BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478290.2.1
(1343 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB20581.1| response regulator 6 [Zea mays] 437 e-121
dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa (... 276 1e-72
emb|CAI79413.1| Type A response regulator 9 [Oryza sativa (... 275 4e-72
gb|ABA91415.1| response regulator 6 [Oryza sativa (japonica... 268 5e-70
ref|NP_191263.1| ARR9 (RESPONSE REACTOR 4); transcription r... 210 1e-52
dbj|BAB20580.1| response regulator 5 [Zea mays] 207 1e-51
ref|NP_181663.1| ATRR3 (RESPONSE REGULATOR 3); transcriptio... 206 2e-51
ref|NP_914660.1| putative response regulator [Oryza sativa ... 204 7e-51
gb|AAQ10677.1| type-A response regulator [Catharanthus roseus] 200 1e-49
dbj|BAB20579.1| response regulator 4 [Zea mays] 195 4e-48
gb|ABA96406.1| response regulator-like protein [Oryza sativ... 183 1e-44
ref|NP_201097.1| ARR6 (RESPONSE REGULATOR 6); transcription... 164 6e-39
gb|AAK14395.1| response regulator protein [Dianthus caryoph... 164 6e-39
ref|NP_567037.1| ARR17; transcription regulator/ two-compon... 164 8e-39
gb|AAQ10675.1| type-A response regulator [Catharanthus roseus] 164 1e-38
ref|NP_177627.1| ARR15 (RESPONSE REGULATOR 15); transcripti... 163 2e-38
ref|NP_173339.1| ARR7 (RESPONSE REGULATOR 7); transcription... 163 2e-38
gb|AAC26635.1| two-component response regulator homolog [Ar... 163 2e-38
ref|NP_190393.1| ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); t... 163 2e-38
dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana] 163 2e-38
ref|NP_181599.1| ARR16; transcription regulator/ two-compon... 161 5e-38
ref|NP_172517.1| ARR4 (RESPONSE REGULATOR 4); transcription... 161 5e-38
ref|NP_176202.1| ARR3 (RESPONSE REGULATOR 3); transcription... 159 3e-37
gb|AAQ10676.1| type-A response regulator [Catharanthus roseus] 159 3e-37
ref|XP_468534.1| putative response regulator [Oryza sativa ... 145 5e-33
dbj|BAB17300.1| response regulator [Zea mays] 144 6e-33
ref|XP_474315.1| OSJNBb0004A17.13 [Oryza sativa (japonica c... 144 1e-32
ref|XP_466892.1| putative response regulator [Oryza sativa ... 142 2e-32
dbj|BAA82873.1| ZmRR2 [Zea mays] >gi|6009897|dbj|BAA85113.1... 142 2e-32
emb|CAI79409.1| Type A response regulator 5 [Oryza sativa (... 140 2e-31
emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa (japonica cu... 140 2e-31
dbj|BAA85112.1| response regulator 1 [Zea mays] >gi|4512216... 136 2e-30
emb|CAB88041.1| response regulator-like protein [Arabidopsi... 132 3e-29
ref|NP_911990.1| putative response regulator [Oryza sativa ... 128 6e-28
ref|XP_466223.1| putative response regulator 7 [Oryza sativ... 125 4e-27
dbj|BAB20582.1| response regulator 7 [Zea mays] 123 2e-26
emb|CAI79405.1| Type A response regulator 1 [Oryza sativa (... 120 1e-25
dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa (j... 120 2e-25
dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana] 119 2e-25
dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa (... 109 3e-22
gb|AAP32005.1| putative two-component system response regul... 105 3e-21
dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa (... 103 2e-20
ref|XP_482086.1| putative response regulator [Oryza sativa ... 103 2e-20
ref|XP_472626.1| P0076O17.11 [Oryza sativa (japonica cultiv... 97 1e-18
ref|XP_482091.1| response regulator-like protein [Oryza sat... 93 3e-17
ref|XP_481928.1| putative response regulator [Oryza sativa ... 88 9e-16
ref|NP_178754.1| DNA binding / two-component response regul... 82 4e-14
dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lem... 81 1e-13
dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lem... 78 1e-12
pir||C84645 hypothetical protein At2g25180 [imported] - Ara... 77 2e-12
dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa ... 77 2e-12
ref|NP_180090.2| ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12);... 77 2e-12
ref|XP_479630.1| putative pseudo-response regulator [Oryza ... 77 2e-12
dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa ... 77 2e-12
dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lem... 75 8e-12
gb|ABA91559.1| timing of CAB expression 1, putative [Oryza ... 74 2e-11
ref|ZP_00673521.1| Guanylate cyclase:Response regulator rec... 72 4e-11
gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis tha... 72 5e-11
ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cycl... 72 5e-11
gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis tha... 72 7e-11
ref|NP_568919.1| APRR3 (PSEUDO-RESPONSE REGULATOR 3); trans... 71 9e-11
dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lem... 71 1e-10
gb|EAN27583.1| PAS:GGDEF [Magnetococcus sp. MC-1] >gi|69260... 70 2e-10
dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa ... 70 3e-10
dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa ... 70 3e-10
gb|EAO25129.1| Response regulator receiver:ATP-binding regi... 70 3e-10
ref|XP_493854.1| putative pseudo-response regulator [Oryza ... 70 3e-10
ref|NP_568107.1| APRR7 (PSEUDO-RESPONSE REGULATOR 7); trans... 69 3e-10
dbj|BAC08574.1| two-component hybrid sensor & regulator [Th... 69 3e-10
dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa... 69 3e-10
ref|NP_566085.1| APRR9 (PSEUDO-RESPONSE REGULATOR 9); trans... 69 4e-10
gb|AAS82604.1| putative response regulator [Zea mays] 69 4e-10
dbj|BAD82798.1| putative response regulator 11 [Oryza sativ... 69 6e-10
ref|ZP_00345566.1| COG0784: FOG: CheY-like receiver [Nostoc... 68 8e-10
gb|ABB32930.1| response regulator receiver sensor signal tr... 68 8e-10
gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vu... 68 1e-09
gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vu... 68 1e-09
gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vu... 68 1e-09
gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare s... 68 1e-09
gb|AAK86868.1| AGR_C_1956p [Agrobacterium tumefaciens str. ... 67 1e-09
ref|XP_464340.1| putative response regulator 9 [Oryza sativ... 67 1e-09
gb|EAR88912.1| Protein kinase domain containing protein [Te... 67 1e-09
dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lem... 67 1e-09
gb|AAL42073.1| two component response regulator [Agrobacter... 67 1e-09
gb|AAZ48623.1| Response regulator receiver:CheW-like protei... 67 2e-09
gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum... 67 2e-09
dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125] >gi|1561... 67 2e-09
dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lem... 67 2e-09
gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana] >gi... 66 3e-09
dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana] 66 3e-09
ref|ZP_00768957.1| Response regulator receiver:CheW-like pr... 66 3e-09
ref|ZP_00671488.1| Guanylate cyclase:Response regulator rec... 66 3e-09
ref|NP_176938.1| ARR11 (RESPONSE REGULATOR 11); transcripti... 66 3e-09
ref|NP_568446.1| APRR5 (PSEUDO-RESPONSE REGULATOR 5); trans... 66 3e-09
ref|ZP_00505311.1| PAS domain [Polaromonas sp. JS666] >gi|6... 66 3e-09
ref|YP_470029.1| two-component response regulator protein [... 66 4e-09
ref|ZP_01074277.1| Response regulator receiver [Marinomonas... 66 4e-09
ref|YP_477370.1| response regulator [Cyanobacteria bacteriu... 66 4e-09
gb|ABB38373.1| response regulator receiver domain protein (... 66 4e-09
gb|ABD32712.1| Response regulator receiver; CCT [Medicago t... 65 5e-09
dbj|BAB72596.1| two-component hybrid sensor and regulator [... 65 5e-09
emb|CAB86035.1| putative protein [Arabidopsis thaliana] 65 6e-09
ref|YP_504163.1| response regulator receiver domain protein... 65 6e-09
emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana] 65 6e-09
gb|AAS96546.1| chemotaxis protein CheY [Desulfovibrio vulga... 65 6e-09
emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Woli... 65 8e-09
ref|ZP_01135093.1| putative response regulator [Pseudoalter... 65 8e-09
dbj|BAC50388.1| two-component response regulator [Bradyrhiz... 64 1e-08
emb|CAC48744.1| putative regulatory protein [Sinorhizobium ... 64 1e-08
gb|AAX62130.1| response regulator protein [Bacillus thuring... 64 1e-08
ref|ZP_00564123.1| Response regulator receiver:CheW-like pr... 64 1e-08
gb|AAK87409.1| AGR_C_3010p [Agrobacterium tumefaciens str. ... 64 2e-08
emb|CAH09993.1| putative two-component system sensor kinase... 64 2e-08
gb|AAL42633.1| two component response regulator [Agrobacter... 64 2e-08
gb|AAZ37468.1| sensory box protein/response regulator [Pseu... 64 2e-08
gb|ABB30744.1| response regulator receiver domain protein (... 64 2e-08
ref|NP_566561.2| ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); t... 64 2e-08
gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana] 64 2e-08
ref|ZP_00109094.1| COG4585: Signal transduction histidine k... 64 2e-08
dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana] 64 2e-08
ref|NP_850600.2| ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); t... 64 2e-08
gb|EAR86994.1| Protein kinase domain containing protein [Te... 64 2e-08
ref|NP_296368.1| CheA-related protein [Deinococcus radiodur... 64 2e-08
dbj|BAB55874.1| response regulator 9 [Zea mays] 63 2e-08
dbj|BAD51273.1| two-component system sensor histidine kinas... 63 2e-08
ref|ZP_00819634.1| Response regulator receiver:CheW-like pr... 63 3e-08
gb|AAL42303.1| two component response regulator [Agrobacter... 63 3e-08
pir||T02680 hypothetical protein At2g46790 [imported] - Ara... 63 3e-08
ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium disc... 63 3e-08
gb|EAN28205.1| Response regulator receiver:CheW-like protei... 63 3e-08
gb|AAR34364.1| sensory box histidine kinase/response regula... 63 3e-08
ref|ZP_00766223.1| Response regulator receiver:ATP-binding ... 62 4e-08
ref|NP_194920.1| ARR10 (ARABIDOPSIS RESPONSE REGULATOR 10);... 62 4e-08
ref|YP_475726.1| response regulator [Cyanobacteria bacteriu... 62 4e-08
ref|ZP_00859928.1| GGDEF [Bradyrhizobium sp. BTAi1] >gi|785... 62 4e-08
gb|AAQ10678.1| type-B response regulator [Catharanthus roseus] 62 4e-08
ref|ZP_00674273.1| Guanylate cyclase:Response regulator rec... 62 4e-08
ref|ZP_00814745.1| Response regulator receiver:CheW-like pr... 62 4e-08
ref|ZP_00903075.1| Response regulator receiver:CheW-like pr... 62 4e-08
dbj|BAD72541.1| putative response regulator 9 [Oryza sativa... 62 4e-08
dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma sub... 62 5e-08
emb|CAC45873.1| PUTATIVE TRANSCRIPTION REGULATOR (WITH TAND... 62 5e-08
ref|YP_436385.1| Signal transduction histidine kinase [Hahe... 62 5e-08
ref|ZP_00106448.1| COG0642: Signal transduction histidine k... 62 5e-08
ref|ZP_00109922.1| COG0642: Signal transduction histidine k... 62 5e-08
gb|AAX37306.1| CheY [Desulfovibrio gigas] 62 5e-08
emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomona... 62 5e-08
ref|ZP_00692360.1| Response regulator receiver [Rhodoferax ... 62 7e-08
gb|AAR34661.1| sensory box sensor histidine kinase/response... 62 7e-08
gb|AAM36740.1| RpfC protein [Xanthomonas axonopodis pv. cit... 62 7e-08
ref|YP_460259.1| signal transduction histidine kinase [Synt... 62 7e-08
ref|ZP_00846142.1| GGDEF [Rhodopseudomonas palustris BisB18... 62 7e-08
ref|XP_507543.1| PREDICTED OJ1695_H09.29 gene product [Oryz... 62 7e-08
dbj|BAA17201.1| CheY subfamily [Synechocystis sp. PCC 6803]... 62 7e-08
ref|ZP_01170785.1| sensor histidine kinase [Bacillus sp. NR... 62 7e-08
ref|ZP_00673284.1| Guanylate cyclase:Response regulator rec... 62 7e-08
sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC 61 9e-08
ref|YP_234190.1| PAS:GGDEF [Pseudomonas syringae pv. syring... 61 9e-08
sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC 61 9e-08
ref|ZP_00809953.1| GGDEF [Rhodopseudomonas palustris BisA53... 61 9e-08
ref|ZP_00520395.1| Response regulator receiver [Solibacter ... 61 9e-08
dbj|BAB41137.1| response regulator 8 [Zea mays] 61 9e-08
ref|ZP_00671342.1| Response regulator receiver:ATP-binding ... 61 9e-08
ref|ZP_01016345.1| putative diguanylate cyclase (GGDEF) [Pa... 61 9e-08
dbj|BAB68269.1| response regulator 10 [Zea mays] 61 9e-08
sp|Q9LYP5|ARR21_ARATH Putative two-component response regul... 61 9e-08
ref|ZP_00518336.1| Response regulator receiver [Crocosphaer... 61 9e-08
ref|ZP_00674272.1| Guanylate cyclase:Response regulator rec... 61 9e-08
ref|ZP_01113979.1| putative two-component system sensory hi... 61 9e-08
emb|CAB89845.1| fused two-component sensor-regulator protei... 61 9e-08
gb|AAM41145.1| RpfC protein [Xanthomonas campestris pv. cam... 61 9e-08
ref|ZP_01126435.1| phosphate regulon response regulator Pho... 61 1e-07
ref|ZP_00054733.1| COG0784: FOG: CheY-like receiver [Magnet... 61 1e-07
ref|NP_791108.1| sensory box protein/response regulator [Ps... 61 1e-07
ref|ZP_00506684.1| PAS domain [Polaromonas sp. JS666] >gi|6... 61 1e-07
ref|ZP_00552815.1| IMP dehydrogenase/GMP reductase:Response... 61 1e-07
ref|ZP_00587386.1| GGDEF [Shewanella amazonensis SB2B] >gi|... 61 1e-07
ref|ZP_01093313.1| sensory transduction histidine kinase [B... 61 1e-07
emb|CAI87668.1| putative two-component response regulator [... 61 1e-07
dbj|BAC47553.1| two-component hybrid sensor and regulator [... 61 1e-07
ref|YP_478157.1| response regulator [Cyanobacteria bacteriu... 61 1e-07
ref|YP_476104.1| response regulator [Cyanobacteria bacteriu... 61 1e-07
ref|NP_178285.1| ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14);... 60 2e-07
gb|AAM65694.1| putative two-component response regulator pr... 60 2e-07
dbj|BAB75796.1| two-component hybrid sensor and regulator [... 60 2e-07
gb|AAQ83694.1| pseudo-response regulator protein [Oryza sat... 60 2e-07
dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae... 60 2e-07
dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana] >gi|519... 60 2e-07
ref|ZP_01160189.1| hypothetical putative regulatory compone... 60 2e-07
emb|CAA66459.1| rpfC [Xanthomonas oryzae] 60 2e-07
dbj|BAE52436.1| Chemotaxis response regulator protein-gluta... 60 2e-07
ref|ZP_01139684.1| Response regulator receiver:CheW-like pr... 60 2e-07
gb|AAZ63425.1| PAS [Ralstonia eutropha JMP134] >gi|73537902... 60 2e-07
dbj|BAD51119.1| two-component system sensor histidine kinas... 60 2e-07
emb|CAH09852.1| putative two-component system sensor kinase... 60 2e-07
gb|AAM99031.1| DNA-binding response regulator [Streptococcu... 60 2e-07
gb|ABA44421.1| DNA-binding response regulator [Streptococcu... 60 2e-07
ref|ZP_00669238.1| Response regulator receiver:CheW-like pr... 60 2e-07
ref|NP_901248.1| probable sensory box/GGDEF family protein ... 60 2e-07
ref|ZP_00908285.1| Response regulator receiver:ATP-binding ... 60 2e-07
dbj|BAB74820.1| two-component hybrid sensor and regulator [... 60 2e-07
gb|ABA24376.1| Multi-sensor Hybrid Histidine Kinase [Anabae... 60 2e-07
ref|ZP_00539697.1| Phosphoserine phosphatase [Exiguobacteri... 60 2e-07
gb|AAS95472.1| chemotaxis protein CheV [Desulfovibrio vulga... 60 2e-07
gb|ABA24299.1| Response Regulator Receiver Signal Transduct... 60 2e-07
gb|ABB31631.1| two component, sigma54 specific, transcripti... 60 2e-07
ref|ZP_00581775.1| Response regulator receiver:CheW-like pr... 60 2e-07
gb|ABA21942.1| Two Component Transcriptional Regulator, Lux... 60 2e-07
ref|YP_001993.1| response regulator [Leptospira interrogans... 60 2e-07
gb|AAN48944.1| two-component hybrid sensor and regulator [L... 60 2e-07
ref|NP_912485.1| Putative response regulator 10 [Oryza sati... 60 2e-07
ref|ZP_00561512.1| Response regulator receiver:ATP-binding ... 60 2e-07
ref|ZP_00836035.1| Response regulator receiver:ATP-binding ... 60 2e-07
ref|YP_233600.1| Response regulator receiver:CheW-like prot... 60 2e-07
ref|ZP_00505381.1| Response regulator receiver [Polaromonas... 60 2e-07
gb|EAN28112.1| Response regulator receiver [Magnetococcus s... 60 3e-07
ref|ZP_00665369.1| PAS [Syntrophobacter fumaroxidans MPOB] ... 60 3e-07
ref|ZP_01094091.1| sensory transduction histidine kinase [B... 60 3e-07
ref|ZP_00523946.1| Response regulator receiver [Solibacter ... 60 3e-07
ref|ZP_00552387.1| Helix-turn-helix, Fis-type [Desulfuromon... 60 3e-07
ref|ZP_00679149.1| Response regulator receiver:Metal-depend... 60 3e-07
ref|ZP_00591543.1| Response regulator receiver [Prosthecoch... 60 3e-07
emb|CAD16788.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY... 60 3e-07
gb|AAW88094.1| transcriptional regulator [Vibrio fischeri E... 59 4e-07
ref|ZP_00624483.1| GGDEF [Nitrobacter hamburgensis X14] >gi... 59 4e-07
gb|AAR34692.1| response regulator [Geobacter sulfurreducens... 59 4e-07
emb|CAC49922.1| putative two-component response regulator p... 59 4e-07
ref|ZP_01013657.1| response regulator [Rhodobacterales bact... 59 4e-07
emb|CAI07070.1| type IV pilus response regulator PilH [Azoa... 59 4e-07
ref|ZP_00673365.1| Response regulator receiver [Trichodesmi... 59 4e-07
ref|ZP_01152779.1| Response regulator receiver [Halorhodosp... 59 4e-07
ref|ZP_00533550.1| Response regulator receiver:ATP-binding ... 59 5e-07
ref|ZP_00818151.1| Response regulator receiver:Protein phos... 59 5e-07
ref|ZP_00315526.1| COG0642: Signal transduction histidine k... 59 5e-07
gb|ABA23581.1| Response Regulator Receiver Signal Transduct... 59 5e-07
dbj|BAB73345.1| two-component hybrid sensor and regulator [... 59 5e-07
ref|ZP_00836705.1| Response regulator receiver:CheW-like pr... 59 5e-07
ref|ZP_01047197.1| two component diguanylate cyclase [Nitro... 59 5e-07
dbj|BAB73582.1| two-component hybrid sensor and regulator [... 59 5e-07
emb|CAI86032.1| putative response regulator [Pseudoalteromo... 59 5e-07
ref|ZP_00552501.1| GGDEF [Desulfuromonas acetoxidans DSM 68... 59 5e-07
gb|AAT41921.1| putative chemotaxis protein [Fremyella diplo... 59 5e-07
ref|NP_070302.1| response regulator [Archaeoglobus fulgidus... 59 5e-07
ref|ZP_00783289.1| DNA-binding response regulator [Streptoc... 59 5e-07
gb|EAO24518.1| Response regulator receiver [Syntrophomonas ... 59 5e-07
gb|AAU20772.1| timing of CAB expression 1 protein [Castanea... 59 5e-07
gb|AAF69721.1| F27J15.4 [Arabidopsis thaliana] 59 6e-07
ref|ZP_00831816.1| COG0642: Signal transduction histidine k... 59 6e-07
gb|ABA04693.1| two component diguanylate cyclase [Nitrobact... 59 6e-07
ref|ZP_00054894.1| COG3437: Response regulator containing a... 59 6e-07
dbj|BAB76768.1| two-component response regulator [Nostoc sp... 59 6e-07
ref|ZP_00106945.2| COG2197: Response regulator containing a... 59 6e-07
gb|AAV93353.1| response regulator [Silicibacter pomeroyi DS... 59 6e-07
emb|CAE29628.1| two component sigma-54-dependent transcript... 59 6e-07
gb|AAN46189.1| unknown protein [Synechococcus sp. PCC 7942] 59 6e-07
dbj|BAD80469.1| two-component response regulator [Synechoco... 59 6e-07
ref|YP_400832.1| response regulator receiver domain protein... 59 6e-07
ref|NP_175345.1| ARR19 (ARABIDOPSIS RESPONSE REGULATOR 19);... 59 6e-07
ref|NP_901883.1| probable sensor histidine kinase/response ... 58 8e-07
ref|ZP_00504477.1| Response regulator receiver:ATP-binding ... 58 8e-07
sp|Q9M9B9|ARR19_ARATH Putative two-component response regul... 58 8e-07
gb|AAR30121.1| putative histidine kinase HHK16p [Gibberella... 58 8e-07
ref|ZP_00110174.1| COG0642: Signal transduction histidine k... 58 8e-07
gb|AAO76742.1| two-component system sensor histidine kinase... 58 8e-07
ref|ZP_00664856.1| Helix-turn-helix, Fis-type [Syntrophobac... 58 8e-07
ref|ZP_01128746.1| Response regulator receiver:ATP-binding ... 58 8e-07
ref|ZP_00236130.1| sensory box sensor histidine kinase/resp... 58 8e-07
ref|ZP_00560701.1| Response regulator receiver:ATP-binding ... 58 8e-07
dbj|BAC77081.1| B-type response regulator [Oryza glaberrima] 58 8e-07
ref|YP_477158.1| response regulator [Cyanobacteria bacteriu... 58 8e-07
dbj|BAC07898.1| two-component response regulator [Thermosyn... 58 8e-07
emb|CAI78556.1| CheY-like receiver [uncultured Chloroflexi ... 58 8e-07
ref|ZP_01112216.1| Response regulator receiver domain prote... 58 8e-07
gb|EAR88913.1| Response regulator receiver domain containin... 58 8e-07
gb|AAP07995.1| Two component system histidine kinase [Bacil... 58 1e-06
ref|NP_745551.1| sensor histidine kinase/response regulator... 58 1e-06
gb|ABB23193.1| PAS/PAC sensor hybrid histidine kinase [Pelo... 58 1e-06
ref|ZP_01094265.1| two-component response regulator [Blasto... 58 1e-06
ref|ZP_00898632.1| extracellular solute-binding protein, fa... 58 1e-06
ref|ZP_00741459.1| Two component system histidine kinase [B... 58 1e-06
ref|YP_486029.1| diguanylate cyclase [Rhodopseudomonas palu... 58 1e-06
emb|CAE28573.1| putative diguanylate cyclase (GGDEF) with r... 58 1e-06
ref|ZP_00804865.1| GGDEF [Rhodopseudomonas palustris BisB5]... 58 1e-06
dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana] 58 1e-06
dbj|BAE52243.1| Response regulator containing a CheY-like r... 58 1e-06
ref|ZP_00801183.1| Response regulator receiver:Transcriptio... 58 1e-06
gb|AAO78278.1| two-component system sensor histidine kinase... 58 1e-06
