMPEMDG 1871
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLKSEMDG 35
+E + IR E Q++ PI+A+TA +Q +QC+ +
Sbjct: 1872 YETMQLIRKKE--------------------QFKALPIIALTAKAMQGDRDQCIAAGASD 1911
Query: 34 YVSKPFEGEQL 2
Y++KP + EQL
Sbjct: 1912 YIAKPVDTEQL 1922
Score = 37.4 bits (85), Expect = 0.65
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++++D++ ++ +++G +V A SG + L K A +DI++PEMDG+
Sbjct: 1546 LLIIEDDVNFARILVDMARQHGFQVLTAQSGTAGLKLAKDFQPM-AILLDIRLPEMDGWT 1604
Query: 205 ATKRIR 188
R++
Sbjct: 1605 VLDRLK 1610
>ref|YP_476201.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
gb|ABD00938.1| sensory box histidine kinase/response regulator [Cyanobacteria
bacterium Yellowstone A-Prime]
Length = 1523
Score = 80.5 bits (197), Expect = 7e-14
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG---GIDKLHCRNGVVGNSTLGSLLHKK---RIIVVDDNIVN 356
+ KP++ + LQ +L ALG G+ G + + S + RI++ +DN VN
Sbjct: 1202 LTKPVKQTRLQEALVMALGKSSGLATSLLGMGPPLSQSAPSASRPQQPLRILLAEDNPVN 1261
Query: 355 LKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMER 176
KVA L+ G +G+E + LL+ +D MD QMP MDG+EAT+R+R ER
Sbjct: 1262 QKVALRQLQSLGYMADVVANGQEVLDLLQRVQ-YDLILMDCQMPVMDGYEATRRLRQQER 1320
Query: 175 DLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
RT ++A+TA+ +Q E+CL++ MD Y+SKP E L
Sbjct: 1321 GSGH-----------------RTVVIAITANAMQEDRERCLQAGMDDYLSKPVLKEDL 1361
Score = 40.4 bits (93), Expect = 0.076
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDI 233
L KR++VVDDN N K+ +G V A++ +A+ L+ F +D+
Sbjct: 1094 LQGKRLLVVDDNATNRKIVRYQATAWGMVVEEAENAYQALDKLRQAAREGIPFPLAVLDM 1153
Query: 232 QMPEMDG 212
QMPE+DG
Sbjct: 1154 QMPEVDG 1160
>ref|ZP_00818428.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
gb|EAO98310.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Marinobacter
aquaeolei VT8]
Length = 784
Score = 80.5 bits (197), Expect = 7e-14
Identities = 45/131 (34%), Positives = 71/131 (54%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
+ R+++V+DN VN + L+K G EV A+ G+ A +L + H FD FMD MP MD
Sbjct: 657 RMRVLLVEDNPVNRTLTRRLLEKLGCEVMTANDGQAASSLWQW-HQFDVVFMDCVMPRMD 715
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
G+EAT+++R E + R P++A+TA ++ E+C ++ MD
Sbjct: 716 GYEATRQLRAWETNHGRS----------------RVPVVALTASAMEEDEERCRQAGMDS 759
Query: 34 YVSKPFEGEQL 2
+V+KP E L
Sbjct: 760 FVAKPVNLEML 770
>ref|YP_314745.1| Multi-sensor Hybrid Histidine Kinase [Thiobacillus denitrificans
ATCC 25259]
gb|AAZ96940.1| Multi-sensor Hybrid Histidine Kinase [Thiobacillus denitrificans
ATCC 25259]
Length = 846
Score = 80.1 bits (196), Expect = 9e-14
Identities = 50/124 (40%), Positives = 68/124 (54%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI+VV+D+ VN KV A L+ G + T A SG+EA+ L +FD MD QMPEMDG
Sbjct: 610 RILVVEDHPVNQKVLAHQLRAMGLQYTLAASGREALERLGSA-DFDLVLMDWQMPEMDGL 668
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT+RIR + R RTP++A+TA+ E CL + + Y+
Sbjct: 669 EATRRIRQLPG------------------RAGRTPVVALTANASVGFREACLAAGANDYL 710
Query: 28 SKPF 17
SKP+
Sbjct: 711 SKPY 714
>dbj|BAA17992.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
ref|NP_441312.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
Length = 1261
Score = 80.1 bits (196), Expect = 9e-14
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Frame = -3
Query: 523 NVIMKPLRASMLQVSLQRALGG----IDKLHCRNGVVGNSTLGSLLHK---KRIIVVDDN 365
+V++KP+ S+L SL R LG ++ +G+ L + RI++V+DN
Sbjct: 874 DVLVKPISPSVLFDSLARVLGDPTALAQEMRQSSGIGAEDLALEKLRRIRGARILLVEDN 933
Query: 364 IVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRV 185
+N +VAA L+ G V A +G A+ L + + MD+QMPEMDG EAT IR
Sbjct: 934 EINQEVAAELLRDVGFNVDVAANGLIALERLNN-NAYALVLMDMQMPEMDGIEATIAIRQ 992
Query: 184 MERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQ 5
R + PI+AMTA+V+Q E+CL++ M+ ++ KP E E+
Sbjct: 993 -------------------NPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEE 1033
Query: 4 L 2
L
Sbjct: 1034 L 1034
Score = 47.4 bits (111), Expect = 6e-04
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL----KPPHNFDACFMDI 233
L KR++VVDDN V L++ V +SG EA+ L + H F+D
Sbjct: 768 LEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDW 827
Query: 232 QMPEMDGFEATKRIRVMERDLNEQ 161
QMP MDG E +R++ M LN Q
Sbjct: 828 QMPNMDGLEVARRLKAM--GLNHQ 849
>gb|AAY93499.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Pf-5]
ref|YP_261335.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Pf-5]
Length = 773
Score = 80.1 bits (196), Expect = 9e-14
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR--IIVVDDNIVNLKVAAG 338
+PL + L +L+R+L G + ++ L + ++R I++V+DN VN VA G
Sbjct: 614 RPLARNALYQTLRRSLLG------ETITLNDAQLEMPVQRRRADILLVEDNPVNQLVAKG 667
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L K G VT A G EA+ L+ H FD MD MP MDG+EA+++IR
Sbjct: 668 MLSKLGCAVTVAAHGAEALNQLEL-HRFDLVLMDCNMPVMDGYEASRQIR---------- 716
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
G P PI+A+TA+ + E+C + M Y++KPF E+L
Sbjct: 717 RSGRWPD---------LPIIALTANAMPEERERCRAAGMSDYLAKPFRREEL 759
>gb|ABB23193.1| PAS/PAC sensor hybrid histidine kinase [Pelodictyon luteolum DSM 273]
ref|YP_374236.1| PAS/PAC sensor hybrid histidine kinase [Pelodictyon luteolum DSM 273]
Length = 967
Score = 80.1 bits (196), Expect = 9e-14
Identities = 52/148 (35%), Positives = 75/148 (50%)
Frame = -3
Query: 463 GGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEA 284
GGI K + G S S ++VV+D++VN VA LKK G A G A
Sbjct: 686 GGIGKADQKAARSGASQPPSAASPLNVLVVEDSMVNRNVAVSMLKKLGYSPDVAVCGTAA 745
Query: 283 ITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTP 104
+ ++ +D FMD QMPEMDG+EAT+ IR E + G R P
Sbjct: 746 LEAMRRKA-YDLVFMDCQMPEMDGYEATRHIREDE--------------DLKGSRS--VP 788
Query: 103 ILAMTADVIQATHEQCLKSEMDGYVSKP 20
++AMTA+ ++ E+C+ + MD Y++KP
Sbjct: 789 VVAMTANAMKGDREKCINAGMDDYIAKP 816
>ref|ZP_00310815.1| COG0784: FOG: CheY-like receiver [Cytophaga hutchinsonii]
Length = 1158
Score = 80.1 bits (196), Expect = 9e-14
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Frame = -3
Query: 403 LLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTC--ADSGKEAITLLKPPHNFDACFMDIQ 230
+L K+++VVDD+I N+ AL++ E+TC A++GK A+ +L + + MDI
Sbjct: 1034 ILKSKKVLVVDDDIRNVYSLTNALEE--EEMTCFIAENGKIALQVLTENPSIEIVLMDIM 1091
Query: 229 MPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLK 50
MPEMDG+EATK IR M Q + + PI+A+TA ++ E+CL
Sbjct: 1092 MPEMDGYEATKAIRNM-----PQFD--------------KIPIIAITAKAMKGDREKCLA 1132
Query: 49 SEMDGYVSKPFEGEQL 2
+ M Y+SKP EQL
Sbjct: 1133 AGMSDYISKPINMEQL 1148
Score = 35.8 bits (81), Expect = 1.9
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Frame = -3
Query: 391 KRIIVVDDN-----IVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQM 227
K+++VV+DN + V G +K Y A +GKEA +L +D +D+ +
Sbjct: 892 KKLLVVEDNETQNTAIRELVGNGDVKSYSAY-----TGKEAYEMLLKDE-YDCIIVDLGL 945
Query: 226 PEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKS 47
P+M GF DL EQI+ PE G+ PI+ T + A + L
Sbjct: 946 PDMSGF-----------DLIEQIKE---KPEIKGI-----PIIVYTGRDLTADEKNLLNK 986
Query: 46 EMDGYVSKPFEGEQ 5
V K ++
Sbjct: 987 LASAVVLKTANSQE 1000
>dbj|BAB73582.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_485923.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 1194
Score = 80.1 bits (196), Expect = 9e-14
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Frame = -3
Query: 406 SLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQM 227
++L ++I+++DD++ N+ L+ Y +V A++G++ I +L+ + +A MD+ M
Sbjct: 1069 TILANRKILIIDDDLRNIFAITSLLESYQMQVLFAENGRDGIDILQANPDINAVLMDVMM 1128
Query: 226 PEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRT-PILAMTADVIQATHEQCLK 50
PEMDG+E T+ IR +Q+RT PI+A+TA + E+C++
Sbjct: 1129 PEMDGYETTRSIRQQ--------------------KQFRTLPIIALTAKAMPGDREKCIE 1168
Query: 49 SEMDGYVSKPFEGEQL 2
+ Y++KP + EQL
Sbjct: 1169 AGASDYITKPVDTEQL 1184
Score = 35.4 bits (80), Expect = 2.5
Identities = 16/68 (23%), Positives = 37/68 (54%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KR++V++D+ V + + + ++G A+ +L+ H FD +D+ +P+M G
Sbjct: 928 KRLLVIEDDPVQAQSIIELIGNGDVQSIAVNTGAAALDILRSQH-FDCIVLDLGLPDMSG 986
Query: 211 FEATKRIR 188
+ ++I+
Sbjct: 987 LQLLEQIK 994
>gb|AAN49740.1| two-component hybrid sensor and regulator [Leptospira interrogans
