BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594433.2.1
(766 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC77529.1| replication protein A 70b [Oryza sativa (ja... 278 2e-73
gb|AAB71836.1| replication protein A1 [Oryza sativa] 278 2e-73
ref|NP_196419.1| DNA binding / nucleic acid binding [Arabid... 212 1e-53
ref|NP_200908.1| DNA binding / nucleic acid binding [Arabid... 208 2e-52
dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana] 208 2e-52
gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus ... 99 1e-19
gb|AAW42928.1| damaged DNA binding protein, putative [Crypt... 99 1e-19
dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa (... 97 8e-19
ref|XP_507007.1| PREDICTED OSJNBb0013K01.36 gene product [O... 97 8e-19
ref|NP_973433.1| DNA binding / nucleic acid binding [Arabid... 92 3e-17
ref|NP_178690.1| DNA binding / nucleic acid binding [Arabid... 92 3e-17
ref|XP_503990.1| hypothetical protein [Yarrowia lipolytica]... 90 1e-16
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum] 87 5e-16
gb|AAU05383.1| replication protein A 70 kDa subunit [Ustila... 87 9e-16
ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago m... 87 9e-16
ref|NP_199353.1| DNA binding / nucleic acid binding [Arabid... 86 2e-15
ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Enceph... 84 6e-15
ref|XP_451388.1| unnamed protein product [Kluyveromyces lac... 83 1e-14
ref|XP_719663.1| hypothetical protein CaO19_9640 [Candida a... 83 1e-14
ref|XP_749761.1| replication protein A 70 kDa DNA-binding s... 82 2e-14
emb|CAG08885.1| unnamed protein product [Tetraodon nigrovir... 82 3e-14
emb|CAD21282.1| probable single-stranded DNA-binding protei... 80 6e-14
gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [S... 80 8e-14
emb|CAA94241.1| replication protein A [Drosophila melanogas... 79 2e-13
emb|CAA22533.1| ssb1 [Schizosaccharomyces pombe] >gi|191118... 79 2e-13
emb|CAG59321.1| unnamed protein product [Candida glabrata C... 79 2e-13
ref|NP_001016043.1| replication protein A1, 70kDa [Xenopus ... 79 2e-13
emb|CAG08929.1| unnamed protein product [Tetraodon nigrovir... 78 4e-13
ref|NP_567576.1| DNA binding / nucleic acid binding [Arabid... 77 7e-13
emb|CAB78915.1| replication A protein-like [Arabidopsis tha... 77 7e-13
ref|XP_650233.1| replication factor A protein 1 [Entamoeba ... 77 7e-13
gb|AAB63407.1| Hypothetical protein F18A1.5 [Caenorhabditis... 77 7e-13
emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae] >... 76 1e-12
gb|AAT68105.1| replication protein A 70kd subunit [Danio re... 75 2e-12
ref|XP_702119.1| PREDICTED: hypothetical protein XP_697027 ... 75 2e-12
emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis... 75 3e-12
gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895] >gi|45... 75 3e-12
gb|AAH70559.1| LOC397937 protein [Xenopus laevis] 75 3e-12
dbj|BAD69789.1| Replication protein A large subunit [Bombyx... 74 4e-12
ref|XP_786722.1| PREDICTED: similar to replication protein ... 74 6e-12
ref|XP_792076.1| PREDICTED: similar to replication protein ... 74 6e-12
gb|EAL27901.1| GA21928-PA [Drosophila pseudoobscura] 74 6e-12
pdb|1L1O|F Chain F, Structure Of The Human Replication Prot... 73 1e-11
dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo... 73 1e-11
gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]... 73 1e-11
emb|CAH92206.1| hypothetical protein [Pongo pygmaeus] >gi|7... 73 1e-11
ref|XP_548316.2| PREDICTED: similar to Replication protein ... 73 1e-11
ref|XP_868487.1| PREDICTED: similar to Replication protein ... 73 1e-11
ref|XP_868491.1| PREDICTED: similar to Replication protein ... 73 1e-11
ref|XP_581025.2| PREDICTED: similar to Replication protein ... 72 2e-11
emb|CAG32101.1| hypothetical protein [Gallus gallus] >gi|57... 72 2e-11
gb|AAP92635.1| Cb1-727 [Rattus norvegicus] >gi|62656540|ref... 72 3e-11
dbj|BAE02429.1| unnamed protein product [Macaca fascicularis] 71 4e-11
dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae] 71 4e-11
gb|AAU44205.1| unknown protein [Oryza sativa (japonica cult... 71 4e-11
dbj|BAE39655.1| unnamed protein product [Mus musculus] >gi|... 71 5e-11
gb|AAH19119.1| Replication protein A1 [Mus musculus] >gi|56... 71 5e-11
dbj|BAE31105.1| unnamed protein product [Mus musculus] 71 5e-11
ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus... 70 6e-11
ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella... 70 8e-11
gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium ... 68 4e-10
emb|CAG84575.1| unnamed protein product [Debaryomyces hanse... 68 4e-10
ref|XP_765009.1| replication factor A protein [Theileria pa... 67 7e-10
gb|AAR84278.1| putative replication protein A subunit 1 [Le... 66 2e-09
gb|AAK84867.1| replication protein A subunit 1 [Leishmania ... 66 2e-09
emb|CAJ05550.1| replication factor A, 51kDa subunit, putati... 65 2e-09
emb|CAA80682.1| replication protein A 51 kilodalton subunit... 63 1e-08
gb|EAA01767.2| ENSANGP00000015823 [Anopheles gambiae str. P... 62 2e-08
emb|CAI74544.1| replication factor A-related protein, putat... 62 2e-08
ref|NP_189742.1| unknown protein [Arabidopsis thaliana] 60 7e-08
ref|XP_828978.1| replication factor A 51kDa subunit [Trypan... 60 7e-08
gb|EAR92088.1| hypothetical protein TTHERM_00106890 [Tetrah... 60 1e-07
ref|XP_819019.1| replication factor A, 51kDa subunit [Trypa... 57 6e-07
ref|NP_178764.1| unknown protein [Arabidopsis thaliana] >gi... 56 1e-06
emb|CAI74881.1| replication factor-a protein 1, putative [T... 55 3e-06
ref|XP_764664.1| replication factor A protein [Theileria pa... 53 1e-05
dbj|BAB11360.1| replication protein A1-like protein [Arabid... 52 2e-05
ref|NP_198524.1| unknown protein [Arabidopsis thaliana] 52 2e-05
ref|NP_174826.1| unknown protein [Arabidopsis thaliana] >gi... 51 4e-05
ref|NP_175703.1| unknown protein [Arabidopsis thaliana] >gi... 51 4e-05
dbj|BAB02796.1| replication protein A1-like [Arabidopsis th... 50 7e-05
ref|NP_187935.1| unknown protein [Arabidopsis thaliana] 50 7e-05
ref|XP_667409.1| replication protein A large subunit [Crypt... 48 4e-04
gb|AAD42062.1| replication protein A large subunit [Cryptos... 48 4e-04
dbj|BAB10788.1| replication protein A1-like [Arabidopsis th... 48 4e-04
ref|NP_198346.1| unknown protein [Arabidopsis thaliana] 48 4e-04
ref|XP_626789.1| replication protein A1 large subunit [Cryp... 48 4e-04
ref|XP_739325.1| replication factor a protein [Plasmodium c... 47 0.001
ref|XP_724343.1| replication A protein [Plasmodium yoelii y... 46 0.001
ref|XP_680439.1| replication factor a protein [Plasmodium b... 46 0.001
ref|NP_568511.1| unknown protein [Arabidopsis thaliana] 46 0.001
ref|XP_511254.1| PREDICTED: replication protein A1, 70kDa [... 46 0.002
ref|NP_189797.1| unknown protein [Arabidopsis thaliana] >gi... 44 0.005
ref|NP_189826.1| unknown protein [Arabidopsis thaliana] >gi... 44 0.005
gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza s... 44 0.006
gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza s... 44 0.006
gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza s... 44 0.006
gb|AAV44036.1| hypothetical protein [Oryza sativa (japonica... 44 0.006
ref|NP_178584.2| unknown protein [Arabidopsis thaliana] 43 0.011
gb|AAM15454.1| putative replication protein A1 [Arabidopsis... 43 0.011
emb|CAB62873.1| replication factor a protein, putative [Pla... 43 0.014
gb|EAS00303.1| hypothetical protein TTHERM_00218760 [Tetrah... 42 0.019
ref|XP_476960.1| DNA binding protein-like [Oryza sativa (ja... 42 0.019
gb|AAW71479.1| replication protein A large subunit [Cryptos... 42 0.024
gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza s... 42 0.024
ref|XP_666551.1| replication protein A 70kDa [Cryptosporidi... 42 0.024
ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium pa... 42 0.024
ref|NP_198305.1| unknown protein [Arabidopsis thaliana] 42 0.032
ref|NP_919093.1| DNA binding protein-like [Oryza sativa (ja... 41 0.042
dbj|BAA31015.1| 361aa long hypothetical protein [Pyrococcus... 41 0.054
dbj|BAB01022.1| replication protein A1-like [Arabidopsis th... 40 0.071
ref|NP_189676.1| unknown protein [Arabidopsis thaliana] 40 0.071
emb|CAB49209.1| RPA41 subunit of the hetero-oligomeric comp... 40 0.12
ref|NP_178646.1| unknown protein [Arabidopsis thaliana] >gi... 39 0.16
ref|XP_477680.1| replication protein-like [Oryza sativa (ja... 39 0.21
dbj|BAD81690.1| helicase-like protein [Oryza sativa (japoni... 39 0.21
ref|NP_567321.1| unknown protein [Arabidopsis thaliana] >gi... 39 0.27
ref|XP_636195.1| hypothetical protein DDB0188462 [Dictyoste... 38 0.35
ref|NP_850112.1| unknown protein [Arabidopsis thaliana] >gi... 38 0.35
gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza s... 38 0.46
gb|AAU44445.1| hypothetical protein AT2G05642 [Arabidopsis ... 38 0.46
ref|XP_796317.1| PREDICTED: similar to toll-like receptor 4... 38 0.46
gb|ABA96519.1| hypothetical protein LOC_Os12g06230 [Oryza s... 38 0.46
ref|XP_472095.1| OSJNBa0061G20.6 [Oryza sativa (japonica cu... 37 0.60
ref|XP_745376.1| replication factor A-related protein [Plas... 37 0.60
gb|ABA94881.1| hypothetical protein LOC_Os11g40920 [Oryza s... 37 0.79
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza s... 37 0.79
ref|NP_198375.1| unknown protein [Arabidopsis thaliana] 37 1.0
ref|XP_778757.1| hypothetical protein GLP_82_33470_32019 [G... 37 1.0
gb|AAD15369.1| putative replication protein A1 [Arabidopsis... 37 1.0
gb|AAD15477.1| putative replication protein A1 [Arabidopsis... 37 1.0
gb|AAL82144.1| replication factor A related protein [Pyroco... 36 1.3
dbj|BAB47563.1| RPA41 [Pyrococcus furiosus] 36 1.3
gb|AAB85861.1| replication factor A related protein [Methan... 36 1.8
ref|XP_725495.1| replication protein A large subunit [Plasm... 36 1.8
gb|ABD65118.1| hypothetical protein 31.t00031 [Brassica ole... 36 1.8
ref|XP_656777.1| replication factor A-related protein [Enta... 36 1.8
gb|AAT82272.1| thiazole biosynthesis protein ThiG [Propioni... 35 2.3
ref|NP_918352.1| replication protein-like [Oryza sativa (ja... 35 2.3
ref|XP_680462.1| replication factor A-related protein [Plas... 35 2.3
ref|NP_179052.2| unknown protein [Arabidopsis thaliana] 35 2.3
ref|XP_749668.1| C6 transcription factor [Aspergillus fumig... 35 3.0
ref|XP_466062.1| replication protein-like [Oryza sativa (ja... 35 3.9
ref|XP_466063.1| replication protein-like [Oryza sativa (ja... 35 3.9
emb|CAD51733.1| replication factor A-related protein, putat... 35 3.9
ref|NP_917821.1| OSJNBb0035I14.14 [Oryza sativa (japonica c... 34 5.1
ref|XP_581841.2| PREDICTED: similar to Stabilin-1 precursor... 34 6.7
gb|AAH31166.1| Stab1 protein [Mus musculus] 33 8.7
gb|AAS55083.1| UDP-glucose glucosyltransferase [Rhodiola sa... 33 8.7
gb|AAL91671.2| stabilin-1 [Mus musculus] >gi|20149762|ref|N... 33 8.7
ref|ZP_00904727.1| Twin-arginine translocation pathway sign... 33 8.7
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa (japonica cultivar-group)]
Length = 630
Score = 278 bits (710), Expect = 2e-73
Identities = 126/146 (86%), Positives = 139/146 (95%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLRYIMV+KVSDPTGEAW+S+
Sbjct: 485 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSL 544
Query: 556 FNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
FN+ AE+I+GCSADELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRIT
Sbjct: 545 FNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRIT 604
Query: 376 VRSEAPVEHAAESKYLLEQIAKLTAC 299
VRSEAPV+HAAE+KY+LE+IAKLT C
Sbjct: 605 VRSEAPVDHAAEAKYMLEEIAKLTGC 630
>gb|AAB71836.1| replication protein A1 [Oryza sativa]
Length = 630
Score = 278 bits (710), Expect = 2e-73
Identities = 126/146 (86%), Positives = 139/146 (95%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLRYIMV+KVSDPTGEAW+S+
Sbjct: 485 IKPDQTMWYRACKTCNKKVTEAMGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSL 544
Query: 556 FNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
FN+ AE+I+GCSADELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRIT
Sbjct: 545 FNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRIT 604
Query: 376 VRSEAPVEHAAESKYLLEQIAKLTAC 299
VRSEAPV+HAAE+KY+LE+IAKLT C
Sbjct: 605 VRSEAPVDHAAEAKYMLEEIAKLTGC 630
>ref|NP_196419.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
emb|CAB62614.1| replication factor A-like protein [Arabidopsis thaliana]
Length = 604
Score = 212 bits (540), Expect = 1e-53
Identities = 96/143 (67%), Positives = 117/143 (81%), Gaps = 1/143 (0%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWYRACKTCNKKVTE SGYWCE CQK D ECSLRYIM VKVSD TGE W+S
Sbjct: 457 IKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSA 516
Query: 556 FNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRI 380
FN+ AEKIIGC+AD+L+ ++ EEG+ + + KLKEATW HLFR+SV+Q EYN+EKRQRI
Sbjct: 517 FNDEAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRI 576
Query: 379 TVRSEAPVEHAAESKYLLEQIAK 311
TVR +P++ AAE++ LL+ I+K
Sbjct: 577 TVRGVSPIDFAAETRLLLQDISK 599
>ref|NP_200908.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAO41995.1| putative RNA helicase [Arabidopsis thaliana]
Length = 629
Score = 208 bits (529), Expect = 2e-52
Identities = 93/142 (65%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWY+ACKTCNKKVTE SGYWCEGCQ+ ECSLRYIM VKV+D +GE W+S
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540
Query: 556 FNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRI 380
FN+ AEKI+GCSADEL++++ EEG+ + Y KLKEATW H+FRVSVTQ+EYN EKRQR+