ref|ZP_01152325.1| Response regulator receiver:Protein phos... 58 1e-06
dbj|BAE52682.1| Sensor protein gacS [Magnetospirillum magne... 58 1e-06
gb|ABA20132.1| Response regulator receiver domain protein (... 58 1e-06
ref|NP_718764.1| chemotaxis protein CheY [Shewanella oneide... 58 1e-06
ref|ZP_00836665.1| Response regulator receiver [Shewanella ... 58 1e-06
gb|EAN70179.1| Response regulator receiver [Shewanella deni... 58 1e-06
ref|ZP_01034221.1| phosphate regulon transcriptional regula... 58 1e-06
ref|ZP_01012865.1| Phosphate regulon transcriptional regula... 58 1e-06
gb|AAZ71996.1| response regulator receiver [Methanosarcina ... 58 1e-06
ref|ZP_00316227.1| COG3706: Response regulator containing a... 58 1e-06
emb|CAD37055.1| related to protein histidine kinase [Neuros... 51 1e-06
ref|ZP_00110375.1| COG0643: Chemotaxis protein histidine ki... 57 1e-06
ref|ZP_00527297.1| PAS [Solibacter usitatus Ellin6076] >gi|... 57 1e-06
ref|ZP_00108373.2| COG0642: Signal transduction histidine k... 57 1e-06
ref|ZP_00108282.1| COG0642: Signal transduction histidine k... 57 1e-06
ref|ZP_01127727.1| Chemotaxis protein histidine kinase and ... 57 1e-06
ref|YP_469159.1| two-component response regulator protein [... 57 1e-06
ref|ZP_01124431.1| two component transcriptional regulator,... 57 1e-06
ref|ZP_00560705.1| Response regulator receiver:ATP-binding ... 57 1e-06
ref|YP_465116.1| two component, sigma54 specific, transcrip... 57 1e-06
ref|ZP_00512881.1| PAS [Chlorobium limicola DSM 245] >gi|67... 57 1e-06
ref|YP_501975.1| CheA signal transduction histidine kinases... 57 1e-06
emb|CAI85891.1| chemotaxis protein cheY [Pseudoalteromonas ... 57 1e-06
ref|ZP_00111300.1| COG0784: FOG: CheY-like receiver [Nostoc... 57 1e-06
ref|ZP_00865214.1| Response regulator receiver [Alkalilimni... 57 1e-06
ref|ZP_00585380.1| Response regulator receiver [Shewanella ... 57 1e-06
ref|ZP_01116299.1| chemotaxis protein CheY [Reinekea sp. ME... 57 1e-06
dbj|BAC91063.1| two-component hybrid sensor and regulator [... 57 1e-06
ref|YP_472882.1| probable two-component sensor histidine ki... 57 2e-06
ref|ZP_00514875.1| Response regulator receiver:Transcriptio... 57 2e-06
ref|ZP_00109921.1| COG0642: Signal transduction histidine k... 57 2e-06
ref|NP_901249.1| probable two-component hybrid sensor and r... 57 2e-06
emb|CAC46578.1| PUTATIVE TWO 2-COMPONENT RECEIVER DOMAINS P... 57 2e-06
dbj|BAC49553.1| two-component response regulator [Bradyrhiz... 57 2e-06
gb|ABA05016.1| response regulator receiver [Nitrobacter win... 57 2e-06
ref|NP_902182.1| chemotaxis protein CheY [Chromobacterium v... 57 2e-06
gb|AAN78986.1| Phosphate regulon transcriptional Regulatory... 57 2e-06
dbj|BAD78874.1| two-component response regulator CheY subfa... 57 2e-06
ref|NP_791803.1| chemotaxis protein CheY [Pseudomonas syrin... 57 2e-06
gb|AAZ35591.1| chemotaxis protein CheY [Pseudomonas syringa... 57 2e-06
ref|YP_502455.1| response regulator receiver sensor signal ... 57 2e-06
ref|ZP_01110512.1| chemotaxis protein CheY [Alteromonas mac... 57 2e-06
ref|ZP_01043339.1| Chemotaxis protein CheY [Idiomarina balt... 57 2e-06
gb|ABC21469.1| Response regulator receiver domain protein (... 57 2e-06
gb|AAU19345.1| sensor histidine kinase [Bacillus cereus E33... 57 2e-06
ref|ZP_00236008.1| sensor histidine kinase/response regulat... 57 2e-06
gb|ABC23025.1| Two component Transcriptional regulator, Win... 57 2e-06
ref|ZP_01074274.1| serine/threonine kinase with two-compone... 57 2e-06
ref|ZP_00791591.1| COG0642: Signal transduction histidine k... 57 2e-06
ref|ZP_00595420.1| Response regulator receiver:CheW-like pr... 57 2e-06
dbj|BAD66521.1| conserved hypothetical protein [Bacillus cl... 57 2e-06
ref|ZP_00803831.1| Helix-turn-helix, Fis-type [Rhodopseudom... 57 2e-06
ref|ZP_01061102.1| response regulator [Flavobacterium sp. M... 57 2e-06
ref|ZP_00677779.1| Response regulator receiver:CheW-like pr... 57 2e-06
gb|EAN06035.1| GGDEF [Mesorhizobium sp. BNC1] >gi|69277502|... 57 2e-06
gb|AAZ28790.1| response regulator/GGDEF domain protein [Col... 57 2e-06
gb|AAS61896.1| putative Histidine protein kinase sensor [Ye... 57 2e-06
ref|ZP_00796391.1| COG0642: Signal transduction histidine k... 57 2e-06
ref|ZP_01076371.1| putative two-component response regulato... 57 2e-06
ref|ZP_01115970.1| chemotaxis protein CheV [Reinekea sp. ME... 57 2e-06
gb|AAN49727.1| probable two-component response regulator wi... 57 2e-06
gb|AAC82662.1| RcsC [Proteus mirabilis] 57 2e-06
gb|AAZ44991.1| Response regulator receiver:ATP-binding regi... 57 2e-06
ref|ZP_00591868.1| Helix-turn-helix, Fis-type [Prosthecochl... 57 2e-06
gb|ABC23130.1| Response regulator receiver domain protein (... 57 2e-06
emb|CAA21378.1| yp35' [Yersinia pestis] >gi|89102395|ref|ZP... 57 2e-06
ref|ZP_00620066.1| Response regulator receiver:Transcriptio... 57 2e-06
gb|ABA88025.1| response regulator receiver domain protein (... 57 2e-06
ref|YP_309387.1| positive response regulator for pho regulo... 57 2e-06
ref|ZP_01155311.1| hypothetical protein OG2516_05418 [Ocean... 57 2e-06
ref|ZP_00813386.1| Response regulator receiver [Shewanella ... 57 2e-06
ref|ZP_01132732.1| chemotaxis protein cheY [Pseudoalteromon... 57 2e-06
ref|ZP_00774481.1| Response regulator receiver [Pseudoalter... 57 2e-06
ref|ZP_00637612.1| Response regulator receiver [Shewanella ... 57 2e-06
dbj|BAB50602.1| Hybrid sensory histidine kinase [Mesorhizob... 57 2e-06
gb|AAM85945.1| putative Histidine protein kinase sensor [Ye... 57 2e-06
gb|AAQ16277.2| chlamyopsin-5 [Chlamydomonas reinhardtii] 57 2e-06
gb|AAZ33219.1| response regulator [Pseudomonas syringae pv.... 57 2e-06
ref|ZP_00957862.1| stalked-cell differentiation controlling... 56 3e-06
gb|AAT62380.1| sensor histidine kinase [Bacillus thuringien... 56 3e-06
ref|ZP_00857792.1| Response regulator receiver [Bradyrhizob... 56 3e-06
emb|CAE27874.1| response regulator receiver (CheY-like prot... 56 3e-06
dbj|BAA17026.1| CheY subfamily [Synechocystis sp. PCC 6803]... 56 3e-06
gb|EAN30058.1| Response regulator receiver:ATP-binding regi... 56 3e-06
ref|ZP_01140852.1| Response regulator receiver [Geobacter u... 56 3e-06
ref|ZP_00779816.1| GGDEF [Thermoanaerobacter ethanolicus AT... 56 3e-06
emb|CAE29809.1| two-component transcriptional regulator, wi... 56 3e-06
ref|ZP_00503636.1| Response regulator receiver:GAF:ATP-bind... 56 3e-06
ref|ZP_00807544.1| Response regulator receiver:Transcriptio... 56 3e-06
ref|ZP_00767809.1| HDIG [Chloroflexus aurantiacus J-10-fl] ... 56 3e-06
gb|AAZ35414.1| sensor histidine kinase/response regulator [... 56 3e-06
ref|YP_505143.1| response regulator/GGDEF domain protein [A... 56 3e-06
ref|ZP_01047062.1| helix-turn-helix, Fis-type protein [Nitr... 56 3e-06
ref|ZP_01142270.1| Response regulator receiver [Geobacter u... 56 3e-06
dbj|BAC97498.1| sensory box sensor histidine kinase/respons... 56 3e-06
dbj|BAB75619.1| two-component response regulator [Nostoc sp... 56 3e-06
gb|AAD28578.1| putative response regulator CelR2 [Rhizobium... 56 3e-06
gb|AAB71131.1| sensor protein RssA [Riftia pachyptila endos... 56 3e-06
ref|YP_431871.1| Chemotaxis protein histidine kinase and re... 56 3e-06
gb|AAS94540.1| chemotaxis protein CheV [Desulfovibrio vulga... 56 3e-06
dbj|BAA17885.1| hybrid sensory kinase [Synechocystis sp. PC... 56 3e-06
ref|ZP_00396737.1| Response regulator receiver [Deinococcus... 56 3e-06
emb|CAB46638.1| transcriptional regulatory gene 1 [Heterosi... 56 3e-06
ref|ZP_00640425.1| PAS [Shewanella frigidimarina NCIMB 400]... 56 3e-06
gb|ABB33681.1| response regulator receiver domain protein (... 56 3e-06
gb|ABA23222.1| Response Regulator Receiver Signal Transduct... 56 3e-06
ref|ZP_00808850.1| Response regulator receiver [Rhodopseudo... 56 3e-06
emb|CAA56927.1| phoB [Shigella flexneri] 56 3e-06
dbj|BAB50087.1| two-component response regulator [Mesorhizo... 56 3e-06
dbj|BAE76179.1| DNA-binding response regulator in two-compo... 56 3e-06
ref|YP_402044.1| positive response regulator for pho regulo... 56 3e-06
gb|AAN41994.1| positive response regulator for pho regulon ... 56 3e-06
gb|ABA21770.1| Response Regulator Receiver Signal Transduct... 56 3e-06
emb|CAA43549.1| CheY [Pseudomonas aeruginosa] >gi|9947408|g... 56 3e-06
ref|YP_236506.1| Response regulator receiver [Pseudomonas s... 56 3e-06
gb|AAT49695.1| PA1456 [synthetic construct] 56 3e-06
gb|AAZ28242.1| chemotaxis protein CheY [Colwellia psychrery... 56 3e-06
ref|YP_436273.1| FOG: CheY-like receiver [Hahella chejuensi... 56 3e-06
pdb|1ZES|C Chain C, Bef3- Activated Phob Receiver Domain >g... 56 3e-06
ref|ZP_01075363.1| Response regulator receiver domain prote... 56 3e-06
pdb|1B00|B Chain B, Phob Receiver Domain From Escherichia C... 56 3e-06
gb|AAU84398.1| two-component response regulator [uncultured... 56 3e-06
dbj|BAB52129.1| two-component response regulator [Mesorhizo... 56 3e-06
gb|ABB41564.1| two component transcriptional regulator, win... 56 3e-06
ref|ZP_00107058.1| COG0784: FOG: CheY-like receiver [Nostoc... 56 3e-06
ref|NP_794763.1| sensor histidine kinase/response regulator... 56 3e-06
gb|AAO07892.1| FOG: CheY-like receiver [Vibrio vulnificus C... 56 3e-06
gb|ABA20710.1| Multi-sensor Hybrid Histidine Kinase [Anabae... 56 4e-06
gb|AAT30099.1| sensor histidine kinase/response regulator [... 56 4e-06
ref|ZP_00107936.1| COG2197: Response regulator containing a... 56 4e-06
ref|YP_418805.1| GGDEF:Response regulator receiver [Brucell... 56 4e-06
gb|EAN69379.1| GGDEF [Shewanella denitrificans OS217] >gi|6... 56 4e-06
gb|ABA21399.1| Metal dependent phosphohydrolase, HD region ... 56 4e-06
gb|ABB40791.1| response regulator receiver domain protein (... 56 4e-06
ref|ZP_00776641.1| GGDEF [Pseudoalteromonas atlantica T6c] ... 56 4e-06
ref|ZP_00679040.1| Response regulator receiver [Pelobacter ... 56 4e-06
gb|ABA25249.1| Multi-component Transcriptional regulator, W... 56 4e-06
emb|CAI44370.1| response regulator [Thermotoga sp. SG1] 56 4e-06
emb|CAI86697.1| putative sensor protein [Pseudoalteromonas ... 56 4e-06
ref|ZP_01150889.1| Response regulator receiver:ATP-binding ... 56 4e-06
ref|ZP_00153368.1| COG3706: Response regulator containing a... 56 4e-06
ref|ZP_01143160.1| Helix-turn-helix, Fis-type [Geobacter ur... 56 4e-06
ref|ZP_00674614.1| Response regulator receiver:Stage II spo... 56 4e-06
gb|AAN33799.1| response regulator/GGDEF domain protein [Bru... 56 4e-06
ref|ZP_00807330.1| Response regulator receiver [Rhodopseudo... 56 4e-06
ref|NP_746455.1| chemotaxis protein CheY [Pseudomonas putid... 56 4e-06
emb|CAE80452.1| probable sensor/response regulator hybrid [... 56 4e-06
ref|ZP_00525547.1| Response regulator receiver [Solibacter ... 56 4e-06
ref|ZP_00901584.1| Response regulator receiver [Pseudomonas... 56 4e-06
gb|AAD35279.1| response regulator [Thermotoga maritima MSB8... 56 4e-06
ref|ZP_00627489.1| Response regulator receiver [Nitrobacter... 56 4e-06
ref|ZP_00310817.1| COG0784: FOG: CheY-like receiver [Cytoph... 56 4e-06
gb|AAW36097.1| DNA-binding response regulator [Campylobacte... 56 4e-06
ref|YP_237766.1| Response regulator receiver [Pseudomonas s... 56 4e-06
ref|ZP_00106697.1| COG0745: Response regulators consisting ... 56 4e-06
gb|EAR91280.1| ATPase, histidine kinase-, DNA gyrase B-, an... 56 4e-06
gb|AAP77269.1| chemotaxis protein histidine kinase CheA [He... 56 4e-06
gb|AAL02859.1| regulatory components of sensory transductio... 55 5e-06
dbj|BAB75463.1| two-component hybrid sensor and regulator [... 55 5e-06
ref|ZP_00570561.1| Response regulator receiver:GAF:ATP-bind... 55 5e-06
ref|ZP_00859462.1| Response regulator receiver [Bradyrhizob... 55 5e-06
ref|ZP_01113338.1| hypothetical protein MED297_11380 [Reine... 55 5e-06
emb|CAD85161.1| two-component hybrid sensor and regulator [... 55 5e-06
ref|NP_180275.1| ARR13 (ARABIDOPSIS RESPONSE REGULATOR 13);... 55 5e-06
ref|ZP_00672546.1| Guanylate cyclase:Response regulator rec... 55 5e-06
gb|AAR30107.1| putative histidine kinase M2QJp [Botryotinia... 55 5e-06
ref|ZP_00368202.1| transcriptional regulatory protein KdpE,... 55 5e-06
dbj|BAB77008.1| two-component hybrid sensor and regulator [... 55 5e-06
ref|NP_794571.1| response regulator [Pseudomonas syringae p... 55 5e-06
emb|CAI44394.1| response regulator [Thermotoga sp. KOL6] 55 5e-06
ref|ZP_00660842.1| PAS [Prosthecochloris vibrioformis DSM 2... 55 5e-06
dbj|BAC52395.1| two-component response regulator [Bradyrhiz... 55 5e-06
emb|CAE28441.1| two-component osmotic transcriptional regul... 55 5e-06
ref|ZP_00765998.1| PAS:Adenylyl cyclase class-3/4/guanylyl ... 55 5e-06
ref|ZP_01099723.1| DNA-binding response regulator [Campylob... 55 5e-06
gb|AAY96082.1| response regulator/GGDEF domain protein [Pse... 55 5e-06
ref|ZP_00208525.1| COG0643: Chemotaxis protein histidine ki... 55 5e-06
dbj|BAB73043.1| two-component response regulator [Nostoc sp... 55 5e-06
dbj|BAC52726.1| two-component response regulator [Bradyrhiz... 55 5e-06
gb|ABA72367.1| Putative diguanylate cyclase (GGDEF domain) ... 55 5e-06
ref|ZP_00809465.1| Helix-turn-helix, Fis-type [Rhodopseudom... 55 5e-06
emb|CAH21160.1| possible two-component sensor [Yersinia pse... 55 5e-06
gb|AAV95229.1| phosphate regulon transcriptional regulatory... 55 5e-06
ref|ZP_00317173.1| COG0784: FOG: CheY-like receiver [Microb... 55 5e-06
gb|AAF67045.1| response regulator CheY [Pseudomonas putida]... 55 5e-06
gb|AAF96988.1| chemotaxis protein CheY [Vibrio cholerae O1 ... 55 5e-06
ref|ZP_00761098.1| COG0784: FOG: CheY-like receiver [Vibrio... 55 5e-06
gb|EAN27825.1| Response regulator receiver:GAF:ATP-binding ... 55 5e-06
ref|ZP_00818168.1| Response regulator receiver [Marinobacte... 55 5e-06
ref|ZP_00679477.1| Response regulator receiver [Pelobacter ... 55 5e-06
ref|ZP_00632830.1| Response regulator receiver:Transcriptio... 55 5e-06
sp|Q9ZVD3|ARR13_ARATH Putative two-component response regul... 55 5e-06
dbj|BAB76579.1| two-component hybrid sensor and regulator [... 55 5e-06
emb|CAE26691.1| two-component transcriptional regulator, Lu... 55 5e-06
emb|CAB73913.1| putative two-component regulator [Campyloba... 55 5e-06
gb|AAF12221.1| response regulator [Deinococcus radiodurans ... 55 5e-06
gb|AAY48257.1| PilL protein [Xanthomonas campestris pv. cam... 55 7e-06
gb|AAM42193.1| PilL protein [Xanthomonas campestris pv. cam... 55 7e-06
gb|ABA21185.1| Response Regulator Receiver Signal Transduct... 55 7e-06
ref|ZP_00679596.1| Response regulator receiver:ATP-binding ... 55 7e-06
ref|ZP_01185792.1| Response regulator receiver:GAF:ATP-bind... 55 7e-06
gb|ABA23234.1| Two Component Transcriptional Regulator, Lux... 55 7e-06
ref|ZP_00395434.1| PAS [Deinococcus geothermalis DSM 11300]... 55 7e-06
gb|ABB41344.1| response regulator receiver domain protein (... 55 7e-06
ref|ZP_00806888.1| Response regulator receiver [Rhodopseudo... 55 7e-06
gb|EAN29629.1| PAS [Magnetococcus sp. MC-1] >gi|69256423|re... 55 7e-06
ref|ZP_01134856.1| putative sensory box histidine kinase/re... 55 7e-06
dbj|BAB75370.1| two-component hybrid sensor and regulator [... 55 7e-06
ref|YP_316306.1| CheA Signal Transduction Histidine Kinases... 55 7e-06
ref|ZP_00845349.1| Helix-turn-helix, Fis-type [Rhodopseudom... 55 7e-06
ref|ZP_00585421.1| Response regulator receiver:CheW-like pr... 55 7e-06
gb|ABB31322.1| two component, sigma54 specific, transcripti... 55 7e-06
dbj|BAC97499.1| response regulator [Vibrio vulnificus YJ016... 55 7e-06
>dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 437 bits (1123), Expect = e-121
Identities = 221/228 (96%), Positives = 221/228 (96%)
Frame = +1
Query: 142 TXXXXXXXTAPILPCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ 321
T TAPILPCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ
Sbjct: 8 TSSSLSSSTAPILPCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ 67
Query: 322 VTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLK 501
VTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLK
Sbjct: 68 VTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLK 127
Query: 502 KIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQ 681
KIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQ
Sbjct: 128 KIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQ 187
Query: 682 EQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQLANRSRHS 825
EQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQLANRSRHS
Sbjct: 188 EQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQLANRSRHS 235
Score = 105 bits (263), Expect = 3e-21
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLL+
Sbjct: 78 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLK 127
>dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa (japonica
cultivar-group)]
Length = 201
Score = 276 bits (706), Expect = 1e-72
Identities = 156/208 (75%), Positives = 166/208 (79%), Gaps = 7/208 (3%)
Frame = +1
Query: 223 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 402
AVA E PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKAL+FLGLHD + + P+
Sbjct: 2 AVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDS--PIS 59
Query: 403 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
T + Q+V VNLIITDYCMPGMTGYDLLKKIKESS LRDIPVVIMSS+NIPSRINR
Sbjct: 60 TQ----SDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 115
Query: 583 CLEEGADEFFLKPVRLSDMNKLKPHILKSRC----NQEQHQQSDSHSGERRNPT---ISS 741
CLEEGADEFFLKPVRLSDM+KLKPHILKSRC QEQH QS+S S NPT SS
Sbjct: 116 CLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSSNPTSENSSS 175
Query: 742 SDSINNRKRKGAGTEEILPQLANRSRHS 825
S S N+ KRK A EEILP R RHS
Sbjct: 176 STSTNSHKRK-AVDEEILPHTI-RPRHS 201
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGLHD + + P+ T + Q+V VNLIITDYCMPGMTGYDLL+
Sbjct: 45 LEFLGLHDHEDS--PISTQ----SDQQEVGVNLIITDYCMPGMTGYDLLK 88
>emb|CAI79413.1| Type A response regulator 9 [Oryza sativa (indica cultivar-group)]
dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa (japonica cultivar-group)]
gb|ABA91414.1| response regulator 6 [Oryza sativa (japonica cultivar-group)]
Length = 201
Score = 275 bits (702), Expect = 4e-72
Identities = 156/208 (75%), Positives = 167/208 (80%), Gaps = 7/208 (3%)
Frame = +1
Query: 223 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 402
AVA E PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKAL+FLGLHD + + P+
Sbjct: 2 AVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDS--PIS 59
Query: 403 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
T + Q+VAVNLIITDYCMPGMTGYDLLKKIKESS LRDIPVVIMSS+NIPSRINR
Sbjct: 60 TQ----SDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 115
Query: 583 CLEEGADEFFLKPVRLSDMNKLKPHILKSRC----NQEQHQQSDSHSGERRNPT---ISS 741
CLEEGADEFFLKPVRLSDM+KLKPHILKSRC QEQ+ QS+S S NPT SS
Sbjct: 116 CLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTSENSSS 175
Query: 742 SDSINNRKRKGAGTEEILPQLANRSRHS 825
S S N+ KRK A EEILP R RHS
Sbjct: 176 STSSNSHKRK-AVDEEILPHTI-RPRHS 201
Score = 61.6 bits (148), Expect = 7e-08
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGLHD + + P+ T + Q+VAVNLIITDYCMPGMTGYDLL+
Sbjct: 45 LEFLGLHDHEDS--PISTQ----SDQQEVAVNLIITDYCMPGMTGYDLLK 88
>gb|ABA91415.1| response regulator 6 [Oryza sativa (japonica cultivar-group)]
Length = 208
Score = 268 bits (684), Expect = 5e-70
Identities = 156/215 (72%), Positives = 167/215 (77%), Gaps = 14/215 (6%)
Frame = +1
Query: 223 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ-------VTTVDSGSKALQFLGLHDQD 381
AVA E PFHVLAVDDSLPDRKLIERLLKTSSFQ VTTVDSGSKAL+FLGLHD +
Sbjct: 2 AVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHE 61
Query: 382 STVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSEN 561
+ P+ T + Q+VAVNLIITDYCMPGMTGYDLLKKIKESS LRDIPVVIMSS+N
Sbjct: 62 DS--PISTQ----SDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDN 115
Query: 562 IPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRC----NQEQHQQSDSHSGERRNP 729
IPSRINRCLEEGADEFFLKPVRLSDM+KLKPHILKSRC QEQ+ QS+S S NP
Sbjct: 116 IPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNP 175
Query: 730 T---ISSSDSINNRKRKGAGTEEILPQLANRSRHS 825
T SSS S N+ KRK A EEILP R RHS
Sbjct: 176 TSENSSSSTSSNSHKRK-AVDEEILPHTI-RPRHS 208
Score = 61.6 bits (148), Expect = 7e-08
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGLHD + + P+ T + Q+VAVNLIITDYCMPGMTGYDLL+
Sbjct: 52 LEFLGLHDHEDS--PISTQ----SDQQEVAVNLIITDYCMPGMTGYDLLK 95
>ref|NP_191263.1| ARR9 (RESPONSE REACTOR 4); transcription regulator [Arabidopsis
thaliana]
emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
sp|O80366|ARR9_ARATH Two-component response regulator ARR9 (Response reactor 4)
Length = 234
Score = 210 bits (534), Expect = 1e-52
Identities = 108/162 (66%), Positives = 133/162 (82%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHT 405
+A E+ FHVLAVDDSL DRKLIERLL+ SS QVTTVDSGSKAL+FLGL + P
Sbjct: 3 MAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAF 62