serovar Lai str. 56601]
ref|NP_712722.1| two-component hybrid sensor and regulator [Leptospira interrogans
serovar Lai str. 56601]
Length = 935
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++V+DN++N K+A L K G A +G E I LK N+D FMDIQMPE+DG+
Sbjct: 817 QILLVEDNVINQKIALRLLTKLGYNADSALNGLEGIEKLKTK-NYDLIFMDIQMPEIDGY 875
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
E T +IR + G++ P I+AMTA+ ++ E+CL++ M+ Y+
Sbjct: 876 ETTFQIRK---------DFGKSKP----------VIVAMTANAMEGDREKCLEAGMNAYI 916
Query: 28 SKPFE 14
SKP +
Sbjct: 917 SKPIQ 921
>gb|AAM89215.1| hybrid histidine kinase [Tritrichomonas foetus]
Length = 1547
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/130 (36%), Positives = 69/130 (53%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
++I+VV+DN N V L+ G + A++GKEAI L+ FD FMD QMP +DG
Sbjct: 1426 QKILVVEDNKTNQFVMKKILQNIGCPMRIAENGKEAIDALEQ-EEFDLIFMDCQMPVLDG 1484
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EATK IR +++ + PI+A+TA ++ E C K+ MD Y
Sbjct: 1485 IEATKIIRSCDKNYSS------------------IPIIALTASAVEGDEETCRKAGMDAY 1526
Query: 31 VSKPFEGEQL 2
+SKP +Q+
Sbjct: 1527 LSKPVRIQQI 1536
>ref|YP_001394.1| histidine kinase response regulator hybrid protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gb|AAS70031.1| histidine kinase response regulator hybrid protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 1017
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++V+DN++N K+A L K G A +G E I LK N+D FMDIQMPE+DG+
Sbjct: 899 QILLVEDNVINQKIALRLLTKLGYNADSALNGLEGIEKLKTK-NYDLIFMDIQMPEIDGY 957
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
E T +IR + G++ P I+AMTA+ ++ E+CL++ M+ Y+
Sbjct: 958 ETTFQIRK---------DFGKSKP----------VIVAMTANAMEGDREKCLEAGMNAYI 998
Query: 28 SKPFE 14
SKP +
Sbjct: 999 SKPIQ 1003
>gb|AAZ98829.1| cytokinin independent 2 [Arabidopsis thaliana]
Length = 922
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
K +I++V+DN +N+ VA +K+ G + A++G EAIT + ++D MD+ MP +D
Sbjct: 777 KPKILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAINSS-SYDLVLMDVCMPVLD 835
Query: 214 GFEATKRIRVMER--DLNEQIERG----EAPPECVGVRQW-RTPILAMTADVIQATHEQC 56
G +AT+ IR E + N IE G + E V +R R PI+AMTA+ + + E+C
Sbjct: 836 GLKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTANTLAESSEEC 895
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ MD ++SKP ++L
Sbjct: 896 YANGMDSFISKPVTLQKL 913
>ref|ZP_00676542.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO38136.1| PAS [Pelobacter propionicus DSM 2379]
Length = 944
Score = 79.7 bits (195), Expect = 1e-13
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = -3
Query: 439 RNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL-KPP 263
RNG S L L ++VV+DN +N ++A L + GA V A SG++ + L+ +
Sbjct: 596 RNGAGQRSRLKGL----HLLVVEDNPINRQIAQELLSQEGAGVEVASSGRQGLDLIARAQ 651
Query: 262 HNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTAD 83
FDA MDIQMP+MDG+ A++RIR + +G+ PI+AMTA+
Sbjct: 652 APFDAVLMDIQMPDMDGYSASRRIR-----------------DALGM--INLPIIAMTAN 692
Query: 82 VIQATHEQCLKSEMDGYVSKPFEGEQL 2
+ +C + MDG+++KP + E L
Sbjct: 693 ALPDDRRRCHAAGMDGHIAKPIDPETL 719
>ref|NP_901251.1| probable sensor/response hybrid [Chromobacterium violaceum ATCC
12472]
gb|AAQ59257.2| probable sensor/response hybrid [Chromobacterium violaceum ATCC
12472]
Length = 664
Score = 79.7 bits (195), Expect = 1e-13
Identities = 49/129 (37%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN+VN ++A L+ G EV A +G+EA+ L + FD MD +MP MDG+
Sbjct: 410 RVLLVEDNLVNQELATAMLRNLGCEVELARNGEEALRLCE-AGGFDLALMDCEMPVMDGW 468
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
+AT IR ER G A R I+A+TA+ E+CL++ MD Y+
Sbjct: 469 QATGAIRARERP-------GGA----------RLTIVALTANAGLGERERCLQAGMDDYL 511
Query: 28 SKPFEGEQL 2
SKPF +L
Sbjct: 512 SKPFTQNEL 520
Score = 44.3 bits (103), Expect = 0.005
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
+ R++V+DDN+ NL++ L + V +EA+ L + D D+ MPEMD
Sbjct: 270 RMRVLVLDDNVTNLEILEQQLASWHCRVAAFHRPREALDWLTAGNEVDLIISDMMMPEMD 329
Query: 214 GFEATKRIRVMERDLNEQIER-GEAPPECVGVRQWRTPILAMTADVIQ 74
G L E ER GEA P + IL+ AD Q
Sbjct: 330 GL----------MFLGEARERLGEAAPPAI--------ILSSAADDFQ 359
>ref|ZP_00583064.1| PAS [Shewanella baltica OS155]
gb|EAN42495.1| PAS [Shewanella baltica OS155]
Length = 1784
Score = 79.7 bits (195), Expect = 1e-13
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG--GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
I KP+ AS L + A+G GI + R + L L KRI++V+DN +NL+VA
Sbjct: 1394 ISKPISASRLLDGIMNAIGREGILPVRRRTEELAPQLLVPL-QGKRILLVEDNEMNLEVA 1452
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
+ L++ G ++ A +G+ A+ L H FD MD QMP MDG++AT+ IR
Sbjct: 1453 SEFLEQVGIILSIATNGQIALDKLSQQH-FDLVLMDCQMPVMDGYQATQAIR-------- 1503
Query: 163 QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
PE + P++AMTA+ + + C+++ M+ +++KP E
Sbjct: 1504 ------KRPELANL-----PVVAMTANAMAGDRDMCIRAGMNDHIAKPIE 1542
Score = 49.3 bits (116), Expect = 2e-04
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = -3
Query: 451 KLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT-- 278
KLH +G L L ++VVDDN + L+ G V SG+EAI+
Sbjct: 1267 KLHISDGQ--KLVLEQELEGMSVLVVDDNATARDIMRTTLESMGFRVDTVRSGEEAISRC 1324
Query: 277 LLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPIL 98
LL+ ++ +D +MP MDG E ++I++ + ++ + P+ IL
Sbjct: 1325 LLQA---YEVALIDWKMPNMDGLETARQIQLQAQSQSQSQPQSHPQPK----------IL 1371
Query: 97 AMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
++A Q + + GY+SKP +L
Sbjct: 1372 MVSAHADHEFLTQIEQLALAGYISKPISASRL 1403
>gb|EAO24426.1| PAS [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00663086.1| PAS [Syntrophomonas wolfei str. Goettingen]
Length = 763
Score = 79.7 bits (195), Expect = 1e-13
Identities = 49/128 (38%), Positives = 69/128 (53%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I+VV+DN VN V + L+ G +V A +G EA+ LL +N+D FMDI MP MDG E
Sbjct: 535 ILVVEDNEVNQMVLSNLLRSQGHQVEVAANGVEALELLDK-NNYDLVFMDILMPVMDGLE 593
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
T+RIR E + + PI+A+TA I E+ L + MD Y++
Sbjct: 594 TTRRIREQEE-----------------ITGFHIPIIAITAHAIHGDREKFLAAGMDDYLA 636
Query: 25 KPFEGEQL 2
KP + E+L
Sbjct: 637 KPVQMEEL 644
>gb|AAW88086.1| sensory transduction protein kinase [Vibrio fischeri ES114]
ref|YP_206974.1| sensory transduction protein kinase [Vibrio fischeri ES114]
Length = 864
Score = 79.7 bits (195), Expect = 1e-13
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Frame = -3
Query: 601 STKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVG 422
+T L L++ KS + + I ++ P+ +L+ +L +H N +
Sbjct: 669 NTPLILVQKHKSRITTLDSIID----GLVTFPILGHRFIKTLENSLS----IHQENQISI 720
Query: 421 NSTLGSL------------LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAIT 278
N + S L+K+ I++V+DN+VN KVA+ L G A++G+EA+
Sbjct: 721 NDVMNSTPLHSKSQNGKTSLNKEHILIVEDNLVNQKVASLFLGNSGYTFDIANNGQEAVE 780
Query: 277 LLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPIL 98
++ MD MP DGF ATK IR +E++ + + PI+
Sbjct: 781 KFTDSEAYNIILMDCMMPVKDGFTATKEIRKVEKNQKRK----------------KIPII 824
Query: 97 AMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
A+TA ++ +C +S MD +++KPF+ E L
Sbjct: 825 ALTASILDQDISKCYESGMDDFIAKPFKKEIL 856
>ref|NP_196633.1| AHK5 [Arabidopsis thaliana]
emb|CAC08246.1| histidine kinase-like protein [Arabidopsis thaliana]
Length = 950
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
K +I++V+DN +N+ VA +K+ G + A++G EAIT + ++D MD+ MP +D
Sbjct: 805 KPKILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAINSS-SYDLVLMDVCMPVLD 863
Query: 214 GFEATKRIRVMER--DLNEQIERG----EAPPECVGVRQW-RTPILAMTADVIQATHEQC 56
G +AT+ IR E + N IE G + E V +R R PI+AMTA+ + + E+C
Sbjct: 864 GLKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTANTLAESSEEC 923
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ MD ++SKP ++L
Sbjct: 924 YANGMDSFISKPVTLQKL 941
>ref|ZP_01133430.1| putative sensor protein [Pseudoalteromonas tunicata D2]
gb|EAR28829.1| putative sensor protein [Pseudoalteromonas tunicata D2]
Length = 1027
Score = 79.7 bits (195), Expect = 1e-13
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Frame = -3
Query: 604 DSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVV 425