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600
Query: 379 TVRSEAPVEHAAESKYLLEQIA 314
TV+ AP++ AAE++ LL+ I+
Sbjct: 601 TVKGVAPLDFAAETRLLLQDIS 622
>dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
Length = 253
Score = 208 bits (529), Expect = 2e-52
Identities = 93/142 (65%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWY+ACKTCNKKVTE SGYWCEGCQ+ ECSLRYIM VKV+D +GE W+S
Sbjct: 105 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 164
Query: 556 FNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRI 380
FN+ AEKI+GCSADEL++++ EEG+ + Y KLKEATW H+FRVSVTQ+EYN EKRQR+
Sbjct: 165 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 224
Query: 379 TVRSEAPVEHAAESKYLLEQIA 314
TV+ AP++ AAE++ LL+ I+
Sbjct: 225 TVKGVAPLDFAAETRLLLQDIS 246
>gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 99.4 bits (246), Expect = 1e-19
Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = -1
Query: 712 YRACKT---CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
Y AC C KKV E GSG+WCE CQ+ E RYI+ + V D TG+ W++ FNE A
Sbjct: 474 YPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNETA 532
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEA 362
E+I+G SA++L +++ E D Y + +AT ++F++ Q +N++ R R R A
Sbjct: 533 EQIMGISANDLMKLKNEGNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRKVA 592
Query: 361 PVEHAAESKYLLEQIAKLT 305
P ++ A+S +L + I++++
Sbjct: 593 PPDYVADSAHLSQMISQMS 611
>gb|AAW42928.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_570235.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 597
Score = 99.4 bits (246), Expect = 1e-19
Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = -1
Query: 712 YRACKT---CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
Y AC C KKV E GSG+WCE CQ+ E RYI+ + V D TG+ W++ FNE A
Sbjct: 459 YPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNETA 517
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEA 362
E+I+G SA++L +++ E D Y + +AT ++F++ Q +N++ R R R A
Sbjct: 518 EQIMGISANDLMKLKNEGNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRKVA 577
Query: 361 PVEHAAESKYLLEQIAKLT 305
P ++ A+S +L + I++++
Sbjct: 578 PPDYVADSAHLSQMISQMS 596
>dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)]
Length = 654
Score = 96.7 bits (239), Expect = 8e-19
Identities = 47/148 (31%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Frame = -1
Query: 727 DQNMWYRAC------KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAW 566
+++ +Y AC + CNKKVT++ + C+ C + EC RY++ ++ D +G AW
Sbjct: 506 NESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAW 565
Query: 565 VSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQ 386
V+ F E ++++GCSA EL+ + KE D +A + + +L R+ V + Y +E++
Sbjct: 566 VTAFQEAGQELLGCSATELNAL-KEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKV 624
Query: 385 RITVRSEAPVEHAAESKYLLEQIAKLTA 302
+ T V+ + ESK+LL+ I+K +A
Sbjct: 625 KNTAVKVEKVDPSGESKFLLDLISKSSA 652
>ref|XP_507007.1| PREDICTED OSJNBb0013K01.36 gene product [Oryza sativa (japonica
cultivar-group)]
ref|XP_468069.1| replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17384.1| replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)]
dbj|BAD16963.1| replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)]
Length = 656
Score = 96.7 bits (239), Expect = 8e-19
Identities = 47/148 (31%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Frame = -1
Query: 727 DQNMWYRAC------KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAW 566
+++ +Y AC + CNKKVT++ + C+ C + EC RY++ ++ D +G AW
Sbjct: 508 NESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAW 567
Query: 565 VSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQ 386
V+ F E ++++GCSA EL+ + KE D +A + + +L R+ V + Y +E++
Sbjct: 568 VTAFQEAGQELLGCSATELNAL-KEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKV 626
Query: 385 RITVRSEAPVEHAAESKYLLEQIAKLTA 302
+ T V+ + ESK+LL+ I+K +A
Sbjct: 627 KNTAVKVEKVDPSGESKFLLDLISKSSA 654
>ref|NP_973433.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
Length = 617
Score = 91.7 bits (226), Expect = 3e-17
Identities = 43/141 (30%), Positives = 82/141 (58%), Gaps = 7/141 (4%)
Frame = -1
Query: 712 YRAC------KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
Y AC K CNKKVT + + + C+ C + EC RY++ V++ D TG W++ F
Sbjct: 477 YTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQ 536
Query: 550 EHAEKIIGCSADELDRIRKE-EGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITV 374
E E+I+GC A +L ++ E E ++ +A +++ + ++ ++ + + Y +E+R ++TV
Sbjct: 537 ETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTV 596
Query: 373 RSEAPVEHAAESKYLLEQIAK 311
V + +ESKY+L+ + +
Sbjct: 597 VKVDKVNYTSESKYMLDLLVR 617
>ref|NP_178690.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana]
gb|AAO64881.1| At2g06510 [Arabidopsis thaliana]
dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 640
Score = 91.7 bits (226), Expect = 3e-17
Identities = 43/141 (30%), Positives = 82/141 (58%), Gaps = 7/141 (4%)
Frame = -1
Query: 712 YRAC------KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
Y AC K CNKKVT + + + C+ C + EC RY++ V++ D TG W++ F
Sbjct: 500 YTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQ 559
Query: 550 EHAEKIIGCSADELDRIRKE-EGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITV 374
E E+I+GC A +L ++ E E ++ +A +++ + ++ ++ + + Y +E+R ++TV
Sbjct: 560 ETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTV 619
Query: 373 RSEAPVEHAAESKYLLEQIAK 311
V + +ESKY+L+ + +
Sbjct: 620 VKVDKVNYTSESKYMLDLLVR 640
>ref|XP_503990.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79583.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 589
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
N Y AC+T CNKKV E G + CE C+KN + RYI+ + V D TG W++ FNE
Sbjct: 450 NFAYPACQTPDCNKKVVE-HGDEWRCEKCEKNMDKPLYRYILSINVGDATGSMWLTAFNE 508
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRS 368
AE I+G +AD+L I+ +GDD + +++ T + R Q YN E + R V +
Sbjct: 509 PAEVIMGMTADQLTEIQTSQGDDEFEQAVQKVTGKQYTLRCRSKQEFYNEESKARHQVLT 568
Query: 367 EAPVEHAAESKYLLEQI 317
+++ + L++ +
Sbjct: 569 AQALDYLKDIDELIKDL 585
>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
Length = 637
Score = 87.4 bits (215), Expect = 5e-16
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Frame = -1
Query: 712 YRAC------KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
Y AC + CNKKVT + + + C+ C + EC RY++ ++ D TG WV+ F
Sbjct: 493 YTACPLMIGDRQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQ 552
Query: 550 EHAEKIIGCSADELDRIRKEEGDDS-YALKLKEATWVPHLFRVSVTQHEYNNEKRQRITV 374
E E+I+G A EL ++ E+ DD + +K + +FR+ + + Y E++ + TV
Sbjct: 553 EGGEEIMGYPAKELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTV 612
Query: 373 RSEAPVEHAAESKYLLEQIAK 311
V ++AES+Y+L+ I+K
Sbjct: 613 VKADKVNYSAESRYMLDLISK 633
>gb|AAU05383.1| replication protein A 70 kDa subunit [Ustilago maydis]
Length = 623
Score = 86.7 bits (213), Expect = 9e-16
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N++Y AC + CNKKV + + CE C ++ + RYI+ V+D TG+ W+S FN
Sbjct: 483 ENLYYTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQMWLSGFN 542
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E A ++IG SA EL ++R EE + ++ L A ++F +N+ R R T+
Sbjct: 543 EDATQLIGMSAGELHKLR-EESESEFSAALHRAANRMYMFNCRAKMDTFNDTARVRYTIS 601
Query: 370 SEAPVEHAAESKYLLEQI 317
APV+ A L++ I
Sbjct: 602 RAAPVDFAKAGMELVDAI 619
>ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
gb|EAK83030.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
Length = 623
Score = 86.7 bits (213), Expect = 9e-16
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N++Y AC + CNKKV + + CE C ++ + RYI+ V+D TG+ W+S FN
Sbjct: 483 ENLYYTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQMWLSGFN 542
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E A ++IG SA EL ++R EE + ++ L A ++F +N+ R R T+
Sbjct: 543 EDATQLIGMSAGELHKLR-EESESEFSAALHRAANRMYMFNCRAKMDTFNDTARVRYTIS 601
Query: 370 SEAPVEHAAESKYLLEQI 317
APV+ A L++ I
Sbjct: 602 RAAPVDFAKAGMELVDAI 619
>ref|NP_199353.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
dbj|BAB09168.1| replication protein A1-like [Arabidopsis thaliana]
Length = 853
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Frame = -1
Query: 724 QNMWYRAC------KTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAW 566
+N Y AC + C+KKVT G G W CE C K EC RYI+ +++ D T W
Sbjct: 595 ENFCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTW 653
Query: 565 VSVFNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKR 389
+ F E E+I+G SA +L ++ E D + + ++ + ++F++ + + Y++E+R
Sbjct: 654 ATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQR 713
Query: 388 QRITVRSEAPVEHAAESKYLLEQIAKL 308
+ TV + +++ ++++LE I KL
Sbjct: 714 VKATVVKAEKLNYSSNTRFMLEAIDKL 740
>ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
emb|CAD25779.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 623
Score = 84.0 bits (206), Expect = 6e-15
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = -1
Query: 727 DQNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVF 554
+ +WY +CK CNKKV G Y CE C +C RY++ + + D +G+ WVS+F
Sbjct: 483 EDGLWYTSCKGEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFSGQMWVSLF 542
Query: 553 NEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITV 374
+E A G SA E+ ++ EE ++ + LFR+ Q YN+E R R +
Sbjct: 543 DEVATSFFGISAREM-KVMSEEAPGELQALIRRMYFRECLFRIKSKQDSYNDEIRMRYSG 601
Query: 373 RSEAPVEHAAESKYLLEQIAKL 308
S ++ ESK LL I K+
Sbjct: 602 LSVENLDILKESKRLLGVIEKM 623
>ref|XP_451388.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH02976.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 621
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Frame = -1
Query: 736 LKPDQNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
LK D N Y AC + C KKV + CE C N RY++ + + D TG+ W+
Sbjct: 478 LKVD-NFAYPACLNEGCQKKVIMQSDGTWRCEKCDMNHPHPKYRYMLTISIMDQTGQIWL 536
Query: 562 SVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQR 383
++FN+ AE+++G SA+EL + KE + ++ ++ + FR+ + YNNE R R
Sbjct: 537 TLFNDQAEQLVGVSANELTEL-KENNNQAFVALTQKVQMNEYDFRIRAREDNYNNETRIR 595
Query: 382 ITVRSEAPVEHAAESKYLLEQIAK 311
TV + + AE+ +L ++ K
Sbjct: 596 YTVANLHDLRWKAEADFLAAELLK 619
>ref|XP_719663.1| hypothetical protein CaO19_9640 [Candida albicans SC5314]
ref|XP_719539.1| hypothetical protein CaO19_2093 [Candida albicans SC5314]
gb|EAL00787.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gb|EAL00659.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
Length = 624
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Frame = -1
Query: 709 RACKTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
R + CNKK+ G W CE C K E + RY++ V+D TG WV++FN+ AEK+
Sbjct: 489 RPAQVCNKKLVFQDNDGTWRCERCAKTYEEPTWRYVLSCSVTDSTGHMWVTLFNDQAEKL 548
Query: 532 IGCSADELDRIRKEEGDDSYALKLKEATWVPHL-FRVSVTQHEYNNEKRQRITVRSEAPV 356
+G A EL ++K+E A ++ T RV Q YN+E + R + +
Sbjct: 549 LGIDATEL--VKKKEQKSEVANQIMNNTLFKEFSLRVKAKQETYNDELKTRYSAAGINEL 606
Query: 355 EHAAESKYLLEQIAKL 308
++A+ES++L++++ +L
Sbjct: 607 DYASESQFLIKKLDQL 622
>ref|XP_749761.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
gb|EAL87723.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
Length = 529
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
NM Y AC + CNKKVTE + CE C K RYIM++ VSD TG+ W+S F+E
Sbjct: 388 NMCYPACLSEGCNKKVTELDPGQWRCESCDKTHPRPEYRYIMLINVSDHTGQLWLSCFDE 447
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRS 368
++++G SAD+L +R + G+ + +EA FR + +++R R V +
Sbjct: 448 VGKQLMGTSADQLMDLR-QNGEKAAGDIFQEANCRTWNFRCRAKLDHFGDQQRIRYQVST 506
Query: 367 EAPVEHAAESKYLLEQI 317
PV ++ E+ L+ I
Sbjct: 507 AKPVNYSEEASRLMALI 523
>emb|CAG08885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 631
Score = 81.6 bits (200), Expect = 3e-14
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 712 YRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAE 539
YRAC + CNKKV + F + CE C ++ R ++ ++D WV+ F E AE
Sbjct: 495 YRACPSSDCNKKVIDQFNGWFRCEKCNQDFPNFEYRLLLSANLADFGDNQWVTCFQETAE 554
Query: 538 KIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 359
++G SA+ L R+R + + ++ ++A + ++F++ V YN+E R + TV P
Sbjct: 555 VLLGHSAETLGRLR-DTDEAAFDAVFQKANFTSYIFKIRVKLETYNDESRVKATVMEVQP 613
Query: 358 VEHAAESKYLLEQIAKL 308
++H S+ LL I KL
Sbjct: 614 LDHREYSRRLLGNIRKL 630
>emb|CAD21282.1| probable single-stranded DNA-binding protein 68k chain [Neurospora
crassa]
ref|XP_961333.1| hypothetical protein [Neurospora crassa N150]
ref|XP_322908.1| hypothetical protein [Neurospora crassa]
gb|EAA32097.1| hypothetical protein [Neurospora crassa]
Length = 610
Score = 80.5 bits (197), Expect = 6e-14
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
N Y C++ CN+KVT+ G G W CE CQ N RYIM V V+D TG+ W+S F+
Sbjct: 467 NFAYPGCRSEGCNRKVTD-MGDGTWRCEKCQINHDRPQYRYIMSVNVNDHTGQLWLSCFD 525
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
+ A I+G SADEL IR E + + ++A FR + ++R R V
Sbjct: 526 DTARVIMGKSADELMEIR-ETDETRLPAEFEQANCRKLNFRCRAKMDTFGEQQRIRYQVM 584
Query: 370 SEAPVEHAAESKYLLEQI 317
S AP+++ E L E I
Sbjct: 585 SVAPLDYKMEGNKLNELI 602
>gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [Saccharomyces
cerevisiae]
emb|CAA42420.1| replication factor-A protein 1 [Saccharomyces cerevisiae]
ref|NP_009404.1| Subunit of heterotrimeric Replication Factor A (RF-A), which is a
highly conserved single-stranded DNA binding protein
involved in DNA replication, repair, and recombination;
Rfa1p [Saccharomyces cerevisiae]
gb|AAB27889.1| BUF2 [Saccharomyces cerevisiae]
sp|P22336|RFA1_YEAST Replication factor-A protein 1 (RF-A) (Single-stranded DNA-binding