Query: 406 HQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
+ V +Q V VNLIITDYCMPGMTGYDLLKK+KESS+ RDIPVVIMSSEN+P+RI+RC
Sbjct: 63 SKAPVN-HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRC 121
Query: 586 LEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHS 711
LEEGA+EFFLKPVRL+D+NKLKPH++K++ ++ ++ ++ S
Sbjct: 122 LEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTS 163
Score = 51.2 bits (121), Expect = 1e-04
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL + P + V +Q V VNLIITDYCMPGMTGYDLL+
Sbjct: 45 LEFLGLRQSTDSNDPNAFSKAPVN-HQVVEVNLIITDYCMPGMTGYDLLK 93
>dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 207 bits (526), Expect = 1e-51
Identities = 118/212 (55%), Positives = 139/212 (65%), Gaps = 21/212 (9%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M E+ FHVLAVDDSL DRKLIE LLKTSS+QVTTVDSGSKAL+ LGL D S P
Sbjct: 1 MTVPDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPS 60
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
HQ ++ VNLIITDYCMPGMTGYDLLK++K SSSL+DIPVVIMSSEN+P+RI
Sbjct: 61 SPDHQ-------EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 113
Query: 577 NRCLEEGADEFFLKPVRLSDMNKLKPHILKSR------------CNQEQHQQSD-----S 705
+RCL++GA+EFFLKPV+L+DM KLK H+LK + E QQ D +
Sbjct: 114 SRCLQDGAEEFFLKPVKLADMKKLKSHLLKRKQPKEAQAQQGQAVELEPEQQLDPRAQPA 173
Query: 706 HSGERR----NPTISSSDSINNRKRKGAGTEE 789
H E P S+ + KRK A EE
Sbjct: 174 HDAEETAAEPPPAASNGTADGGNKRKAAAMEE 205
Score = 54.7 bits (130), Expect = 9e-06
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+ LGL D S P HQ ++ VNLIITDYCMPGMTGYDLL+
Sbjct: 46 LELLGLRDASSPSPSSPDHQ-------EIDVNLIITDYCMPGMTGYDLLK 88
>ref|NP_181663.1| ATRR3 (RESPONSE REGULATOR 3); transcription regulator [Arabidopsis
thaliana]
gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
sp|O80365|ARR8_ARATH Two-component response regulator ARR8 (Response reactor 3)
Length = 225
Score = 206 bits (523), Expect = 2e-51
Identities = 105/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQD------STVP 393
TE+ FHVLAVDDSL DRK+IERLL+ SS QVTTVDSGSKAL+FLGL D ST P
Sbjct: 5 TESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSP 64
Query: 394 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 573
+H Q+V +NLIITDYCMPGMTGYDLLKK+KES++ R IPVVIMSSEN+P+R
Sbjct: 65 QIH---------QEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPAR 115
Query: 574 INRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQ 693
I+RCLEEGA+EFFLKPV+L+D+ KLKPH++K++ +E +
Sbjct: 116 ISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEK 155
Score = 54.7 bits (130), Expect = 9e-06
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Frame = +3
Query: 3 LQFLGLHDQD------STVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL D ST P +H Q+V +NLIITDYCMPGMTGYDLL+
Sbjct: 45 LEFLGLRVDDNDPNALSTSPQIH---------QEVEINLIITDYCMPGMTGYDLLK 91
>ref|NP_914660.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
emb|CAI79408.1| Type A response regulator 4 [Oryza sativa (indica cultivar-group)]
dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa (japonica cultivar-group)]
dbj|BAB64697.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 232
Score = 204 bits (519), Expect = 7e-51
Identities = 106/154 (68%), Positives = 126/154 (81%), Gaps = 2/154 (1%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ--DSTV 390
M V E+ FHVLAVDDSL DRKLIE LLK SS+QVTTVDSGSKAL+ LGL D+ DS+
Sbjct: 1 MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60
Query: 391 PPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPS 570
P + +Q++ VNLIITDYCMPGMTGYDLLK++K SSSL+DIPVVIMSSEN+P+
Sbjct: 61 SPSSSSP----DHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPA 116
Query: 571 RINRCLEEGADEFFLKPVRLSDMNKLKPHILKSR 672
RINRCLE+GA+EFFLKPV+L+DM KLK H+LK +
Sbjct: 117 RINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150
Score = 52.0 bits (123), Expect = 6e-05
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 LQFLGLHDQ--DSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+ LGL D+ DS+ P + +Q++ VNLIITDYCMPGMTGYDLL+
Sbjct: 46 LELLGLRDEGDDSSSSPSSSSP----DHQEIDVNLIITDYCMPGMTGYDLLK 93
>gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 200 bits (508), Expect = 1e-49
Identities = 114/189 (60%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
MAA + FHVLAVDDSL DRKLIERLLKTS++QVT VDSG KAL+FLGL D++ +
Sbjct: 1 MAAQVLDVGFHVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISG 60
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
+ Q+ V VNLIITDY MPGMTGYDLL+K+KESS L+DIPVVIMSSENIPSRI
Sbjct: 61 SNHQQV-------VEVNLIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRI 113
Query: 577 NRCLEEGADEFFLKPVRLSDMNKLKPHILKSRC-----NQEQHQQSDSHSGERRNPTISS 741
NRCLEEGAD+FFLKPV+ SD+NKL P + S N EQ Q S + +R+ T
Sbjct: 114 NRCLEEGADDFFLKPVKQSDVNKLIPLVPNSFTGKPIKNHEQQQIFSSSTCKRKQHTDEY 173
Query: 742 SDSINNRKR 768
RKR
Sbjct: 174 LSPTLRRKR 182
Score = 48.9 bits (115), Expect = 5e-04
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL D++ + + Q+ V VNLIITDY MPGMTGYDLL+
Sbjct: 46 LEFLGLLDEEKEISGSNHQQV-------VEVNLIITDYSMPGMTGYDLLR 88
>dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 195 bits (495), Expect = 4e-48
Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 18/209 (8%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ--DSTV 390
M + E+ FHVLAVDDS+ DRKLIE LLK+SS+QVTTV+SG+KAL+ LGL D +
Sbjct: 1 MTVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDAS 60
Query: 391 PPVHTHQLDVAAN---QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSEN 561
PP + +++ Q++ V+LIITDYCMPGMTGYDLLK++K SSSL+DIPVVIMSSEN
Sbjct: 61 PPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSEN 120
Query: 562 IPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQH-----------QQSDSH 708
+P+RI+RCL++GA+EFFLKPV+ +DM KLK H+LK + ++++ QQ D H
Sbjct: 121 VPARISRCLQDGAEEFFLKPVKPADMKKLKSHLLKRKQPKQKNKPQAQAVESPEQQLDPH 180
Query: 709 SGERRNPTISSSDSINN--RKRKGAGTEE 789
+ + + N KRK A EE
Sbjct: 181 PQPVHELELEEAAADRNGVNKRKAAAMEE 209
Score = 49.7 bits (117), Expect = 3e-04
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Frame = +3
Query: 3 LQFLGLHDQ--DSTVPPVHTHQLDVAAN---QDVAVNLIITDYCMPGMTGYDLLQ 152
L+ LGL D + PP + +++ Q++ V+LIITDYCMPGMTGYDLL+
Sbjct: 46 LELLGLRDNGAEDASPPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLK 100
>gb|ABA96406.1| response regulator-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 115
Score = 183 bits (465), Expect = 1e-44
Identities = 97/120 (80%), Positives = 104/120 (86%)
Frame = +1
Query: 223 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 402
AVA E PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKAL+FLGLHD + + P+
Sbjct: 2 AVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDS--PIS 59
Query: 403 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
T + Q+V VNLIITDYCMPGMTGYDLLKKIKESS LRDIPVVIMSS+NIPSRINR
Sbjct: 60 TQ----SDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 115
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGLHD + + P+ T + Q+V VNLIITDYCMPGMTGYDLL+
Sbjct: 45 LEFLGLHDHEDS--PISTQ----SDQQEVGVNLIITDYCMPGMTGYDLLK 88
>ref|NP_201097.1| ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component
response regulator [Arabidopsis thaliana]
gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6
dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
Length = 186
Score = 164 bits (416), Expect = 6e-39
Identities = 85/142 (59%), Positives = 109/142 (76%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P HVLAVDDS DRK IERLL+ SS +VT VDS ++ALQ+LGL ++ +V
Sbjct: 24 PLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSV---------- 73
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
+D+ VNLI+TDY MPGMTGY+LLKKIKESS+ R++PVVIMSSENI RI+RCLEEGA
Sbjct: 74 -GFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGA 132
Query: 601 DEFFLKPVRLSDMNKLKPHILK 666
++F LKPV+LSD+ +L+ ++K
Sbjct: 133 EDFLLKPVKLSDVKRLRDSLMK 154
Score = 43.9 bits (102), Expect = 0.015
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL ++ +V +D+ VNLI+TDY MPGMTGY+LL+
Sbjct: 61 LQYLGLDVEEKSV-----------GFEDLKVNLIMTDYSMPGMTGYELLK 99
>gb|AAK14395.1| response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 164 bits (416), Expect = 6e-39
Identities = 89/167 (53%), Positives = 117/167 (70%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDSL DRK+IERLLKT+S +VT VDSG +AL+FLGL + T +
Sbjct: 36 HVLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGLDAEQRT-----------SV 84
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ ++LIITDYCMPGMTGY+LLKKIKESS+ ++ PVVIMSSEN+ +RI+RCLEEGA++
Sbjct: 85 VDGLKIDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAED 144
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSD 747
F LKPV+LSD+ +L+ ++ N+ S SG + + SD
Sbjct: 145 FILKPVKLSDVKRLRDYM----TNKYDKSNSRVISGTNKRKQMDGSD 187
Score = 42.7 bits (99), Expect = 0.034
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL + T + + ++LIITDYCMPGMTGY+LL+
Sbjct: 71 LEFLGLDAEQRT-----------SVVDGLKIDLIITDYCMPGMTGYELLK 109
>ref|NP_567037.1| ARR17; transcription regulator/ two-component response regulator
[Arabidopsis thaliana]
gb|AAG40613.1| response regulator 17 [Arabidopsis thaliana]
sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17
Length = 153
Score = 164 bits (415), Expect = 8e-39
Identities = 85/146 (58%), Positives = 109/146 (74%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
E HVLAVDD+L DRKL+ER+LK SS +VTT ++G +AL++LGL D T
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQT--------- 67
Query: 415 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
D N + VNLIITDYCMPGMTG++LLKK+KESS+L+++PVVI+SSENIP+RIN+CL
Sbjct: 68 DSLTNV-MKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLAS 126
Query: 595 GADEFFLKPVRLSDMNKLKPHILKSR 672
GA F KP++LSD+ KLK H+L R
Sbjct: 127 GAQMFMQKPLKLSDVEKLKCHLLNCR 152
Score = 44.3 bits (103), Expect = 0.012
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L++LGL D T D N + VNLIITDYCMPGMTG++LL+
Sbjct: 56 LEYLGLGDPQQT---------DSLTNV-MKVNLIITDYCMPGMTGFELLK 95
>gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 164 bits (414), Expect = 1e-38
Identities = 87/140 (62%), Positives = 108/140 (77%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDSL DRK+IERLLK S +VT V+SG +ALQ+LGL + STV
Sbjct: 15 HVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTV-----------G 63
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ VNLI+TDY MPGMTGY+LLKKIK SS+L++IPVVIMSSENI +RI+RCLEEGA+E
Sbjct: 64 FDGLKVNLILTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEE 123
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F +KPV+LSD+ ++K +LK
Sbjct: 124 FLVKPVKLSDVKRIKDFVLK 143
Score = 43.5 bits (101), Expect = 0.020
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL + STV + VNLI+TDY MPGMTGY+LL+
Sbjct: 50 LQYLGLDGEKSTV-----------GFDGLKVNLILTDYSMPGMTGYELLK 88
>ref|NP_177627.1| ARR15 (RESPONSE REGULATOR 15); transcription regulator [Arabidopsis
thaliana]
gb|AAG51914.1| putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gb|AAG40611.1| response regulator 15 [Arabidopsis thaliana]
gb|AAD55287.1| Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15
Length = 206
Score = 163 bits (412), Expect = 2e-38
Identities = 91/177 (51%), Positives = 123/177 (69%), Gaps = 9/177 (5%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS DRK+IERLLK S+ +VTTV+SG++ALQ+LGL + + +
Sbjct: 19 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGS-----------SG 67
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+D+ VNLI+TDY MPG+TGY+LLKKIKESS+LR+IPVVIMSSENI RI +C+ EGA+E
Sbjct: 68 LKDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEE 127
Query: 607 FFLKPVRLSDMNKLKPHILK---------SRCNQEQHQQSDSHSGERRNPTISSSDS 750
F LKPV+L+D+ +LK I++ + + ++ Q+D S + T SSS S
Sbjct: 128 FLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSSS 184
Score = 41.6 bits (96), Expect = 0.077
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL + + + +D+ VNLI+TDY MPG+TGY+LL+
Sbjct: 54 LQYLGLDGDNGS-----------SGLKDLKVNLIVTDYSMPGLTGYELLK 92
>ref|NP_173339.1| ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component
response regulator [Arabidopsis thaliana]
gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gb|AAF79300.1| F14D16.20 [Arabidopsis thaliana]
sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7
dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
Length = 206
Score = 163 bits (412), Expect = 2e-38
Identities = 91/174 (52%), Positives = 123/174 (70%), Gaps = 1/174 (0%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
T HVLAVDDS+ DRK+IERLL+ SS +VTTV+SG++ALQ+LGL
Sbjct: 20 TTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKG--------- 70
Query: 412 LDVAAN-QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCL 588
A+N +D+ VNLI+TDY MPG++GYDLLKKIKESS+ R++PVVIMSSENI RI CL
Sbjct: 71 ---ASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECL 127
Query: 589 EEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDS 750
+EGA+EF LKPV+L+D+ ++K I++ N+ + + SHS +R+ S + S
Sbjct: 128 KEGAEEFLLKPVKLADVKRIKQLIMR---NEAEECKILSHSNKRKLQEDSDTSS 178
Score = 40.8 bits (94), Expect = 0.13
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +3
Query: 81 QDVAVNLIITDYCMPGMTGYDLLQ 152
+D+ VNLI+TDY MPG++GYDLL+
Sbjct: 75 KDLKVNLIVTDYSMPGLSGYDLLK 98
>gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 163 bits (412), Expect = 2e-38
Identities = 83/150 (55%), Positives = 115/150 (76%)
Frame = +1
Query: 220 AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPV 399
+++A+ HVLAVDDS+ DRK IERLL+ SS +VT VDS ++ALQ+LGL ++++
Sbjct: 17 SSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSS--- 73
Query: 400 HTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRIN 579
+D+ +NLI+TDY MPGMTGY+LLKKIKESS+ R+IPVVIMSSENI RI+
Sbjct: 74 -------VGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRID 126
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKS 669
RCLEEGA++F LKPV+L+D+ +L+ ++K+
Sbjct: 127 RCLEEGAEDFLLKPVKLADVKRLRDSLMKA 156
Score = 42.4 bits (98), Expect = 0.045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL ++++ +D+ +NLI+TDY MPGMTGY+LL+
Sbjct: 61 LQYLGLDGENNSS----------VGFEDLKINLIMTDYSMPGMTGYELLK 100
>ref|NP_190393.1| ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator [Arabidopsis thaliana]
emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 (Response reactor 2)
Length = 184
Score = 163 bits (412), Expect = 2e-38
Identities = 83/150 (55%), Positives = 115/150 (76%)
Frame = +1
Query: 220 AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPV 399
+++A+ HVLAVDDS+ DRK IERLL+ SS +VT VDS ++ALQ+LGL ++++
Sbjct: 17 SSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSS--- 73
Query: 400 HTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRIN 579
+D+ +NLI+TDY MPGMTGY+LLKKIKESS+ R+IPVVIMSSENI RI+
Sbjct: 74 -------VGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRID 126
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKS 669
RCLEEGA++F LKPV+L+D+ +L+ ++K+
Sbjct: 127 RCLEEGAEDFLLKPVKLADVKRLRDSLMKA 156
Score = 42.4 bits (98), Expect = 0.045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL ++++ +D+ +NLI+TDY MPGMTGY+LL+
Sbjct: 61 LQYLGLDGENNSS----------VGFEDLKINLIMTDYSMPGMTGYELLK 100
>dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 163 bits (412), Expect = 2e-38
Identities = 83/150 (55%), Positives = 115/150 (76%)
Frame = +1
Query: 220 AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPV 399
+++A+ HVLAVDDS+ DRK IERLL+ SS +VT VDS ++ALQ+LGL ++++
Sbjct: 17 SSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSS--- 73
Query: 400 HTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRIN 579
+D+ +NLI+TDY MPGMTGY+LLKKIKESS+ R+IPVVIMSSENI RI+
Sbjct: 74 -------VGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRID 126
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKS 669
RCLEEGA++F LKPV+L+D+ +L+ ++K+
Sbjct: 127 RCLEEGAEDFLLKPVKLADVKRLRDSLMKA 156
Score = 42.4 bits (98), Expect = 0.045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL ++++ +D+ +NLI+TDY MPGMTGY+LL+
Sbjct: 61 LQYLGLDGENNSS----------VGFEDLKINLIMTDYSMPGMTGYELLK 100
>ref|NP_181599.1| ARR16; transcription regulator/ two-component response regulator
[Arabidopsis thaliana]
emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gb|AAG40612.1| response regulator 16 [Arabidopsis thaliana]
gb|AAD32811.1| putative two-component response regulator protein [Arabidopsis
thaliana]
sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16
Length = 164
Score = 161 bits (408), Expect = 5e-38
Identities = 81/142 (57%), Positives = 107/142 (75%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDD+L DRKL+ERLLK S +VTT ++ +AL++LGL DQ+ +D
Sbjct: 30 HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQ--------HIDALT 81
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ V+LIITDYCMPGMTG++LLKK+KESS+LR++PVVIMSSENIP+RIN+CL GA
Sbjct: 82 CNVMKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQM 141
Query: 607 FFLKPVRLSDMNKLKPHILKSR 672
F KP++L+D+ KLK H++ R
Sbjct: 142 FMQKPLKLADVEKLKCHLMNCR 163
Score = 45.8 bits (107), Expect = 0.004
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L++LGL DQ+ +D + V+LIITDYCMPGMTG++LL+
Sbjct: 65 LEYLGLGDQNQ--------HIDALTCNVMKVSLIITDYCMPGMTGFELLK 106
>ref|NP_172517.1| ARR4 (RESPONSE REGULATOR 4); transcription regulator/ two-component
response regulator [Arabidopsis thaliana]
gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gb|AAD39568.1| T10O24.8 [Arabidopsis thaliana]
dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
sp|O82798|ARR4_ARATH Two-component response regulator ARR4 (Response regulator 1)
dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
Length = 259
Score = 161 bits (408), Expect = 5e-38
Identities = 83/140 (59%), Positives = 109/140 (77%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDSL DR +IERLL+ +S +VT VDSG +AL+FLGL ++ ++ A
Sbjct: 35 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKAS-----------AE 83
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ V+LIITDYCMPGMTGY+LLKKIKESS+ R++PVVIMSSEN+ +RI+RCLEEGA +
Sbjct: 84 FDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQD 143
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F LKPV+L+D+ +L+ H+ K
Sbjct: 144 FLLKPVKLADVKRLRSHLTK 163
Score = 43.5 bits (101), Expect = 0.020
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL ++ ++ A + V+LIITDYCMPGMTGY+LL+
Sbjct: 70 LEFLGLDNEKAS-----------AEFDRLKVDLIITDYCMPGMTGYELLK 108
>ref|NP_176202.1| ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator [Arabidopsis thaliana]
gb|AAD39333.1| response regulator 3 [Arabidopsis thaliana]
gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3
dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
Length = 231
Score = 159 bits (402), Expect = 3e-37
Identities = 82/140 (58%), Positives = 110/140 (78%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDSL DR +IERLL+ +S +VT VDSG +AL+FLGL D + V + D
Sbjct: 34 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAV------EFD--- 84
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ V+LIITDYCMPGMTGY+LLKKIKES+S +++PVVIMSSEN+ +RI+RCLEEGA++
Sbjct: 85 --RLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAED 142
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F LKPV+L+D+ +L+ ++ +
Sbjct: 143 FLLKPVKLADVKRLRSYLTR 162
Score = 44.7 bits (104), Expect = 0.009
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L+FLGL D + V + D + V+LIITDYCMPGMTGY+LL+
Sbjct: 69 LEFLGLDDDKAAV------EFD-----RLKVDLIITDYCMPGMTGYELLK 107
>gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 159 bits (401), Expect = 3e-37
Identities = 80/145 (55%), Positives = 111/145 (76%), Gaps = 3/145 (2%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLG---LHDQDSTVPPVHTHQLD 417
HVLAVDD++ DRK++E+LL +SS +VTT ++G +AL++LG +H + T P +H
Sbjct: 10 HVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLGNLGVHSESQT-PALHQDDAI 68
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
A D+ VNLIITDYC P MTGY+LLKKIKESS L+DIPV++MSSENIP+RI++CLEEG
Sbjct: 69 PTAAGDLKVNLIITDYCKPEMTGYELLKKIKESSILKDIPVIVMSSENIPTRIHKCLEEG 128
Query: 598 ADEFFLKPVRLSDMNKLKPHILKSR 672
A F LKP++ SD+ +L+ +++ R
Sbjct: 129 AQMFMLKPLKHSDVTRLRCQLMQCR 153
Score = 48.5 bits (114), Expect = 6e-04
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +3
Query: 12 LGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LG+H + T P +H A D+ VNLIITDYC P MTGY+LL+
Sbjct: 51 LGVHSESQT-PALHQDDAIPTAAGDLKVNLIITDYCKPEMTGYELLK 96
>ref|XP_468534.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
emb|CAI79407.1| Type A response regulator 3 [Oryza sativa (indica cultivar-group)]
dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa (japonica cultivar-group)]
dbj|BAD22948.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 131
Score = 145 bits (365), Expect = 5e-33
Identities = 74/134 (55%), Positives = 98/134 (73%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS+ DR +I RLL++S ++VTTVDSG +AL+ L L
Sbjct: 12 HVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSL------------------- 52