+ TKL ++E ++ NS + + I KP+ L + + ++H N V
Sbjct: 832 EKTKLIIMER---AIAKNSSTINDTHCGYISKPILPEQLLYTYNKLTE--TRVH-PNNVE 885
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN--FD 251
L + R+++VDDN +N V++ L++ E+ A++G+ A+ LL+ + FD
Sbjct: 886 RRDDFPLLSRQYRVLIVDDNEINRVVSSALLEQMPLELVVAENGQIALDLLQDTEHRKFD 945
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
MD QMP +DGFEATK IR RG VG I+AMTA +
Sbjct: 946 LILMDCQMPILDGFEATKLIR-----------RG-----FVGKHYQDVIIIAMTAGAMSG 989
Query: 70 THEQCLKSEMDGYVSKPFE 14
+ C+++ MD +++KP +
Sbjct: 990 DKDACIQAGMDDFIAKPID 1008
>ref|ZP_00530683.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
gb|EAM64926.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
Length = 673
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/127 (34%), Positives = 71/127 (55%)
Frame = -3
Query: 394 KKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMD 215
K +++V+DN +N KVA L K G ++ A +G +A+ LK N+ MD+QMP MD
Sbjct: 547 KNWVLLVEDNTINQKVAQAMLLKMGYQIDIAFNGADAVEALKQK-NYGLVLMDLQMPVMD 605
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
G+EAT+ IR R+L+ ++ I+AMTA+ + ++C+ + MD
Sbjct: 606 GYEATRTIRQAGRELDSEVH-----------------IVAMTANATKEDRQKCMDAGMDD 648
Query: 34 YVSKPFE 14
+V+KP E
Sbjct: 649 FVAKPVE 655
>ref|ZP_00855004.1| PAS [Shewanella sp. MR-7]
gb|EAP23642.1| PAS [Shewanella sp. MR-7]
Length = 1767
Score = 79.3 bits (194), Expect = 1e-13
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCR-NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
I KP+ AS L + +LG L R N + L L KRI++V+DN +NL+VA
Sbjct: 1381 ISKPISASRLLDGIMNSLGRAGVLPVRRNSESIDPKLLLPLKGKRILLVEDNEMNLEVAT 1440
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L++ G ++ A +G+ A+ L +FD MD QMP MDG++AT+ IR
Sbjct: 1441 EFLEQVGIILSIATNGQIALDKLAQ-QSFDLVLMDCQMPVMDGYQATQAIRKR------- 1492
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
PE + P++AMTA+ + E CLK+ M+ +++KP E
Sbjct: 1493 -------PELAEL-----PVIAMTANAMAGDKEMCLKAGMNDHIAKPIE 1529
Score = 45.1 bits (105), Expect = 0.003
Identities = 36/138 (26%), Positives = 56/138 (40%)
Frame = -3
Query: 415 TLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
T+ L I+V DDN + L+ G V SG+EA+T + +D
Sbjct: 1274 TVAQELEGMSILVADDNATARDIMRTTLESMGFRVDTVRSGEEAVTRCS-QQEYAVALID 1332
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+MP +DG E K+I+ + ++ AP IL ++A Q Q
Sbjct: 1333 WKMPNLDGIETAKQIKQLAKN---------AP-----------RILMVSAHATQEFLSQI 1372
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ GY+SKP +L
Sbjct: 1373 EALGLAGYISKPISASRL 1390
>ref|ZP_00882182.1| PAS [Shewanella sp. MR-4]
gb|EAP46058.1| PAS [Shewanella sp. MR-4]
Length = 1767
Score = 79.3 bits (194), Expect = 1e-13
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCR-NGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
I KP+ AS L + +LG L R N + L L KRI++V+DN +NL+VA
Sbjct: 1381 ISKPISASRLLDGIMNSLGRAGVLPVRRNSESIDPKLLLPLKGKRILLVEDNEMNLEVAT 1440
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L++ G ++ A +G+ A+ L +FD MD QMP MDG++AT+ IR
Sbjct: 1441 EFLEQVGIILSIATNGQIALDKLAQ-QSFDLVLMDCQMPVMDGYQATQAIRKR------- 1492
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
PE + P++AMTA+ + E CLK+ M+ +++KP E
Sbjct: 1493 -------PELAEL-----PVIAMTANAMAGDKEMCLKAGMNDHIAKPIE 1529
Score = 45.1 bits (105), Expect = 0.003
Identities = 36/138 (26%), Positives = 56/138 (40%)
Frame = -3
Query: 415 TLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
T+ L I+V DDN + L+ G V SG+EA+T + +D
Sbjct: 1274 TVAQELEGMSILVADDNATARDIMRTTLESMGFRVDTVRSGEEAVTRCS-QQEYAVALID 1332
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+MP +DG E K+I+ + ++ AP IL ++A Q Q
Sbjct: 1333 WKMPNLDGIETAKQIKQLAKN---------AP-----------RILMVSAHATQEFLSQI 1372
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ GY+SKP +L
Sbjct: 1373 EALGLAGYISKPISASRL 1390
>ref|ZP_00815187.1| PAS [Shewanella putrefaciens CN-32]
gb|EAO93472.1| PAS [Shewanella putrefaciens CN-32]
Length = 1771
Score = 79.3 bits (194), Expect = 1e-13
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG--GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
I KP+ AS L + ALG GI + N + L L KR+++V+DN +NL+VA
Sbjct: 1381 ISKPISASRLLDGIMNALGRAGILPVRRHNEALDPQLLLPL-KGKRVLLVEDNEMNLEVA 1439
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
L++ G ++ A +G+ A+ L ++D MD QMP MDG++AT IR
Sbjct: 1440 TEFLEQVGIILSIATNGQIALDKLSQ-QSYDLVLMDCQMPVMDGYQATMAIRQR------ 1492
Query: 163 QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
PE + P++AMTA+ + E CL++ M+G+++KP E
Sbjct: 1493 --------PELAHL-----PVIAMTANAMAGDKEMCLRAGMNGHIAKPIE 1529
Score = 49.7 bits (117), Expect = 1e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = -3
Query: 415 TLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
T+G L ++VVDDN + AL+ G V +G+EA++ H + +D
Sbjct: 1274 TVGQELEGMSVLVVDDNATARDIMRTALESMGFNVDTVRTGEEAVSRC-IQHEYAVALID 1332
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+MP MDG EA ++I+ ++ +A P IL ++A A HE
Sbjct: 1333 WKMPSMDGLEAARQIQ----------QQAKAAPR----------ILMVSA---HANHEFL 1369
Query: 55 LKSE---MDGYVSKPFEGEQL 2
+ E + GY+SKP +L
Sbjct: 1370 TQIEQLGLAGYISKPISASRL 1390
>ref|ZP_00055969.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1666
Score = 79.3 bits (194), Expect = 1e-13
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Frame = -3
Query: 520 VIMKPLRASMLQVSLQRALGGIDKLHCRN-GVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
V++KP+ + L S+ R D+ + G G + S L R+++V+DN +N +VA
Sbjct: 1300 VLVKPVNPAALFDSIMRVFASDDRRSEEDEGTEGGTVDVSGLKGVRVLLVEDNELNQEVA 1359
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVME-RDLN 167
+ L G V A +G+ A+ K H +D MD+QMP MDG AT+ IR M +DL
Sbjct: 1360 SEILGDAGLVVDIAANGQIAVDKAKTGH-YDLILMDMQMPVMDGVTATREIRAMGFQDL- 1417
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
PI+AMTA+ +QA E+CL++ M+ +++KP + + +
Sbjct: 1418 --------------------PIIAMTANAMQADREKCLEAGMNDHIAKPIDPDSM 1452
Score = 40.8 bits (94), Expect = 0.058
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP---HNFDACFMDIQMPE 221
+R++VVDDN V L EV + G AI ++ ++ F+D QMP
Sbjct: 1197 RRMLVVDDNENARAVLVDMLSSMSFEVDSVEGGAAAIDAIREAMLDQPYEVVFLDWQMPG 1256
Query: 220 MDGFEATKRI 191
MDG E +RI
Sbjct: 1257 MDGLEVAERI 1266
>gb|AAZ64691.1| PAS [Ralstonia eutropha JMP134]
ref|YP_299535.1| PAS [Ralstonia eutropha JMP134]
Length = 1060
Score = 79.3 bits (194), Expect = 1e-13
Identities = 48/133 (36%), Positives = 73/133 (54%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L + +++V+DN +N +VA L + G +VT A++G+ A+ LL FD MD+QMP
Sbjct: 785 LRGRTVLLVEDNPINQEVAQALLTQAGMQVTQANNGQHALGLLAQGR-FDLVLMDVQMPM 843
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
+DG E T+RIR RD R P++A+TA ++ ++CL + M
Sbjct: 844 LDGLETTQRIR---RD----------------PRHASMPVVALTASALEDDRQRCLAAGM 884
Query: 40 DGYVSKPFEGEQL 2
D YVSKP E +L
Sbjct: 885 DDYVSKPIEPRKL 897
>ref|ZP_00530893.1| PAS [Chlorobium phaeobacteroides BS1]
gb|EAM64795.1| PAS [Chlorobium phaeobacteroides BS1]
Length = 993
Score = 79.0 bits (193), Expect = 2e-13
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Frame = -3
Query: 511 KPLRASMLQV---SLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
KP+R L L + G +L +N + +S RI++V+D+ VN V
Sbjct: 687 KPIRGKELYACVADLLKRRGSTPELLEKNKIPVHSVTEKERRHFRILLVEDSEVNQLVLL 746
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L+K G E +G EA+ L H +D MD QMPEMDG+EAT+ IR
Sbjct: 747 SMLQKEGYEADVVQNGTEALVALAKVH-YDLVLMDCQMPEMDGYEATRCIR--------- 796
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKP 20
RG+ V PI+A+TA+ + E+CL++ MD Y++KP
Sbjct: 797 --RGQG-----NVMNPEVPIVAITANAMTGDRERCLQAGMDDYMAKP 836
>gb|AAQ07255.1| putative sensor kinase PK4 [Oryza sativa]
Length = 653
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/133 (33%), Positives = 73/133 (54%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L + +I++++DN +N K+A ++ +G E+ A++G + I LL + +D MD+QMP
Sbjct: 419 LGRLKILLLEDNRLNQKLAQNVIEGFGFEIDIAENGDQGIKLLSE-NQYDLVLMDLQMPA 477
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
DG++ T IR +L +I PI+AMTA + H +CL + M
Sbjct: 478 RDGYQTTHYIR---SELKNEI-----------------PIIAMTAHSLADEHHRCLNAGM 517
Query: 40 DGYVSKPFEGEQL 2
DGYV KPF+ +L
Sbjct: 518 DGYVPKPFKQHEL 530