protein) (DNA binding protein BUF2) (Replication protein
A 69 kDa DNA-binding subunit)
gb|AAA34994.1| single stranded DNA binding protein
Length = 621
Score = 80.1 bits (196), Expect = 8e-14
Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Frame = -1
Query: 736 LKPDQNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
LK D N Y AC + CNKKV E + CE C N++ + RYI+ + + D T + W+
Sbjct: 476 LKVD-NFAYPACSNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWL 534
Query: 562 SVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQR 383
++F++ A++++G A+ L + KEE + + + + FR+ + YN++ R R
Sbjct: 535 TLFDDQAKQLLGVDANTLMSL-KEEDPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIR 593
Query: 382 ITVRSEAPVEHAAESKYLLEQIAK 311
TV + + + AE+ YL ++++K
Sbjct: 594 YTVANLHSLNYRAEADYLADELSK 617
>emb|CAA94241.1| replication protein A [Drosophila melanogaster]
ref|NP_524274.1| Replication Protein A 70 CG9633-PA [Drosophila melanogaster]
gb|AAL39476.1| LD04815p [Drosophila melanogaster]
gb|AAF54206.1| CG9633-PA [Drosophila melanogaster]
sp|Q24492|RFA1_DROME Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (DmRPA1)
Length = 603
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = -1
Query: 724 QNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N +YRAC CNKKV + + CE C R ++ + + D T WVS FN
Sbjct: 457 ENAFYRACPQSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFN 516
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEA-TWVPHLFRVSVTQHEYNNEKRQRITV 374
E E+++G ++ E+ E D + A ++ A + H+F++ Y + R ++TV
Sbjct: 517 EVGEQLLGHTSQEVGEAL--ENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTV 574
Query: 373 RSEAPVEHAAESKYLLEQIAKLT 305
+S AP+ H +K+LL+++ +LT
Sbjct: 575 QSVAPINHKEYNKHLLKELQELT 597
>emb|CAA22533.1| ssb1 [Schizosaccharomyces pombe]
ref|NP_595092.1| replication factor-a protein 1 [Schizosaccharomyces pombe 972h-]
gb|AAC49694.1| Rpa1 [Schizosaccharomyces pombe]
gb|AAC49437.1| single-stranded DNA binding protein p68 subunit
sp|Q92372|RFA1_SCHPO Replication factor-A protein 1 (Single-stranded DNA-binding protein
p68 subunit)
Length = 609
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N+ Y AC CNKKV + GS + CE C K RYI+ + V D TG+ W++VF+
Sbjct: 470 KNVSYPACPAADCNKKVFDQGGS-WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFD 528
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
+ + I+ +ADEL+ + +E ++++ + EA ++P++F+ Q + E R R TV
Sbjct: 529 DVGKLIMHKTADELNDL-QENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVM 587
Query: 370 SEAPVEHAAESKYLLEQI 317
S ++ ESK L+ I
Sbjct: 588 SINQMDWKEESKRLINFI 605
>emb|CAG59321.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_446394.1| unnamed protein product [Candida glabrata]
Length = 627
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = -1
Query: 721 NMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
N Y AC + CNKKV E + CE C N+ RYI+ + + D TG W+++F++
Sbjct: 486 NFAYPACSNENCNKKVIEQPDGTWRCEKCDINNPSPRWRYILTISIIDETGNLWLTLFDD 545
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRS 368
A++++G A+ L + KE D + + + FR+ + YN++ R R TV +
Sbjct: 546 QAKQLLGVDANTLMSL-KENDPDEFTRTTQNVQMNQYDFRIRAREDNYNDQTRIRYTVAN 604
Query: 367 EAPVEHAAESKYLLEQIAKL 308
+ AE+ YL +++ K+
Sbjct: 605 LHKLNFKAEADYLADELTKV 624
>ref|NP_001016043.1| replication protein A1, 70kDa [Xenopus tropicalis]
ref|NP_001015732.1| MGC107891 protein [Xenopus tropicalis]
gb|AAH89665.1| MGC107891 protein [Xenopus tropicalis]
sp|Q5FW17|RFA1_XENTR Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
emb|CAJ81527.1| replication protein A1 [Xenopus tropicalis]
Length = 609
Score = 78.6 bits (192), Expect = 2e-13
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKKV + + CE C K R I+ ++D W++ F
Sbjct: 465 ENCLYQACPSQDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGENQWITCFQ 524
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + KE+ + +Y + A + + FR+ V YN+E R + T
Sbjct: 525 ESAESILGQNATYLGEL-KEKNEQAYDEVFQNANFRSYTFRIRVKLETYNDESRIKATAM 583
Query: 370 SEAPVEHAAESKYLLEQIAKLTA 302
PV+H S+ L+ I K+ A
Sbjct: 584 DVKPVDHKEYSRRLIMNIRKMAA 606
>emb|CAG08929.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 77.8 bits (190), Expect = 4e-13
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKKV + + CE C K R I+ ++D WV+ F
Sbjct: 53 ENCLYQACPSQDCNKKVVDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQ 112
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L ++ KE + ++ ++A + +FR V YN+E R + TV
Sbjct: 113 ESAEAILGQNAAYLGQL-KESNEAAFNEVFQQANFNSFIFRSRVKLETYNDESRIKATVM 171
Query: 370 SEAPVEHAAESKYLLEQIAKL 308
PV+H SK L+ I KL
Sbjct: 172 EVKPVDHKDYSKRLIMNIRKL 192
>ref|NP_567576.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
Length = 461
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Frame = -1
Query: 721 NMWYRAC------KTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
N Y AC + C+KKVT+ G G W CE C K+ EC RYI+ +++ D T V
Sbjct: 203 NFCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCV 261
Query: 562 SVFNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQ 386
+ F E E+I+G SA +L ++ E D + + +++ + + F++ V + +++E+R
Sbjct: 262 TAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRV 321
Query: 385 RITVRSEAPVEHAAESKYLLEQIAKL 308
+ TV + ++A+++ +L + KL
Sbjct: 322 KATVVKVDKLNYSADTRTMLGAMDKL 347
>emb|CAB78915.1| replication A protein-like [Arabidopsis thaliana]
emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana]
Length = 717
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Frame = -1
Query: 721 NMWYRAC------KTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
N Y AC + C+KKVT+ G G W CE C K+ EC RYI+ +++ D T V
Sbjct: 459 NFCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCV 517
Query: 562 SVFNEHAEKIIGCSADELDRIRKEEGD-DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQ 386
+ F E E+I+G SA +L ++ E D + + +++ + + F++ V + +++E+R
Sbjct: 518 TAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRV 577
Query: 385 RITVRSEAPVEHAAESKYLLEQIAKL 308
+ TV + ++A+++ +L + KL
Sbjct: 578 KATVVKVDKLNYSADTRTMLGAMDKL 603
>ref|XP_650233.1| replication factor A protein 1 [Entamoeba histolytica HM-1:IMSS]
gb|EAL44846.1| replication factor A protein 1, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 588
Score = 77.0 bits (188), Expect = 7e-13
Identities = 46/142 (32%), Positives = 75/142 (52%)
Frame = -1
Query: 733 KPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVF 554
K D Y +C C KK+ E GS + CE CQK D + R+I+ ++D T WV++F
Sbjct: 437 KVDNGFCYLSCPDCKKKIVE--GSTF-CEKCQK-DIQPMRRFIVRASIADSTSSIWVTIF 492
Query: 553 NEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITV 374
+E +KIIG SADE+ I E+ + + K+ T++ F + + EYN E R R TV
Sbjct: 493 DEEMKKIIGKSADEMYEI-NEQDSELFENLFKQLTFIECRFHLICKKDEYNGETRTRFTV 551
Query: 373 RSEAPVEHAAESKYLLEQIAKL 308
+++ A ++ + ++
Sbjct: 552 NFIQVLDNIASGTEEMKSLERM 573
>gb|AAB63407.1| Hypothetical protein F18A1.5 [Caenorhabditis elegans]
ref|NP_495606.1| F18A1.5 [Caenorhabditis elegans]
sp|Q19537|RFA1_CAEEL Probable replication factor A 73 kDa subunit (RP-A) (RF-A)
(Replication factor-A protein 1)
Length = 655
Score = 77.0 bits (188), Expect = 7e-13
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
N YR C + C KK+ G Y CE C KN ++ Y+M ++SD TG+ +V+ F +
Sbjct: 512 NALYRGCASEGCQKKLVGENGD-YRCEKCNKNMNKFKWLYMMQFELSDETGQVYVTAFGD 570
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRS 368
A KI+G SA EL + +E D Y + +VP ++R+ YN E RQ++TV
Sbjct: 571 SAAKIVGKSAAELGELH-DESPDEYNAIFERLQFVPKMWRLRCKMDSYNEEVRQKMTVYG 629
Query: 367 EAPV---EHAAESKYLLEQIAKLT 305
V ++ K ++EQ+ +++
Sbjct: 630 VDDVNQDKYIENLKQMIEQMQQMS 653
>emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae]
emb|CAA10310.1| F18A1.5 protein [Caenorhabditis briggsae]
emb|CAE67510.1| Hypothetical protein CBG13026 [Caenorhabditis briggsae]
Length = 658
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = -1
Query: 712 YRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAE 539
Y+ C + C KKV E+ G Y CE C K+ ++ Y+M ++SD TG+ +V+ F + A
Sbjct: 515 YKGCASEGCQKKVIESDGE-YRCEKCNKSMNKFKWLYMMQFELSDETGQVYVTAFGDSAA 573
Query: 538 KIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 359
K++G +A E+ + K+E + Y + +VP ++R+ YN E RQ++TV S
Sbjct: 574 KVVGKTAQEVGDL-KDENLNEYNATFERLQFVPKMWRLRCKMETYNEEVRQKMTVFS--- 629
Query: 358 VEHAAESKYL 329
VE + KY+
Sbjct: 630 VEEVNQDKYI 639
>gb|AAT68105.1| replication protein A 70kd subunit [Danio rerio]
gb|AAH66711.1| Wu:fi14b08 protein [Danio rerio]
sp|Q6NY74|RFA1_BRARE Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 601
Score = 75.5 bits (184), Expect = 2e-12
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 724 QNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC K CNKKV + + CE C K + R ++ ++D WV+ F
Sbjct: 459 ENCLYQACPSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQ 518
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
+ AE ++G ++ L ++ K+ + ++ + A + +FR V YN+E R ++TV
Sbjct: 519 DTAETLLGQNSSYLGQL-KDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVV 577
Query: 370 SEAPVEHAAESKYLLEQIAKLTA 302
PV+H SK L+ I KL A
Sbjct: 578 DAKPVDHREYSKRLIINIRKLAA 600
>ref|XP_702119.1| PREDICTED: hypothetical protein XP_697027 [Danio rerio]
Length = 558
Score = 75.5 bits (184), Expect = 2e-12
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 724 QNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC K CNKKV + + CE C K + R ++ ++D WV+ F
Sbjct: 416 ENCLYQACPSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQ 475
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
+ AE ++G ++ L ++ K+ + ++ + A + +FR V YN+E R ++TV
Sbjct: 476 DTAETLLGQNSSYLGQL-KDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVV 534
Query: 370 SEAPVEHAAESKYLLEQIAKLTA 302
PV+H SK L+ I KL A
Sbjct: 535 DAKPVDHREYSKRLIINIRKLAA 557
>emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis]
sp|Q01588|RFA1_XENLA Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (p70)
Length = 609
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKKV + + CE C K R I+ ++D W++ F
Sbjct: 465 ENCLYQACPSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQ 524
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + KE+ + +Y + A + + FR V YN+E R + T
Sbjct: 525 ESAESILGQNATYLGEL-KEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAV 583
Query: 370 SEAPVEHAAESKYLLEQIAKL 308
PV+H S+ L+ I K+
Sbjct: 584 DVKPVDHKEYSRRLIMNIRKM 604
>gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895]
ref|NP_985540.1| AFL008Wp [Eremothecium gossypii]
Length = 694
Score = 75.1 bits (183), Expect = 3e-12
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Frame = -1
Query: 736 LKPDQNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
LK D N Y AC T C KKV E + CE CQ + RY++ + D T + W+
Sbjct: 549 LKVD-NFAYPACSTEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILDETSQIWI 607
Query: 562 SVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQR 383
++FN+ AEK++ A+ L + K + + + + FRV + YN E R R
Sbjct: 608 TLFNDQAEKLLSMDANTLTEL-KNTDPEKFQKVTQSVQMNEYDFRVRAREDTYNEETRIR 666
Query: 382 ITVRSEAPVEHAAESKYLLEQIAK 311
TV + P+ E+ YL ++ K
Sbjct: 667 YTVTNLYPLRWKVEADYLAGELTK 690
>gb|AAH70559.1| LOC397937 protein [Xenopus laevis]
Length = 607
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKKV + + CE C K R I+ ++D W++ F
Sbjct: 463 ENCLYQACPSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQ 522
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + KE+ + +Y + A + + FR V YN+E R + T
Sbjct: 523 ESAESILGQNATYLGEL-KEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAV 581
Query: 370 SEAPVEHAAESKYLLEQIAKL 308
PV+H S+ L+ I K+
Sbjct: 582 DVKPVDHKEYSRRLIMNIRKM 602
>dbj|BAD69789.1| Replication protein A large subunit [Bombyx mori]
Length = 598
Score = 74.3 bits (181), Expect = 4e-12
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = -1
Query: 724 QNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKK+ + + CE C + R ++ VSDPTG+ V++FN
Sbjct: 454 ENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFN 513
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE ++G SA+E+ R+ E + Y E + +F+ +N+E R + TV
Sbjct: 514 EAAETMLGKSAEEIARL-SEYDKNEYNKIFDEVKFKTFVFKFRTKMENFNDESRLKTTVV 572
Query: 370 SEAPVEHAAESKYLLEQIAKLT 305
+ PV++ LL+ I T
Sbjct: 573 NVQPVDYKDGIARLLKNIKTAT 594
>ref|XP_786722.1| PREDICTED: similar to replication protein A1 [Strongylocentrotus
purpuratus]
Length = 305
Score = 73.9 bits (180), Expect = 6e-12
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y AC + CNKKV+E Y CE C K+ R ++ V+D T W + F
Sbjct: 160 ENCMYMACPSAECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQ 219
Query: 550 EHAEKIIGCSADELDRIRK--EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
E AE+++ SA EL ++ E + + ++A ++ ++FR+ + YN E R + T
Sbjct: 220 ETAEQLLLKSAQELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCT 279
Query: 376 VRSEAPVEHAAESKYLLEQI 317
S P+ + L++ I
Sbjct: 280 CVSAQPINVRDYTNKLIKDI 299
>ref|XP_792076.1| PREDICTED: similar to replication protein A1 [Strongylocentrotus
purpuratus]
Length = 249
Score = 73.9 bits (180), Expect = 6e-12
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y AC + CNKKV+E Y CE C K+ R ++ V+D T W + F
Sbjct: 104 ENCMYMACPSAECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQ 163
Query: 550 EHAEKIIGCSADELDRIRK--EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
E AE+++ SA EL ++ E + + ++A ++ ++FR+ + YN E R + T
Sbjct: 164 ETAEQLLLKSAQELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCT 223
Query: 376 VRSEAPVEHAAESKYLLEQI 317
S P+ + L++ I
Sbjct: 224 CVSAQPINVRDYTNKLIKDI 243
>gb|EAL27901.1| GA21928-PA [Drosophila pseudoobscura]