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
D V++IITDYCMP MTG+DLLK++KES+ L++IPVV+MSSEN P+RI RCLEEGA++
Sbjct: 53 --DRNVHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAED 110
Query: 607 FFLKPVRLSDMNKL 648
F +KPVR SD+++L
Sbjct: 111 FLIKPVRPSDVSRL 124
Score = 38.1 bits (87), Expect = 0.85
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 84 DVAVNLIITDYCMPGMTGYDLLQ 152
D V++IITDYCMP MTG+DLL+
Sbjct: 53 DRNVHMIITDYCMPEMTGFDLLK 75
>dbj|BAB17300.1| response regulator [Zea mays]
Length = 135
Score = 144 bits (364), Expect = 6e-33
Identities = 77/140 (55%), Positives = 98/140 (70%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS DR +I +L++S F+VT VDSG +AL+ LG
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEPN---------------- 60
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
V++IITDY MP MTGY+LLKKIKESS L++IPVVIMSSEN+P+RINRCLEEGA++
Sbjct: 61 -----VSMIITDYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAED 115
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F LKPVR SD+++L +L+
Sbjct: 116 FLLKPVRPSDVSRLCSRVLR 135
>ref|XP_474315.1| OSJNBb0004A17.13 [Oryza sativa (japonica cultivar-group)]
emb|CAI79410.1| Type A response regulator 6 [Oryza sativa (indica cultivar-group)]
emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa (japonica cultivar-group)]
emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa (japonica cultivar-group)]
dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa (japonica cultivar-group)]
Length = 170
Score = 144 bits (362), Expect = 1e-32
Identities = 79/148 (53%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
Frame = +1
Query: 214 VMAAVA---TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDS 384
V+AA A ++ HVLAVDDS DR +I ++L++S ++VTTV+S ++AL+ L L
Sbjct: 37 VVAAAAGDEAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL----G 92
Query: 385 TVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENI 564
VP V N+IITDY MPGMTGY+LLK++KESS L++IPVVIMSSEN+
Sbjct: 93 LVPNV---------------NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENV 137
Query: 565 PSRINRCLEEGADEFFLKPVRLSDMNKL 648
P+RI+RCLEEGA++F LKPVR SD+++L
Sbjct: 138 PNRISRCLEEGAEDFLLKPVRPSDVSRL 165
Score = 38.5 bits (88), Expect = 0.65
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLLQ 152
VN+IITDY MPGMTGY+LL+
Sbjct: 97 VNMIITDYWMPGMTGYELLK 116
>ref|XP_466892.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD26481.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 147
Score = 142 bits (359), Expect = 2e-32
Identities = 80/160 (50%), Positives = 107/160 (66%), Gaps = 2/160 (1%)
Frame = +1
Query: 190 SAAALFRSVMAAVATE--TPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFL 363
+ A+ + +AAVA P HVLAVDDS DR +I +L++S F+VT VDSG +AL+ L
Sbjct: 8 AGGAVVGAAVAAVAVGGGAPPHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELL 67
Query: 364 GLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVV 543
G + V++IITDY MP MTGY+LLKK+KESS L+ IPVV
Sbjct: 68 G---------------------SEPNVSMIITDYWMPEMTGYELLKKVKESSKLKKIPVV 106
Query: 544 IMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHIL 663
IMSSEN+P+RI+RCLEEGA++F +KPVR SD+++L +L
Sbjct: 107 IMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRVL 146
>dbj|BAA82873.1| ZmRR2 [Zea mays]
dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 142 bits (359), Expect = 2e-32
Identities = 76/134 (56%), Positives = 99/134 (73%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS DR +I ++L++S ++VTTVDS ++AL+ L L VP V
Sbjct: 38 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLAL----GLVPDV--------- 84
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
N+IITDY MPGMTGY+LLK +KESS+LR IPVVIMSSEN+P+RI+RCLEEGA++
Sbjct: 85 ------NMIITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAED 138
Query: 607 FFLKPVRLSDMNKL 648
F LKPVR +D+++L
Sbjct: 139 FLLKPVRPADVSRL 152
Score = 38.5 bits (88), Expect = 0.65
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLLQ 152
VN+IITDY MPGMTGY+LL+
Sbjct: 84 VNMIITDYWMPGMTGYELLK 103
>emb|CAI79409.1| Type A response regulator 5 [Oryza sativa (indica cultivar-group)]
dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa (japonica cultivar-group)]
Length = 134
Score = 140 bits (352), Expect = 2e-31
Identities = 74/140 (52%), Positives = 98/140 (70%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS DR +I +L++S F+VT VDSG +AL+ LG
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------------- 55
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ V++IITDY MP MTGY+LLKK+KESS L++IPVVIMSSEN+ +RINRCLEEGA++
Sbjct: 56 -SEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAED 114
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F LKPV+ SD+++L +L+
Sbjct: 115 FLLKPVQPSDVSRLCSRVLR 134
>emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa (japonica cultivar-group)]
Length = 137
Score = 140 bits (352), Expect = 2e-31
Identities = 74/140 (52%), Positives = 98/140 (70%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVLAVDDS DR +I +L++S F+VT VDSG +AL+ LG
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------------- 55
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ V++IITDY MP MTGY+LLKK+KESS L++IPVVIMSSEN+ +RINRCLEEGA++
Sbjct: 56 -SEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAED 114
Query: 607 FFLKPVRLSDMNKLKPHILK 666
F LKPV+ SD+++L +L+
Sbjct: 115 FLLKPVQPSDVSRLCSRVLR 134
>dbj|BAA85112.1| response regulator 1 [Zea mays]
dbj|BAA75253.1| response regulator [Zea mays]
Length = 157
Score = 136 bits (343), Expect = 2e-30
Identities = 75/147 (51%), Positives = 103/147 (70%)
Frame = +1
Query: 208 RSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDST 387
++V++ A+E HVLAVDDS DR +I R+L+ S ++VT V+S ++AL+ L L
Sbjct: 25 KTVVSVDASELEKHVLAVDDSSVDRAVIARILRGSRYRVTAVESATRALELLAL----GL 80
Query: 388 VPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIP 567
+P V ++IITDY MPGMTGY+LLK +KES++LR IPVVIMSSEN+P
Sbjct: 81 LPDV---------------SMIITDYWMPGMTGYELLKCVKESAALRGIPVVIMSSENVP 125
Query: 568 SRINRCLEEGADEFFLKPVRLSDMNKL 648
+RI RCLEEGA+ F LKPVR +D+++L
Sbjct: 126 TRITRCLEEGAEGFLLKPVRPADVSRL 152
Score = 36.6 bits (83), Expect = 2.5
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLLQ 152
V++IITDY MPGMTGY+LL+
Sbjct: 84 VSMIITDYWMPGMTGYELLK 103
>emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 132 bits (332), Expect = 3e-29
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
E HVLAVDD+L DRKL+ER+LK SS +VTT ++G +AL++LGL D T
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQT--------- 67
Query: 415 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
D N + VNLIITDYCMPGMTG++LLKK+KESS+L+++PVVI+SSENIP+RIN+
Sbjct: 68 DSLTNV-MKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINK 122
Score = 44.3 bits (103), Expect = 0.012
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
L++LGL D T D N + VNLIITDYCMPGMTG++LL+
Sbjct: 56 LEYLGLGDPQQT---------DSLTNV-MKVNLIITDYCMPGMTGFELLK 95
>ref|NP_911990.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
emb|CAI79411.1| Type A response regulator 7 [Oryza sativa (indica cultivar-group)]
dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa (japonica cultivar-group)]
dbj|BAC15873.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 206
Score = 128 bits (321), Expect = 6e-28
Identities = 71/142 (50%), Positives = 95/142 (66%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P +V+AVDDS DR +I LL+ S ++ DSG +AL+ LG
Sbjct: 90 PPYVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG------------------ 127
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
+ V++IITDY MP MTGYDLLKKIKESS L+ IPVVIMSSEN+P+RI+RCLEEGA
Sbjct: 128 ---SEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGA 184
Query: 601 DEFFLKPVRLSDMNKLKPHILK 666
++F LKPVR +D++++ +L+
Sbjct: 185 EDFLLKPVRPADISRITSRMLQ 206
Score = 35.0 bits (79), Expect = 7.2
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLLQ 152
V++IITDY MP MTGYDLL+
Sbjct: 132 VSMIITDYWMPEMTGYDLLK 151
>ref|XP_466223.1| putative response regulator 7 [Oryza sativa (japonica
cultivar-group)]
ref|XP_506827.1| PREDICTED OSJNBb0038F20.11 gene product [Oryza sativa (japonica
cultivar-group)]
emb|CAI79406.1| Type A response regulator 2 [Oryza sativa (indica cultivar-group)]
dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa (japonica cultivar-group)]
dbj|BAD16423.1| putative response regulator 7 [Oryza sativa (japonica
cultivar-group)]
Length = 252
Score = 125 bits (314), Expect = 4e-27
Identities = 69/149 (46%), Positives = 94/149 (63%), Gaps = 15/149 (10%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKT-------------SSFQVTTVDSGSKALQFLGLH--DQDS 384
VL VDDS DR+++E LL+ + F VT VDSG KA++ LG D+D
Sbjct: 8 VLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRGDRDH 67
Query: 385 TVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENI 564
P + AA D A+++++TDYCMP MTGYDLLK IK S IPVV+MSSEN
Sbjct: 68 LTP---SSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENE 124
Query: 565 PSRINRCLEEGADEFFLKPVRLSDMNKLK 651
P RI+RCL GA++F LKP++++D+ +L+
Sbjct: 125 PQRISRCLTAGAEDFILKPLKMNDVQRLR 153
Score = 44.3 bits (103), Expect = 0.012
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 72 AANQDVAVNLIITDYCMPGMTGYDLLQPF-FLYSPN 176
AA D A+++++TDYCMP MTGYDLL+ L SPN
Sbjct: 77 AAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPN 112
>dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 123 bits (309), Expect = 2e-26
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 9/161 (5%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSS-------FQVTTVDSGSKALQFLGLHDQDSTVPPVHTH 408
VL VDDS DRK++E LL+ + F VT VDSG KA++ L L +Q
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGG-------- 66
Query: 409 QLDVAANQD--VAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
QLD A + +++++TDYCMP MTGYDLLK IK SS IPVV+MSSEN P RI+R
Sbjct: 67 QLDSCAADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISR 126
Query: 583 CLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDS 705
CL GA++F LKP++ D+ +L+ +R + Q +S
Sbjct: 127 CLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDDAAHQCES 167
Score = 40.4 bits (93), Expect = 0.17
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +3
Query: 87 VAVNLIITDYCMPGMTGYDLLQPF-FLYSPN 176
+ +++++TDYCMP MTGYDLL+ L SPN
Sbjct: 78 ITIDIVLTDYCMPEMTGYDLLKAIKALSSPN 108
>emb|CAI79405.1| Type A response regulator 1 [Oryza sativa (indica cultivar-group)]
Length = 231
Score = 120 bits (302), Expect = 1e-25
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTS----SFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
VL VDDS DR++++ LL +S SF V VDS KA++FLGL ++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEE------------- 56
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
++ A+++++TDYCMP MTGY+LLK IK S L+ IPV++MSSEN P RI+RC+ G
Sbjct: 57 ---GKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAG 113
Query: 598 ADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSI 753
A++F +KP++ D+ +L+ +C+ Q D+ S + + SD +
Sbjct: 114 AEDFIVKPLQSKDVQRLR------KCSPANTQCCDAGSDGKPPLLLLPSDHV 159
Score = 40.0 bits (92), Expect = 0.22
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 81 QDVAVNLIITDYCMPGMTGYDLLQPFFLYSP 173
++ A+++++TDYCMP MTGY+LL+ SP
Sbjct: 58 KEQAIDMVLTDYCMPEMTGYELLKAIKALSP 88
>dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa (japonica cultivar-group)]
Length = 231
Score = 120 bits (300), Expect = 2e-25
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTS----SFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
VL VDDS DR++++ LL +S SF V VDS KA++FLGL ++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEE------------- 56
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
++ A+++++TDYCMP MTGY+LLK IK S L+ IPV++MSSEN P RI+RC+ G
Sbjct: 57 ---GKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAG 113
Query: 598 ADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSI 753
A++F +KP++ D+ +L+ C+ Q D+ S + + SD +
Sbjct: 114 AEDFIVKPLQSKDVQRLR------NCSPANTQCCDAGSDGKPPLLLLPSDHV 159
Score = 40.0 bits (92), Expect = 0.22
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 81 QDVAVNLIITDYCMPGMTGYDLLQPFFLYSP 173
++ A+++++TDYCMP MTGY+LL+ SP
Sbjct: 58 KEQAIDMVLTDYCMPEMTGYELLKAIKALSP 88
>dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 119 bits (299), Expect = 2e-25
Identities = 68/142 (47%), Positives = 88/142 (61%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P HVLAVDDS DRK IERLL+ SS +VT VDS ++ALQ+LGL ++ +V
Sbjct: 24 PLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSV---------- 73
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
+D+ VNLI+TDY MPGMTGY+LLKKIK CLEEGA
Sbjct: 74 -GFEDLKVNLIMTDYSMPGMTGYELLKKIK------------------------CLEEGA 108
Query: 601 DEFFLKPVRLSDMNKLKPHILK 666
++F LKPV+LSD+ +L+ ++K
Sbjct: 109 EDFLLKPVKLSDVKRLRDSLMK 130
Score = 43.9 bits (102), Expect = 0.015
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLQ 152
LQ+LGL ++ +V +D+ VNLI+TDY MPGMTGY+LL+
Sbjct: 61 LQYLGLDVEEKSV-----------GFEDLKVNLIMTDYSMPGMTGYELLK 99
>dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa (japonica
cultivar-group)]
Length = 121
Score = 109 bits (272), Expect = 3e-22
Identities = 59/139 (42%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL-HDQDSTVPPVHTHQLDVA 423
HVL VDD+L DR ++ L + +VT V+S +AL FL HD
Sbjct: 5 HVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMFLDSEHD---------------- 48
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
VN+I++DYCMP MTGYDLL ++K+S L +PVVI SS+NIP RI +CL+ GA
Sbjct: 49 ------VNMIVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAK 102
Query: 604 EFFLKPVRLSDMNKLKPHI 660
++ LKPV++ D+ ++ +I
Sbjct: 103 DYILKPVKIVDLPRILNYI 121
Score = 39.3 bits (90), Expect = 0.38
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLL 149
VN+I++DYCMP MTGYDLL
Sbjct: 49 VNMIVSDYCMPDMTGYDLL 67
>gb|AAP32005.1| putative two-component system response regulator [Populus alba x
Populus tremula]
Length = 74
Score = 105 bits (263), Expect = 3e-21
Identities = 49/69 (71%), Positives = 61/69 (88%)
Frame = +1
Query: 466 CMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNK 645
CMPGMTGY+LLKKIKESSS R+IPVVIMSSEN+ +RI+RCLEEGA+EF KPV+LSD+ +
Sbjct: 1 CMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSDVKR 60
Query: 646 LKPHILKSR 672
L+ + + SR
Sbjct: 61 LRDYYMASR 69
>dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa (japonica
cultivar-group)]
Length = 121
Score = 103 bits (257), Expect = 2e-20
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL-HDQDSTVPPVHTHQLDVA 423
HVL VDD+ DR +I L + +VT V+S +AL FL HD
Sbjct: 5 HVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVFLDSEHD---------------- 48
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
VN+I++DYCMP MTGYDLL ++K+S L +PV+I SS+NIP RI +C + GA
Sbjct: 49 ------VNMIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAK 102
Query: 604 EFFLKPVRLSDMNKLKPHI 660
++ LKPV+++D+ ++ +I
Sbjct: 103 DYILKPVKIADVPRILNYI 121
Score = 38.9 bits (89), Expect = 0.50
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLL 149
VN+I++DYCMP MTGYDLL
Sbjct: 49 VNMIVSDYCMPEMTGYDLL 67
>ref|XP_482086.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
emb|CAI79412.1| Type A response regulator 8 [Oryza sativa (indica cultivar-group)]
dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa (japonica cultivar-group)]
dbj|BAD05296.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
dbj|BAC45098.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 121
Score = 103 bits (256), Expect = 2e-20
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL-HDQDSTVPPVHTHQLDVA 423
HVL VDD+ DR ++ L + +VT V+S +AL FL HD
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFLDSEHD---------------- 48
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
V++I++DYCMP MTGY+LL ++K+S L +PVVI SS+NIP RI +CL+ GA
Sbjct: 49 ------VDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAK 102
Query: 604 EFFLKPVRLSDMNKLKPHI 660
++ LKPV++ D+ ++ +I
Sbjct: 103 DYILKPVKIVDVPRIMKYI 121
Score = 35.4 bits (80), Expect = 5.5
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLL 149
V++I++DYCMP MTGY+LL
Sbjct: 49 VDMIVSDYCMPDMTGYNLL 67
>ref|XP_472626.1| P0076O17.11 [Oryza sativa (japonica cultivar-group)]
emb|CAE02513.1| P0076O17.11 [Oryza sativa (japonica cultivar-group)]
Length = 108
Score = 97.4 bits (241), Expect = 1e-18
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTS----SFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
VL VDDS DR++++ LL +S SF V VDS KA++FLGL ++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEE------------- 56
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
++ A+++++TDYCMP MTGY+LLK IK S L+ IPV++MSSEN P RI+R
Sbjct: 57 ---GKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISR 108
Score = 40.0 bits (92), Expect = 0.22
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 81 QDVAVNLIITDYCMPGMTGYDLLQPFFLYSP 173
++ A+++++TDYCMP MTGY+LL+ SP
Sbjct: 58 KEQAIDMVLTDYCMPEMTGYELLKAIKALSP 88
>ref|XP_482091.1| response regulator-like protein [Oryza sativa (japonica
cultivar-group)]
dbj|BAC45103.1| response regulator-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 167
Score = 92.8 bits (229), Expect = 3e-17
Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 301 LKTSSFQVTTVDSGSKALQFLGL-HDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPG 477
L S +VT V+S +AL FL HD VN+I++DYCMP
Sbjct: 69 LARRSIRVTAVESVMQALMFLDSEHD----------------------VNMIVSDYCMPD 106
Query: 478 MTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPH 657
MTGYDLL ++K+S L +PVVI SS+NIP RI +CL+ GA ++ LKPV++ D+ ++ +
Sbjct: 107 MTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRILNY 166
Query: 658 I 660
I
Sbjct: 167 I 167
Score = 39.3 bits (90), Expect = 0.38
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLL 149
VN+I++DYCMP MTGYDLL
Sbjct: 95 VNMIVSDYCMPDMTGYDLL 113
>ref|XP_481928.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
dbj|BAD03775.1| putative response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 135
Score = 87.8 bits (216), Expect = 9e-16
Identities = 37/73 (50%), Positives = 57/73 (78%)
Frame = +1
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+I++DYCMP MTGYDLL ++K+S L +PV+I SS+NIP RI +C + GA ++ LKP
Sbjct: 63 VNMIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYILKP 122
Query: 622 VRLSDMNKLKPHI 660
V+++D+ ++ +I
Sbjct: 123 VKIADVPRILNYI 135
Score = 38.9 bits (89), Expect = 0.50
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 93 VNLIITDYCMPGMTGYDLL 149
VN+I++DYCMP MTGYDLL
Sbjct: 63 VNMIVSDYCMPEMTGYDLL 81
>ref|NP_178754.1| DNA binding / two-component response regulator [Arabidopsis
thaliana]
gb|AAD15535.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 136
Score = 82.4 bits (202), Expect = 4e-14
Identities = 37/61 (60%), Positives = 51/61 (83%)
Frame = +1
Query: 511 ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQH 690
ES++ R I VVIMSSEN+P+RI+RCLE+GA+EFFLKPV+L D KLKPH++K++ +E
Sbjct: 9 ESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMKTKLKKESE 68
Query: 691 Q 693
+
Sbjct: 69 K 69
>dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 80.9 bits (198), Expect = 1e-13
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LL+ S++VT V +G +A +FL N
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFL--------------------EN 118
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V++++T+ MP +TG LL KI +L+ IPV++MSS + + +CL +GA +F
Sbjct: 119 LSNNVDIVLTEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDF 178
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSS--DSINNRKR 768
+KP+R +++ L H+ + RC+ S S SG + +I S DS +N +R
Sbjct: 179 LVKPIRKNELKNLWQHVWR-RCHSS--SGSGSESGVQTQKSIKSKRFDSDDNDRR 230
>dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 77.8 bits (190), Expect = 1e-12
Identities = 49/170 (28%), Positives = 87/170 (51%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LL+ S++VT V +G +A + L N
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVL--------------------EN 118
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V++++T+ MP ++G LL KI +L+ IPV++MSS + + +CL +GA +F
Sbjct: 119 LSNNVDIVLTEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDF 178
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S +++ S DS NN
Sbjct: 179 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGVHTQKSIKSKSIDSDNN 227
>pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 76.6 bits (187), Expect = 2e-12
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL+ + VTT + KAL+ L +
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNK---------------- 62
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L+I+D MP M G+ LL+ + D+PV+++S+ + P + + + GA ++
Sbjct: 63 ----FDLVISDVDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVTHGACDY 115
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERR----NPTISSSDSIN---NRKR 768
LKPVR+ ++ + H+++SR ++ + +++G++R N + +SD N NRKR
Sbjct: 116 LLKPVRIEELKNIWQHVVRSRFDK---NRGSNNNGDKRDGSGNEGVGNSDPNNGKGNRKR 172
Query: 769 KGAGTEE 789
K E+
Sbjct: 173 KDQYNED 179
>dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa (indica cultivar-group)]
Length = 704
Score = 76.6 bits (187), Expect = 2e-12
Identities = 44/170 (25%), Positives = 85/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VD R+++ LL+ ++V ++G +A +L +
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL--------------------ED 103
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++L++T+ MPG++G LL +I + ++IPV++MSS + + +CL +GA +F
Sbjct: 104 MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++ S D NN
Sbjct: 164 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIQTQKCAKSKSGDESNN 212
>ref|NP_180090.2| ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/
two-component response regulator [Arabidopsis thaliana]
sp|P62598|ARR12_ARATH Two-component response regulator ARR12
Length = 596
Score = 76.6 bits (187), Expect = 2e-12
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL+ + VTT + KAL+ L +
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNK---------------- 62
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L+I+D MP M G+ LL+ + D+PV+++S+ + P + + + GA ++
Sbjct: 63 ----FDLVISDVDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVTHGACDY 115
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERR----NPTISSSDSIN---NRKR 768
LKPVR+ ++ + H+++SR ++ + +++G++R N + +SD N NRKR
Sbjct: 116 LLKPVRIEELKNIWQHVVRSRFDK---NRGSNNNGDKRDGSGNEGVGNSDPNNGKGNRKR 172
Query: 769 KGAGTEE 789
K E+
Sbjct: 173 KDQYNED 179
>ref|XP_479630.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
sp|Q689G8|PRR37_ORYSA Two-component response regulator-like PRR37 (Pseudo-response
regulator 37) (OsPRR37)
Length = 742
Score = 76.6 bits (187), Expect = 2e-12
Identities = 44/170 (25%), Positives = 85/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VD R+++ LL+ ++V ++G +A +L +
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL--------------------ED 103
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++L++T+ MPG++G LL +I + ++IPV++MSS + + +CL +GA +F
Sbjct: 104 MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++ S D NN
Sbjct: 164 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIQTQKCAKSKSGDESNN 212
>dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 76.6 bits (187), Expect = 2e-12
Identities = 44/170 (25%), Positives = 85/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VD R+++ LL+ ++V ++G +A +L +
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL--------------------ED 103
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++L++T+ MPG++G LL +I + ++IPV++MSS + + +CL +GA +F
Sbjct: 104 MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++ S D NN
Sbjct: 164 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIQTQKCAKSKSGDESNN 212
>dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 74.7 bits (182), Expect = 8e-12
Identities = 49/179 (27%), Positives = 89/179 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R ++ LL+ S+ V +V G KA D+
Sbjct: 59 VLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAW--------------------DIVKE 98
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ ++I+++ +P +G LL KI + R IPV++MSS++ S + +C+++GA +F
Sbjct: 99 KNFNFDIILSEVEVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDF 158
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTE 786
+KPVR +++ L H+ + C+ +++ + NP+ S + S NN GAG E
Sbjct: 159 LVKPVRKNELRNLWQHVWRRHCSTRYPNGAENGA---NNPSASENMSNNN----GAGNE 210
>gb|ABA91559.1| timing of CAB expression 1, putative [Oryza sativa (japonica
cultivar-group)]
Length = 699
Score = 73.6 bits (179), Expect = 2e-11
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R+++ LL+ ++V V G KA V
Sbjct: 46 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAW--------------------GVMRE 85
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ A +L++T+ MP ++G +LL +I S ++IPV++MSS++ + RC+++GA +F
Sbjct: 86 RAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDF 145
Query: 610 FLKPVRLSDMNKL-----KPHILKSRCNQEQHQQSDSH---SGERRNPTISSSDSINNRK 765
+KPVR +++ L + H + S+ N ++ + +H +G + T SD ++ +
Sbjct: 146 LVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGEHSDEESDAQ 205
Query: 766 RKGAGTE 786
G+ E
Sbjct: 206 SSGSKRE 212
>ref|ZP_00673521.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
gb|EAO27911.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
Length = 1207
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +1
Query: 211 SVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTV 390
S+ ++ E+ F +L VDD + L+ L ++QV ++G KAL L
Sbjct: 728 SLPSSSKKESEFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDILA-------- 779
Query: 391 PPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPS 570
QD +LI+ D MPGMTGY++ +K++E+ L +P+++++++N S
Sbjct: 780 -------------QDFLPDLILLDVMMPGMTGYEVTQKVRETWLLHQLPIIMLTAKNRVS 826
Query: 571 RINRCLEEGADEFFLKPVRLSD-MNKLKPHI 660
+ LE GA+++ KP + + ++K HI
Sbjct: 827 DLVMGLEVGANDYLSKPFHKKELLARIKTHI 857
>gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 72.0 bits (175), Expect = 5e-11
Identities = 47/170 (27%), Positives = 86/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LLK S++VT V +A + L D+ S
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKS--------------- 108
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP +G LL KI +L++IPV++MSS + + +CL GA +F
Sbjct: 109 ---CIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDF 165
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++++ S++ N
Sbjct: 166 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIHDKKSVKPESTEGSEN 214
>ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [gamma proteobacterium
KT 71]
gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [gamma proteobacterium
KT 71]
Length = 495
Score = 72.0 bits (175), Expect = 5e-11
Identities = 47/133 (35%), Positives = 65/133 (48%)
Frame = +1
Query: 223 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 402
A T P +LAVDD +R L+ R L S V T SG +AL+ L
Sbjct: 134 AKITSDPGFILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEML------------- 180
Query: 403 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
AN DV V ++ D MPGM G ++L++IK LR PV+++S E I
Sbjct: 181 -------ANADVDV--VLLDRMMPGMDGREVLRRIKAEPRLRATPVIMISGEQDMQGIIE 231
Query: 583 CLEEGADEFFLKP 621
C++ GAD++ KP
Sbjct: 232 CIKAGADDYLFKP 244
>gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 71.6 bits (174), Expect = 7e-11
Identities = 46/170 (27%), Positives = 86/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LLK S+++T V +A + L D+ S
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRIL--EDEKS--------------- 108
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP +G LL KI +L++IPV++MSS + + +CL GA +F
Sbjct: 109 ---CIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDF 165
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++++ S++ N
Sbjct: 166 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIHDKKSVKPESTEGSEN 214
>ref|NP_568919.1| APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator
[Arabidopsis thaliana]
dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 (Pseudo-response
regulator 3)
dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 71.2 bits (173), Expect = 9e-11
Identities = 47/170 (27%), Positives = 85/170 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LLK S++VT V +A + L D+ S
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKS--------------- 108
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP +G LL KI +L++IPV++MSS + + +CL GA +F
Sbjct: 109 ---CIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDF 165
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + RC+ S+S ++++ S+ N
Sbjct: 166 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSESGIHDKKSVKPESTQGSEN 214
>dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 70.9 bits (172), Expect = 1e-10
Identities = 47/179 (26%), Positives = 90/179 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R ++ LL+ S+ V V G KA D+
Sbjct: 75 VLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAW--------------------DIVEE 114
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ ++I+++ +P +G +LL KI + R IPV++MSS++ S + +C+++GA +F
Sbjct: 115 KNFNFDIILSEVEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDF 174
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTE 786
+KPVR +++ L H+ + C+ ++ E + T S+S++++N GAG +
Sbjct: 175 LVKPVRKNELRNLWQHVWRRHCSIPY-----ANGTENGDNTQSASENMSN--NNGAGND 226
>gb|EAN27583.1| PAS:GGDEF [Magnetococcus sp. MC-1]
ref|ZP_00607988.1| PAS:GGDEF [Magnetococcus sp. MC-1]
Length = 571
Score = 70.1 bits (170), Expect = 2e-10
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTV-DSGSKALQFLGLHDQD--STVP--PVHTHQ 411
H+ VDDS DR L+ R+L + + + DSG LQ LGL D S P P HT
Sbjct: 2 HIAIVDDSPDDRLLLMRILSKAGYSTLQLHDSGEAFLQTLGLTPTDTASIAPFNPPHTSL 61
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
D+ I D MP M G +L+++K + ++IPV++++ + P + E
Sbjct: 62 PDI----------IFMDVMMPDMDGLSVLRQLKANPPTQNIPVIMVTGNDRPRDLAHAFE 111
Query: 592 EGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSD 702
EGA ++ KP+R ++ I+K +Q + S+
Sbjct: 112 EGATDYITKPIRRVELLARLRSIIKLERAMQQVRSSE 148
>dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa (indica cultivar-group)]
Length = 767
Score = 69.7 bits (169), Expect = 3e-10
Identities = 42/152 (27%), Positives = 77/152 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R+++ LL+ ++V ++G A Q L + H
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---------EDLQNH------- 126
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP ++G LL KI +DIPV++MSS + + +CL +GA +F
Sbjct: 127 ----IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDF 182
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDS 705
+KP+R +++ L H+ + RC+ S+S
Sbjct: 183 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSES 213
>dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa (japonica
cultivar-group)]
sp|Q689G4|PRR73_ORYSA Two-component response regulator-like PRR73 (Pseudo-response
regulator 73) (OsPRR73)
Length = 767
Score = 69.7 bits (169), Expect = 3e-10
Identities = 42/152 (27%), Positives = 77/152 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R+++ LL+ ++V ++G A Q L + H
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---------EDLQNH------- 126
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP ++G LL KI +DIPV++MSS + + +CL +GA +F
Sbjct: 127 ----IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDF 182
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDS 705
+KP+R +++ L H+ + RC+ S+S
Sbjct: 183 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSES 213
>gb|EAO25129.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00662234.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Syntrophomonas wolfei str. Goettingen]
Length = 497
Score = 69.7 bits (169), Expect = 3e-10
Identities = 40/154 (25%), Positives = 75/154 (48%)
Frame = +1
Query: 205 FRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDS 384
F + A+ TP VL V+D+ ++K++ ++L F+V +G +AL+ L
Sbjct: 266 FENKEEALLDFTPIRVLLVEDNPLNQKIVGQMLYNYGFEVIMASNGLEALRIL------- 318
Query: 385 TVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENI 564
QD VN+++ D MP M GY+ + I++ S RDIP++ +++ ++
Sbjct: 319 ---------------QDKPVNIVLMDMQMPVMDGYEATQFIRQHSKWRDIPIIAITAHSL 363
Query: 565 PSRINRCLEEGADEFFLKPVRLSDMNKLKPHILK 666
P +CL G + KP + ++ +L +K
Sbjct: 364 PGDREKCLACGCTSYIAKPFKAHELVQLMKEYIK 397
>ref|XP_493854.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 789
Score = 69.7 bits (169), Expect = 3e-10
Identities = 42/152 (27%), Positives = 77/152 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R+++ LL+ ++V ++G A Q L + H
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---------EDLQNH------- 126
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ MP ++G LL KI +DIPV++MSS + + +CL +GA +F
Sbjct: 127 ----IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDF 182
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDS 705
+KP+R +++ L H+ + RC+ S+S
Sbjct: 183 LVKPIRKNELKNLWQHVWR-RCHSSSGSGSES 213
>ref|NP_568107.1| APRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator
[Arabidopsis thaliana]
gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 (Pseudo-response
regulator 7)
dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
Length = 727
Score = 69.3 bits (168), Expect = 3e-10
Identities = 48/180 (26%), Positives = 88/180 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LL+ S++V +G +A + L ++ H
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL---------EDLNNH------- 123
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++++T+ MP ++G LL KI S R+IPV++MSS + + +CL +GA +F
Sbjct: 124 ----IDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDF 179
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEE 789
+KP+R +++ L H+ + RC + S S SG + S SI + ++E
Sbjct: 180 LVKPIRKNELKILWQHVWR-RC--QSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDE 236
>dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 69.3 bits (168), Expect = 3e-10
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +1
Query: 172 PILPCSSAAALFRSV-MAAVATETPFH-----VLAVDDSLPDRKLIERLLKTSSFQVTTV 333
P+L + L R V + A E+P VL VDDS+ R+L++R+L+ + + V
Sbjct: 710 PVLAPDNFTVLLRPVEVRASPMESPQQPITPQVLIVDDSITVRRLLDRVLRQAGYNVVQC 769
Query: 334 DSGSKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKE 513
G +AL FL +AA V+ L+ITD MP + GYDLL+ I+
Sbjct: 770 RDGKEALDFL------------------LAAGDQVS--LVITDIEMPRLDGYDLLEAIRL 809
Query: 514 SSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSR 672
S+ LR +PV +++S + + L+ GA+ + KP + + + +L R
Sbjct: 810 SARLRHLPVAMLTSRGGDTHRQKALQLGANGYITKPFQPQGILQTVTQLLTGR 862
>dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa (japonica
cultivar-group)]
sp|Q689G6|PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response
regulator 95) (OsPRR95)
Length = 623
Score = 69.3 bits (168), Expect = 3e-10
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Frame = +1
Query: 187 SSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLG 366
++A A S + P VL + R +I LL+ ++V G KA
Sbjct: 24 AAAVAAGSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAW---- 79
Query: 367 LHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVI 546
D+ + ++L++T+ +P M+G+ LL I E + ++IPV++
Sbjct: 80 ----------------DILKEKSFNIDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIM 123
Query: 547 MSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHI----LKSRCNQEQHQQSDSHSG 714
MSS + S + +C+ +GA +F +KP+R +++ L H+ L S QH Q + +
Sbjct: 124 MSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSSGVLDVQHTQQEDNLT 183
Query: 715 ER 720
ER
Sbjct: 184 ER 185
>ref|NP_566085.1| APRR9 (PSEUDO-RESPONSE REGULATOR 9); transcription regulator
[Arabidopsis thaliana]
gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gb|AAF86253.1| timing of CAB expression 1-like protein [Arabidopsis thaliana]
sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 (Pseudo-response
regulator 9)
dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
Length = 468
Score = 68.9 bits (167), Expect = 4e-10
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
+T VL V+ R++I LL+ ++V V G A + L +H +
Sbjct: 34 KTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL----------KEKSHNI 83
Query: 415 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
D LI+T+ +P ++G+ LL + E + ++IPV++MSS++ + +C+
Sbjct: 84 D----------LILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLR 133
Query: 595 GADEFFLKPVRLSDMNKLKPHI---LKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRK 765
GA ++ +KP+R +++ L H+ L R + H QS S T + +
Sbjct: 134 GAADYLIKPMRKNELKNLWQHVWRRLTLRDDPTAHAQSLPASQHNLEDTDETCEDSRYHS 193
Query: 766 RKGAGTEEI 792
+G+G + I
Sbjct: 194 DQGSGAQAI 202
>gb|AAS82604.1| putative response regulator [Zea mays]
Length = 87
Score = 68.9 bits (167), Expect = 4e-10
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 469 MPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
+PGMTGY+LLK++KES++L DI VVIMSSEN+P+RI RCLEE
Sbjct: 38 VPGMTGYELLKRVKESAALSDILVVIMSSENVPNRITRCLEE 79
>dbj|BAD82798.1| putative response regulator 11 [Oryza sativa (japonica
cultivar-group)]
Length = 586
Score = 68.6 bits (166), Expect = 6e-10
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M A A VL VDD K++E++L+ S++VTT AL
Sbjct: 1 MDATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVAL-------------- 46
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
D+ + +++I+D MP M G+ LL+ I D+PV++MS + SR+
Sbjct: 47 ------DILRERKNKFDIVISDVNMPDMDGFKLLEHIGLEM---DLPVIMMSIDGETSRV 97
Query: 577 NRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQS-----------DSHSGERR 723
+ ++ GA ++ LKPVR+ ++ + H+ + + ++ + + +S G
Sbjct: 98 MKGVQHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDE 157
Query: 724 NPTISSSDSINNRKRK 771
SDS RKRK
Sbjct: 158 KSLFMRSDSDTMRKRK 173
>ref|ZP_00345566.1| COG0784: FOG: CheY-like receiver [Nostoc punctiforme PCC 73102]
Length = 157
Score = 68.2 bits (165), Expect = 8e-10
Identities = 37/134 (27%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQ--VTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
+L V+DS D ++++RL++ S Q + +G + L+FL D+ + VA
Sbjct: 9 LLVVEDSNEDFRMLQRLMRLMSVQNPIHRCTNGDEVLEFLYQQGSDAHSKGENLPNSKVA 68
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
V I+ D +PG+ G D+L ++K+ S ++IP+V+ ++ + P I C ++GA+
Sbjct: 69 LRPSV----ILLDLNLPGIDGRDILDRLKQDKSFKEIPIVVFTTSSNPKDIELCYQKGAN 124
Query: 604 EFFLKPVRLSDMNK 645
+ +KP+ ++ K
Sbjct: 125 GYLVKPMDAQELKK 138
>gb|ABB32930.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter metallireducens GS-15]
ref|YP_385655.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter metallireducens GS-15]
Length = 414
Score = 68.2 bits (165), Expect = 8e-10
Identities = 42/152 (27%), Positives = 74/152 (48%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M A ++ ++L ++DS + +++T+ + V + +G +AL L
Sbjct: 1 MGATTEQSNGNILIIEDSPTQSAQLRHIMETNGYHVISACNGREALALLS---------- 50
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
+LII+D MPG+ GY+L ++IKE R+IPV++++S + P +
Sbjct: 51 ------------GQTPSLIISDVIMPGIDGYELCRRIKEREDSRNIPVILLTSLSDPHDV 98
Query: 577 NRCLEEGADEFFLKPVRLSDMNKLKPHILKSR 672
R LE GAD F KP + ++L+SR
Sbjct: 99 IRGLECGADNFITKPCNEKHLLSRVSYLLESR 130
>gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 67.8 bits (164), Expect = 1e-09
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R+++ LL+ +QV V++G +A +L D+ +N
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQ----------------DMQSN 88
Query: 430 QDVAVNLIITDYCMPG-MTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
++L++T+ M G ++G DLL +I +DIPV++MSS + + CL GA +
Sbjct: 89 ----IDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAD 144
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG-----ERRNPTISSSDSINN 759
F KP+R +++ L H+ + H S S SG ++ + S DS NN
Sbjct: 145 FLAKPIRKNELKNLWAHVWR-----RSHSSSGSGSGSAIQTQKCTKSKSGDDSNNN 195
>gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 67.8 bits (164), Expect = 1e-09
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R+++ LL+ +QV V++G +A +L D+ +N
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQ----------------DMQSN 88
Query: 430 QDVAVNLIITDYCMPG-MTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
++L++T+ M G ++G DLL +I +DIPV++MSS + + CL GA +
Sbjct: 89 ----IDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAD 144
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG-----ERRNPTISSSDSINN 759
F KP+R +++ L H+ + H S S SG ++ + S DS NN
Sbjct: 145 FLAKPIRKNELKNLWAHVWR-----RSHSSSGSGSGSAIQTQKCTKSKSGDDSNNN 195
>gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 67.8 bits (164), Expect = 1e-09
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R+++ LL+ +QV V++G +A +L D+ +N
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQ----------------DMQSN 88
Query: 430 QDVAVNLIITDYCMPG-MTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
++L++T+ M G ++G DLL +I +DIPV++MSS + + CL GA +
Sbjct: 89 ----IDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAD 144
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG-----ERRNPTISSSDSINN 759
F KP+R +++ L H+ + H S S SG ++ + S DS NN
Sbjct: 145 FLAKPIRKNELKNLWAHVWR-----RSHSSSGSGSGSAIQTQKCTKSKSGDDSNNN 195
>gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 67.8 bits (164), Expect = 1e-09
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R+++ LL+ +QV V++G +A +L D+ +N
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQ----------------DMQSN 88
Query: 430 QDVAVNLIITDYCMPG-MTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
++L++T+ M G ++G DLL +I +DIPV++MSS + + CL GA +
Sbjct: 89 ----IDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAD 144
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG-----ERRNPTISSSDSINN 759
F KP+R +++ L H+ + H S S SG ++ + S DS NN
Sbjct: 145 FLAKPIRKNELKNLWAHVWR-----RSHSSSGSGSGSAIQTQKCTKSKSGDDSNNN 195
>gb|AAK86868.1| AGR_C_1956p [Agrobacterium tumefaciens str. C58]
ref|NP_354083.1| hypothetical protein AGR_C_1956 [Agrobacterium tumefaciens str.