>gb|ABB37345.1| periplasmic sensor hybrid histidine kinase [Desulfovibrio
desulfuricans G20]
ref|YP_387040.1| periplasmic sensor hybrid histidine kinase [Desulfovibrio
desulfuricans G20]
Length = 981
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL---KPPHN--FDACFMDIQMP 224
R ++V+DNI+N VA L+ G V A+ G+EA+ +L +PP FD FMDIQMP
Sbjct: 653 RALLVEDNIINRHVALDMLQDMGFSVVSAEHGEEALAVLDDVEPPSGPGFDVVFMDIQMP 712
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWR-TPILAMTADVIQATHEQCLKS 47
MDG EAT+ IR R WR PI+AMTA V+ ++ L++
Sbjct: 713 VMDGIEATRVIRQHPR--------------------WRHIPIIAMTAHVMSEDRDKALEA 752
Query: 46 EMDGYVSKPFE 14
M+ YV+KP +
Sbjct: 753 GMNDYVTKPVD 763
>ref|ZP_00836597.1| PAS [Shewanella sp. PV-4]
gb|EAP03455.1| PAS [Shewanella sp. PV-4]
Length = 1768
Score = 79.0 bits (193), Expect = 2e-13
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRN-GVVGNSTLGSLLHKKRIIVVDDNIVNLKVAA 341
I KP+ AS L + ALG + R G + L + L KRI++V+DN +N +VA+
Sbjct: 1381 ITKPISASRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKGKRILLVEDNEMNQEVAS 1440
Query: 340 GALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L++ G ++ A++G+ A+ L +FD MD QMP MDG++AT +R
Sbjct: 1441 EFLEQVGVILSIAENGQVALEKLAM-QSFDLVLMDCQMPVMDGYQATAELRKR------- 1492
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
PE + P++AMTA+ + E CL++ M+ +++KP E
Sbjct: 1493 -------PELADL-----PVIAMTANAMAGDKEMCLRAGMNDHIAKPIE 1529
Score = 45.8 bits (107), Expect = 0.002
Identities = 37/133 (27%), Positives = 62/133 (46%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L RI+V DDN + L+ G V SG EA++ + ++ +D +MPE
Sbjct: 1279 LEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSRCQET-DYGVALIDWRMPE 1337
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
MDG E +R+ L+E+ PP +T I++ AD ++ ++E+
Sbjct: 1338 MDGLETARRL------LSERTN----PP--------KTLIVSAHAD--GDFIDKAEQAEI 1377
Query: 40 DGYVSKPFEGEQL 2
GY++KP +L
Sbjct: 1378 SGYITKPISASRL 1390
>gb|AAZ48415.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
ref|YP_286885.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 620
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/130 (37%), Positives = 71/130 (54%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
+RI+VVDD +N KV L++ G V A+ G+EA+ L D MD QMP MDG
Sbjct: 495 RRILVVDDRQINRKVVGAMLERLGCHVLMAEHGEEALARL-ATEVVDLVLMDCQMPVMDG 553
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
FEAT+RIR E + +I+ T I+AMTA+ ++ ++CL + M+ Y
Sbjct: 554 FEATRRIREGE---DSRIDPA-------------TKIIAMTANAMEGDKQRCLAAGMNDY 597
Query: 31 VSKPFEGEQL 2
+SKP +L
Sbjct: 598 ISKPIFAAEL 607
>gb|EAN28230.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
ref|ZP_00607367.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Magnetococcus sp. MC-1]
Length = 920
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/172 (29%), Positives = 86/172 (50%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+ ++L + LG + + G + +L +I++V+DN +N +VA
Sbjct: 511 VTKPITQTILFEGVLEVLGYVVQAQQHAGGRDRTREKRVLSGCQILLVEDNEINQQVACE 570
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L+ G V A+SG++A+ + FDA MDIQMP MDG+EAT+ IR + +
Sbjct: 571 LLQGEGVTVVVANSGQQAVDRVLSGERFDAVLMDIQMPGMDGYEATQVIRKQPQFSD--- 627
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
PI+AMTA+ + E+CL + M+ ++ KP + + L
Sbjct: 628 ----------------LPIIAMTANAMAGDRERCLAAGMNDHIGKPIQPKLL 663
>ref|YP_237476.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Histidine kinase:Histidine kinase
[Pseudomonas syringae pv. syringae B728a]
gb|AAY39438.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal:Histidine kinase:Histidine kinase
[Pseudomonas syringae pv. syringae B728a]
Length = 929
Score = 79.0 bits (193), Expect = 2e-13
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Frame = -3
Query: 574 PKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLH 395
P + NS I R ++ KP+ L+ +L L ++K GVV N G ++
Sbjct: 733 PSKIIARNSGIKR-----ILAKPVAGYTLKTTLADELTQLNK-----GVVSNKP-GPVVT 781
Query: 394 KK-------RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
RI+V +DN ++ KV G L K A +G+EA+ +K +D MD
Sbjct: 782 PPVNVPGDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALRAMKA-QRYDLVLMD 840
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+MP +DGF AT+++R E VG ++ RTP++A+TA ++ ++
Sbjct: 841 CEMPILDGFSATEQLRAWE----------------VGNQRVRTPVVALTAHILTEHKDRA 884
Query: 55 LKSEMDGYVSKPFEGEQL 2
++ MDG+++KP E QL
Sbjct: 885 RQAGMDGHMAKPIELSQL 902
Score = 46.2 bits (108), Expect = 0.001
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -3
Query: 412 LGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDAC 245
L S L R++VVDDN KV +G V+ SGKEA+ LL+ + FD
Sbjct: 634 LDSPLKDARVLVVDDNDTCRKVLVQQCSAWGLNVSAVASGKEALALLRTKAHLRDYFDVV 693
Query: 244 FMDIQMPEMDGFEATKRIR 188
+D MP M G + +I+
Sbjct: 694 LLDQNMPGMTGMQLAAKIK 712
>gb|AAZ36841.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
ref|YP_276567.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 929
Score = 79.0 bits (193), Expect = 2e-13
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Frame = -3
Query: 574 PKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDK--LHCRNGVVGNSTLGSL 401
P + NS I R ++ KP+ L+ +L L ++K + G V N+ + S+
Sbjct: 733 PSKIIARNSGIKR-----ILAKPVAGYTLKTTLADELTQLNKGVAAQKPGPVINTPV-SV 786
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
RI+V +DN ++ KV G L K A +G+EA+ +K +D MD +MP
Sbjct: 787 PGDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALRAMKA-QRYDLVLMDCEMPI 845
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
+DGF AT+++R E VG ++ RTP++A+TA ++ ++ ++ M
Sbjct: 846 LDGFSATEQLRAWE----------------VGNQRVRTPVVALTAHILTEHKDRARQAGM 889
Query: 40 DGYVSKPFEGEQL 2
DG+++KP E QL
Sbjct: 890 DGHMAKPIELSQL 902
Score = 46.2 bits (108), Expect = 0.001
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -3
Query: 412 LGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDAC 245
L S L R++VVDDN KV +G V+ SGKEA+ LL+ + FD
Sbjct: 634 LDSPLKDARVLVVDDNDTCRKVLVQQCSAWGLNVSAVASGKEALALLRTKAHLRDYFDVV 693
Query: 244 FMDIQMPEMDGFEATKRIR 188
+D MP M G + +I+
Sbjct: 694 LLDQNMPGMTGMQLAAKIK 712
>ref|ZP_01090362.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
gb|EAQ81194.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
Length = 1259
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/128 (38%), Positives = 72/128 (56%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I+VVDDN +N VA L+ G +V+ A++G++A+ ++ FD MD +MPEMDGF
Sbjct: 989 ILVVDDNEINRIVAKEILQSEGFQVSLAENGRQAVEKIQSGQ-FDLVLMDCEMPEMDGFA 1047
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+ IR + E G PE + PI+A+TA + E+CL + M+GYV
Sbjct: 1048 ATRMIRNLA-------ENGH--PELANL-----PIVALTAQAVLGDKERCLAAGMNGYVM 1093
Query: 25 KPFEGEQL 2
KP +L
Sbjct: 1094 KPVNRSEL 1101
>ref|ZP_00676459.1| PAS [Pelobacter propionicus DSM 2379]
gb|EAO38053.1| PAS [Pelobacter propionicus DSM 2379]
Length = 785
Score = 78.6 bits (192), Expect = 3e-13
Identities = 43/128 (33%), Positives = 66/128 (51%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
+++ +DN VN ++ L+ G +V +G++A+ + +D FMD QMPE+DG+E
Sbjct: 664 VLLAEDNPVNQELGRLVLESLGCKVDVVGNGRQAVEAVSD-REYDLVFMDCQMPEVDGYE 722
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+ IR E + EQ P++A+TA + E CL + MD Y S
Sbjct: 723 ATRSIRQREAETGEQTR--------------HIPVIALTAHAMDGDRETCLSAGMDDYAS 768
Query: 25 KPFEGEQL 2
KPF QL
Sbjct: 769 KPFTPIQL 776
>ref|ZP_01154229.1| PAS [Methanosaeta thermophila PT]
gb|EAR48003.1| PAS [Methanosaeta thermophila PT]
Length = 1692
Score = 78.6 bits (192), Expect = 3e-13
Identities = 58/177 (32%), Positives = 90/177 (50%)
Frame = -3
Query: 532 YNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNL 353
++ ++I KP++ S + ++ AL G + VG S L RI+V +DN VNL
Sbjct: 1420 HDTSLIPKPVKHSQMISAMISALIGESIEVEPSQEVGRSDL-------RILVAEDNPVNL 1472
Query: 352 KVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERD 173
KV L G A +G E ++ L+ ++D FMD+QMP+MDG EA +RIR M
Sbjct: 1473 KVVLMMLSHLGYRADSARNGLEVLSALEH-RDYDLVFMDVQMPDMDGLEAARRIRDM--- 1528
Query: 172 LNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+G P I+A+TA ++ ++C+ + MD Y+SKP E+L
Sbjct: 1529 ------KGYEGPR----------IVAITAYALEGDRDRCIAAGMDDYISKPVTMEKL 1569