Length = 590
Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N +YRAC CNKKV + Y CE C R ++ + V D T WV+ FN
Sbjct: 444 ENAFYRACPQADCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRWVTCFN 503
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEA-TWVPHLFRVSVTQHEYNNEKRQRITV 374
E E+++ ++ E+ E D + A ++ A + H+F++ Y + R ++TV
Sbjct: 504 ETGEQLLKHTSQEIGEAL--ENDPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTRNKLTV 561
Query: 373 RSEAPVEHAAESKYLLEQIAKLT 305
+S P+ H +++LL+++ +LT
Sbjct: 562 QSVGPLNHKEYNRHLLKELKELT 584
>pdb|1L1O|F Chain F, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
pdb|1L1O|C Chain C, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 181
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 39 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQ 98
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R + TV
Sbjct: 99 ESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVM 157
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 158 DVKPVDYREYGRRLVMSIRR 177
>dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo sapiens]
Length = 630
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 488 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQ 547
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R + TV
Sbjct: 548 ESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVM 606
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 607 DVKPVDYREYGRRLVMSIRR 626
>gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]
ref|NP_002936.1| replication protein A1, 70kDa [Homo sapiens]
gb|AAH18126.1| Replication protein A1, 70kDa [Homo sapiens]
sp|P27694|RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (p70)
gb|AAA36584.1| replication protein A, 70-kDa subunit
Length = 616
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 474 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQ 533
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R + TV
Sbjct: 534 ESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVM 592
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 593 DVKPVDYREYGRRLVMSIRR 612
>emb|CAH92206.1| hypothetical protein [Pongo pygmaeus]
sp|Q5R7Q4|RFA1_PONPY Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 616
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 474 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQ 533
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R + TV
Sbjct: 534 ESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVM 592
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 593 DVKPVDYREYGRRLVMSIRR 612
>ref|XP_548316.2| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 1 [Canis
familiaris]
Length = 616
Score = 72.8 bits (177), Expect = 1e-11
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 474 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQ 533
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE IIG + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 534 ESAEAIIGQNTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 592
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 593 DVKPVDYREYGRRLIMNIRR 612
>ref|XP_868487.1| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 2 [Canis
familiaris]
Length = 614
Score = 72.8 bits (177), Expect = 1e-11
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 472 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQ 531
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE IIG + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 532 ESAEAIIGQNTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 590
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 591 DVKPVDYREYGRRLIMNIRR 610
>ref|XP_868491.1| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 3 [Canis
familiaris]
Length = 611
Score = 72.8 bits (177), Expect = 1e-11
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 469 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQ 528
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE IIG + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 529 ESAEAIIGQNTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 587
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 588 DVKPVDYREYGRRLIMNIRR 607
>ref|XP_581025.2| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) [Bos taurus]
Length = 599
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 457 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQ 516
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G S L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 517 ESAEAILGQSTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVV 575
Query: 370 SEAPVEHAAESKYLLEQIAKLTA 302
PV++ + L+ I + A
Sbjct: 576 DVKPVDYREYGRRLVMNIRRNAA 598
>emb|CAG32101.1| hypothetical protein [Gallus gallus]
ref|NP_001006221.1| replication protein A1, 70kDa [Gallus gallus]
sp|Q5ZJJ2|RFA1_CHICK Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 614
Score = 72.0 bits (175), Expect = 2e-11
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC + CNKKV + Y CE C + R +++V ++D WV+ F
Sbjct: 471 ENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQ 530
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G SA L + K++ + ++ + A + + F++ V YN+E R + T
Sbjct: 531 ESAEFILGQSATFLGEL-KDKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATAL 589
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV + SK L+ I +
Sbjct: 590 DVKPVNYREYSKRLIASIRR 609
>gb|AAP92635.1| Cb1-727 [Rattus norvegicus]
ref|XP_213389.3| PREDICTED: similar to Cb1-727 [Rattus norvegicus]
Length = 680
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C + R I+ V ++D WV+ F
Sbjct: 532 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQ 591
Query: 550 EHAEKIIGCSADELDRIRKEEG-------DDSYALKLKEATWVPHLFRVSVTQHEYNNEK 392
E AE I+G + L ++++ G + ++ + A + FR+ V YN+E
Sbjct: 592 ESAEAILGQNTVYLGELKEKVGCVFVSMNEQAFEEVFQNANFRSFTFRIRVKLETYNDES 651
Query: 391 RQRITVRSEAPVEHAAESKYLLEQIAK 311
R + TV PV++ SK L+ I K
Sbjct: 652 RIKATVIDVKPVDYRDYSKRLIMNIRK 678
>dbj|BAE02429.1| unnamed protein product [Macaca fascicularis]
Length = 268
Score = 71.2 bits (173), Expect = 4e-11
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C R I+ V ++D WV+ F
Sbjct: 126 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQ 185
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R + +V
Sbjct: 186 ESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKASVM 244
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV++ + L+ I +
Sbjct: 245 DVKPVDYREYGRRLVLSIRR 264
>dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae]
Length = 605
Score = 71.2 bits (173), Expect = 4e-11
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = -1
Query: 718 MWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEH 545
M Y AC + CNKKVTE + CE C K RYIM++ VSD TG+ ++S F+E
Sbjct: 465 MCYPACLSEGCNKKVTELDPGQWRCERCDKTHPRPEYRYIMLISVSDHTGQLYLSCFDEV 524
Query: 544 AEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSE 365
++G SAD+L IR+ + D + ++A FR + +++R R + +
Sbjct: 525 GRYMMGTSADQLMEIRQND-DKAAGDIFQDANCRTWNFRCRAKIDNFGDQQRIRCQIVTA 583
Query: 364 APVEHAAESKYLLEQI 317
PV ++ E+ L I
Sbjct: 584 KPVNYSEEALRLANMI 599
>gb|AAU44205.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 951
Score = 71.2 bits (173), Expect = 4e-11
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Frame = -1
Query: 724 QNMWYRAC-------KTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEA 569
++ Y AC + CNKK G G W C+ C ++ RY++ ++ D TG
Sbjct: 605 ESFCYPACPKLLPVGRQCNKKAINN-GDGMWHCDRCDESFQNPEYRYMLRFQIQDHTGST 663
Query: 568 WVSVFNEHAEKIIGCSADELDRIRKEEGDDS-YALKLKEATWVPHLFRVSVTQHEYNNEK 392
+ S F+E E+I G A EL IR + DD+ +A ++ W +LF++ V + YN+E+
Sbjct: 664 YASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETYNDEQ 723
Query: 391 RQRITVRSEAPVEHAAESKYLLEQIAKL 308
+ T ++ + ES LL I L
Sbjct: 724 SLKCTAVKVEKLDPSKESNVLLGAIDNL 751
>dbj|BAE39655.1| unnamed protein product [Mus musculus]
dbj|BAE41250.1| unnamed protein product [Mus musculus]
Length = 621
Score = 70.9 bits (172), Expect = 5e-11
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C + R I+ ++D WV+ F
Sbjct: 481 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQ 540
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 541 ESAEAILGQNTMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 599
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV+ + L+ I K
Sbjct: 600 DVKPVDFRDYGRRLIANIRK 619
>gb|AAH19119.1| Replication protein A1 [Mus musculus]
emb|CAI23976.1| replication protein A1 [Mus musculus]
dbj|BAE29849.1| unnamed protein product [Mus musculus]
dbj|BAE28302.1| unnamed protein product [Mus musculus]
dbj|BAE30530.1| unnamed protein product [Mus musculus]
dbj|BAE31755.1| unnamed protein product [Mus musculus]
dbj|BAE38134.1| unnamed protein product [Mus musculus]
dbj|BAE38476.1| unnamed protein product [Mus musculus]
sp|Q8VEE4|RFA1_MOUSE Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
ref|NP_080929.1| replication protein A1 [Mus musculus]
Length = 623
Score = 70.9 bits (172), Expect = 5e-11
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C + R I+ ++D WV+ F
Sbjct: 483 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQ 542
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 543 ESAEAILGQNTMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 601
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV+ + L+ I K
Sbjct: 602 DVKPVDFRDYGRRLIANIRK 621
>dbj|BAE31105.1| unnamed protein product [Mus musculus]
Length = 644
Score = 70.9 bits (172), Expect = 5e-11
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y+AC T CNKKV + Y CE C + R I+ ++D WV+ F
Sbjct: 504 ENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQ 563
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
E AE I+G + L + KE+ + ++ + A + FR+ V YN+E R + TV
Sbjct: 564 ESAEAILGQNTMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVM 622
Query: 370 SEAPVEHAAESKYLLEQIAK 311
PV+ + L+ I K
Sbjct: 623 DVKPVDFRDYGRRLIANIRK 642
>ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
gb|EAA62003.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
Length = 606
Score = 70.5 bits (171), Expect = 6e-11
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
N+ Y AC + CNKKVTE + CE C K RYIM+V VSD TG+ +++ F++
Sbjct: 465 NLCYPACLSEGCNKKVTEVDPGQWRCERCDKTHPRAEYRYIMLVNVSDHTGQLYLNCFDD 524
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRS 368
++G SA++L + + +G + ++ AT F Y +++R R V
Sbjct: 525 VGRLLLGMSANQLMELPQNDG-KALGNVIQNATCRTWTFGCRAKIDHYGDQQRIRYQVSY 583
Query: 367 EAPVEHAAESKYLLEQI 317
PV ++ E+ L + I
Sbjct: 584 AKPVNYSEEASRLADII 600
>ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
gb|EAA67349.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
Length = 607
Score = 70.1 bits (170), Expect = 8e-11
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = -1
Query: 724 QNMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y AC + CNKKVT+ + CE C + + RY++ + V+D T W++ F+
Sbjct: 463 ENFCYAACLSQGCNKKVTQMPDGTWQCEKCNLSHEKPEYRYVLSLNVADHTSHQWLTGFD 522
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
+ +++G +ADE+ + KE D +EA FR + +R R V
Sbjct: 523 DFGRQVMGRTADEMMEL-KENDDTKLTAAFEEANCKKFTFRCRAKMDNFGEAQRIRYQVM 581
Query: 370 SEAPVEHAAESKYLLEQI 317
S P++ +E L E I
Sbjct: 582 SVTPLDFKSEGTKLAELI 599
>gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = -1
Query: 724 QNMWYRAC--KTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFN 551
+N Y AC + C+KKVT + + CE C RYIM VSD TG WVS F+
Sbjct: 474 ENFAYPACISENCSKKVTPSMDDKWRCERCNITHDRAQYRYIMSADVSDHTGHTWVSCFD 533
Query: 550 EHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKR 389
+ A I+G SADE+ ++ E D S A + A +FR Y ++ +
Sbjct: 534 DSARIIMGKSADEMMELKNRE-DGSCAEAFEAANCRKMVFRCRAKMDTYGDQPK 586
>emb|CAG84575.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_456619.1| hypothetical protein DEHA0A06875g [Debaryomyces hansenii CBS767]
Length = 620
Score = 67.8 bits (164), Expect = 4e-10
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Frame = -1
Query: 724 QNMWYRACK------------TCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDP 581
+N Y AC TCN+KV E + CE C N +E RYI+ V D
Sbjct: 465 ENFCYPACNNSLQSSSQQPSTTCNRKVVEQPDGTWRCEKCDINFNEPHYRYILNCSVMDS 524
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDS---YALKLKEATWVPHLFRVSVTQH 410
+G+ W+++F++ A K+ G +A EL +R+++ ++ + + + T FR+ Q
Sbjct: 525 SGQLWMTLFDQEANKLFGKTAGELLTLREQQTNNENNVFQDLINDITMKEFNFRLKARQD 584
Query: 409 EYNNEKRQRITVRSEAPVEHAAESKYLLEQI 317
YN R R + V+ AE ++L ++
Sbjct: 585 SYNGVVRVRYQAMTINDVDFNAECEHLCSEL 615
>ref|XP_765009.1| replication factor A protein [Theileria parva strain Muguga]
gb|EAN32726.1| replication factor A protein, putative [Theileria parva]
Length = 466
Score = 67.0 bits (162), Expect = 7e-10
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
+ +WY AC TC KKV E + + C C + LRYI+ D +G+ + +V++E
Sbjct: 302 EMRLWYHACPTCLKKVVEEQENVWRCITCDDSIVTPVLRYIVSCVFVDFSGQLFSTVYSE 361
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVS--VTQHEYNNEKRQRITV 374
+K++G S ELD + KEE ++ + F+VS YN E R V
Sbjct: 362 SGKKLLGYSEQELDAMDKEELKNTLDFDVLHKD-----FKVSGFFKNKTYNGESRNTFNV 416
Query: 373 RSEAPVEHAAESKYLLEQI 317
+ V++A E++ LLE++
Sbjct: 417 TNIEEVDYAKEAESLLERM 435
>gb|AAR84278.1| putative replication protein A subunit 1 [Leishmania amazonensis]
Length = 467
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSG--YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
WY AC TCNKKVTE G + CE C K + RY++ ++V+D +AW+++FNE
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAG 367