C58]
Length = 445
Score = 67.4 bits (163), Expect = 1e-09
Identities = 41/132 (31%), Positives = 67/132 (50%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHT 405
+ T F VL VDD+ R + +L+ +F+V+ SG++AL+ L
Sbjct: 133 IMTNKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------- 178
Query: 406 HQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
+QD ++ L+ITDY MP M GY+L ++I++S S D+ V+ +SS
Sbjct: 179 -------SQDPSIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASF 231
Query: 586 LEEGADEFFLKP 621
L+ GA +F +P
Sbjct: 232 LKAGASDFVYRP 243
>ref|XP_464340.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD25144.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
Length = 626
Score = 67.4 bits (163), Expect = 1e-09
Identities = 45/174 (25%), Positives = 83/174 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL + VTT + AL+ L N
Sbjct: 31 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REN 71
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+D +L+I+D MP M G+ LL+ + D+PV+++S+ + + + GA ++
Sbjct: 72 KD-QFDLVISDVHMPDMDGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDY 127
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRK 771
LKPVRL + + H+++ + +++ +D +G++ + +SI + K
Sbjct: 128 LLKPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIGANRNK 181
>gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 67.4 bits (163), Expect = 1e-09
Identities = 36/138 (26%), Positives = 69/138 (50%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVL +D R + +L +QVT V++G A D
Sbjct: 4 HVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLAR--------------------DELL 43
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
QD +++++ D MP M G++LL ++E +L+ IPV++MSS+ ++ C+ +GA +
Sbjct: 44 KQDSNIDIVLLDLYMPEMDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKD 103
Query: 607 FFLKPVRLSDMNKLKPHI 660
+ KP+R+ ++ + ++
Sbjct: 104 YIFKPLRVQNVKAIAKYV 121
>dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 67.4 bits (163), Expect = 1e-09
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ RK++ LL+ ++V++ G +A + L D+
Sbjct: 33 VLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDT--------------- 77
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L++T+ +P ++GY LL + E + + IPV++MSS + + C+ +GA +F
Sbjct: 78 -----DLVLTEVELPNVSGYALLSMMMEHETCKSIPVIMMSSNDSMKMVFECMLKGAADF 132
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQ------QSDSHSGERRNPTISSSDSINNRKRK 771
+KP+R +++ L H+ + + + ++S N T DS NN++R
Sbjct: 133 LVKPIRKNELRNLWQHVWRRQSSNRAENVPPVIGAANSEYNSASNHTSDCMDS-NNKRRA 191
Query: 772 GA 777
G+
Sbjct: 192 GS 193
>gb|AAL42073.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
ref|NP_531757.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
Length = 430
Score = 67.4 bits (163), Expect = 1e-09
Identities = 41/132 (31%), Positives = 67/132 (50%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHT 405
+ T F VL VDD+ R + +L+ +F+V+ SG++AL+ L
Sbjct: 118 IMTNKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------- 163
Query: 406 HQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
+QD ++ L+ITDY MP M GY+L ++I++S S D+ V+ +SS
Sbjct: 164 -------SQDPSIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASF 216
Query: 586 LEEGADEFFLKP 621
L+ GA +F +P
Sbjct: 217 LKAGASDFVYRP 228
>gb|AAZ48623.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Dechloromonas aromatica RCB]
ref|YP_287093.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Dechloromonas aromatica RCB]
Length = 1866
Score = 67.0 bits (162), Expect = 2e-09
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Frame = +1
Query: 178 LPCSSAAALFRSVMAA-----VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSG 342
+P S A A+ +V AA A E V+ VDDSL RK+ RLL +QV G
Sbjct: 1716 VPVSGAPAVVAAVPAAPEPVATAVEMLPTVMVVDDSLTVRKITSRLLMREGYQVILAKDG 1775
Query: 343 SKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSS 522
AL+ L DV ++I++D MP M G+DL++ I+
Sbjct: 1776 VDALEQL----------------------IDVMPDVILSDIEMPRMDGFDLVRNIRAEER 1813
Query: 523 LRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
LR +P+++++S N LE GA+ + KP
Sbjct: 1814 LRSVPIIMITSRTADKHRNYALEIGANHYLGKP 1846
>gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 67.0 bits (162), Expect = 2e-09
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 10/189 (5%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L D+ + + LL S+QVT V S + + L D
Sbjct: 31 ILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPD---------------- 74
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++I+++ +P G +LK I L+ IPV++MS+++ S + +CL GA ++
Sbjct: 75 ----IDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADY 130
Query: 610 FLKPVRLSDMNKLKPHILKSR----------CNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R ++M L H+ + R N + + HS N T SD ++
Sbjct: 131 LVKPLRTNEMLNLWTHMWRRRQMLGLAEKNIVNYDFDLAASDHSDANTNSTTLFSDDTDD 190
Query: 760 RKRKGAGTE 786
R R+G E
Sbjct: 191 RSRRGVNLE 199
>dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125]
ref|NP_242413.1| hypothetical protein BH1547 [Bacillus halodurans C-125]
Length = 661
Score = 66.6 bits (161), Expect = 2e-09
Identities = 40/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 190 SAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL 369
+AA L + ++ VA +L VDD + K+I +L +++V TV SG +A+ L
Sbjct: 314 AAATLSKPTISPVAYRP--RILVVDDEPVNLKVIASILANEAYEVKTVISGEEAIAVLDT 371
Query: 370 HDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIM 549
+ D L++ D MP M+GY+L K I++ +L ++P++++
Sbjct: 372 KEWD----------------------LVVADVMMPKMSGYELTKNIRQRFTLTELPILLI 409
Query: 550 SSENIPSRINRCLEEGADEFFLKPVRLSDM 639
++ + P I GA+++ KPV L ++
Sbjct: 410 TARSRPEDIENGFRAGANDYLTKPVNLLEL 439
>dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 66.6 bits (161), Expect = 2e-09
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ RK++ LL+ S++V++ G +A + L +
Sbjct: 33 VLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNN---------------- 76
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++T+ +P ++GY LL + E S + IPV++MSS + + C+ +GA +F
Sbjct: 77 ----IDLVLTEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADF 132
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ--------EQHQQSDSHSGERRNPTISSSDSINNRK 765
+KP+R +++ L H+ + + E S+ +S + S+ N
Sbjct: 133 LVKPIRKNELRNLWQHVWRRQSANGAENTPPVENETNSEYNSASNHSSYYMDSNHKNKGS 192
Query: 766 RKGAGTE 786
KG T+
Sbjct: 193 EKGNDTQ 199
>gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 (Pseudo-response
regulator 5)
Length = 558
Score = 66.2 bits (160), Expect = 3e-09
Identities = 38/137 (27%), Positives = 73/137 (53%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R++I LL+ S++V V G KA + L
Sbjct: 52 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEML--------------------KG 91
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +V+LI+T+ +P ++GY LL I E ++IPV++MS+++ + + +C+ +GA ++
Sbjct: 92 KPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADY 151
Query: 610 FLKPVRLSDMNKLKPHI 660
+KP+R +++ L H+
Sbjct: 152 LVKPLRRNELRNLWQHV 168
>dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 66.2 bits (160), Expect = 3e-09
Identities = 40/155 (25%), Positives = 78/155 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD K++E++LK S++VTT +AL+ L
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL--------------------RE 52
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +++I+D MP M G+ LL+ + D+PV++MS + SR+ + ++ GA ++
Sbjct: 53 RKDGYDIVISDVNMPDMDGFKLLEHVGLEL---DLPVIMMSVDGETSRVMKGVQHGACDY 109
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG 714
LKP+R+ ++ + H+L+ + + + + + G
Sbjct: 110 LLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEG 144
>ref|ZP_00768957.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Chloroflexus aurantiacus J-10-fl]
gb|EAO57937.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Chloroflexus aurantiacus J-10-fl]
Length = 753
Score = 66.2 bits (160), Expect = 3e-09
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Frame = +1
Query: 169 APILPC----SSAAALFRSVMAAVATETPFH---VLAVDDSLPDRKLIERLLKTSSFQVT 327
APIL +A + +VM A TP H +L VDDS+ R L + +L+ + ++V
Sbjct: 599 APILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSITTRTLEKNILEAAGYRVV 658
Query: 328 TVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKI 507
G +AL+ L H L NQ L+++D MP + G+DL ++I
Sbjct: 659 LATDGQEALERL--------------HNLQ---NQG-GCQLVLSDIDMPRLNGFDLTRQI 700
Query: 508 KESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLK 618
+ + R +PVV+++S + P+ R L GAD + +K
Sbjct: 701 RTDPAFRHLPVVLVTSLDSPADRERGLAAGADAYIVK 737
>ref|ZP_00671488.1| Guanylate cyclase:Response regulator receiver [Trichodesmium
erythraeum IMS101]
gb|EAO29650.1| Guanylate cyclase:Response regulator receiver [Trichodesmium
erythraeum IMS101]
Length = 351
Score = 66.2 bits (160), Expect = 3e-09
Identities = 42/144 (29%), Positives = 70/144 (48%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
+VL VDD+ +R L+ R +K +++ G +AL+ + H D
Sbjct: 7 NVLVVDDNQFNRDLLARRVKRQGHMISSASDGFQALEMVRNHSFD--------------- 51
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
L++ D MP M GY +L+ +K +LR IPV+++S+ + I RC+E GA++
Sbjct: 52 -------LVLLDIMMPQMNGYQVLETLKADPALRHIPVIMISAVDDIDSIVRCIELGAED 104
Query: 607 FFLKPVRLSDMNKLKPHILKSRCN 678
+ KP P +LK+R N
Sbjct: 105 YLSKP--------FNPILLKARIN 120
>ref|NP_176938.1| ARR11 (RESPONSE REGULATOR 11); transcription factor/ two-component
response regulator [Arabidopsis thaliana]
gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gb|AAG28891.1| F12A21.15 [Arabidopsis thaliana]
sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 (Receiver-like protein 3)
Length = 521
Score = 66.2 bits (160), Expect = 3e-09
Identities = 40/155 (25%), Positives = 78/155 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD K++E++LK S++VTT +AL+ L
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL--------------------RE 52
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +++I+D MP M G+ LL+ + D+PV++MS + SR+ + ++ GA ++
Sbjct: 53 RKDGYDIVISDVNMPDMDGFKLLEHVGLEL---DLPVIMMSVDGETSRVMKGVQHGACDY 109
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG 714
LKP+R+ ++ + H+L+ + + + + + G
Sbjct: 110 LLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEG 144
>ref|NP_568446.1| APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator
[Arabidopsis thaliana]
dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
Length = 667
Score = 66.2 bits (160), Expect = 3e-09
Identities = 38/137 (27%), Positives = 73/137 (53%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+ R++I LL+ S++V V G KA + L
Sbjct: 161 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEML--------------------KG 200
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +V+LI+T+ +P ++GY LL I E ++IPV++MS+++ + + +C+ +GA ++
Sbjct: 201 KPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADY 260
Query: 610 FLKPVRLSDMNKLKPHI 660
+KP+R +++ L H+
Sbjct: 261 LVKPLRRNELRNLWQHV 277
>ref|ZP_00505311.1| PAS domain [Polaromonas sp. JS666]
gb|EAM40171.1| PAS domain [Polaromonas sp. JS666]
Length = 1049
Score = 66.2 bits (160), Expect = 3e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Frame = +1
Query: 238 TPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
+P +L V+DS + ++ +L+ ++V +G AL+ L
Sbjct: 10 SPVKILIVEDSPTQAQQLQHILEQEGYEVGIARNGRLALKML------------------ 51
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
LII+D MP M GY+L ++IK LR+IPV+++++ + P + R LE G
Sbjct: 52 ----PQFRPALIISDVIMPEMDGYELSRRIKTQPDLRNIPVILVTTMSDPQDVIRGLECG 107
Query: 598 ADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG 714
AD F LKP D + + N+E H++ D G
Sbjct: 108 ADNFVLKPY---DERYMLARVRYVLVNREMHREQDMGLG 143
Score = 49.3 bits (116), Expect = 4e-04
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +R L+ R + + + +G +AL A
Sbjct: 797 VLLVDDHPVNRMLLMRQVHVLGYAAESAKNGVEAL----------------------AKW 834
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRD---IPVVIMSSENIPSRINRCLEEGA 600
Q ++ITD MP M GYDL + I+ S + +P++ ++ + C G
Sbjct: 835 QSRRFGIVITDCNMPEMNGYDLARSIRGLESGNEGKHVPIIACTANALSGEAESCFAAGM 894
Query: 601 DEFFLKPVRLSDMNK 645
D++ +KPV LS + +
Sbjct: 895 DDYLVKPVELSQLRE 909
>ref|YP_470029.1| two-component response regulator protein [Rhizobium etli CFN 42]
gb|ABC91302.1| two-component response regulator protein [Rhizobium etli CFN 42]
Length = 262
Score = 65.9 bits (159), Expect = 4e-09
Identities = 43/143 (30%), Positives = 72/143 (50%)
Frame = +1
Query: 193 AAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLH 372
A L + T HVL VDDS R L+ LK +F+V+T ++G+KAL+ L
Sbjct: 111 AVDLLAESICRFLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEIL--- 167
Query: 373 DQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMS 552
AN+D + L+ITDY MP + G++L ++I+ + ++ ++ +S
Sbjct: 168 ----------------KANRD--IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVS 209
Query: 553 SENIPSRINRCLEEGADEFFLKP 621
S + R L+ G ++F L+P
Sbjct: 210 SSSNRLLSARFLKAGGNDFMLRP 232
>ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 65.9 bits (159), Expect = 4e-09
Identities = 37/126 (29%), Positives = 64/126 (50%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+LAVDD + +++E L S +QVT S ++A +L
Sbjct: 7 HLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYL--------------------T 46
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
N D ++++ D+ MP + G +LLKK KE + + +P +++S + PS I++ L GA
Sbjct: 47 NADYQFDVLLLDWVMPDVDGLELLKKAKELENYKHVPAIMISGLSAPSAISKGLNAGAFY 106
Query: 607 FFLKPV 624
+ KP+
Sbjct: 107 YLTKPL 112
>ref|YP_477370.1| response regulator [Cyanobacteria bacterium Yellowstone B-Prime]
gb|ABD02107.1| response regulator [Cyanobacteria bacterium Yellowstone B-Prime]
Length = 339
Score = 65.9 bits (159), Expect = 4e-09
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDD R L+ LL++ ++V+ +SG++ALQ L D
Sbjct: 23 HLLIVDDQPNSRLLLGDLLQSIGYRVSEAESGNQALQMLKTFQPD--------------- 67
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
LI+ D MPG+ G+++ ++IK + R IPVV++++ + R +E GAD+
Sbjct: 68 -------LILLDVMMPGLDGFEVCRRIKANDETRLIPVVLVTAASDHKNRVRGIEAGADD 120
Query: 607 FFLKPVRLSD-MNKLKPHILKSRCNQEQHQQSD-----SHSGERRNPT 732
F KP S+ + +++ + + N++ + + S E R+PT
Sbjct: 121 FLSKPFDESELLARVRSLVRQKHLNEDLDHAAQVLFAIARSVESRDPT 168
>gb|ABB38373.1| response regulator receiver domain protein (CheY-like)
[Desulfovibrio desulfuricans G20]
ref|YP_388068.1| response regulator receiver domain protein (CheY-like)
[Desulfovibrio desulfuricans G20]
Length = 123
Score = 65.9 bits (159), Expect = 4e-09
Identities = 39/133 (29%), Positives = 65/133 (48%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDDS R L+ ++K F+VT + G L+ L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLEKL--------------------Y 43
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ + V+LII+D MP M G+ +K ++E + RD+P+V++S+E I + GA+
Sbjct: 44 SAEETVDLIISDVNMPRMDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANL 103
Query: 607 FFLKPVRLSDMNK 645
+ +KP + M K
Sbjct: 104 YMVKPAQPDKMVK 116
>gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
Length = 636
Score = 65.5 bits (158), Expect = 5e-09
Identities = 37/141 (26%), Positives = 73/141 (51%)
Frame = +1
Query: 238 TPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
T VL V+ R +I LL+ ++V V G KA + L
Sbjct: 12 TMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETL------------------ 53
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
N+ + ++L++T+ +P ++G+ LL +I + + ++IP+++MSS++ S + + + G
Sbjct: 54 --KNKSLDIDLVLTEVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNG 111
Query: 598 ADEFFLKPVRLSDMNKLKPHI 660
A +F +KPVR +++ L H+
Sbjct: 112 AVDFLIKPVRRNELRNLWQHV 132
>dbj|BAB72596.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_484682.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 820
Score = 65.5 bits (158), Expect = 5e-09
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDD +R ++ LL+ F +T ++G L L H D
Sbjct: 617 HILVVDDRWENRAVLLNLLEPLGFIITEAENGQAGLDQLQQHLPD--------------- 661
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
L+ITD MP M G+++L+KI+E LR + +++ S+ ++ G D+
Sbjct: 662 -------LVITDLVMPVMDGFEMLRKIREQEQLRSLKILVSSASVAQIDQQMSIDAGGDD 714
Query: 607 FFLKPVRLSDM-NKLKPHI-LKSRCNQEQHQQSD 702
F KPV+++D+ L+ H+ L + H+ +D
Sbjct: 715 FLAKPVQVNDLFTLLEKHLELTWKTEDITHKSAD 748
>emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 65.1 bits (157), Expect = 6e-09
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V++ R ++ LL+ S++V +G +A + L ++ H
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL---------EDLNNH------- 123
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++++T+ MP ++G LL KI S R+IPV++MSS + + +CL +GA +F
Sbjct: 124 ----IDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDF 179
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQS---DSHSGERRNPTISSSDSINN 759
+KP+R +++ L H S HQ S S ++ + SSD N
Sbjct: 180 LVKPIRKNELKILWQHSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENEN 232
>ref|YP_504163.1| response regulator receiver domain protein (CheY-like)
[Methanospirillum hungatei JF-1]
gb|ABD42444.1| response regulator receiver domain protein (CheY-like)
[Methanospirillum hungatei JF-1]
Length = 436
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/129 (28%), Positives = 62/129 (48%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
+T H+L V+D+ + + LL+ QVT +G +AL+ +
Sbjct: 6 DTSLHILIVEDNRTQAEYLRHLLEKRGHQVTVSQNGFEALERI----------------- 48
Query: 415 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
++ ++I+TD MP M GY L K +K+ DIPV++++ P + + LE
Sbjct: 49 -----EEKRPDIILTDVMMPDMDGYTLCKTVKQHEKFHDIPVILVTHLYSPVDVIKGLEA 103
Query: 595 GADEFFLKP 621
GAD F +KP
Sbjct: 104 GADNFIIKP 112
>emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 65.1 bits (157), Expect = 6e-09
Identities = 40/155 (25%), Positives = 77/155 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD K++E++LK S++VTT +AL+ L
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL--------------------RE 52
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +++I+D MP M G+ LL+ + D+PV++MS + SR+ + + GA ++
Sbjct: 53 RKDGYDIVISDVNMPDMDGFKLLEHVGLEL---DLPVIMMSVDGETSRVMKGVHTGACDY 109
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSG 714
LKP+R+ ++ + H+L+ + + + + + G
Sbjct: 110 LLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEG 144
>gb|AAS96546.1| chemotaxis protein CheY [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough]
ref|YP_011286.1| chemotaxis protein CheY [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough]
Length = 122
Score = 65.1 bits (157), Expect = 6e-09
Identities = 39/133 (29%), Positives = 65/133 (48%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDDS R L+ ++K F+VTT + G L+ L +
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSSE----------------- 46
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
V+LII+D MP M G+ +K ++E + R++P+V++S+E I + GA+
Sbjct: 47 ----GVDLIISDVNMPRMDGFTFIKTVREQDTYRNLPIVVLSTEGQEKDIQMGMSLGANL 102
Query: 607 FFLKPVRLSDMNK 645
+ +KP + M K
Sbjct: 103 YMVKPAQPEKMVK 115
>emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes]
ref|NP_907061.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes DSM
1740]
Length = 1555
Score = 64.7 bits (156), Expect = 8e-09
Identities = 46/155 (29%), Positives = 72/155 (46%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVL VDD+ +K++ RLLK +V+ SG +AL+ +
Sbjct: 1091 HVLIVDDTPSWQKILARLLKGFHIEVSVASSGEEALRLI--------------------K 1130
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
Q +LI+ D+ MP M G + K IKES ++++SS + +N E+G +
Sbjct: 1131 EQPGFYDLILMDWKMPQMDGIETTKLIKESCETPPPTIIMVSSYRQENIVNAAKEQGINV 1190
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHS 711
F KP+ S + + IL Q Q++DSHS
Sbjct: 1191 FLQKPINPSLLYNVLLEILGEGIKQSGVQKADSHS 1225
Score = 42.0 bits (97), Expect = 0.059
Identities = 36/182 (19%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Frame = +1
Query: 211 SVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTV 390
S+ + T +L V+D+ +R++I +L+ ++ +G +A+ L+ ++
Sbjct: 1225 SLKNELTTRAGSQILLVEDNAMNREIIMGMLQPFGIRIDIAQNGQEAVT---LYQENPK- 1280
Query: 391 PPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPS 570
LI+ D MP M GY+ K ++ + ++P++ +++ + S
Sbjct: 1281 ----------------RYELILMDIQMPVMDGYEATKILRAQGA--NLPIIALTANAMKS 1322
Query: 571 RINRCLEEGADEFFLKPVRLSDM-NKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSD 747
I R G DE KP+ + + L H+ QE + PT+ +D
Sbjct: 1323 DIERTKAAGMDEHLNKPIVVEKLFGTLLAHLTPKCAPQENPSLAPQELQSSTLPTLVHTD 1382
Query: 748 SI 753
++
Sbjct: 1383 TL 1384
>ref|ZP_01135093.1| putative response regulator [Pseudoalteromonas tunicata D2]
gb|EAR27470.1| putative response regulator [Pseudoalteromonas tunicata D2]
Length = 551
Score = 64.7 bits (156), Expect = 8e-09
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD +R L+ +LK ++V +V++G AL +
Sbjct: 3 ILVVDDQQLNRTLLTFMLKAEGYEVESVENGQLALDII---------------------- 40
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
D ++I+ D MP + GY++ KIKE S +P++ +++ + + + RCLE G D+F
Sbjct: 41 PDYQPDIILLDVLMPVLNGYEVAPKIKEMSQDVYLPIIFITALDDQNSLQRCLEVGGDDF 100
Query: 610 FLKPV-RLSDMNKLKPHILKSRCNQEQHQQS 699
KP ++ K+K H +++ +QQ+
Sbjct: 101 LSKPFDKVILSAKIKAHSRTRELSKKAYQQN 131
>dbj|BAC50388.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
ref|NP_771763.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
Length = 457
Score = 64.3 bits (155), Expect = 1e-08
Identities = 39/125 (31%), Positives = 63/125 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + KL+E L F V T +G++AL A +
Sbjct: 5 ILVVDDVPANVKLLEARLSAEYFDVMTASNGTEAL----------------------AIS 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ ++I+ D MP M G+++ +++K + IPVV++++ + PS NR LE GAD+F
Sbjct: 43 RRAECDIILLDVMMPDMDGFEVCRRLKTDPATHHIPVVMVTALDSPSDRNRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>emb|CAC48744.1| putative regulatory protein [Sinorhizobium meliloti 1021]
ref|NP_436884.1| putative regulatory protein [Sinorhizobium meliloti 1021]
Length = 520
Score = 64.3 bits (155), Expect = 1e-08
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +1
Query: 193 AAALFRSVMAAVATETPFH---VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFL 363
AA L R + A P +L VDD +R L+ R L+ +V T +SG AL L
Sbjct: 159 AAGLERLLFKAQEVACPEQGGRILVVDDVASNRDLLSRRLRREGHRVVTAESGLSALARL 218
Query: 364 GLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVV 543
+ D LI+ D MP M G ++L ++K + +PV+
Sbjct: 219 AEDEFD----------------------LILLDILMPDMNGIEMLSRLKSEERWQHVPVI 256
Query: 544 IMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCN 678
++S + + + RC+E GAD++ KP P +L++R N
Sbjct: 257 MISGLSDVTAVARCIEAGADDYLTKP--------FNPILLRARIN 293
>gb|AAX62130.1| response regulator protein [Bacillus thuringiensis phage MZTP02]
Length = 342
Score = 63.9 bits (154), Expect = 1e-08
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD---QDSTVPPVHTHQLDV 420
+L VDDS RK+IE L+T+ + V T G + L+ + D Q+ +P
Sbjct: 203 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGF----- 257
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
VN +ITD MP M G LLK+++++ S +++P+V+ SS + L+ GA
Sbjct: 258 -------VNAVITDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGA 310
Query: 601 DEFFLKPVRLSDMNKLKPHIL 663
++ KP + M + H+L
Sbjct: 311 NDTITKP-EIGRMVGMMDHML 330
>ref|ZP_00564123.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Methylobacillus flagellatus KT]
gb|EAN03715.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Methylobacillus flagellatus KT]
Length = 1643
Score = 63.9 bits (154), Expect = 1e-08
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Frame = +1
Query: 211 SVMAAVATETPFHV-----LAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 375
S+ AV TP + L VDDSL RK++ R L+ ++V T G +ALQ +
Sbjct: 1509 SLNVAVTAATPLPLGKPVALLVDDSLTMRKVLGRFLEREGYEVVTAKDGMEALQAM---- 1564
Query: 376 QDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSS 555
++P V I+TD MP M G++L + +++ R IP+VI+SS
Sbjct: 1565 -QQSLPAV-----------------IVTDIEMPRMDGFELARNVRDDERTRHIPLVIVSS 1606
Query: 556 ENIPSRINRCLEEGADEFFLKPVRLSDM 639
G D FF KPV+ ++
Sbjct: 1607 RTAEKHQTLAKSLGVDAFFGKPVQEEEL 1634
>gb|AAK87409.1| AGR_C_3010p [Agrobacterium tumefaciens str. C58]
ref|NP_354624.1| hypothetical protein AGR_C_3010 [Agrobacterium tumefaciens str.