>ref|ZP_00586405.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Shewanella amazonensis SB2B]
gb|EAN39167.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Shewanella amazonensis SB2B]
Length = 941
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/135 (37%), Positives = 67/135 (49%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFM 239
+T S H ++ VDDN+ NLK+ LK+ A V SG +A+ L K +FD FM
Sbjct: 684 ATKPSARHPLNVLAVDDNLANLKLIDTLLKELVANVVAVSSGDQAVALAK-SRSFDLIFM 742
Query: 238 DIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQ 59
DIQMP DG AT+ IR + LN TPI+A+TA I E+
Sbjct: 743 DIQMPGTDGVTATRLIR--QDSLNR-----------------NTPIIAVTAHAINEERER 783
Query: 58 CLKSEMDGYVSKPFE 14
S MDGY+ KP +
Sbjct: 784 IQASGMDGYLPKPID 798
>ref|ZP_00775653.1| PAS [Pseudoalteromonas atlantica T6c]
gb|EAO67751.1| PAS [Pseudoalteromonas atlantica T6c]
Length = 1172
Score = 78.6 bits (192), Expect = 3e-13
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = -3
Query: 526 LNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKV 347
++ I KP++ L+ + AL D + L I++V+DN +N +V
Sbjct: 1004 VSYIAKPVKPETLKGAFTGALENGDNTKLITALPETKLLNKYRQAPHILLVEDNFINQQV 1063
Query: 346 AAGALKKYGAEVTCADSGKEAI-TLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDL 170
LKK V A++G+EAI TL + FDA MD QMP MDG+EA++ IR +
Sbjct: 1064 VIEMLKKLHCSVQVAENGQEAIHTLEESEAKFDAILMDCQMPIMDGYEASRTIRKSQHSN 1123
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKP 20
PI+A+TA+ ++ E CL + M+ Y++KP
Sbjct: 1124 YAS----------------TLPIIALTANAMKGDKEACLAAGMNAYLTKP 1157
>gb|AAY96071.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Pf-5]
ref|YP_257806.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Pf-5]
Length = 928
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/129 (34%), Positives = 73/129 (56%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI+V +DN ++ KV G L K + A +G+EA+ +K + +D MD +MP +DGF
Sbjct: 795 RILVAEDNSISTKVIRGMLGKLNLQPDTASNGEEALQAMKA-NRYDLVLMDCEMPVLDGF 853
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+++R E VG ++ RTP++A+TA ++ E+ ++ MDG++
Sbjct: 854 SATQQLRAWE----------------VGNQRVRTPVVALTAHILAEHKERARQAGMDGHM 897
Query: 28 SKPFEGEQL 2
+KP E QL
Sbjct: 898 AKPVELSQL 906
Score = 45.1 bits (105), Expect = 0.003
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDI 233
L R++VVDDN KV +G V+ SGKEA+ LL+ + FD +D
Sbjct: 638 LQGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQ 697
Query: 232 QMPEMDGFEATKRIR 188
MP M G + +I+
Sbjct: 698 NMPGMTGMQLAAKIK 712
>ref|NP_716490.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
gb|AAN53935.1| sensory box histidine kinase/response regulator [Shewanella
oneidensis MR-1]
Length = 1765
Score = 78.6 bits (192), Expect = 3e-13
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALG--GIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVA 344
I KP+ AS L + ALG GI + + L L KRI++V+DN +NL+VA
Sbjct: 1381 ISKPISASRLLDGIMNALGRSGILPVRRHQDNIAPELLLPL-KGKRILLVEDNEMNLEVA 1439
Query: 343 AGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNE 164
L++ G ++ A +G+ A+ L +FD MD QMP MDG++ATK IR
Sbjct: 1440 TEFLEQVGIILSIATNGQIALDKLAQ-QSFDLVLMDCQMPVMDGYQATKAIR-------- 1490
Query: 163 QIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFE 14
+R E + P++AMTA+ + E CL++ M+ +++KP E
Sbjct: 1491 --QRPELA---------QLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIE 1529
Score = 40.8 bits (94), Expect = 0.058
Identities = 36/137 (26%), Positives = 55/137 (40%)
Frame = -3
Query: 412 LGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDI 233
+G L I+V DDN + L+ G V SG EAI + + +D
Sbjct: 1275 VGQELDGMSILVADDNATARDIMRTTLESMGFNVDTVRSGDEAI-MRCSQQEYAVALIDW 1333
Query: 232 QMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCL 53
+MP +DG E K+I+ ++ AP IL ++A Q Q
Sbjct: 1334 KMPNLDGIETAKQIKQQTKN---------AP-----------RILMVSAHANQDFLTQIE 1373
Query: 52 KSEMDGYVSKPFEGEQL 2
+ + GY+SKP +L
Sbjct: 1374 QLGLAGYISKPISASRL 1390
>gb|AAW87430.1| sensory transduction protein kinase [Vibrio fischeri ES114]
ref|YP_206318.1| sensory transduction protein kinase [Vibrio fischeri ES114]
Length = 864
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN-FDACFMDIQMPEMD 215
K ++VV+DN +N KVA+ LKK G V A++G+EA+ ++ + + MD MP MD
Sbjct: 742 KTVLVVEDNAINQKVASLLLKKAGFCVEIANNGQEALDMVMSKTSPYSLVLMDCMMPIMD 801
Query: 214 GFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDG 35
GF AT+ IR E + ++ R PI+A+TA V ++C +S MD
Sbjct: 802 GFAATEAIRKWEENQEQK----------------RLPIIALTASVFIEDIDKCYQSGMDD 845
Query: 34 YVSKPFEGE 8
YV+KPF E
Sbjct: 846 YVAKPFRKE 854
>gb|ABA72355.1| Periplasmic Sensor Hybrid Histidine Kinase [Pseudomonas fluorescens
PfO-1]
ref|YP_346344.1| Periplasmic Sensor Hybrid Histidine Kinase [Pseudomonas fluorescens
PfO-1]
Length = 925
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/129 (34%), Positives = 72/129 (55%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI+V +DN ++ KV G L K + A +G+EA+ +K +D MD +MP +DGF
Sbjct: 792 RILVAEDNTISTKVIRGMLGKLNLQPDTASNGEEALQAMKA-QRYDLVLMDCEMPILDGF 850
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
AT+++R E VG ++ RTPI+A+TA ++ E+ ++ MDG++
Sbjct: 851 SATQQLRAWE----------------VGNQRIRTPIVALTAHILAEHKERARQAGMDGHM 894
Query: 28 SKPFEGEQL 2
+KP E QL
Sbjct: 895 AKPVELSQL 903
Score = 47.8 bits (112), Expect = 5e-04
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FD 251
S L S L R++VVDDN KV +G V+ SGKEA+ LL+ + FD
Sbjct: 632 SDLDSPLQGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFD 691
Query: 250 ACFMDIQMPEMDGFEATKRIR 188
+D MP M G + +I+
Sbjct: 692 VVLLDQNMPGMTGMQLAAKIK 712
>ref|ZP_00590975.1| PAS [Prosthecochloris aestuarii DSM 271]
gb|EAN23780.1| PAS [Prosthecochloris aestuarii DSM 271]
Length = 991
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/123 (38%), Positives = 67/123 (54%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
RI+VV+D++VN +V L K G V A++G EA+ L +D MD QMPEMDGF
Sbjct: 736 RILVVEDSVVNQQVLVAMLSKNGCSVDIAENGVEALKALGTTP-YDLVLMDCQMPEMDGF 794
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT+RIR E GV ++A+TA+ ++ E+CL + M+ Y+
Sbjct: 795 EATRRIRSGEH----------------GVLNPDIAVIAVTANAMKGDRERCLHAGMNDYI 838
Query: 28 SKP 20
KP
Sbjct: 839 PKP 841
>ref|NP_901291.1| probable sensor/response regulatory hybrid protein [Chromobacterium
violaceum ATCC 12472]
gb|AAQ59297.1| probable sensor/response regulatory hybrid protein [Chromobacterium
violaceum ATCC 12472]
Length = 1748
Score = 78.2 bits (191), Expect = 3e-13
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAG 338
+ KP+ L ++ R++ G + + G L +++V+DN +N +VA+
Sbjct: 1378 LTKPITPQQLVDAVVRSVTGEGEAE---RTPATTAFGRRLDGMSVLLVEDNALNRQVASE 1434
Query: 337 ALKKYGAEVTCADSGKEAIT-LLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQ 161
L++ GA V+ A+ G ++ + FD MD+QMP++DG EAT+RIR
Sbjct: 1435 LLQEEGARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIR--------- 1485
Query: 160 IERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
+R R PILAMTA+ QA CL + M+ +V KP + ++L
Sbjct: 1486 ----------ADMRCQRLPILAMTANASQADRAACLAAGMNDHVGKPIDIDEL 1528
Score = 39.7 bits (91), Expect = 0.13
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Frame = -3
Query: 505 LRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSL---LHKKRIIVVDDNIVNLKVAAGA 335
L L+V Q G G+ + L L L + ++VVDDN + ++
Sbjct: 1229 LMGGQLRVESQLGCGSRFWFDLTLGMAADQPLAQLPEPLGQLNVLVVDDNPLAGEILMDT 1288
Query: 334 LKKYGAEVTCADSGKEAITLL----KPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLN 167
+ G AD G+EA+ + +D MD +MP +DG + VM + L
Sbjct: 1289 ISTVGWRAEYADGGEEALEKVHGAGSAGQRYDVVLMDWRMPGLDGVGVAE---VMRQQL- 1344
Query: 166 EQIERGEAPPECVGVRQWRTPILAMTAD 83
G+ PP + V + +LA A+
Sbjct: 1345 ----AGDKPPVIIMVTAFGREVLAEAAE 1368
>ref|ZP_00835929.1| PAS [Shewanella sp. PV-4]
gb|EAP03999.1| PAS [Shewanella sp. PV-4]
Length = 1171
Score = 78.2 bits (191), Expect = 3e-13
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Frame = -3
Query: 538 REYNLNVIMKPLRAS--MLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDN 365
R L + PL S M + +A G++ +H + + + + R++VVDDN
Sbjct: 846 RNIELEYLNNPLLFSEFMQKFGAPKASSGVENVHPQVTPIISEEEAHRIKGARVLVVDDN 905
Query: 364 IVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPH----NFDACFMDIQMPEMDGFEATK 197