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATW-VPHLFRVSVTQHEYNN 398
+ G A EL R +E D Y KL + P + R+ V + +N
Sbjct: 368 IEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMRLRVKEETSSN 414
>gb|AAK84867.1| replication protein A subunit 1 [Leishmania infantum]
Length = 467
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSG--YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
WY AC TCNKKVTE G + CE C K + RY++ ++V+D +AW+++FNE
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAG 367
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATW-VPHLFRVSVTQHEYNN 398
+ G A EL R +E D Y KL + P + R+ V + +N
Sbjct: 368 IEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMRLRVKEETSSN 414
>emb|CAJ05550.1| replication factor A, 51kDa subunit, putative [Leishmania major]
Length = 467
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSG--YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
WY AC TCNKKVTE G + CE C K + RY++ ++V+D +AW+++FNE
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAG 367
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATW-VPHLFRVSVTQHEYNN 398
+ G A EL R +E D Y KL + P + R+ V + +N
Sbjct: 368 IEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMRLRVKEEMSSN 414
>emb|CAA80682.1| replication protein A 51 kilodalton subunit [Crithidia fasciculata]
sp|Q23696|RFA1_CRIFA Replication factor A 51 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 1) (Single-stranded DNA-binding protein
P51 subunit)
Length = 467
Score = 62.8 bits (151), Expect = 1e-08
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSG--YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
WY AC TCNKKVTE G + CE C RY++ ++V+D + W+++FNE
Sbjct: 309 WYDACPTCNKKVTEEGAQGDRFRCEKCDATVVPTQ-RYLVSIQVTDNVSQVWLTLFNEAG 367
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEA 452
+ G A EL R +E D Y KL +A
Sbjct: 368 VEFFGMEASELKRRAQE--DPLYIAKLAQA 395
>gb|EAA01767.2| ENSANGP00000015823 [Anopheles gambiae str. PEST]
ref|XP_321709.2| ENSANGP00000015823 [Anopheles gambiae str. PEST]
Length = 612
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Frame = -1
Query: 721 NMWYRACKT--CNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
N Y+AC CNKKV + + CE C R ++ + + D T WV+VF E
Sbjct: 468 NAVYKACPQADCNKKVIDQENGQFRCEKCNAEFPNFKYRLLVNMLIGDWTSNRWVTVFTE 527
Query: 547 HAEKIIGCSADELD---RIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
AE+++G S+ E+ +KEE + + ++ +F++ + + R + +
Sbjct: 528 LAEEMLGKSSQEIGSSLEYQKEEAEKLFT----SISFKSFVFKLRTKVEYFGEQPRNKTS 583
Query: 376 VRSEAPVEHAAESKYLLEQIAKLT 305
S APV H + L++ I +LT
Sbjct: 584 AVSVAPVNHKEYNALLIKSIQELT 607
>emb|CAI74544.1| replication factor A-related protein, putative [Theileria annulata]
ref|XP_952276.1| hypothetical protein TA13200 [Theileria annulata strain Ankara]
Length = 466
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
D +WY +C C KKV E + + C C + LRYI+ D +G+ +V+++
Sbjct: 302 DMRLWYHSCPNCYKKVVEEQENVWRCITCDDSIVTPVLRYIVTCVFVDFSGQMVSTVYSD 361
Query: 547 HAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVS--VTQHEYNNEKRQRITV 374
+ +K++G + ELD + KE+ ++ + F+VS YN E R V
Sbjct: 362 NGKKLLGYTEQELDAMDKEQLKNTLDFDVLHRD-----FKVSGFFKNKTYNGESRNIFNV 416
Query: 373 RSEAPVEHAAESKYLLEQI 317
+ V++A E++ LLE++
Sbjct: 417 TNVEEVDYAKETELLLEKM 435
>ref|NP_189742.1| unknown protein [Arabidopsis thaliana]
Length = 450
Score = 60.5 bits (145), Expect = 7e-08
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSG----YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVS 560
D + +Y ACK CNKKVT+ + +WCE C+ + RY + VKV D +GE +
Sbjct: 234 DWSWYYIACKKCNKKVTKVVTTSLKAQFWCETCRAPVNNVLARYKLHVKVMDSSGEMKLM 293
Query: 559 VFNEHAEKIIGCSADEL 509
+F+ A +I+GC A+ L
Sbjct: 294 LFDAMASEIVGCPANNL 310
>ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma brucei TREU927]
gb|EAN79866.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei]
Length = 463
Score = 60.5 bits (145), Expect = 7e-08
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Frame = -1
Query: 766 VSLVCMPHKPLKPDQNMWYRACKTCNKKVT--ETFGSGYWCEGCQKNDSECSLRYIMVVK 593
+ L C+P LK D WY AC CNKKV G + CE C ++ RY++ ++
Sbjct: 293 IDLRCVPVY-LKQD-TQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQ-RYLVSIQ 349
Query: 592 VSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATW-VPHLFRVSVT 416
V+D + W+++FNE + G +A EL R++E D + K+ + P L R+ V
Sbjct: 350 VTDNVSQVWLTLFNESGAEFFGMTAPELK--RRQEEDPMFVTKVAQMRMNRPVLMRLRVK 407
Query: 415 QHEY-NNEKRQRI 380
+ NE +R+
Sbjct: 408 EEGLGGNEDSERV 420
>gb|EAR92088.1| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila
SB210]
Length = 713
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
D ++Y AC +C KK+ + C C K+ +E RYI+ + +SD T WVS F+E
Sbjct: 564 DTPLYYNACFSCKKKIARN-NEVWTCINCNKDFNEPDSRYILSLNISDSTDTIWVSAFDE 622
Query: 547 HAEKIIGCSADELDRIRK--EEGDDSYALKLKEATWVPHLFRVSVTQ-HEYNNEKRQRIT 377
+KI+G D + E G ++ L A + F + Q + N R +
Sbjct: 623 VGQKILGVKGDVFRYADEDTEHGTETKKKLLMAAQNKEYRFLLLTKQERDQNGNARDKTV 682
Query: 376 VRSEAPVEHAAESKYLLEQIAK 311
+ + + A E+K ++ + K
Sbjct: 683 IHAIKDFQPAYEAKKIINSLEK 704
>ref|XP_819019.1| replication factor A, 51kDa subunit [Trypanosoma cruzi strain CL
Brener]
gb|EAN97168.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 57.4 bits (137), Expect = 6e-07
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = -1
Query: 766 VSLVCMPHKPLKPDQNMWYRACKTCNKKVTETFGSG--YWCEGCQKNDSECSLRYIMVVK 593
+ + C+P LK D WY AC CNKKVT G Y CE C + RY++ ++
Sbjct: 292 IDVRCVPVY-LKQDAQ-WYDACPQCNKKVTLEGAQGERYRCEKCDRQVVPTQ-RYLVSIQ 348
Query: 592 VSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKE 455
SD + W+++FNE + G A EL +++E D + K+ +
Sbjct: 349 ASDNVSQKWLTLFNEAGVEFFGMPATELK--KQQEADPMFVTKIAQ 392
>ref|NP_178764.1| unknown protein [Arabidopsis thaliana]
gb|AAD32756.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 458
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTE----TFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVS 560
D + +Y CK CNKKVT+ + + WCE C+ + RY + VKV D +GE +
Sbjct: 266 DWSWYYIVCKKCNKKVTKVVMTSLKAQLWCETCRAPITNVLARYKLHVKVMDSSGEMKLM 325
Query: 559 VFNEHAEKIIGCSADEL 509
+F+ + +I+GC A+ L
Sbjct: 326 LFDAMSSEIVGCPANNL 342
>emb|CAI74881.1| replication factor-a protein 1, putative [Theileria annulata]
ref|XP_952613.1| replication factor-A protein 1 [Theileria annulata strain Ankara]
Length = 625
Score = 55.1 bits (131), Expect = 3e-06
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
D N + +C C KK++ G Y C C + + L YI+ +K+ D + W S +
Sbjct: 480 DTNFCFPSCTGCRKKMSNDQGCWY-CSKCNSSTNPIHL-YILNIKIVDESSHIWASAMAD 537
Query: 547 HAEKIIGCSADEL----DRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRI 380
E I+G A L +R E + S+ ++A ++F++ T + +E R +
Sbjct: 538 VGESIMGIKAYNLINLMERGPSNENEKSFINYFEDARLTEYIFKIKATVENFMDEPRIKY 597
Query: 379 TVRSEAPVEHAAE--SKYLLEQIAKL 308
V P++ + K +E I KL
Sbjct: 598 RVLKATPLDRELDLAIKDRIENIKKL 623
>ref|XP_764664.1| replication factor A protein [Theileria parva strain Muguga]
gb|EAN32381.1| replication factor A protein, putative [Theileria parva]
Length = 458
Score = 53.1 bits (126), Expect = 1e-05
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
D N + +C C KK+T G Y C C + + L YI+ +K+ D T W + ++
Sbjct: 329 DTNFCFPSCTGCRKKMTNDQGIWY-CPKCNSSTNPVHL-YILNIKIVDETSHIWATAMSD 386
Query: 547 HAEKIIGCSADELDRIRK----EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKR 389
E I+G A +L ++ + +E + ++ ++A ++F++ T + +E R
Sbjct: 387 VGESIMGIKAYKLIKLMENGPSDENEKNFVNYFEDARLTEYIFKIKATVENFMDEPR 443
>dbj|BAB11360.1| replication protein A1-like protein [Arabidopsis thaliana]
Length = 543
Score = 52.4 bits (124), Expect = 2e-05
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKK---VTETFGSG----------YWCEGCQKNDSECSLRYIMVVKVS 587
D +Y C CN+K V E+ +G +WC+ CQ++ + RY + V+V
Sbjct: 275 DWGWFYFGCPKCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVEARYKLHVRVM 334
Query: 586 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD 479
D T E + VF +A K+IG S++EL + EE D
Sbjct: 335 DQTAEIKLMVFENNATKLIGKSSEELVDGQYEEIKD 370
>ref|NP_198524.1| unknown protein [Arabidopsis thaliana]
Length = 566
Score = 52.0 bits (123), Expect = 2e-05
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Frame = -1
Query: 727 DQNMWYRACKTCNKK---VTETFGSG----------YWCEGCQKNDSECSLRYIMVVKVS 587
D +Y C CN+K V E+ +G +WC+ CQ++ + RY + V+V
Sbjct: 300 DWGWFYFGCPKCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVEARYKLHVRVM 359
Query: 586 DPTGEAWVSVFNEHAEKIIGCSADEL 509
D T E + VF +A K+IG S++EL
Sbjct: 360 DQTAEIKLMVFENNATKLIGKSSEEL 385
>ref|NP_174826.1| unknown protein [Arabidopsis thaliana]
gb|AAG51090.1| hypothetical protein [Arabidopsis thaliana]
Length = 567
Score = 51.2 bits (121), Expect = 4e-05
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +CKTCNKKV +WC+ C + RY++ KV D
Sbjct: 285 DWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPRFWCDTCTSVVTNVVSRYMIYAKVMDS 344
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD 479
TGEA + +F+ +IIG SA + +E DD
Sbjct: 345 TGEAKLLLFDSICSEIIGESAASVFNGSVDEIDD 378
>ref|NP_175703.1| unknown protein [Arabidopsis thaliana]
gb|AAG52278.1| putative replication protein; 94555-97079 [Arabidopsis thaliana]
Length = 566
Score = 51.2 bits (121), Expect = 4e-05
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKV---TETFGSG-----YWCEGCQKNDSECSLRYIMVVKVSDPTGE 572
D + +Y A CNKKV +T SG Y C+ C + + RY + + + D TGE
Sbjct: 299 DYSWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIMDNTGE 358
Query: 571 AWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYAL 467
+ + +F+ E IIGC A EL + E+ D+ L
Sbjct: 359 SKLMLFDSFVEPIIGCPATELLDVTNEQIDEPQPL 393
>dbj|BAB02796.1| replication protein A1-like [Arabidopsis thaliana]
Length = 581
Score = 50.4 bits (119), Expect = 7e-05
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +C+ CNKKVT +WC+ C+ + RY++ KV D
Sbjct: 298 DWAWYYISCRACNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTNVIARYMIYAKVMDN 357
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYAL--KLKEATWVPHLFRVSV 419
TGE+ + +F++ +IIG +A + +E DD L LK LF VS+
Sbjct: 358 TGESKLLLFDQICTEIIGETAPSVLNGSVDEIDDPDDLPDALKNLYGKTFLFLVSI 413
>ref|NP_187935.1| unknown protein [Arabidopsis thaliana]
Length = 570
Score = 50.4 bits (119), Expect = 7e-05
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +C+ CNKKVT +WC+ C+ + RY++ KV D
Sbjct: 287 DWAWYYISCRACNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTNVIARYMIYAKVMDN 346
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYAL--KLKEATWVPHLFRVSV 419
TGE+ + +F++ +IIG +A + +E DD L LK LF VS+
Sbjct: 347 TGESKLLLFDQICTEIIGETAPSVLNGSVDEIDDPDDLPDALKNLYGKTFLFLVSI 402
>ref|XP_667409.1| replication protein A large subunit [Cryptosporidium hominis TU502]
gb|EAL37178.1| replication protein A large subunit [Cryptosporidium hominis]
Length = 473
Score = 47.8 bits (112), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = -1
Query: 721 NMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
++ Y AC C KKV F + Y CE C ++ +++ V + D T V F+E
Sbjct: 315 SLTYDACPICKKKVL--FSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCFHEIG 370
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLK-EATWVPHLFRVSVTQHEYNNEKRQRITVRSE 365
I + + ++ D L + W + ++ + EYNN+K+ R ++S
Sbjct: 371 STFIKELSASACKEMEQNNDKKLNFILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSA 430
Query: 364 APVEHAAESKYLLEQIAK 311
P++ S +LE I++
Sbjct: 431 EPIDLNQISYLMLESISQ 448
>gb|AAD42062.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 473
Score = 47.8 bits (112), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = -1
Query: 721 NMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
++ Y AC C KKV F + Y CE C ++ +++ V + D T V F+E
Sbjct: 315 SLTYDACPICKKKVL--FSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCFHEIG 370
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLK-EATWVPHLFRVSVTQHEYNNEKRQRITVRSE 365
I + + ++ D L + W + ++ + EYNN+K+ R ++S
Sbjct: 371 STFIKELSASACKEMEQNNDKKLNFILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSA 430
Query: 364 APVEHAAESKYLLEQIAK 311
P++ S +LE I++
Sbjct: 431 EPIDLNQISYLMLESISQ 448
>dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis
thaliana]
Length = 1073
Score = 47.8 bits (112), Expect = 4e-04
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +CKTCNKKV +WC+ C+ + RY++ KV D
Sbjct: 274 DWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWCDTCKSVVTNVVSRYMIYAKVMDS 333
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYN 401
T EA + +F+ +IIG SA + E +D L + F V + N
Sbjct: 334 TSEAKLVLFDSICFEIIGESATSVLNGSVNEIEDPEDLPDSVKNLIGKTFLFLVWVEKDN 393
Query: 400 NEKRQRITVRSEAPVEHAAESKYLLEQIAK 311
+ I S+ ++ K LLE A+
Sbjct: 394 ISDGKEIYKVSKVLLKDGLLEKQLLEDSAE 423
>ref|NP_198346.1| unknown protein [Arabidopsis thaliana]
Length = 1033
Score = 47.8 bits (112), Expect = 4e-04
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +CKTCNKKV +WC+ C+ + RY++ KV D
Sbjct: 274 DWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWCDTCKSVVTNVVSRYMIYAKVMDS 333
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYN 401
T EA + +F+ +IIG SA + E +D L + F V + N
Sbjct: 334 TSEAKLVLFDSICFEIIGESATSVLNGSVNEIEDPEDLPDSVKNLIGKTFLFLVWVEKDN 393
Query: 400 NEKRQRITVRSEAPVEHAAESKYLLEQIAK 311
+ I S+ ++ K LLE A+
Sbjct: 394 ISDGKEIYKVSKVLLKDGLLEKQLLEDSAE 423
>ref|XP_626789.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa
II]
gb|EAK89268.1| replication protein A1 large subunit [Cryptosporidium parvum]
Length = 484
Score = 47.8 bits (112), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = -1
Query: 721 NMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