C58]
Length = 304
Score = 63.5 bits (153), Expect = 2e-08
Identities = 40/125 (32%), Positives = 64/125 (51%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVL VDDS R L+ LK +F+V+ DSG+KAL+ L A
Sbjct: 170 HVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEIL-------------------RA 210
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
N D + L++TDY MP + G++L ++I+ ++ ++ +SS R L+ G ++
Sbjct: 211 NPD--IGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGND 268
Query: 607 FFLKP 621
F L+P
Sbjct: 269 FMLRP 273
>emb|CAH09993.1| putative two-component system sensor kinase/response regulator fusion
protein [Bacteroides fragilis NCTC 9343]
ref|YP_213882.1| putative two-component system sensor kinase/response regulator fusion
protein [Bacteroides fragilis NCTC 9343]
Length = 917
Score = 63.5 bits (153), Expect = 2e-08
Identities = 42/161 (26%), Positives = 77/161 (47%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
+HVL V+D PD + R +++FQV +G++AL LG D
Sbjct: 665 YHVLVVEDD-PDVRYSLRKELSANFQVEVAGNGNEALDLLGQGD---------------- 707
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
A +LI++D MPGM G+ L+ ++K + IP++++++ + S+ + EGAD
Sbjct: 708 -----AFHLILSDVLMPGMNGFQLVNRVKNDLAFSHIPIILLTALSEDSQRIYGIAEGAD 762
Query: 604 EFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRN 726
E+ KP + + +I+ R ++ + +G N
Sbjct: 763 EYIPKPFNIDFLKIRIINIIAERQKMKEIYMKNLQAGTMDN 803
>gb|AAL42633.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
ref|NP_532317.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
Length = 249
Score = 63.5 bits (153), Expect = 2e-08
Identities = 40/125 (32%), Positives = 64/125 (51%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVL VDDS R L+ LK +F+V+ DSG+KAL+ L A
Sbjct: 115 HVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEIL-------------------RA 155
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
N D + L++TDY MP + G++L ++I+ ++ ++ +SS R L+ G ++
Sbjct: 156 NPD--IGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGND 213
Query: 607 FFLKP 621
F L+P
Sbjct: 214 FMLRP 218
>gb|AAZ37468.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
ref|YP_273433.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 705
Score = 63.5 bits (153), Expect = 2e-08
Identities = 39/136 (28%), Positives = 67/136 (49%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
T++ +L +DD + R L+E LL+ ++ T +SG L + L D
Sbjct: 2 TQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD---------- 51
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE
Sbjct: 52 ------------LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLE 99
Query: 592 EGADEFFLKPVRLSDM 639
GA+E+ KPV +++
Sbjct: 100 AGAEEYLNKPVDSAEL 115
>gb|ABB30744.1| response regulator receiver domain protein (CheY-like) [Geobacter
metallireducens GS-15]
ref|YP_383469.1| response regulator receiver domain protein (CheY-like) [Geobacter
metallireducens GS-15]
Length = 141
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/125 (24%), Positives = 67/125 (53%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L D+ R + + L+K++ ++ D+G +AL++ +
Sbjct: 12 ILIEDEPGHTRLITKNLMKSADVEILPFDTGRRALEYF-----------------EGKTA 54
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+D+ +L++ D MPG+ G+++LK++K + + +PV++ ++ + P I RC EGA+ +
Sbjct: 55 EDLRQHLVVLDINMPGIDGFEVLKRLKGNEATAAVPVIVFTTTDHPDEIRRCYHEGANLY 114
Query: 610 FLKPV 624
+KP+
Sbjct: 115 LVKPM 119
>ref|NP_566561.2| ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/
two-component response regulator [Arabidopsis thaliana]
dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1
Length = 690
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD ++ER+L+T ++VT + AL L + H D+
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNK----------HGFDI--- 85
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+D MP M G+ LL+ + D+PV++MS+++ S + + + GA ++
Sbjct: 86 -------VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDY 135
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ---EQHQQSDSHSGERR 723
+KPVR+ + + H+++ R ++ +H S +GER+
Sbjct: 136 LIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176
>gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD ++ER+L+T ++VT + AL L + H D+
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNK----------HGFDI--- 85
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+D MP M G+ LL+ + D+PV++MS+++ S + + + GA ++
Sbjct: 86 -------VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDY 135
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ---EQHQQSDSHSGERR 723
+KPVR+ + + H+++ R ++ +H S +GER+
Sbjct: 136 LIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176
>ref|ZP_00109094.1| COG4585: Signal transduction histidine kinase [Nostoc punctiforme
PCC 73102]
Length = 371
Score = 63.5 bits (153), Expect = 2e-08
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD+L + +L+ +L ++V +V +GS AL +G+ Q PP
Sbjct: 11 ILIVDDTLDNLRLLSAMLTEQGYEVRSVTNGSMAL--IGIQAQ----PP----------- 53
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+LI+ D MPGM GY++ +++K + ++IPV+ +S+ N + G +F
Sbjct: 54 -----DLILLDITMPGMNGYEVCQRLKSNPQTQEIPVIFISALNEVFDKVKAFSVGGVDF 108
Query: 610 FLKPVRLSDMNKLKPHILKSRCN-----QEQHQQSDSHSGERRNPTISSSDSINNRKRKG 774
KP ++ ++ H LK C QEQ+++ E R ++ ++N R +
Sbjct: 109 INKPFQIEEVVARMEHQLK-LCRLQMQLQEQNRRLQETEAELRR-SLDHQKALNQRIEEM 166
Query: 775 AGTEE 789
EE
Sbjct: 167 VALEE 171
>dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD ++ER+L+T ++VT + AL L + H D+
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNK----------HGFDI--- 85
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+D MP M G+ LL+ + D+PV++MS+++ S + + + GA ++
Sbjct: 86 -------VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDY 135
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ---EQHQQSDSHSGERR 723
+KPVR+ + + H+++ R ++ +H S +GER+
Sbjct: 136 LIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176
>ref|NP_850600.2| ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/
two-component response regulator [Arabidopsis thaliana]
Length = 669
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD ++ER+L+T ++VT + AL L + H D+
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNK----------HGFDI--- 85
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+D MP M G+ LL+ + D+PV++MS+++ S + + + GA ++
Sbjct: 86 -------VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDY 135
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ---EQHQQSDSHSGERR 723
+KPVR+ + + H+++ R ++ +H S +GER+
Sbjct: 136 LIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176
>gb|EAR86994.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 828
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/138 (26%), Positives = 66/138 (47%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
HVL +D R + +L +QVT V++G A D
Sbjct: 10 HVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLAR--------------------DELL 49
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
D +++++ D MP M G +LL ++E L+ IPV++MS +N R+ C+ GA +
Sbjct: 50 KADSNIDIVLLDLYMPEMDGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKD 109
Query: 607 FFLKPVRLSDMNKLKPHI 660
+ +KP+R+ ++ L ++
Sbjct: 110 YLVKPLRIQNVKGLAKYV 127
>ref|NP_296368.1| CheA-related protein [Deinococcus radiodurans R1]
Length = 645
Score = 63.5 bits (153), Expect = 2e-08
Identities = 36/125 (28%), Positives = 59/125 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDSL R+L+ R+L+ +QV T G +AL L
Sbjct: 520 LLLVDDSLSVRRLVGRMLERGGYQVVTASDGQEALDLL---------------------Q 558
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
QD ++TD MP + GY+LL ++ + +P+++M++ + GAD++
Sbjct: 559 QDADFGAVVTDLEMPRVNGYELLSAVRARPATAGLPMLVMTTRAGEKHQRLAFQLGADDY 618
Query: 610 FLKPV 624
F KPV
Sbjct: 619 FTKPV 623
>dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 63.2 bits (152), Expect = 2e-08
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL + VTT + AL+ L
Sbjct: 28 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL--------------------RE 67
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +L+I+D MP M G+ LL+ + D+PV+++S+ + + + GA ++
Sbjct: 68 KKDQFDLVISDVHMPDMDGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDY 124
Query: 610 FLKPVRLSDMNKLKPHILKSR-CNQEQHQQSDSHSGERRNPTISSSDS--INNRKR 768
LKPVR+ + + H+++ R C+ + + SG++ D+ +N KR
Sbjct: 125 LLKPVRIEQLRTIWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSVEGDNGGVNRNKR 180
>dbj|BAD51273.1| two-component system sensor histidine kinase/response regulator
hybrid [Bacteroides fragilis YCH46]
ref|YP_101807.1| two-component system sensor histidine kinase/response regulator
hybrid [Bacteroides fragilis YCH46]
Length = 918
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/161 (25%), Positives = 77/161 (47%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
+HVL V+D PD + R +++FQV +G++AL LG D
Sbjct: 665 YHVLVVEDD-PDVRYSLRKELSANFQVEVAGNGNEALDLLGQGD---------------- 707
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
A +LI++D MPGM G+ L+ ++K + IP++++++ + S+ + EGAD
Sbjct: 708 -----AFHLILSDVLMPGMNGFQLVNRVKNDLAFSHIPIILLTALSEDSQRIYGIAEGAD 762
Query: 604 EFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRN 726
E+ KP + + +++ R ++ + +G N
Sbjct: 763 EYIPKPFNIDFLKIRIINMISERQKMKEAYMKNLRAGTMDN 803
>ref|ZP_00819634.1| Response regulator receiver:CheW-like protein [Marinobacter
aquaeolei VT8]
gb|EAO97175.1| Response regulator receiver:CheW-like protein [Marinobacter
aquaeolei VT8]
Length = 309
Score = 62.8 bits (151), Expect = 3e-08
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Frame = +1
Query: 214 VMAAVATETPFH--VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDST 387
++A A P H VL VDDS R+ IER L +V T + G +AL +L QD +
Sbjct: 169 LVARSAERVPGHLPVLVVDDSSVARRQIERCLTAIGMEVVTKNDGKQALHYLKEITQDGS 228
Query: 388 VPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIP 567
H ++LII+D MP M GY L+ +IKE +L+D+ V++ +S +
Sbjct: 229 RANDH-------------LSLIISDVEMPEMDGYTLVTRIKEDPALKDMYVMLHTS--LS 273
Query: 568 SRINRCLEE--GADEFFLK 618
NR + + GAD+F K
Sbjct: 274 GVFNRAMVQKVGADDFMAK 292
>gb|AAL42303.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
gb|AAK87090.1| AGR_C_2387p [Agrobacterium tumefaciens str. C58]
ref|NP_531987.1| two component response regulator [Agrobacterium tumefaciens str.
C58]
ref|NP_354305.1| hypothetical protein AGR_C_2387 [Agrobacterium tumefaciens str.
C58]
Length = 456
Score = 62.8 bits (151), Expect = 3e-08
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD + KL+E L F V T + G KAL A
Sbjct: 5 VLVVDDIPANVKLLEARLVAEYFDVVTAEDGFKAL----------------------AIC 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ V++I+ D MPGM G+++ +++K + + IPVV++++ + PS R L+ GAD+F
Sbjct: 43 DEEQVDIILLDIMMPGMDGFEVCERLKANPNTAHIPVVMVTALDQPSDRVRGLKAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>pir||T02680 hypothetical protein At2g46790 [imported] - Arabidopsis thaliana
Length = 454
Score = 62.8 bits (151), Expect = 3e-08
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
+T VL V+ R++I LL+ ++ G F+ L S
Sbjct: 34 KTVLRVLLVESDYSTRQIITALLRKCCYK------GRLVFPFISLFVAVSD----GLAAW 83
Query: 415 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
+V + ++LI+T+ +P ++G+ LL + E + ++IPV++MSS++ + +C+
Sbjct: 84 EVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLR 143
Query: 595 GADEFFLKPVRLSDMNKLKPHI---LKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRK 765
GA ++ +KP+R +++ L H+ L R + H QS S T + +
Sbjct: 144 GAADYLIKPMRKNELKNLWQHVWRRLTLRDDPTAHAQSLPASQHNLEDTDETCEDSRYHS 203
Query: 766 RKGAGTEEI 792
+G+G + I
Sbjct: 204 DQGSGAQAI 212
>ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum]
gb|AAB03508.1| RegA [Dictyostelium discoideum]
emb|CAA06513.1| RegA [Dictyostelium discoideum]
sp|Q23917|REGA_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA)
gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum]
Length = 793
Score = 62.8 bits (151), Expect = 3e-08
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD RK++ LLK + VT V +G A +++ Q
Sbjct: 162 ILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQK---------------- 205
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR-INRCLEEGADE 606
+L++TD MP +TG+DLL++I + R IPV++MS + + N ++ G +
Sbjct: 206 ----YDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQD 261
Query: 607 FFLKPVRLSDMNKLKPHILKS---RCNQEQHQQSDSHSGERRN 726
F KP+ + K +L+S R +E+++ + + E+ N
Sbjct: 262 FLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQEREKGN 304
>gb|EAN28205.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like [Magnetococcus sp. MC-1]
ref|ZP_00607425.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like [Magnetococcus sp. MC-1]
Length = 459
Score = 62.8 bits (151), Expect = 3e-08
Identities = 38/124 (30%), Positives = 61/124 (49%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDDS+ R L + +L+ F VTT +G K + L
Sbjct: 338 HILVVDDSITTRTLEKNILEAKGFLVTTAVNGQKGWETL--------------------- 376
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
Q+ +L+I+D MP M G++ + I++ S D+PV+I+SS + R +E GAD
Sbjct: 377 -QEGQFDLVISDVEMPIMNGFEFARTIRDDSRYDDLPVIIVSSLDSQENKRRGMEAGADA 435
Query: 607 FFLK 618
+ +K
Sbjct: 436 YIVK 439
>gb|AAR34364.1| sensory box histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_952091.1| sensory box histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 513
Score = 62.8 bits (151), Expect = 3e-08
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Frame = +1
Query: 208 RSVMAAVATET-PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDS 384
+ VM A E P +L VDD RK++ L S ++V + G++A++
Sbjct: 8 KHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMF------- 60
Query: 385 TVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENI 564
++++ +L++ D MP M GY I+ +P++IM++ +
Sbjct: 61 ---------------RELSPDLVLLDIMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDD 105
Query: 565 PSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSS 744
+ I R + GA +F KPV +N P++L++R Q+S++ S ++
Sbjct: 106 ANSIGRAFDAGATDFIEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGELMALL 165
Query: 745 DSINN 759
+SIN+
Sbjct: 166 NSIND 170
>ref|ZP_00766223.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chloroflexus
aurantiacus J-10-fl]
gb|EAO60777.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chloroflexus
aurantiacus J-10-fl]
Length = 537
Score = 62.4 bits (150), Expect = 4e-08
Identities = 35/127 (27%), Positives = 65/127 (51%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+D + LI L+ ++V V+SG +AL ++
Sbjct: 420 LLMVEDDVASATLIADYLRRCGYRVVHVESGEEALAYI---------------------- 457
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
Q LI+ D + M+G+++++ ++ + RD+PV+++++ +P RCLE GADE+
Sbjct: 458 QGELPCLILLDVRLRTMSGFEVMQHLRSQVATRDLPVLVLTALAMPGDRERCLEAGADEY 517
Query: 610 FLKPVRL 630
KP+RL
Sbjct: 518 LAKPIRL 524
>ref|NP_194920.1| ARR10 (ARABIDOPSIS RESPONSE REGULATOR 10); transcription factor/
two-component response regulator [Arabidopsis thaliana]
emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
sp|O49397|ARR10_ARATH Two-component response regulator ARR10 (Receiver-like protein 4)
emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
Length = 552
Score = 62.4 bits (150), Expect = 4e-08
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD ++++ LL+ + VTT + AL+ L +
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNK---------------- 62
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L+I+D MP M G+ LL+ + D+PV+++S+ + P + + ++ GA ++
Sbjct: 63 ----FDLVISDVDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVKHGACDY 115
Query: 610 FLKPVRLSDMNKLKPHIL-KSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTE 786
LKPVR+ ++ + H++ KS+ + + S+ S + NRKRK E
Sbjct: 116 LLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNG----------SGNCDKANRKRKEQYEE 165
Query: 787 E 789
E
Sbjct: 166 E 166
>ref|YP_475726.1| response regulator [Cyanobacteria bacterium Yellowstone A-Prime]
gb|ABD00463.1| response regulator [Cyanobacteria bacterium Yellowstone A-Prime]
Length = 344
Score = 62.4 bits (150), Expect = 4e-08
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDD R L+ LL++ ++V+ ++G +ALQ L D
Sbjct: 28 HLLIVDDQPHSRLLLGDLLESIGYRVSEAENGQQALQMLPSLQPD--------------- 72
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
L++ D MPG+ G+++ ++IK R IPVV++++ + R +E GAD+
Sbjct: 73 -------LVLLDVMMPGLDGFEVCRRIKADEETRLIPVVLIAAASDRKNRLRGIEAGADD 125
Query: 607 FFLKPVRLSD-MNKLKPHILKSRCNQEQHQQSD-----SHSGERRNPT 732
F KP S+ + +++ + + N++ + + S E R+PT
Sbjct: 126 FLSKPFDESELLARVRSLVRQKHLNEDLDHAAQVLFAIARSVESRDPT 173
>ref|ZP_00859928.1| GGDEF [Bradyrhizobium sp. BTAi1]
gb|EAP30389.1| GGDEF [Bradyrhizobium sp. BTAi1]
Length = 472
Score = 62.4 bits (150), Expect = 4e-08
Identities = 39/125 (31%), Positives = 62/125 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + KL+E L F V T +G++ALQ
Sbjct: 5 ILVVDDVPANVKLLEARLSAEYFDVLTASNGAEALQIC---------------------- 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
Q ++I+ D MP M G+++ +++K + + IPVV++++ + PS R LE GAD+F
Sbjct: 43 QRAECDIILLDVMMPDMDGFEVCRRLKSNPATHFIPVVMVTALDSPSDRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
Score = 35.8 bits (81), Expect = 4.2
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Frame = +1
Query: 406 HQLDVAANQDVAV--------NLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSEN 561
H +DV N AV +L+I + G L +++ R +P++ ++
Sbjct: 179 HSVDVEPNPSEAVFNAAEGNYDLVIVSLDLDDFDGLRLCSQLRSLERTRHVPILAIAEAE 238
Query: 562 IPSRINRCLEEGADEFFLKPVRLSD-MNKLKPHILKSR 672
+R+ R LE G +++ L+PV ++ M + + I K R
Sbjct: 239 NNTRLLRGLEIGVNDYLLRPVDKNELMARARTQIRKRR 276
>gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 62.4 bits (150), Expect = 4e-08
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Frame = +1
Query: 190 SAAALFRSVMAAVATETP--FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFL 363
S++A ++S V+ + P VL VDD +++E++LK ++VT + AL+ L
Sbjct: 16 SSSASWKSGGDGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLL 75
Query: 364 GLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVV 543
+ +++I+D MP M G+ LL+++ D+PV+
Sbjct: 76 --------------------RDNRNGYDIVISDVHMPDMDGFKLLEQVGLEM---DLPVI 112
Query: 544 IMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHIL---KSRCNQEQHQQSDS-HS 711
+MS+++ + + + + GA ++ +KPVR+ + + H++ K ++ ++QS S
Sbjct: 113 MMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKGKHEWKEKDYEQSGSVED 172
Query: 712 GERR---NPTISSSDSI------NNRKRK 771
GER+ N + S S N++KRK
Sbjct: 173 GERQQKPNEDVDYSSSANEGNWKNSKKRK 201
>ref|ZP_00674273.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
gb|EAO26881.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal:Cache [Trichodesmium erythraeum
IMS101]
Length = 1130
Score = 62.4 bits (150), Expect = 4e-08
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
FH+L VDD + +++ LK +++QVT SG +AL L + H D
Sbjct: 719 FHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAALE-----------NNHNFD-- 765
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
LI+ D MP MTGY++ +I+E + +PV++++++N + + + GA+
Sbjct: 766 --------LILLDIMMPNMTGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGAN 817
Query: 604 EFFLKPVRLSD-MNKLKPHILKSR 672
++ KP + + +++ HI S+
Sbjct: 818 DYLTKPFAKDELLTRIQTHIKLSK 841
>ref|ZP_00814745.1| Response regulator receiver:CheW-like protein [Shewanella
putrefaciens CN-32]
gb|EAO93925.1| Response regulator receiver:CheW-like protein [Shewanella
putrefaciens CN-32]
Length = 326
Score = 62.4 bits (150), Expect = 4e-08
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDS RK+IE L+++ + + T G AL+ L + + A+
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEML--------------MEFETLAD 241
Query: 430 QDVA-----VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
QD A V+ IITD MP M G L+K+++ES + R +P+V+ SS + +
Sbjct: 242 QDNASISDFVSAIITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSSLMSEDNRIKAISL 301
Query: 595 GADEFFLKP 621
GA++ KP
Sbjct: 302 GANDTITKP 310
>ref|ZP_00903075.1| Response regulator receiver:CheW-like protein [Shewanella sp.
W3-18-1]
gb|EAP57058.1| Response regulator receiver:CheW-like protein [Shewanella sp.