+N++VA G L + E A +G+EA+T L+ MD QMP ++G++ T+
Sbjct: 906 EINIEVALGILSELPLEFVRAINGQEALTKLRECEQEGLGVHCILMDCQMPILNGYDCTR 965
Query: 196 RIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPF 17
IR E GEA + TPI+AMTA + ++C+++ M+ Y++KP
Sbjct: 966 AIRAG--------EAGEAFVD--------TPIIAMTASAMMGERDKCIEAGMNDYITKPI 1009
Query: 16 EGEQL 2
E+L
Sbjct: 1010 VAERL 1014
>emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes]
ref|NP_907061.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes DSM
1740]
Length = 1555
Score = 78.2 bits (191), Expect = 3e-13
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Frame = -3
Query: 538 REYNLNVIM-KPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHK--KRIIVVDD 368
+E +NV + KP+ S+L L LG K +S L + +I++V+D
Sbjct: 1184 KEQGINVFLQKPINPSLLYNVLLEILGEGIKQSGVQKADSHSLKNELTTRAGSQILLVED 1243
Query: 367 NIVNLKVAAGALKKYGAEVTCADSGKEAITLLKP-PHNFDACFMDIQMPEMDGFEATKRI 191
N +N ++ G L+ +G + A +G+EA+TL + P ++ MDIQMP MDG+EATK +
Sbjct: 1244 NAMNREIIMGMLQPFGIRIDIAQNGQEAVTLYQENPKRYELILMDIQMPVMDGYEATKIL 1303
Query: 190 RVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEG 11
R +L PI+A+TA+ +++ E+ + MD +++KP
Sbjct: 1304 RAQGANL---------------------PIIALTANAMKSDIERTKAAGMDEHLNKPIVV 1342
Query: 10 EQL 2
E+L
Sbjct: 1343 EKL 1345
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLK-PPHNFDACFMDIQMPEMD 215
K +++VDD K+ A LK + EV+ A SG+EA+ L+K P +D MD +MP+MD
Sbjct: 1090 KHVLIVDDTPSWQKILARLLKGFHIEVSVASSGEEALRLIKEQPGFYDLILMDWKMPQMD 1149
Query: 214 GFEATKRIR 188
G E TK I+
Sbjct: 1150 GIETTKLIK 1158
>ref|ZP_00678575.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Pelobacter propionicus DSM 2379]
gb|EAO35790.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Pelobacter propionicus DSM 2379]
Length = 977
Score = 78.2 bits (191), Expect = 3e-13
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Frame = -3
Query: 517 IMKPLRASMLQVSL----QRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLK 350
+ KP+R+S L L ALG + + VV +T + + ++V+DN+VN
Sbjct: 645 LTKPVRSSWLYDCLIGLTGTALGRTSQRKEQEQVV--ATGFTTVSDSSALLVEDNLVNQD 702
Query: 349 VAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDL 170
V L+ G EVT A +G EA+ LL F MD QMP MDG++ TK +R+ E+
Sbjct: 703 VGREMLRFLGYEVTVASNGSEALDLL-ASRRFSIILMDCQMPVMDGYQTTKELRLREK-- 759
Query: 169 NEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
AP E G ++A+TA + E C+++ MD Y++KP+ EQL
Sbjct: 760 -------SAPGEGGGTP--HQTVIALTAHAGEQDRELCMEAGMDDYLTKPYTLEQL 806
Score = 42.4 bits (98), Expect = 0.020
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -3
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN---FDA 248
S+ L +++++VVDDN N + + +G + A EA+ L+ F
Sbjct: 532 SSAHEALREQKVLVVDDNATNRTILEQIILSWGMRIKTASCALEALASLRNAGQSDPFQL 591
Query: 247 CFMDIQMPEMDGFEATKRIR 188
+D+ MP MDG E IR
Sbjct: 592 AILDMMMPAMDGIELAHAIR 611
>ref|ZP_00052614.1| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 511
Score = 78.2 bits (191), Expect = 3e-13
Identities = 48/124 (38%), Positives = 69/124 (55%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN+ N KVAAG L + G VT A++G EA+ L+ FD MD+QMPEMDG E
Sbjct: 276 ILLAEDNVFNQKVAAGLLNREGHRVTLANNGLEALEKLQ-DGRFDLILMDMQMPEMDGPE 334
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT+RIR + L PI+A+TA+ + +C + MDG+V+
Sbjct: 335 ATRRIRGLPGALA------------------AIPIIALTANAMADDVARCRAAGMDGHVA 376
Query: 25 KPFE 14
KP +
Sbjct: 377 KPID 380
>ref|ZP_00504495.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Clostridium thermocellum ATCC
27405]
gb|EAM46451.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Hpt [Clostridium thermocellum ATCC
27405]
Length = 932
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/129 (33%), Positives = 74/129 (57%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+I++V+D+ VNL++ L+ G + A SG+EA+ + + ++ MDI+MP MDG+
Sbjct: 590 KILLVEDSSVNLQMTKEILENMGIDTDTAQSGEEAVKKAES-NEYELILMDIRMPGMDGY 648
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EAT+RIR +ER PI+A+TAD ++ ++ ++ M+GY+
Sbjct: 649 EATRRIRKLERG--------------------SMPIVALTADAVEGVAQKAKEAGMNGYL 688
Query: 28 SKPFEGEQL 2
+KP E E+L
Sbjct: 689 TKPLEPEKL 697
>ref|ZP_01063121.1| hypothetical two-component sensor [Vibrio sp. MED222]
gb|EAQ55800.1| hypothetical two-component sensor [Vibrio sp. MED222]
Length = 808
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/123 (36%), Positives = 69/123 (56%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+++VV+D+ VN +VA LKK G EV AD+G+ + + + ++ FMD QMP +DGF
Sbjct: 675 KVLVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFQA-NEYEMIFMDCQMPVLDGF 733
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EATK+IR +E ++ I PI+A+TA+V+Q C MD ++
Sbjct: 734 EATKQIRALEEGTSKHI-----------------PIVALTANVVQRDKHLCFDVGMDEFL 776
Query: 28 SKP 20
KP
Sbjct: 777 PKP 779
Score = 42.0 bits (97), Expect = 0.026
Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQ 230
+K +++VDD+ +N+++ + L+ +G + C ++ +A+ L+ +D +D
Sbjct: 484 NKVSVLLVDDSQLNMRITSTQLQSFGVKSECCETATQALELVSESVAKSLPYDLVLIDKV 543
Query: 229 MPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLK 50
MP +DGF+ + R L E+ ++ A P+ ++ ++AD + + +
Sbjct: 544 MPSIDGFQ-------LARSLIERFDK--ACPK----------LVMISADPRKQDEARAKQ 584
Query: 49 SEMDGYVSKPFEGEQL 2
Y+++P++ QL
Sbjct: 585 VGFVAYIARPYQDNQL 600
>emb|CAI85186.1| putative sensor protein [Pseudoalteromonas haloplanktis TAC125]
ref|YP_338629.1| sensor protein [Pseudoalteromonas haloplanktis TAC125]
Length = 1120
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL--KPPHNFDACFMDIQMP 224
++ ++++V+DN +N VA LK+ G A++G+EAI L +P + + MD QMP
Sbjct: 992 NEPQVLLVEDNKINQVVAGALLKQAGISFDIAENGREAIKQLNEQPANTYQLILMDCQMP 1051
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
EMDG++ATK IR G++ G I+A+TA+ +Q E+CL +
Sbjct: 1052 EMDGYQATKAIR-----------NGDS-----GKHYQNITIIALTANAMQGDKEKCLAAG 1095
Query: 43 MDGYVSKPFE 14
M+ Y+SKP +
Sbjct: 1096 MNDYLSKPLD 1105
>ref|ZP_00695008.1| PAS [Rhodoferax ferrireducens DSM 15236]
gb|EAO38837.1| PAS [Rhodoferax ferrireducens DSM 15236]
Length = 1033
Score = 77.8 bits (190), Expect = 4e-13
Identities = 47/129 (36%), Positives = 70/129 (54%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN +N +VA+ L+K G VT A G EA+ L++ FD MD+ MP M G
Sbjct: 705 RVLLVEDNDLNQEVASSFLRKRGVSVTVAWHGGEAVELIQ-HQQFDLVLMDLHMPVMGGI 763
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EA +RIR + + N PI+AMTA V++ +C + M+G+V
Sbjct: 764 EAARRIRELPQGKN-------------------LPIVAMTAAVMEEDRARCRAAGMNGFV 804
Query: 28 SKPFEGEQL 2
+KP E E L
Sbjct: 805 AKPVEPEDL 813
Score = 47.4 bits (111), Expect = 6e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDI 233
+H KR++VVDD + ++ + L+ +G E T A+SG +A+ + + F A +D
Sbjct: 557 MHGKRVLVVDDQATSRQILSRLLQAWGMEATEAESGPQALARVAEANRAGRPFHAVLLDW 616
Query: 232 QMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCL 53
+MP M G E ++ + +G P +L +TA Q+ ++
Sbjct: 617 RMPGMSGLEVATALKAQDE------AKGLPTP---------LQVLMVTAYDKQSLLQEPE 661
Query: 52 KSEMDGYVSKP 20
+ +DG ++KP
Sbjct: 662 AANIDGVLTKP 672
>gb|EAN28038.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
ref|ZP_00607570.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
Length = 662
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/130 (36%), Positives = 74/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KRI++VDD+ N + L++Y +T A++GKEA+TL+K H FD FMDIQMP MDG
Sbjct: 540 KRILLVDDSEDNRSLIQAYLRRYPHALTTAENGKEALTLVKEKH-FDIIFMDIQMPVMDG 598
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E L +Q R PI+A+TA V+ ++ + + + +
Sbjct: 599 LSATRAIRAWE--LTQQSNR-------------NVPIIALTAHVMLEDEKKSIDAGCNFH 643
Query: 31 VSKPFEGEQL 2
++KP + +L
Sbjct: 644 LTKPIKKARL 653
>gb|EAN26742.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
ref|ZP_00608844.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Magnetococcus sp. MC-1]
Length = 662
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/130 (36%), Positives = 74/130 (56%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
KRI++VDD+ N + L++Y +T A++GKEA+TL+K H FD FMDIQMP MDG
Sbjct: 540 KRILLVDDSEDNRSLIQAYLRRYPHALTTAENGKEALTLVKEKH-FDIIFMDIQMPVMDG 598
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