++ Y AC C KKV F + Y CE C ++ +++ V + D T V F+E
Sbjct: 326 SLTYDACPICKKKVL--FSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCFHEIG 381
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLK-EATWVPHLFRVSVTQHEYNNEKRQRITVRSE 365
I + + ++ D L + W + ++ + EYNN+K+ R ++S
Sbjct: 382 STFIKELSASACKEMEQNNDKKLNFILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSA 441
Query: 364 APVEHAAESKYLLEQIAK 311
P++ S +LE I++
Sbjct: 442 EPIDLNQISYLMLESISQ 459
>ref|XP_739325.1| replication factor a protein [Plasmodium chabaudi chabaudi]
emb|CAH77169.1| replication factor a protein, putative [Plasmodium chabaudi]
Length = 255
Score = 46.6 bits (109), Expect = 0.001
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Frame = -1
Query: 712 YRACKTCNKKVT------------ETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEA 569
Y AC CNKK+ E +C C KN+ Y + +K++D T
Sbjct: 98 YSACPNCNKKMVATVIEDGEQDMDENVSESMYCSKCNKNNIPV-YNYSINLKITDNTDSL 156
Query: 568 WVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYALKLKEATWVPHLFRVSVTQHEY 404
VS F A+ I+ G SA+E ++R+E E +++ L +++A FR+ +
Sbjct: 157 RVSAFANAAKTIMNGLSAEEFMKLRQEHISQENIENFDL-IEKAKLNEFFFRIKAYMTSH 215
Query: 403 NNEKRQRITVRSEAPVEH--AAESKYLLEQIAKLT 305
+E ++ T+ P+ +YL+++I T
Sbjct: 216 MDEIKKNYTILETIPLSKLLVDNCRYLIKEIKLAT 250
>ref|XP_724343.1| replication A protein [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA15908.1| putative replication A protein [Plasmodium yoelii yoelii]
Length = 1168
Score = 46.2 bits (108), Expect = 0.001
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Frame = -1
Query: 712 YRACKTCNKKVTET------------FGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEA 569
Y AC CNKK+ T +C C KN+ Y + +K++D T
Sbjct: 1011 YSACPNCNKKMVATVIEDGEQDMDQNVSESMYCAKCNKNNIPV-YNYSINLKITDNTDSL 1069
Query: 568 WVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYALKLKEATWVPHLFRVSVTQHEY 404
VS F A+ I+ G SA+E ++R+E E +++ L +++A FR+ +
Sbjct: 1070 RVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDL-IEKAKLNEFFFRIKAYMTSH 1128
Query: 403 NNEKRQRITVRSEAPVEH--AAESKYLLEQIAKLT 305
+E ++ T+ P+ +YL+++I T
Sbjct: 1129 MDEIKKNYTILETIPLSKLLVDNCRYLIKEIKLAT 1163
>ref|XP_680439.1| replication factor a protein [Plasmodium berghei strain ANKA]
emb|CAI04746.1| replication factor a protein, putative [Plasmodium berghei]
Length = 1169
Score = 46.2 bits (108), Expect = 0.001
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Frame = -1
Query: 712 YRACKTCNKKVTET------------FGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEA 569
Y AC CNKK+ T +C C KN+ Y + +K++D T
Sbjct: 1012 YSACPNCNKKMVATVIEDGEEDMDQNVSESMYCAKCNKNNIPV-YNYSINLKITDNTDSL 1070
Query: 568 WVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYALKLKEATWVPHLFRVSVTQHEY 404
VS F A+ I+ G SA+E ++R+E E +++ L +++A FR+ +
Sbjct: 1071 RVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDL-IEKAKLNEFFFRIKAYMTSH 1129
Query: 403 NNEKRQRITVRSEAPVEH--AAESKYLLEQIAKLT 305
+E ++ T+ P+ +YL+++I T
Sbjct: 1130 MDEIKKNYTILETIPLSKLLVDSCRYLIKEIKLAT 1164
>ref|NP_568511.1| unknown protein [Arabidopsis thaliana]
Length = 485
Score = 46.2 bits (108), Expect = 0.001
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Frame = -1
Query: 760 LVCMPHKPLKPDQNMWYRACKTCNKKVT-----------ETFGSGYWCEGCQKNDSECSL 614
++C H ++ D +Y ACK C+KKV + + YWC C N ++
Sbjct: 247 VMCKIHT-IEGDFGWFYVACKKCSKKVEMNNKDKTAIADKPTKTTYWCPKCNLNITQVVP 305
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSA-DELDRIRKEEGDDSYALKLK 458
R+ + V V D TG+ +F+ A K+IG SA D LD + ++ + +K
Sbjct: 306 RFKLHVGVIDQTGDIKCIMFDSAASKMIGHSAFDLLDGVYDDDDPERMPPSIK 358
>ref|XP_511254.1| PREDICTED: replication protein A1, 70kDa [Pan troglodytes]
Length = 462
Score = 45.8 bits (107), Expect = 0.002
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = -1
Query: 568 WVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKR 389
WV+ F E AE I+G +A L + K++ + ++ + A + +FRV V YN+E R
Sbjct: 374 WVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESR 432
Query: 388 QRITVRSEAPVEHAAESKYLLEQIAK 311
+ TV PV++ + L+ I +
Sbjct: 433 IKATVMDVKPVDYREYGRRLVMSIRR 458
>ref|NP_189797.1| unknown protein [Arabidopsis thaliana]
emb|CAB91582.1| putative protein [Arabidopsis thaliana]
Length = 448
Score = 44.3 bits (103), Expect = 0.005
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y +CKTCNKKV +WC+ C+ + RY++ V D
Sbjct: 222 DWAWYYISCKTCNKKVNHIHAGVHGVNNKGKKPRFWCDTCKTVVTNVIPRYMLYANVMDN 281
Query: 580 TGEAWVSVFNEHAEKIIGCSA 518
TGEA +F+ ++ G SA
Sbjct: 282 TGEAKFLLFDSICSELTGESA 302
>ref|NP_189826.1| unknown protein [Arabidopsis thaliana]
emb|CAB87732.1| putative replication protein [Arabidopsis thaliana]
Length = 409
Score = 44.3 bits (103), Expect = 0.005
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D + +Y +C+ CNKKVT +WC+ C+ + +Y++ VKV D
Sbjct: 191 DWSWYYFSCRNCNKKVTHIHAGVNTTSSKSSKPRFWCDVCKNAVTNVQAKYMLYVKVMDD 250
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL 509
+GE +F+ ++G S +
Sbjct: 251 SGETKFLLFDTICADMVGESCTSM 274
>gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza sativa (japonica
cultivar-group)]
Length = 764
Score = 43.9 bits (102), Expect = 0.006
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 724 QNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEH 545
+N WY +C C T + Y C C K RY++ +++SD T ++FNE
Sbjct: 279 RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEE 337
Query: 544 AEKIIG 527
AE+I G
Sbjct: 338 AERIFG 343
>gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa (japonica
cultivar-group)]
Length = 800
Score = 43.9 bits (102), Expect = 0.006
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 724 QNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEH 545
+N WY +C C T + Y C C K RY++ +++SD T ++FNE
Sbjct: 279 RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEE 337
Query: 544 AEKIIG 527
AE+I G
Sbjct: 338 AERIFG 343
>gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza sativa (japonica
cultivar-group)]
Length = 757
Score = 43.9 bits (102), Expect = 0.006
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 724 QNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEH 545
+N WY +C C T + Y C C K RY++ +++SD T ++FNE
Sbjct: 279 RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEE 337
Query: 544 AEKIIG 527
AE+I G
Sbjct: 338 AERIFG 343
>gb|AAV44036.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 820
Score = 43.9 bits (102), Expect = 0.006
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 724 QNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEH 545
+N WY +C C T + Y C C K RY++ +++SD T ++FNE
Sbjct: 279 RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEE 337
Query: 544 AEKIIG 527
AE+I G
Sbjct: 338 AERIFG 343
>ref|NP_178584.2| unknown protein [Arabidopsis thaliana]
Length = 572
Score = 43.1 bits (100), Expect = 0.011
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSG-------------YWCEGCQKNDSECSLRYIMVVKVS 587
D +Y C CN+K+ S +WC+ Q++ + RY + ++V
Sbjct: 300 DWGWFYFGCPKCNRKIELVKESTSTVKRIQAPTKPKFWCDKYQESITNVEARYKLHIRVM 359
Query: 586 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD 479
D TGE + VF +A +I S++EL + EE +D
Sbjct: 360 DQTGEIKLMVFENNATNLIRKSSEELLDGQYEEIED 395
>gb|AAM15454.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 521
Score = 43.1 bits (100), Expect = 0.011
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSG-------------YWCEGCQKNDSECSLRYIMVVKVS 587
D +Y C CN+K+ S +WC+ Q++ + RY + ++V
Sbjct: 249 DWGWFYFGCPKCNRKIELVKESTSTVKRIQAPTKPKFWCDKYQESITNVEARYKLHIRVM 308
Query: 586 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD 479
D TGE + VF +A +I S++EL + EE +D
Sbjct: 309 DQTGEIKLMVFENNATNLIRKSSEELLDGQYEEIED 344
>emb|CAB62873.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
ref|NP_702753.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
Length = 1145
Score = 42.7 bits (99), Expect = 0.014
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Frame = -1
Query: 712 YRACKTCNKKV-------------TETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGE 572
Y AC CNKK+ + +C C KN+ Y + +K++D T
Sbjct: 983 YSACPDCNKKMISNSVDDNEYEPSSNLLEETMYCAKCNKNNIPV-YNYYINLKITDSTDS 1041
Query: 571 AWVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYALKLKEATWVPHLFRVSVTQHE 407
S F A+ I+ G SA+E ++R+E E +++ + +++ FR+ V
Sbjct: 1042 IRASAFANCAKIIMNGLSAEEYMKLRQEYIMQENIENFDI-IEKIKLNEFFFRIKVYMTS 1100
Query: 406 YNNEKRQRITVRSEAPVEHAA--ESKYLLEQIAKLTA 302
+ +E ++ T+ APV +YL++ I LT+
Sbjct: 1101 HMDELKKNYTIIDIAPVGKLLIDNCRYLIKSIKNLTS 1137
>gb|EAS00303.1| hypothetical protein TTHERM_00218760 [Tetrahymena thermophila
SB210]
Length = 676
Score = 42.4 bits (98), Expect = 0.019
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Frame = -1
Query: 718 MWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAE 539
++Y C K V + G ++CE CQ+ + + ++ V D TG V +F++ +
Sbjct: 525 LYYYRCTCQGKSVLKYHGDSFFCESCQQFINP-QVHLMLRAFVQDSTGTIPVMIFDQQSS 583
Query: 538 KII-----GCSADELDRIRK---EEGDDSYALKL-KEATWVPHLFRVSVTQHEYNNEKRQ 386
++I E + K E G + +L + + +F + E+NNE+
Sbjct: 584 QLINQIDPSIHVQEAGQYVKNCIENGQEEIIRQLFSKLDFARFIFEIQFENKEFNNEQEI 643
Query: 385 RITVRSEAPVEHAAESKYLLEQIAKL 308
V ESKYLL+++ L
Sbjct: 644 AYKVLKIEKENIKEESKYLLKKLEHL 669
>ref|XP_476960.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC83855.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 544
Score = 42.4 bits (98), Expect = 0.019
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
K + WY+AC C K V T G+ C C + + Y + V + D T A +
Sbjct: 299 KEIDVSSGWWYKACSICRKGVKPTL-QGFECVNCDNTEPIITPSYKLNVVIEDNTDRAKI 357
Query: 562 SVFNEHAEKIIGCSADEL 509
+F AE+++ +A +L
Sbjct: 358 FMFGGMAEQVVRRTAADL 375
>gb|AAW71479.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 688
Score = 42.0 bits (97), Expect = 0.024
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTE----------------------TFGSGYWCEGCQKNDSECSL 614
D ++ +C C +KVTE + G Y C CQ++
Sbjct: 495 DNKYYWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIK 554
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK---EEGDDSYALKL 461
+YI+ ++ D TG F EH E I+ G S ++L+ +++ + +D ++ KL
Sbjct: 555 KYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKENTDKNTEDCFSDKL 609
>gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa (japonica
cultivar-group)]
Length = 296
Score = 42.0 bits (97), Expect = 0.024
Identities = 25/132 (18%), Positives = 59/132 (44%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEK 536
WY +C CNK V + Y C C K + RY + +++SD T ++F++ A+
Sbjct: 29 WYMSCNLCNKIVIQK-NDKYHCRNCNKYPENTTPRYRLRLQISDHTTSTSCTIFDDVAQS 87
Query: 535 IIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPV 356
++ L + + D+ + +++ +F+ +++ + ++ P
Sbjct: 88 MLETPVSSLLNLLDGKNDEIPNI-IQQLCGKQLIFKFKLSEQNLTEGTPNYVVKKTFVP- 145
Query: 355 EHAAESKYLLEQ 320
++ E +YL+ +
Sbjct: 146 DYMLEKQYLINK 157
>ref|XP_666551.1| replication protein A 70kDa [Cryptosporidium hominis TU502]
gb|EAL36324.1| replication protein A 70kDa [Cryptosporidium hominis]
Length = 686
Score = 42.0 bits (97), Expect = 0.024
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTE----------------------TFGSGYWCEGCQKNDSECSL 614
D ++ +C C +KVTE + G Y C CQ++
Sbjct: 493 DNKYYWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIK 552
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK---EEGDDSYALKL 461
+YI+ ++ D TG F EH E I+ G S ++L+ +++ + +D ++ KL
Sbjct: 553 KYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKENTDKNTEDCFSDKL 607
>ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
gb|EAK90646.1| Rf-A (OB fold protein) [Cryptosporidium parvum]
Length = 707
Score = 42.0 bits (97), Expect = 0.024
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTE----------------------TFGSGYWCEGCQKNDSECSL 614
D ++ +C C +KVTE + G Y C CQ++
Sbjct: 514 DNKYYWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIK 573
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK---EEGDDSYALKL 461
+YI+ ++ D TG F EH E I+ G S ++L+ +++ + +D ++ KL
Sbjct: 574 KYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKENTDKNTEDCFSDKL 628
>ref|NP_198305.1| unknown protein [Arabidopsis thaliana]
Length = 426
Score = 41.6 bits (96), Expect = 0.032
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Frame = -1
Query: 766 VSLVCMPHKPLKPDQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSEC 620
V +VC + L D + +Y +C+ CNKKVT +WC+ + +
Sbjct: 197 VRVVCTIYA-LDLDWSWYYFSCRNCNKKVTHIHAGVNTTSLKSSKPRFWCDVYKNAVTNV 255
Query: 619 SLRYIMVVKVSDPTGEAWVSVFNEHAEKIIG--CSADELDRIRKEEGDDSYALKLKEATW 446
+Y++ VKV D TGE +F+ ++G C++ + E + L+
Sbjct: 256 QAKYMLYVKVMDGTGETKCLLFDTIYADMVGESCTSMLGGSFNETEDPNDVPDGLRNLVG 315
Query: 445 VPHLFRVSVTQHEYNNEK 392
LF VSV + + K
Sbjct: 316 KTFLFLVSVEKENIWDSK 333
>ref|NP_919093.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC22296.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC16155.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 566
Score = 41.2 bits (95), Expect = 0.042
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
D + WY +C+ C +V + FG Y C GC N + RY + V D T +A +F +
Sbjct: 288 DSSWWYNSCEKC-LRVVKPFGYTYKCTGCY-NIAMAVPRYKLSVLAGDDTADAVFILFGK 345
Query: 547 HAEKII 530
A++I+
Sbjct: 346 IAQRIV 351
>dbj|BAA31015.1| 361aa long hypothetical protein [Pyrococcus horikoshii OT3]
ref|NP_143719.1| hypothetical protein PH1893 [Pyrococcus horikoshii OT3]
Length = 361
Score = 40.8 bits (94), Expect = 0.054
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYW-CEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEK 536
Y AC C KKV G+G W C + + E I+ + D TG V++F + AE+
Sbjct: 218 YDACPECKKKVDYDPGTGVWICP--EHGEVEPIKMTILDFGLDDGTGYIRVTLFGDDAEE 275
Query: 535 IIGCSADEL-DRIRKEEGD----DSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
++G S++E+ ++I++ E A KL E + + + V + ++ + +R
Sbjct: 276 LLGVSSEEIAEKIKELENSGLTTKEAARKLAEEEFYKIIGKEIVVRGNVIEDRFLGLILR 335
Query: 370 SEA--PVEHAAESKYLLEQIAKL 308
+ + V++ E + + E++ KL
Sbjct: 336 ASSWEEVDYRKEIENIKEELEKL 358
>dbj|BAB01022.1| replication protein A1-like [Arabidopsis thaliana]
Length = 452
Score = 40.4 bits (93), Expect = 0.071
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFG-----------SGYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y C+ NKKV + +WCE C ++ + + + D
Sbjct: 236 DWPWYYFCCRAHNKKVVKEEAIKFEDVKLPQKPRFWCEICNGFAKSVVPKFWLHLHIMDQ 295
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL 509
TGEA +F+ HA++I+G +A +L
Sbjct: 296 TGEAKCMLFDSHAKEILGITAHDL 319
>ref|NP_189676.1| unknown protein [Arabidopsis thaliana]
Length = 509
Score = 40.4 bits (93), Expect = 0.071
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFG-----------SGYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y C+ NKKV + +WCE C ++ + + + D
Sbjct: 293 DWPWYYFCCRAHNKKVVKEEAIKFEDVKLPQKPRFWCEICNGFAKSVVPKFWLHLHIMDQ 352
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL 509
TGEA +F+ HA++I+G +A +L
Sbjct: 353 TGEAKCMLFDSHAKEILGITAHDL 376
>emb|CAB49209.1| RPA41 subunit of the hetero-oligomeric complex involved in
homologous recombination [Pyrococcus abyssi GE5]
ref|NP_125978.1| hypothetical protein PAB2163 [Pyrococcus abyssi GE5]
Length = 375
Score = 39.7 bits (91), Expect = 0.12
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRY-IMVVKVSDPTGEAWVSVFNEHAEK 536
Y AC C KKV G G W C ++ ++ I+ + D TG V++F + AE+
Sbjct: 232 YDACPECKKKVDYDEGLGVWI--CPEHGEVQPIKMTILDFGLDDGTGYIRVTLFGDDAEE 289
Query: 535 IIGCSADELDRIRKEEGDDSY-----ALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVR 371
++G S +E+ KE + A KL E + + R V + ++ + +R
Sbjct: 290 LLGVSPEEIAEKIKELEESGLTTKEAARKLAEDEFYNIIGREIVVRGNVIEDRFLGLILR 349
Query: 370 SEA--PVEHAAESKYLLEQIAKL 308
+ + V++ E + + E++ KL
Sbjct: 350 ASSWEDVDYRREIERIKEELEKL 372
>ref|NP_178646.1| unknown protein [Arabidopsis thaliana]
gb|AAC95166.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 456
Score = 39.3 bits (90), Expect = 0.16
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFG-----------SGYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y C+ NKKV + +WCE C ++ + + + D
Sbjct: 273 DWPCYYFCCRAHNKKVVKEEAIKLEDVKQPQKPRFWCEICNGFAKSVVAKFCLHLHIMDQ 332
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL 509
T EA +F+ HA++I+G +A +L
Sbjct: 333 TDEARCMLFDSHAKEILGTTAPQL 356
>ref|XP_477680.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC10358.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 640
Score = 38.9 bits (89), Expect = 0.21
Identities = 31/117 (26%), Positives = 50/117 (42%)
Frame = -1
Query: 760 LVCMPHKPLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDP 581
LV + K L + + WY AC C KK + +GS Y R+ + V D
Sbjct: 198 LVTVVIKKLNMEYSWWYTACDIC-KKTAKPYGSSY-------------SRFKLSVIAGDH 243
Query: 580 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQH 410
T + VF A+++IG S D L + G D ++ + ++ VS T++
Sbjct: 244 TADTTFIVFGRLAQRLIGRSVDAL-VMENPTGKDYIPREITDLLEKEFVWNVSFTEN 299
>dbj|BAD81690.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 474
Score = 38.9 bits (89), Expect = 0.21
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWC-EGCQKNDSECSLRYIMVVKVSDPTGEAWVS 560
L P Q+ W+ +C C++ T +GS Y C GC + +Y + + +D T A
Sbjct: 341 LSPSQSWWFSSCSRCHRAAT-AYGSSYKCSSGC--SSVTAIPKYRLCLIGTDGTNSAEFV 397
Query: 559 VFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQ 413
+F A++++G ++ I+ + D+ ++ F VSVT+
Sbjct: 398 LFGRVAQQVVG--RPVMNLIKFQGRSDNIPKEIAAVVSQKFTFAVSVTE 444
>ref|NP_567321.1| unknown protein [Arabidopsis thaliana]
emb|CAB81115.1| AT4g07450 [Arabidopsis thaliana]
gb|AAD48951.1| contains similarity to Oryza sativa replication protein A1
(GB:AF009179) [Arabidopsis thaliana]
Length = 439
Score = 38.5 bits (88), Expect = 0.27
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFG-----------SGYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y C+ NKKV E +WCE C ++ + + +
Sbjct: 222 DWPWYYFCCRAHNKKVVEEEAIKLEDVKLPQKPRFWCEICNGFAKYVVAKFWLHLHIMGQ 281
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL 509
TGEA +F+ HA++I G A EL
Sbjct: 282 TGEARCMLFDSHAKEIFGTIAPEL 305
>ref|XP_636195.1| hypothetical protein DDB0188462 [Dictyostelium discoideum]
gb|EAL62688.1| hypothetical protein DDB0188462 [Dictyostelium discoideum]
Length = 679
Score = 38.1 bits (87), Expect = 0.35
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
Y+ACK C K E GS C C +D E + Y M +K+SD V V + +++
Sbjct: 536 YKACKKCKKSCPE--GS---CPQCGSDDWEYA--YRMSLKLSDGDDAISVEVMGKTGDRL 588
Query: 532 IGCSADELDRIRKEE 488
G SA EL ++ +E+
Sbjct: 589 FGKSAAELYQMNQEQ 603
>ref|NP_850112.1| unknown protein [Arabidopsis thaliana]
gb|AAU44460.1| hypothetical protein AT2G28105 [Arabidopsis thaliana]
gb|AAX55130.1| hypothetical protein At2g28105 [Arabidopsis thaliana]
Length = 166
Score = 38.1 bits (87), Expect = 0.35
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -1
Query: 712 YRACKTCNKKVTET---FGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
YR C C + + F S +C+ C+ + + L Y +++ ++ V F+ A
Sbjct: 21 YRVCSRCQRVLPSDNNGFASSSFCKFCKSKEPK--LLYRILMSIATDASVKTVICFDRAA 78
Query: 541 EKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRI 380
+ GCSADE K + A + + + R+++T+ + N + R+
Sbjct: 79 TVLFGCSADEFFHFTKL---NPLAASMVNQVFDGEMLRMTLTRPQNRNAQHMRV 129
>gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza sativa (japonica
cultivar-group)]
Length = 786
Score = 37.7 bits (86), Expect = 0.46
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = -1
Query: 760 LVCMPHKPLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDP 581
+V + K + + + WY +C+ C + + +GS Y C GC N RY +V+ D
Sbjct: 493 IVTVTVKKICTENSWWYNSCRMCYR-TSRPYGSTYKCSGC-SNIGIPDPRYKVVLIAGDD 550
Query: 580 TGEAWVSVFNEHAEKIIGCSADEL--DRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHE 407
+ +A +F A ++I + L D E S L + +V + VS T+
Sbjct: 551 SCDATFILFGRIAHRLIRRPVESLIEDNPPNSEYIPSEIAALIDGKFV---WNVSFTR-- 605
Query: 406 YNNEKRQRITVRSEAPVEHAAESKYLL 326
N KR + +++ + V A+ LL
Sbjct: 606 -NTVKRSQESLQVNSIVSTASSGHSLL 631
>gb|AAU44445.1| hypothetical protein AT2G05642 [Arabidopsis thaliana]
Length = 364
Score = 37.7 bits (86), Expect = 0.46
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = -1
Query: 715 WYRACKTCNKKV-------TETFGSG-YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVS 560
+Y C C KKV TE +G Y CE C + S R+ + V V D TGEA
Sbjct: 117 FYIGCNICFKKVSPYFNPETEEIEAGKYECEKCDTFVTTTSTRFRVQVTVLDHTGEASFL 176
Query: 559 VFNEHAEKIIGCSADEL 509
+F++ K+I S EL
Sbjct: 177 LFDQDVIKLIHKSTYEL 193
>ref|XP_796317.1| PREDICTED: similar to toll-like receptor 4 isoform A
[Strongylocentrotus purpuratus]
Length = 901
Score = 37.7 bits (86), Expect = 0.46
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +2
Query: 410 MLCDADAEQVRNPGGFLELQSITVVPLLFPDPIKLVGAAANDLLCMLVEHRDPCLASRIG 589
M CD DAEQ + + EL SI P PD IK +G +N++ +L ++
Sbjct: 38 MTCDYDAEQKKADCYYRELDSI---PQNLPDDIKELGVGSNNITFILSSSFKKYPLIQVL 94
Query: 590 DLDDHDVSQ*AFRVILLASLAPV 658
DL D+D+ R+I AS P+
Sbjct: 95 DLSDNDI-----RIIESASFYPL 112
>gb|ABA96519.1| hypothetical protein LOC_Os12g06230 [Oryza sativa (japonica
cultivar-group)]
Length = 2248
Score = 37.7 bits (86), Expect = 0.46
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = -1
Query: 715 WYRACKTCNKKVTETFGSGYWCEGCQKNDSEC------SLRYIMVVKVSDPTGEAWVSVF 554
WY AC C KK + +G Y C D C S R+ + + D T E +F
Sbjct: 1711 WYTACDIC-KKTAKPYGRAYRC-----GDPTCPPIVSASPRFKLNIIAGDETAETTFILF 1764
Query: 553 NEHAEKIIGCSADELDRIRKEEGDDSY 473
A+++IG S D L + + D Y
Sbjct: 1765 GRLAQRLIGRSVDTL--LHENPSDKDY 1789
>ref|XP_472095.1| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar-group)]
emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 37.4 bits (85), Expect = 0.60
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = -1
Query: 733 KPDQNMWYRACKTCNKKVTETFGSGYWCEG--CQKNDSECSLRYIMVVKVSDPTGEAWVS 560
K D + WY AC C ++ +G Y C G C S R+ + + D T +
Sbjct: 856 KIDGSWWYVACDRC-RRTARPYGKTYRCGGGDCPAT-VPASPRFKLGLIAGDDTADTKFV 913
Query: 559 VFNEHAEKIIGCSADELDRIRKEEGDDSYALKL------KEATWVPHLFRVSVTQHEYNN 398
+F A++IIG S + L + + D++Y K K+ TW VS+T +N
Sbjct: 914 MFGRMAQRIIGKSVENL--LDQHPADEAYIPKQITDLLEKQFTW-----NVSMTDTTISN 966
>ref|XP_745376.1| replication factor A-related protein [Plasmodium chabaudi chabaudi]
emb|CAH78783.1| replication factor A-related protein, putative [Plasmodium
chabaudi]
Length = 482
Score = 37.4 bits (85), Expect = 0.60
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 20/165 (12%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSG------------------YWCEGCQKNDSECS 617
K + + +Y AC C KK+ + Y C C +ND +
Sbjct: 297 KSKENEHRFYYPACTKCKKKLLSSGQDNTQGMDYDNSNFNNDESCVYSCMNCDENDVKPF 356
Query: 616 LRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYALKLKEATWV 443
Y D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 357 YNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDFLYKEYKVV 416
Query: 442 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAKL 308
V V+Q YN +R T P ++ ++ YLL +I L
Sbjct: 417 -----VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 455
>gb|ABA94881.1| hypothetical protein LOC_Os11g40920 [Oryza sativa (japonica
cultivar-group)]
Length = 2175
Score = 37.0 bits (84), Expect = 0.79
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
+ + WY +C+ C + ++ +GS Y C C N RY +V+ D + A +F
Sbjct: 1887 ENSWWYNSCRLCYR-TSKPYGSSYKCSSC-SNIGIPDPRYKVVLIAGDASSNATFILFGR 1944
Query: 547 HAEKIIGCSADEL 509
A ++I S + L
Sbjct: 1945 VAHRLIKKSVESL 1957
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
gb|ABA92343.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 37.0 bits (84), Expect = 0.79
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNE 548
+ + WY +C+ C + ++ +GS Y C C N RY +V+ D + A +F
Sbjct: 1869 ENSWWYNSCRLCYR-TSKPYGSSYKCSSC-SNIGIPDPRYKVVLIAGDASSNATFILFGR 1926
Query: 547 HAEKIIGCSADEL 509
A ++I S + L
Sbjct: 1927 VAHRLIKKSVESL 1939
>ref|NP_198375.1| unknown protein [Arabidopsis thaliana]
Length = 384
Score = 36.6 bits (83), Expect = 1.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 658 YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSA 518
+WCE C ++ + + + D TGEA +F+ HA++I+G +A
Sbjct: 216 FWCEICNGFAKSVVAKFWLHLHIMDQTGEARCMLFDSHAKEILGTTA 262
>ref|XP_778757.1| hypothetical protein GLP_82_33470_32019 [Giardia lamblia ATCC
50803]
gb|EAA41969.1| GLP_82_33470_32019 [Giardia lamblia ATCC 50803]
Length = 483
Score = 36.6 bits (83), Expect = 1.0
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
YR C +C + ++ C CQ+ + + + +SD +++F+ +A +
Sbjct: 352 YRGCASCKCALRDS----PICPKCQETSAGEKYYWRIGGNISDVLAHTRITIFDPYASTL 407
Query: 532 IGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 359
+G SADE E GDD L + V V +TQ +Y+ R + AP
Sbjct: 408 MGMSADEF----MERGDDEKLHLLSKVLEVD--VAVKMTQGKYDGRDRTNLMGIELAP 459
>gb|AAD15369.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 339
Score = 36.6 bits (83), Expect = 1.0
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = -1
Query: 739 PLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKND-----SECSLRYIMVVKVSDPTG 575
P P+ +++ R+CK C KKVT + G ++ + + S+ M++ V D TG
Sbjct: 113 PPFPEVDVFVRSCKVCKKKVTHIYMMGCMVSITKERNHVYGVTCASMWSQMLLLVIDNTG 172
Query: 574 EAWVSVFNEHAEKIIGCSA 518
EA + +F+ +IIG S+
Sbjct: 173 EAKLLLFDSICSEIIGESS 191
>gb|AAD15477.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 527
Score = 36.6 bits (83), Expect = 1.0
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y CKTCNKKV +WCE C+ V V
Sbjct: 186 DWAWYYINCKTCNKKVNHIHAGVNGVNNKGKKPRFWCETCKS----------FVTNVVSS 235
Query: 580 TGEAWVSVFNEHAEKIIG 527
TGEA + +F+ +IIG
Sbjct: 236 TGEAKLLLFDSICSEIIG 253
>gb|AAL82144.1| replication factor A related protein [Pyrococcus furiosus DSM 3638]
ref|NP_579749.1| hypothetical protein PF2020 [Pyrococcus furiosus DSM 3638]
Length = 358
Score = 36.2 bits (82), Expect = 1.3
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRY-IMVVKVSDPTGEAWVSVFNEHAEK 536
Y AC C KKV G W C ++ ++ I+ + D +G +++F + AE+
Sbjct: 215 YDACPECKKKVDYDPGMDVWI--CPEHGEVEPIKITILDFGLDDGSGYIRITLFGDDAEE 272
Query: 535 IIGCSADELDRIRKEEGDDSYALKLKEA 452
++G +E+ + KE +S + LKEA
Sbjct: 273 LLGVGPEEIAQKLKEM--ESMGMTLKEA 298
>dbj|BAB47563.1| RPA41 [Pyrococcus furiosus]
Length = 360
Score = 36.2 bits (82), Expect = 1.3
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -1
Query: 712 YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRY-IMVVKVSDPTGEAWVSVFNEHAEK 536
Y AC C KKV G W C ++ ++ I+ + D +G +++F + AE+
Sbjct: 217 YDACPECKKKVDYDPGMDVWI--CPEHGEVEPIKITILDFGLDDGSGYIRITLFGDDAEE 274
Query: 535 IIGCSADELDRIRKEEGDDSYALKLKEA 452
++G +E+ + KE +S + LKEA
Sbjct: 275 LLGVGPEEIAQKLKEM--ESMGMTLKEA 300
>gb|AAB85861.1| replication factor A related protein [Methanothermobacter
thermautotrophicus str. Delta H]
ref|NP_276500.1| replication factor A related protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 181
Score = 35.8 bits (81), Expect = 1.8
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -1
Query: 703 CKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVV--KVSDPTGEAWVSVFNEHAEKII 530
C +CN+++ C C + E RY++++ ++ D TGE ++ F AE I+
Sbjct: 67 CPSCNERLD--LSDENICNFCGELVDEP--RYLLMIPGRIMDDTGEVMITFFGREAESIL 122
Query: 529 GCSADELDRIRKEEGDDS 476
+ DE+ I + D+S
Sbjct: 123 EMTTDEVVNIINQSADES 140
>ref|XP_725495.1| replication protein A large subunit [Plasmodium yoelii yoelii str.