AT+ IR E L +Q R PI+A+TA V+ ++ + + + +
Sbjct: 599 LSATRAIRAWE--LTQQSNR-------------NVPIIALTAHVMLEDEKKSIDAGCNFH 643
Query: 31 VSKPFEGEQL 2
++KP + +L
Sbjct: 644 LTKPIKKARL 653
>ref|ZP_00989210.1| hypothetical two-component sensor [Vibrio splendidus 12B01]
gb|EAP95805.1| hypothetical two-component sensor [Vibrio splendidus 12B01]
Length = 809
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/123 (36%), Positives = 69/123 (56%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+++VV+D+ VN +VA LKK G EV AD+G+ + + + ++ FMD QMP +DGF
Sbjct: 675 KVLVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFQA-NEYEMIFMDCQMPVLDGF 733
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EATK+IR +E ++ I PI+A+TA+V+Q C MD ++
Sbjct: 734 EATKQIRALEEGSSQHI-----------------PIVALTANVVQRDKHLCFDVGMDEFL 776
Query: 28 SKP 20
KP
Sbjct: 777 PKP 779
Score = 45.1 bits (105), Expect = 0.003
Identities = 29/136 (21%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPP----HNFDACFMDIQ 230
+K +++VDD+ +N+++ + L+ +G + C ++ +A+ L+ +D +D
Sbjct: 484 NKVSVLLVDDSQLNMRITSTQLQSFGVKSECCETATQALELVSESVAKSSPYDLVLIDKV 543
Query: 229 MPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLK 50
MP +DGF+ + R L E+ ++ A P+ ++ ++AD + E+ +
Sbjct: 544 MPSIDGFQ-------LARSLIERFDK--ACPK----------LVMISADPRKQDEERAKQ 584
Query: 49 SEMDGYVSKPFEGEQL 2
Y+++P++ QL
Sbjct: 585 VGFVAYIARPYQDNQL 600
>ref|ZP_01118139.1| sensory transduction histidine kinase [Polaribacter irgensii 23-P]
gb|EAR12648.1| sensory transduction histidine kinase [Polaribacter irgensii 23-P]
Length = 907
Score = 77.8 bits (190), Expect = 4e-13
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = -3
Query: 421 NSTLGSLLHKK---RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
NST L K +I++VDD +N +A + +G + A +GK AI LLK +N+D
Sbjct: 645 NSTTLHKLKSKIPLKILIVDDISINQFLAQTIVHDFGFKSDIASNGKVAIELLKK-NNYD 703
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
MD+QMPEM+G+EAT IR + E P + PI+A+TADV +
Sbjct: 704 LILMDLQMPEMNGWEATTFIR----------NKMEPPKSTI-------PIIALTADVTKK 746
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
++C MD YVSKP ++L
Sbjct: 747 NADKCKDQGMDAYVSKPINEKEL 769
>gb|AAM37343.1| two-component system sensor protein [Xanthomonas axonopodis pv. citri
str. 306]
ref|NP_642807.1| two-component system sensor protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 1364
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLK-PPHNFDACFMDIQMP 224
L +++VDD+ +N +VA L+ GA VT A G++A++ LK P+ F MD+QMP
Sbjct: 1029 LEGAHLLLVDDSDINCEVAQRILEGEGAMVTVAHDGEQAVSTLKRAPNLFHLVLMDVQMP 1088
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
+DG+EAT+R+R + P + P++A+TA + E+ L++
Sbjct: 1089 VVDGYEATRRLRQI--------------PALASL-----PVIALTAGAFRPQQEKALEAG 1129
Query: 43 MDGYVSKPFEGEQL 2
M+G+++KPF E+L
Sbjct: 1130 MNGFIAKPFNVEEL 1143
>gb|AAM41638.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAY48819.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|YP_242839.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. 8004]
ref|NP_637714.1| two-component system sensor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 1364
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAI-TLLKPPHNFDACFMDIQMP 224
L ++++VDD+ +N +VA L+ GA VT A G++A+ TL + P F MD+QMP
Sbjct: 1029 LEGAQLLLVDDSEINCEVAQRILEGEGAMVTVAHDGEQAVNTLKRAPDLFHLVLMDVQMP 1088
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
+DG+EAT+R+R + P + P++A+TA + E+ L++
Sbjct: 1089 VVDGYEATRRLRQI--------------PSLASL-----PVIALTAGAFRPQQEKALEAG 1129
Query: 43 MDGYVSKPFEGEQL 2
M+G+++KPF E+L
Sbjct: 1130 MNGFIAKPFNVEEL 1143
>emb|CAJ24348.1| two-component system sensor histidine kinase-response regulator
hybridprotein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
ref|YP_364402.1| two-component system sensor histidine kinase-response regulator
hybridprotein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 1364
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLK-PPHNFDACFMDIQMP 224
L +++VDD+ +N +VA L+ GA VT A G++A++ LK P+ F MD+QMP
Sbjct: 1029 LEGAHLLLVDDSDINCEVAQRILEGEGAMVTVAHDGEQAVSTLKRAPNLFHLVLMDVQMP 1088
Query: 223 EMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSE 44
+DG+EAT+R+R + P + P++A+TA + E+ L++
Sbjct: 1089 VVDGYEATRRLRQI--------------PALASL-----PVIALTAGAFRPQQEKALEAG 1129
Query: 43 MDGYVSKPFEGEQL 2
M+G+++KPF E+L
Sbjct: 1130 MNGFIAKPFNVEEL 1143
>ref|ZP_00559093.1| PAS [Desulfitobacterium hafniense DCB-2]
gb|EAM97079.1| PAS [Desulfitobacterium hafniense DCB-2]
Length = 896
Score = 77.4 bits (189), Expect = 6e-13
Identities = 51/136 (37%), Positives = 68/136 (50%)
Frame = -3
Query: 409 GSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQ 230
GS RI++ +D+IVN V LK G V A G+EA+ L + +D MDIQ
Sbjct: 647 GSTARSYRILLAEDHIVNSIVITEMLKIQGHRVDIAMDGEEALALYHQ-NPYDVILMDIQ 705
Query: 229 MPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLK 50
+P +DG E TKRIR E Q RTPI+A+TA +Q E L+
Sbjct: 706 LPRLDGIEVTKRIRASEG------------------AQSRTPIIALTAYALQGDREGFLQ 747
Query: 49 SEMDGYVSKPFEGEQL 2
+ MD Y+ KP E+L
Sbjct: 748 AGMDEYIPKPVMMEEL 763
>gb|AAK25585.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
ref|NP_422417.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
Length = 595
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/138 (34%), Positives = 72/138 (52%)
Frame = -3
Query: 415 TLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMD 236
TLG + R++VVDD++VN + L+ +G E T A+SG+EA+ LL+ FDA MD
Sbjct: 451 TLGPSISGLRVLVVDDHVVNRRAVELVLQPFGVEATLAESGEEALELLR-SEVFDAILMD 509
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+ MP MDG E T+ +R G+ P P++A+TA E C
Sbjct: 510 VYMPGMDGRETTRTLRA-----------GQGPNR-------DAPVVAVTASATIKDWEAC 551
Query: 55 LKSEMDGYVSKPFEGEQL 2
+ M+ +V+KP + +L
Sbjct: 552 AAAGMNAHVAKPIDPAEL 569
>ref|ZP_00136151.1| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 772
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN VN VA G L K G +V A+ G A+ +L+ H D MD MP MDG+
Sbjct: 650 RVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKMLEE-HPIDLVLMDCNMPVMDGY 708
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWR-TPILAMTADVIQATHEQCLKSEMDGY 32
EAT++IR R W PI+A+TA+ + E+C + MD Y
Sbjct: 709 EATRQIRDSGR--------------------WGGLPIIALTANALPDERERCRAAGMDDY 748
Query: 31 VSKPFEGEQL 2
++KPF ++L
Sbjct: 749 LAKPFHRDEL 758
>gb|AAK54091.2| histidine kinase DhkJ [Dictyostelium discoideum]
Length = 2062
Score = 77.4 bits (189), Expect = 6e-13
Identities = 46/128 (35%), Positives = 69/128 (53%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+K+G V A++G +A+ + FD MD+QMP GFE
Sbjct: 1731 ILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAVASSQL-RKFDLILMDVQMPHCGGFE 1789
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR E + G+ TPI+AMTA + +CL++ MD Y+S
Sbjct: 1790 ATAQIRKREHEQ--------------GIH---TPIIAMTAHALARDRVKCLEAGMDDYIS 1832
Query: 25 KPFEGEQL 2
KP +QL
Sbjct: 1833 KPINPDQL 1840
>ref|XP_642053.1| histidine kinase [Dictyostelium discoideum]
gb|EAL68114.1| histidine kinase [Dictyostelium discoideum]
Length = 2062
Score = 77.4 bits (189), Expect = 6e-13
Identities = 46/128 (35%), Positives = 69/128 (53%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFE 206
I++ +DN VN ++A L+K+G V A++G +A+ + FD MD+QMP GFE
Sbjct: 1731 ILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAVASSQL-RKFDLILMDVQMPHCGGFE 1789
Query: 205 ATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVS 26
AT +IR E + G+ TPI+AMTA + +CL++ MD Y+S
Sbjct: 1790 ATAQIRKREHEQ--------------GIH---TPIIAMTAHALARDRVKCLEAGMDDYIS 1832
Query: 25 KPFEGEQL 2
KP +QL
Sbjct: 1833 KPINPDQL 1840
>ref|ZP_01019711.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Polaromonas naphthalenivorans CJ2]
gb|EAQ21723.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Polaromonas naphthalenivorans CJ2]
Length = 1124
Score = 77.4 bits (189), Expect = 6e-13
Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Frame = -3
Query: 517 IMKPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKK-------RIIVVDDNIV 359
++KP R + L +L R L +S L S+ ++ I+V DDN+V
Sbjct: 817 LLKPARQNQLFEALARCL------------TSDSVLQSIKAERVDIRKNVTILVADDNVV 864