17XNL]
gb|EAA17060.1| replication protein A large subunit, putative [Plasmodium yoelii
yoelii]
Length = 487
Score = 35.8 bits (81), Expect = 1.8
Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 20/165 (12%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSG------------------YWCEGCQKNDSECS 617
K + + +Y AC C KK+ + Y C C +N+ +
Sbjct: 302 KSKENEHRFYYPACTKCKKKLLSSGQDNTQGGDYDNSNFNNEENCVYSCMNCDENNVKPF 361
Query: 616 LRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYALKLKEATWV 443
Y D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 362 YNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDSLDYLFNYDFLYKEYKVV 421
Query: 442 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAKL 308
V V+Q YN +R T P ++ ++ YLL +I L
Sbjct: 422 -----VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 460
>gb|ABD65118.1| hypothetical protein 31.t00031 [Brassica oleracea]
Length = 467
Score = 35.8 bits (81), Expect = 1.8
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = -1
Query: 736 LKPDQNMWYRACKTCNKKV------TETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTG 575
++ D +Y +CK C+KKV + G Y+C C+ + RY + + V D T
Sbjct: 244 IESDMGWFYLSCKVCSKKVQTVPNDNDDGGFKYFCTKCKVYTPKMLPRYKLHLVVLDNTS 303
Query: 574 EAWVSVFNEHAEKIIGCSADEL-DRIRKE-EGDDSYALKLKEATWVPHLFRVSVTQHEY 404
+F+ +++ EL ++ E + D+ + L +LF++ + + Y
Sbjct: 304 NTKFLLFDNLGLQLLNQPCIELTGKVTDEVQNPDALPIALTNLVGKTYLFKIVIEKENY 362
>ref|XP_656777.1| replication factor A-related protein [Entamoeba histolytica
HM-1:IMSS]
gb|EAL51392.1| replication factor A-related protein [Entamoeba histolytica
HM-1:IMSS]
Length = 569
Score = 35.8 bits (81), Expect = 1.8
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 721 NMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHA 542
++ Y C+TC K E + C + + ++ + + E W +F+E A
Sbjct: 453 DLTYYGCETCRSKKEEGYSYCNKCNRKRNGKLYYKVNVLLENNEEEESFEQWAIIFDECA 512
Query: 541 EKIIGCSADEL-----DRIRKE 491
K+ SADE+ D ++KE
Sbjct: 513 RKLFNMSADEMNVLDEDDVKKE 534
>gb|AAT82272.1| thiazole biosynthesis protein ThiG [Propionibacterium acnes
KPA171202]
ref|YP_055230.1| thiazole synthase [Propionibacterium acnes KPA171202]
sp|Q6AAE4|THIG_PROAC Thiazole biosynthesis protein thiG
Length = 277
Score = 35.4 bits (80), Expect = 2.3
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 LELQSITVVPLLFPDPIKLVGAA----ANDLLCMLVEHRDPCLASRIGDL 595
++L+ I L PDP++LV AA AND + + + DP +A R+ DL
Sbjct: 106 VKLEVIADEDTLLPDPVELVNAAEQLVANDFVVLAYTNDDPAIAKRLEDL 155
>ref|NP_918352.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 635
Score = 35.4 bits (80), Expect = 2.3
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWV 563
K L + + WY AC C KK + +G+ Y R+ + V D TG+
Sbjct: 208 KKLNMEYSWWYTACDIC-KKTAKPYGNLY-------------RRFKLSVIAGDDTGDTTF 253
Query: 562 SVFNEHAEKIIGCSADEL 509
+F A+++IG S + L
Sbjct: 254 IIFGHLAQRLIGRSVEAL 271
>ref|XP_680462.1| replication factor A-related protein [Plasmodium berghei strain
ANKA]
emb|CAH98106.1| replication factor A-related protein, putative [Plasmodium berghei]
Length = 514
Score = 35.4 bits (80), Expect = 2.3
Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 20/165 (12%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSG------------------YWCEGCQKNDSECS 617
K + + +Y AC C KK+ + Y C C +N+ +
Sbjct: 330 KSKENEHRFYYPACTKCKKKLLSSGQDSAQGVDYDNSNFNNEENCVYSCMNCDENNVKPF 389
Query: 616 LRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYALKLKEATWV 443
Y D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 390 YNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDFLYKEYKVV 449
Query: 442 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAKL 308
V V+Q YN +R T P ++ ++ YLL +I L
Sbjct: 450 -----VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 488
>ref|NP_179052.2| unknown protein [Arabidopsis thaliana]
Length = 544
Score = 35.4 bits (80), Expect = 2.3
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGS-----------GYWCEGCQKNDSECSLRYIMVVKVSDP 581
D +Y CKTCNKKV +WCE C+ V D
Sbjct: 275 DWAWYYINCKTCNKKVNHIHAGVNGVNNKGKKPRFWCETCKS-------------FVMDS 321
Query: 580 TGEAWVSVFNEHAEKIIG 527
TGEA + +F+ +IIG
Sbjct: 322 TGEAKLLLFDSICSEIIG 339
>ref|XP_749668.1| C6 transcription factor [Aspergillus fumigatus Af293]
gb|EAL87630.1| C6 transcription factor, putative [Aspergillus fumigatus Af293]
Length = 763
Score = 35.0 bits (79), Expect = 3.0
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Frame = -1
Query: 709 RACKTCNKKVTETFGSGYWCEGCQKNDSECSL----RYIMVVKVSDPTGEA--WVSVFNE 548
RAC+ C ++ + G C+ CQ++ CS R M ++S+ T + + ++ +
Sbjct: 92 RACENCREQKAKCSGHRPTCQRCQESGIRCSYGDRKREKMAKQLSELTNQVQFYEALLRD 151
Query: 547 HAEKIIGCSADELDRIRKEEGDD------------SYALKLKEATWVP----HLFRVSVT 416
K+ SA +++I KE+ D S AL+L +A V L + T
Sbjct: 152 IYPKLEPQSAQYVEQILKEQNPDKEQFSGQRTATPSPALRLSDAARVSSPIFSLGALDYT 211
Query: 415 QHEYNNEKRQRIT--VRSEAPVEHAAESKYLLEQIA 314
++N +++ + V + + K LLEQ++
Sbjct: 212 SEDFNRDEKIQAMGFVGEHSEIAWIYRLKRLLEQVS 247
>ref|XP_466062.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25421.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25604.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 197
Score = 34.7 bits (78), Expect = 3.9
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVF 554
D+ WY +C+ C K V + +GS Y C C N + RY +VV D + +A +F
Sbjct: 141 DKCWWYGSCQRCFK-VAKPYGSTYKCTSC-SNIAVAVPRYRIVVIAGDDSDDAMFVLF 196
>ref|XP_466063.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25422.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25605.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 176
Score = 34.7 bits (78), Expect = 3.9
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 727 DQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVF 554
D+ WY +C+ C K V + +GS Y C C N + RY +VV D + +A +F
Sbjct: 120 DKCWWYGSCQRCFK-VAKPYGSTYKCTSC-SNIAVAVPRYRIVVIAGDDSDDAMFVLF 175
>emb|CAD51733.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
ref|NP_704590.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
Length = 484
Score = 34.7 bits (78), Expect = 3.9
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 17/157 (10%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKV---------------TETFGSGYWCEGCQKNDSECSLRY 608
K + + +Y AC C KK+ E Y C C +N+ + Y
Sbjct: 302 KSKENEHRFYYPACMKCKKKLLSSGHDNNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNY 361
Query: 607 IMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYALKLKEATWVPHL 434
D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 362 TFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIV--- 418
Query: 433 FRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLE 323
V V Q YN +R T P++ + L E
Sbjct: 419 --VRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTE 453
>ref|NP_917821.1| OSJNBb0035I14.14 [Oryza sativa (japonica cultivar-group)]
Length = 361
Score = 34.3 bits (77), Expect = 5.1
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = -1
Query: 742 KPLKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRY-IMVVKVSDPTGE-- 572
+ L P + WY AC C K+ T G+ Y C C + E R IM + SD +
Sbjct: 171 RDLVPAEPWWYIACSIC-KRGTAREGNAYKCPRCSTDAIETRYRVAIMGIDPSDLANDQA 229
Query: 571 --AWVSVFNEHAEKIIG 527
A + F E E++IG
Sbjct: 230 KAAEFTFFGEIGEQLIG 246
>ref|XP_581841.2| PREDICTED: similar to Stabilin-1 precursor (FEEL-1 protein) (MS-1
antigen) [Bos taurus]
Length = 2682
Score = 33.9 bits (76), Expect = 6.7
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = -1
Query: 700 KTCNKKVTETFGSGYWCEGCQK----NDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
+TC T G G+ C D S + +++ D G+ +VF HA+ +
Sbjct: 1676 RTCACDAVRTVGDGFTCRARISLELLRDKHASFFSLHLLEYKDLKGDGPFTVFVPHADLL 1735
Query: 532 IGCSADELDRIR 497
S DEL RIR
Sbjct: 1736 TNMSQDELARIR 1747
>gb|AAH31166.1| Stab1 protein [Mus musculus]
Length = 1238
Score = 33.5 bits (75), Expect = 8.7
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 700 KTCNKKVTETFGSGYWCEGCQK----NDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
+TC+ T T G G C G + S + +++ + G+ +VF HA+ I
Sbjct: 233 RTCSCDATHTVGDGITCHGRVGLELLRNKYASFFSLHLLEYKELKGDGPFTVFVPHADLI 292
Query: 532 IGCSADELDRIR 497
S DEL RIR
Sbjct: 293 SNMSQDELARIR 304
>gb|AAS55083.1| UDP-glucose glucosyltransferase [Rhodiola sachalinensis]
Length = 480
Score = 33.5 bits (75), Expect = 8.7
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Frame = +2
Query: 236 PEGTSRRAALNEPPERLHLLLASSKLRYLFKQVLGF---SCVLDRRFTPHSD------SL 388
P+G ++ P H A+ LR F+Q+L CV+ F P S +
Sbjct: 79 PDGCENLDSVPSPQHVFHFFEAAGSLREPFEQLLEEHKPDCVVGDMFFPWSTDSAAKFGI 138
Query: 389 PFLVI----VFMLCDADAEQVRNPGGFLELQSIT---VVPLLFPDPIKLVGAAANDLLCM 547
P LV F LC +A ++ P +L + S V+P L PD IKL + + +
Sbjct: 139 PRLVFHGTSYFALCAGEAVRIHKP--YLSVSSDDEPFVIPGL-PDEIKLTKSQLP--MHL 193
Query: 548 LVEHRDPCLASRIGDLDDHDVSQ*AFRVILLASLAP 655
L +D LA + ++ + +VS V + L P
Sbjct: 194 LEGKKDSVLAQLLDEVKETEVSSYGVIVNSIYELEP 229
>gb|AAL91671.2| stabilin-1 [Mus musculus]
ref|NP_619613.1| stabilin 1 [Mus musculus]
sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 precursor (FEEL-1 protein)
Length = 2571
Score = 33.5 bits (75), Expect = 8.7
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 700 KTCNKKVTETFGSGYWCEGCQK----NDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKI 533
+TC+ T T G G C G + S + +++ + G+ +VF HA+ I
Sbjct: 1566 RTCSCDATHTVGDGITCHGRVGLELLRNKYASFFSLHLLEYKELKGDGPFTVFVPHADLI 1625
Query: 532 IGCSADELDRIR 497
S DEL RIR
Sbjct: 1626 SNMSQDELARIR 1637
>ref|ZP_00904727.1| Twin-arginine translocation pathway signal [Shewanella sp. W3-18-1]
gb|EAP55475.1| Twin-arginine translocation pathway signal [Shewanella sp. W3-18-1]
Length = 325
Score = 33.5 bits (75), Expect = 8.7
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -1
Query: 685 KVTETFGSGYWCEGCQKNDSECSLRYI--MVVKVSDPTGEA----WVSVFNEHAEKIIGC 524
K ++FG + C + + SL Y +VK GE W + + A K+I
Sbjct: 74 KAAKSFGG----KVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWAEISWDEAYKLI-- 127
Query: 523 SADELDRIRKEEGDDSYALKLKEATWVPHLFRVS 422
AD L++I+KE G ++ A K + HLF ++
Sbjct: 128 -ADNLNKIKKEHGPEAVAFSSKSGSLEQHLFHLA 160
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,589,904,800
Number of Sequences: 3454138
Number of extensions: 33194062
Number of successful extensions: 89777
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 85494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89633
length of database: 1,185,965,366
effective HSP length: 127
effective length of database: 747,289,840
effective search space used: 94905809680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)