Query: 358 NLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN----FDACFMDIQMPEMDGFEATKRI 191
NLKVA G L + G + A G +A+T + N F A MD+ MP MDG EAT+ I
Sbjct: 865 NLKVACGILARLGYDAVTAADGVQAVTAVADSMNSARRFGAILMDLHMPGMDGLEATQTI 924
Query: 190 RVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEG 11
+ G A P PI+A+TAD E+C + MD Y++KP +
Sbjct: 925 KK---------RFGHAAP----------PIIALTADASIEDRERCEAAGMDDYLTKPLQV 965
Query: 10 EQL 2
+L
Sbjct: 966 VEL 968
Score = 51.6 bits (122), Expect = 3e-05
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -3
Query: 400 LHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPE 221
L KR++VVDD+ VN++V L+++G V A SG A+ +L D D+ MP
Sbjct: 716 LQDKRVLVVDDHHVNVRVLMRQLRQWGMRVASAVSGAAALDVLDHTQLPDVIITDMHMPG 775
Query: 220 MDGFEATKRIR 188
MDG E IR
Sbjct: 776 MDGLELAGHIR 786
>ref|YP_432128.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC27703.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 1263
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN---FDACFMDIQMPEM 218
R+++V+DN +N +VA L++ G A +G EA+ L+ ++ MD QMPEM
Sbjct: 994 RLLLVEDNQINQEVAQLMLEEMGLPADVAGNGLEALAALQSAPEDAPYNLVLMDCQMPEM 1053
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DG+EAT++IR G+A G R PI+AMTA+ ++ E+CL + MD
Sbjct: 1054 DGYEATRQIRA-----------GKA-----GERNRHIPIIAMTANAMKGDREKCLAAGMD 1097
Query: 37 GYVSKP 20
Y+SKP
Sbjct: 1098 DYLSKP 1103
Score = 47.8 bits (112), Expect = 5e-04
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Frame = -3
Query: 385 IIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHN---------FDACFMDI 233
++VVDDN N +V G L+ +GA V SG+EA+ + + N FD +D+
Sbjct: 824 LLVVDDNAANREVLCGQLRMWGAHVLETASGEEALAMCEAKINGSPAAFGRPFDIAILDM 883
Query: 232 QMPEMDG 212
MP+MDG
Sbjct: 884 HMPQMDG 890
>gb|AAG06212.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
ref|NP_251514.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
Length = 786
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
R+++V+DN VN VA G L K G +V A+ G A+ +L+ H D MD MP MDG+
Sbjct: 664 RVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKMLEE-HPIDLVLMDCNMPVMDGY 722
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWR-TPILAMTADVIQATHEQCLKSEMDGY 32
EAT++IR R W PI+A+TA+ + E+C + MD Y
Sbjct: 723 EATRQIRDSGR--------------------WGGLPIIALTANALPDERERCRAAGMDDY 762
Query: 31 VSKPFEGEQL 2
++KPF ++L
Sbjct: 763 LAKPFHRDEL 772
>gb|AAZ36830.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
ref|YP_275771.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 782
Score = 77.4 bits (189), Expect = 6e-13
Identities = 56/170 (32%), Positives = 85/170 (50%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGAL 332
+PL + L +L+R LG ++ R+ T + R+++V+DN VN VA G L
Sbjct: 623 RPLARNALYHTLRRVLGQ-EETGVRDTKAPEQTAQRMA---RVLLVEDNPVNQLVAKGIL 678
Query: 331 KKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIER 152
K G EV + G EA+ L+ H FD MD MP MDG+EA+++IR R N
Sbjct: 679 GKLGCEVIISSHGGEALEQLEQGH-FDLVLMDCNMPVMDGYEASRQIRSSGRWPN----- 732
Query: 151 GEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
PI+A+TA+ + E+C + M+ Y++KPF +L
Sbjct: 733 --------------LPIVALTANAMPDERERCKAAGMNDYLAKPFRRAEL 768
>ref|ZP_00512954.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
limicola DSM 245]
gb|EAM42380.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
limicola DSM 245]
Length = 691
Score = 77.4 bits (189), Expect = 6e-13
Identities = 48/124 (38%), Positives = 69/124 (55%)
Frame = -3
Query: 391 KRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDG 212
++I++V+DNI+N +VA L K V A +G EAI LK + + FMD+QMP M G
Sbjct: 566 RKILLVEDNIINQQVATAMLSKLNFPVDTAMNGLEAIDALK-KNTYALVFMDLQMPVMGG 624
Query: 211 FEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGY 32
EA K IR E G A P+ PI+AMTA+ IQ ++CL++ M+ +
Sbjct: 625 LEAVKTIR--------NKETGTADPD--------IPIIAMTANAIQKDKDECLQAGMNDF 668
Query: 31 VSKP 20
+ KP
Sbjct: 669 IIKP 672
>ref|YP_444628.1| histidine kinase DhkJ [Salinibacter ruber DSM 13855]
gb|ABC46267.1| histidine kinase DhkJ [Salinibacter ruber DSM 13855]
Length = 1346
Score = 77.4 bits (189), Expect = 6e-13
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGIDKLHCRNGVVGNS--TLGSLLHKKRIIVVDDNIVNLKVAAG 338
KP++ S L +L L G + NG G G +R+++ +D+ VN +
Sbjct: 1171 KPIKQSSLHDTLTALLTGRE-----NGGSGRDGDRSGPDSPSRRVLLAEDDAVNRTMTTQ 1225
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L+K G EV A G EA+ ++ +DA MD+QMPE+DG EAT+R+
Sbjct: 1226 LLEKMGHEVYTASDGAEALAAVRD-QAYDAILMDVQMPELDGLEATRRL----------- 1273
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
R E P E + ++A+TA V + +CL++ MD ++SKP ++L
Sbjct: 1274 -RNEMPSE------EQPYVVALTASVTEDDRRRCLEAGMDAFLSKPIRKDEL 1318
>ref|ZP_00108815.1| COG0642: Signal transduction histidine kinase [Nostoc punctiforme PCC
73102]
Length = 1559
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = -3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL-KPPHNFDACFMDIQMPE 221
HK RI++ +DN+VN KVA L+ G A +GKE + LL K P +D MD QMP
Sbjct: 1301 HKLRILLAEDNLVNQKVALKQLQSLGYSADVAGNGKEVLQLLEKIP--YDLILMDCQMPV 1358
Query: 220 MDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEM 41
+DG E TK I + E V R ++AMTA+ ++ + CL + M
Sbjct: 1359 LDGLETTKEIHRWQ--------------ESSFVSSRRPVVIAMTANAMKEDQQMCLDAGM 1404
Query: 40 DGYVSKPFEGEQL 2
D Y+SKP E+L
Sbjct: 1405 DDYLSKPVIKEKL 1417
Score = 42.4 bits (98), Expect = 0.020
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Frame = -3
Query: 403 LLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL----KPPHNFDACFMD 236
LL +R++VVDDN N K+ ++G V A S A+ + K + +D +D
Sbjct: 1136 LLINRRLLVVDDNATNRKIIHHQATRWGMLVDQAASATIALKAIEETAKQKNLYDIAVID 1195
Query: 235 IQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQC 56
+ MPE+DG L EQI+ A G+ P++ +T+ + ++
Sbjct: 1196 MHMPEVDGM-----------TLGEQIKANSA---IAGL-----PLIMLTSTNQRDEIQRA 1236
Query: 55 LKSEMDGYVSKPFEGEQL 2
LK Y+ KP + +L
Sbjct: 1237 LKIGFAAYLVKPVKPSRL 1254
>ref|ZP_01109674.1| sensory box histidine kinase/response regulator [Alteromonas
macleodii 'Deep ecotype']
gb|EAR06041.1| sensory box histidine kinase/response regulator [Alteromonas
macleodii 'Deep ecotype']
Length = 1070
Score = 77.4 bits (189), Expect = 6e-13
Identities = 60/202 (29%), Positives = 91/202 (45%)
Frame = -3
Query: 619 TLYQPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHC 440
++ QP L+ E+P+ ++N R N I KP S L LQ +
Sbjct: 751 SIKQPKVIMLYAFESPRMREQANQLGIR----NFIKKPFSTSELVDKLQELCLNVKT--- 803
Query: 439 RNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPH 260
+ + L RI+ +DN +N KV G L A + A++G EAI++L+
Sbjct: 804 -KALPKDKPTVPNLKGTRILFAEDNALNQKVTLGLLSDTHATIEVANNGLEAISILRKDS 862
Query: 259 NFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADV 80
FD MDIQMP MDG A K IR E++ + PI+A TA
Sbjct: 863 AFDVVLMDIQMPVMDGLTAAKHIR-------EEL-------------KLTLPIIATTAHA 902
Query: 79 IQATHEQCLKSEMDGYVSKPFE 14
+Q ++ L + MDG+++KP +
Sbjct: 903 MQQDIDKSLAAGMDGHINKPVD 924
>gb|AAZ48079.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
ref|YP_286549.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
Length = 923
Score = 77.4 bits (189), Expect = 6e-13
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Frame = -3
Query: 511 KPLRASMLQVSLQRALGGIDKLHCRNGVVGNSTLGSLLHKKR--IIVVDDNIVNLKVAAG 338
KP+R + L +++ L R V + + S K R ++V +DN NL VA
Sbjct: 622 KPVRQAELLRAIETTLQ-------RRSVSDTAVIDSPARKLRGRVLVAEDNESNLVVARA 674
Query: 337 ALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQI 158
L++ G EV A G++A+ +L D MD QMP +DGF AT +R E
Sbjct: 675 QLERMGLEVIAASDGQQALDILAE-ETVDLVLMDCQMPVLDGFAATMALRERE------- 726
Query: 157 ERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
V P++A+TA+ ++ E+C + MD Y++KP+ GE+L
Sbjct: 727 ----------AVSGRHLPVIALTANAMKGDRERCKDAGMDEYLAKPYSGEEL 768
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,803,328,272
Number of Sequences: 3454138
Number of extensions: 38280951
Number of successful extensions: 102962
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 94399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97437
length of database: 1,185,965,366
effective HSP length: 128
effective length of database: 743,835,702
effective search space used: 101905491174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)