W3-18-1]
Length = 326
Score = 62.4 bits (150), Expect = 4e-08
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDS RK+IE L+++ + + T G AL+ L + + A+
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEML--------------MEFETLAD 241
Query: 430 QDVA-----VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
QD A V+ IITD MP M G L+K+++ES + R +P+V+ SS + +
Sbjct: 242 QDNASISDFVSAIITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSSLMSEDNRIKAISL 301
Query: 595 GADEFFLKP 621
GA++ KP
Sbjct: 302 GANDTITKP 310
>dbj|BAD72541.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
Length = 696
Score = 62.4 bits (150), Expect = 4e-08
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL+ + VT+ + AL+ L N
Sbjct: 28 VLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLL-------------------REN 68
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+D+ +L+I+D MP M G+ LL+ + D+PV+++S + + + GA ++
Sbjct: 69 RDM-FDLVISDVHMPDMDGFKLLELVGLEM---DLPVIMLSVNGETKTVMKGITHGACDY 124
Query: 610 FLKPVRLSDMNKLKPHILKSR--------------CNQEQHQQSDSHSGERRNPTISSSD 747
LKPVR+ ++ + H+++ + CN+ Q +D + PT SSD
Sbjct: 125 LLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQ---PTCGSSD 181
Query: 748 SINNRKRK 771
RK
Sbjct: 182 QNGRSSRK 189
>dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 62.0 bits (149), Expect = 5e-08
Identities = 40/124 (32%), Positives = 60/124 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL DDS +R ++ R L QV V G A++ A
Sbjct: 161 VLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVE----------------------AV 198
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
A +L++ D MPGM G ++LK IK S LR +PV+++S+ + I RC+E GA+++
Sbjct: 199 FGQAFDLVLLDMIMPGMNGDEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDY 258
Query: 610 FLKP 621
KP
Sbjct: 259 LPKP 262
>emb|CAC45873.1| PUTATIVE TRANSCRIPTION REGULATOR (WITH TANDEM N-TERMINAL RESPONSE
REGULATOR DOMAINS) PROTEIN [Sinorhizobium meliloti]
ref|NP_385400.1| PUTATIVE TRANSCRIPTION REGULATOR (WITH TANDEM N-TERMINAL RESPONSE
REGULATOR DOMAINS) PROTEIN [Sinorhizobium meliloti 1021]
Length = 455
Score = 62.0 bits (149), Expect = 5e-08
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + KL+E L F V T G AL A
Sbjct: 5 ILVVDDVPANVKLLEARLVAEYFDVLTAGDGHAAL----------------------ATC 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ V+L++ D MPGM G+++ +++K +S IPVV++++ + PS R L+ GAD+F
Sbjct: 43 EKTPVDLVLLDIMMPGMDGFEVCERLKANSRTAHIPVVMITALDQPSDRVRGLKAGADDF 102
Query: 610 FLKPVR-LSDMNKLK 651
KPV L M+++K
Sbjct: 103 LTKPVNDLQLMSRVK 117
>ref|YP_436385.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gb|ABC31960.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 758
Score = 62.0 bits (149), Expect = 5e-08
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+D+ +R L ++L+ +V ++G A+Q +G TH
Sbjct: 635 VLLVEDNTVNRNLARKMLEKCGCRVDFAENGEIAIQQMG-----------STH------- 676
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESS-SLRDIPVVIMSSENIPSRINRCLEEGADE 606
+LI D MP M GY+ ++I+ES S IP+V +++ P +C++ G D+
Sbjct: 677 ----FDLIFMDCWMPVMDGYETTRRIRESGQSFSHIPIVALTANAFPGEKEKCMQCGMDD 732
Query: 607 FFLKPVRLSDMNKLKPH 657
F KP+R +++ + H
Sbjct: 733 FLTKPIRFEELSAIVRH 749
>ref|ZP_00106448.1| COG0642: Signal transduction histidine kinase [Nostoc punctiforme
PCC 73102]
Length = 374
Score = 62.0 bits (149), Expect = 5e-08
Identities = 39/160 (24%), Positives = 82/160 (51%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M+ V + +LAVDD+ + L++ +L++ +++ V G KAL+ Q PP
Sbjct: 1 MSVVENNKIYRILAVDDTRDNLILVQAILESEGYEIDLVSDGIKALR------QVEKSPP 54
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
+LI+ D MPGM GY++ ++I+ + ++ IP++++++ + S +
Sbjct: 55 ----------------DLILLDVMMPGMDGYEVTRRIRNNPAISYIPILLITAFH-ESSV 97
Query: 577 NRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
L+ GAD+F KP ++ +L+ + + ++ Q+
Sbjct: 98 VEGLDAGADDFIRKPFDTDELLARVRSLLRLKHSLDEQQK 137
>ref|ZP_00109922.1| COG0642: Signal transduction histidine kinase [Nostoc punctiforme
PCC 73102]
Length = 759
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/133 (25%), Positives = 66/133 (49%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P+ +L VDD +R +I LL+ F V +G + L+ + + P
Sbjct: 547 PYTILMVDDRWENRTVITNLLQPLGFNVVEASNGKEGLE------KAIALKP-------- 592
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
NLI+TD MP M G++L+K ++ + ++D+ +++ S+ + NR L+ G
Sbjct: 593 --------NLIVTDLLMPEMDGFELIKHLRHTPEIQDVLIIVSSASVFEADRNRSLQAGG 644
Query: 601 DEFFLKPVRLSDM 639
+ F KP+++ ++
Sbjct: 645 NAFLSKPIQVDEL 657
>gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 62.0 bits (149), Expect = 5e-08
Identities = 37/127 (29%), Positives = 65/127 (51%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
++L VDDS R L+ +LK ++VT ++G L+ L +Q
Sbjct: 5 NILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKLYSMEQ---------------- 48
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
V+LII+D MP M G+ ++ ++E RD+P+V++S+E I + L+ GA+
Sbjct: 49 -----VDLIISDINMPKMDGFTFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANL 103
Query: 607 FFLKPVR 627
+ +KP +
Sbjct: 104 YMVKPAQ 110
>emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
ref|YP_363650.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 726
Score = 62.0 bits (149), Expect = 5e-08
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Frame = +1
Query: 178 LPCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQ 357
L S+ A + A +L DD +R +++RLL+ + +V V+ + L
Sbjct: 440 LEASNVIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLD 499
Query: 358 FLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRD 531
+ D D+ + +H MPGM+G D+LK+++ ++S +R
Sbjct: 500 AMAEEDFDAVIVDLH----------------------MPGMSGLDMLKQLRVMQASGMRY 537
Query: 532 IPVVIMSSENIPSRINRCLEEGADEFFLKPV 624
PVV++S++ P I C + GA F KPV
Sbjct: 538 TPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>ref|ZP_00692360.1| Response regulator receiver [Rhodoferax ferrireducens DSM 15236]
gb|EAO41532.1| Response regulator receiver [Rhodoferax ferrireducens DSM 15236]
Length = 143
Score = 61.6 bits (148), Expect = 7e-08
Identities = 37/124 (29%), Positives = 61/124 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDDS+ R++ +RLLK F+V G +AL+ L
Sbjct: 22 VLVVDDSITVRRVTQRLLKREGFRVALAIDGLQALERL---------------------- 59
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
Q+ ++++D MP M G+DL++ I+ + LRD+P+++++S R E G D +
Sbjct: 60 QEEKPAVVLSDIEMPRMDGFDLVRNIRGDAKLRDLPIIMITSRIAEKHRERARELGVDHY 119
Query: 610 FLKP 621
KP
Sbjct: 120 LGKP 123
>gb|AAR34661.1| sensory box sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
ref|NP_952338.1| sensory box sensor histidine kinase/response regulator [Geobacter
sulfurreducens PCA]
Length = 772
Score = 61.6 bits (148), Expect = 7e-08
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P VL VDDS RK++ LL++ +VT G +AL +G
Sbjct: 545 PLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGRE---------------- 588
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEE 594
A +L++ D MP M G++ ++ I+ E++ +P++ +++ + CLE
Sbjct: 589 ------AFDLVLMDVQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEA 642
Query: 595 GADEFFLKPVRLSDMNKL 648
GAD++ KPV S++ ++
Sbjct: 643 GADDYLAKPVNFSELRRV 660
>gb|AAM36740.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
ref|NP_642204.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 725
Score = 61.6 bits (148), Expect = 7e-08
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD L +R +++RLL+ + +VT VD G L L D D+ + +H
Sbjct: 462 ILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALADTDYDAAIVDLH--------- 512
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPG++G D+LK+++ ++ VV++S++ P I C + GA
Sbjct: 513 -------------MPGVSGLDMLKQLRVMQAGGASVTQVVVLSADVTPESIRSCEQAGAY 559
Query: 604 EFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGER 720
F KPV KL + + NQ+ +Q+D+ G+R
Sbjct: 560 AFLAKPVAAV---KLLDTLAEIALNQKV-RQTDAAIGKR 594
>ref|YP_460259.1| signal transduction histidine kinase [Syntrophus aciditrophicus SB]
gb|ABC76091.1| signal transduction histidine kinase [Syntrophus aciditrophicus SB]
Length = 725
Score = 61.6 bits (148), Expect = 7e-08
Identities = 39/126 (30%), Positives = 63/126 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+DS + ++ +L+ + +Q V +G +A++FL L D
Sbjct: 14 ILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPD---------------- 57
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
LII+D MP M GY L + +K LR IPV++++ + P + R LE GAD+F
Sbjct: 58 ------LIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDF 111
Query: 610 FLKPVR 627
KP +
Sbjct: 112 ITKPCK 117
Score = 38.5 bits (88), Expect = 0.65
Identities = 35/141 (24%), Positives = 62/141 (43%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDD ++ + L+T ++VT + + +AL+ T L
Sbjct: 603 HILFVDDETALVEMGQETLRTLGYRVTGICNSLEALETFR-----------RTPSL---- 647
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+LIITD MP MTG L + + + DIP+++ + + E G E
Sbjct: 648 -----FDLIITDMTMPQMTGTVLSRHLLQIRG--DIPIILCTGYSEFITEKEAKELGIRE 700
Query: 607 FFLKPVRLSDMNKLKPHILKS 669
F +KP+ + ++ + +L S
Sbjct: 701 FIMKPLFMKELATVIRRVLDS 721
>ref|ZP_00846142.1| GGDEF [Rhodopseudomonas palustris BisB18]
gb|EAP11914.1| GGDEF [Rhodopseudomonas palustris BisB18]
Length = 457
Score = 61.6 bits (148), Expect = 7e-08
Identities = 37/125 (29%), Positives = 62/125 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + KL+E L F V T +G++AL+
Sbjct: 5 ILVVDDIPANAKLLEARLSAEYFDVLTASNGAQALEICSR-------------------- 44
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
A ++++ D MP M G+++ +++K + + IPVV++++ + PS R LE GAD+F
Sbjct: 45 --AACDIVLLDVMMPDMDGFEVCRRLKSNPATHFIPVVMVTALDSPSDRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>ref|XP_507543.1| PREDICTED OJ1695_H09.29 gene product [Oryza sativa (japonica
cultivar-group)]
ref|XP_507028.1| PREDICTED OJ1695_H09.29 gene product [Oryza sativa (japonica
cultivar-group)]
ref|XP_468266.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD19284.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD19083.1| putative response regulator 9 [Oryza sativa (japonica
cultivar-group)]
Length = 688
Score = 61.6 bits (148), Expect = 7e-08
Identities = 45/176 (25%), Positives = 82/176 (46%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD K++E LL + VTT + + AL+ L N
Sbjct: 26 VLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKML-------------------REN 66
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+D+ +L+I+D MP M G+ LL+ + D+PV+++S + + + GA ++
Sbjct: 67 RDM-FDLVISDVHMPDMDGFKLLELVGLEM---DLPVIMLSVNGETKTVLKGITHGACDY 122
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGA 777
LKPVR+ ++ + H+++ + + D + E P + SD ++ G+
Sbjct: 123 LLKPVRIEELRNIWQHVIRRKFSTRDRANLDFYE-ECNKPPNADSDHVHGHVTCGS 177
>dbj|BAA17201.1| CheY subfamily [Synechocystis sp. PCC 6803]
ref|NP_440521.1| CheY subfamily [Synechocystis sp. PCC 6803]
Length = 121
Score = 61.6 bits (148), Expect = 7e-08
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+D+ D+ L++ LLK+ + ++ +AL++L N
Sbjct: 4 VLVVEDTKSDQLLVQGLLKSMGTEAVICNNADEALEWL---------------------N 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ +LI+ D MP ++GYDL +KI+ +L D+P+V S++N L +G + +
Sbjct: 43 KNTVPDLIMLDIVMPDISGYDLCRKIRGELALEDVPIVFCSTKNEDYDRFWALRQGGNAY 102
Query: 610 FLKPVR-LSDMNKLKPHI 660
+KP + M +KP+I
Sbjct: 103 LIKPYSPIELMKTVKPYI 120
>ref|ZP_01170785.1| sensor histidine kinase [Bacillus sp. NRRL B-14911]
gb|EAR66514.1| sensor histidine kinase [Bacillus sp. NRRL B-14911]
Length = 933
Score = 61.6 bits (148), Expect = 7e-08
Identities = 31/130 (23%), Positives = 64/130 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL DD + +E+ LK +VTTV +G + L+ +G
Sbjct: 812 VLICDDDNRNIYALEKALKAEGMEVTTVQNGQECLEMVG--------------------- 850
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
Q +++I+ D MP M GY+ +++++ L +P++ ++++ + +CL+ GA ++
Sbjct: 851 QKRDIDIILMDIMMPVMDGYETMQRLRSMDGLEQMPIIALTAKAMKGDKQKCLDAGASDY 910
Query: 610 FLKPVRLSDM 639
KP++L +
Sbjct: 911 ISKPLKLDQL 920
>ref|ZP_00673284.1| Guanylate cyclase:Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Trichodesmium
erythraeum IMS101]
gb|EAO27674.1| Guanylate cyclase:Response regulator receiver:GAF:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Trichodesmium
erythraeum IMS101]
Length = 1172
Score = 61.6 bits (148), Expect = 7e-08
Identities = 41/149 (27%), Positives = 71/149 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD+ R + R+L+ S+F V G++ +F +H H H
Sbjct: 816 ILVVDDNPDLRNYVSRILRKSNFNVVLARDGAEGFEFAEIH---------HPH------- 859
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+IITD MP ++G DL+K I+E LR P+++++++ +E GAD +
Sbjct: 860 ------VIITDLMMPVVSGLDLIKMIREEKQLRGTPIILLTAKADEDTRIEGVERGADAY 913
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
KP ++ ++L + N E+H Q
Sbjct: 914 LSKPFNDRELLAEVRNLLVLKEN-ERHMQ 941
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC
Length = 677
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 415 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--------- 465
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 466 -------------MPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 512
Query: 604 EFFLKPV 624
F KPV
Sbjct: 513 AFLAKPV 519
>ref|YP_234190.1| PAS:GGDEF [Pseudomonas syringae pv. syringae B728a]
gb|AAY36152.1| PAS:GGDEF [Pseudomonas syringae pv. syringae B728a]
Length = 705
Score = 61.2 bits (147), Expect = 9e-08
Identities = 38/136 (27%), Positives = 67/136 (49%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
TE+ +L +DD + R L+E LL+ ++ T +SG AL +
Sbjct: 2 TESAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMV---------------- 45
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
+ A +LI+ D MPGM GY++ ++K +IP++++S+ + S LE
Sbjct: 46 ------KRQAPDLILLDIMMPGMDGYEVASQLKAEKGTANIPIIMLSALDDQSSRLSGLE 99
Query: 592 EGADEFFLKPVRLSDM 639
GA+E+ KPV +++
Sbjct: 100 AGAEEYLNKPVDSAEL 115
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC
Length = 677
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 415 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--------- 465
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 466 -------------MPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 512
Query: 604 EFFLKPV 624
F KPV
Sbjct: 513 AFLAKPV 519
>ref|ZP_00809953.1| GGDEF [Rhodopseudomonas palustris BisA53]
gb|EAO89838.1| GGDEF [Rhodopseudomonas palustris BisA53]
Length = 457
Score = 61.2 bits (147), Expect = 9e-08
Identities = 38/125 (30%), Positives = 61/125 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + KL+E L F V T SG++AL+ + D
Sbjct: 5 ILVVDDIPANAKLLEARLSAEYFDVLTASSGAQALEICARSECD---------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+ D MP M G+++ +++K + IPVV++++ + P+ R LE GAD+F
Sbjct: 49 ------IILLDVMMPDMDGFEVCRRLKANPKTHFIPVVMVTALDSPADRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>ref|ZP_00520395.1| Response regulator receiver [Solibacter usitatus Ellin6076]
gb|EAM60745.1| Response regulator receiver [Solibacter usitatus Ellin6076]
Length = 497
Score = 61.2 bits (147), Expect = 9e-08
Identities = 40/137 (29%), Positives = 65/137 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDS + KL +L++ ++VT S +A+ L +TVP
Sbjct: 6 ILVVDDSAVNLKLAAAVLRSDGYRVTVASSAEQAIMTLR-----TTVP------------ 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L++ D +PGM+G L + I+E S LR + VV++++ P + E G D F
Sbjct: 49 -----DLVLVDIQLPGMSGLALTRHIREDSRLRKVMVVVLTASTAPECEQQAYEAGCDGF 103
Query: 610 FLKPVRLSDMNKLKPHI 660
KP+ D L P +
Sbjct: 104 ICKPI---DTRTLGPRL 117
>dbj|BAB41137.1| response regulator 8 [Zea mays]
Length = 684
Score = 61.2 bits (147), Expect = 9e-08
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +++R+L + VTT ++AL L + +
Sbjct: 17 VLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR----------------- 59
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++II+D MP M G+ LL+ + D+PV++MS+++ + + ++ GA ++
Sbjct: 60 ---GFDVIISDVHMPDMDGFRLLELVGLEM---DLPVIMMSADSRTDIVMKGIKHGACDY 113
Query: 610 FLKPVRLSDMNKLKPHILKSRCN-QEQHQQSDS-HSGERRNPTISSSDSINNRKRKGAGT 783
+KPVR+ ++ + H+++ + N + H+ S S +R PT + ++ ++ G G+
Sbjct: 114 LIKPVRMEELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGS 173
>ref|ZP_00671342.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Trichodesmium erythraeum IMS101]
gb|EAO29504.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Trichodesmium erythraeum IMS101]
Length = 750
Score = 61.2 bits (147), Expect = 9e-08
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VD+ +R +I LL+ F V ++G GL+ + P
Sbjct: 534 LLVVDNKWENRSVIVNLLEPLKFNVIEAENGED-----GLNKANKFRP------------ 576
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
NLIITD MP M GY+ +K I+ S L+ IPV++ S+ I + + L+ G D F
Sbjct: 577 -----NLIITDLMMPVMDGYEFMKHIRTSEILKPIPVIVSSASVISTVRQKSLDAGGDGF 631
Query: 610 FLKPVRLSDMNKLKPH----------ILKSRCNQEQHQQS 699
KPV ++ KL IL + QHQQ+
Sbjct: 632 LEKPVGSDELFKLLQEHLQITWKYESILTPGSSDLQHQQN 671
>ref|ZP_01016345.1| putative diguanylate cyclase (GGDEF) [Parvularcula bermudensis
HTCC2503]
gb|EAQ16856.1| putative diguanylate cyclase (GGDEF) [Parvularcula bermudensis
HTCC2503]
Length = 459
Score = 61.2 bits (147), Expect = 9e-08
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD P+ KL+E L+ F+V T G +A++ D
Sbjct: 5 VLVVDDLAPNVKLLEAKLRAEYFEVITALGGREAIELARTQSPD---------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+ D MPG+ G++ K +KE R IPVV++++ + S LE GAD+F
Sbjct: 49 ------IILLDVMMPGIDGFETCKLLKEDPLTRHIPVVMVTALDQRSDRIAGLEAGADDF 102
Query: 610 FLKPV-------RLSDMNKLK 651
KPV R+ ++++LK
Sbjct: 103 LTKPVQDLALFARVRNLSRLK 123
>dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 61.2 bits (147), Expect = 9e-08
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +++R+L + VTT ++AL L + +
Sbjct: 17 VLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR----------------- 59
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++II+D MP M G+ LL+ + D+PV++MS+++ + ++ GA ++
Sbjct: 60 ---GFDVIISDVHMPDMDGFRLLELVGLEM---DLPVIMMSADSRTDIVMNGVKHGACDY 113
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ-EQHQQSDS-HSGERRNPTISSSDSINNRKRKGAGT 783
+KPVR+ ++ + H+++ + N+ + H+ S S +R PT + ++ ++ G G+
Sbjct: 114 LIKPVRMEELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGS 173
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21
Length = 592
Score = 61.2 bits (147), Expect = 9e-08
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
+V+ VDD ++ R+L+ S ++V VD KAL L + +
Sbjct: 17 NVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDN--------------- 61
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
++LIITDY MPGM G L K+I + ++PV++MSS+ ++ L GA
Sbjct: 62 -----IDLIITDYYMPGMNGLQLKKQI--TQEFGNLPVLVMSSDT--NKEEESLSCGAMG 112
Query: 607 FFLKPVRLSDMNKLKPHILKSRCN-------QEQHQQSD 702
F KP+ +D+ K+ L ++ N ++ H+ +D
Sbjct: 113 FIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDAD 151
>ref|ZP_00518336.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
gb|EAM48578.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
Length = 122
Score = 61.2 bits (147), Expect = 9e-08
Identities = 39/124 (31%), Positives = 58/124 (46%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DDS R+LI LLK + F V T G++AL+ L
Sbjct: 4 ILVADDSPAQRELIAGLLKENGFSVATAIDGAEALEKL---------------------- 41
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +A +LII D MP + GY + IK IPV++ S++N L++GAD +
Sbjct: 42 KSLAPDLIILDVVMPNLNGYQTCRSIKSDPKTEHIPVILCSTKNTQVDSYWGLKQGADAY 101
Query: 610 FLKP 621
+KP
Sbjct: 102 IVKP 105
>ref|ZP_00674272.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Trichodesmium erythraeum IMS101]
gb|EAO26880.1| Guanylate cyclase:Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Trichodesmium erythraeum IMS101]
Length = 1133
Score = 61.2 bits (147), Expect = 9e-08
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
FHVL VDD + +++ LK +++QVT SG +AL L + H D
Sbjct: 722 FHVLVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAALE-----------NNHNFD-- 768
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
LI+ D MP M+GY++ +I+E + +PV++++++N + + + GA+
Sbjct: 769 --------LILLDVMMPNMSGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGAN 820
Query: 604 EFFLKPVRLSD-MNKLKPHILKSR 672
++ KP + + +++ HI S+
Sbjct: 821 DYLTKPFAKDELLTRIQTHIKLSK 844
>ref|ZP_01113979.1| putative two-component system sensory histidine kinase. [Reinekea sp.
MED297]
gb|EAR10024.1| putative two-component system sensory histidine kinase. [Reinekea sp.
MED297]
Length = 1090
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/130 (27%), Positives = 63/130 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD L + + ++L F+V+ D+G AL L +
Sbjct: 966 VLVVDDDLRNTYTLSKILSNEGFRVSIADNGQLALDKL---------------------S 1004
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+D + LI+ D MP M GY+ + +I+ S +P++ ++++ +P +CL GAD++
Sbjct: 1005 KDSNIALILMDIMMPVMDGYETIARIRAQHS-ETLPIIALTAKAMPEDRQKCLSAGADDY 1063
Query: 610 FLKPVRLSDM 639
KPV L +
Sbjct: 1064 LPKPVDLEQL 1073
Score = 40.8 bits (94), Expect = 0.13
Identities = 19/66 (28%), Positives = 41/66 (62%)
Frame = +1
Query: 451 IITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRL 630
+I D +P + G ++L+ ++ R+IPV ++S+ + P+ R ++ GA+E+ KP+ L
Sbjct: 850 VILDLGLPDIDGCEILQVLQNLQHHRNIPVHVISALDDPA---RAMQLGAEEYLAKPINL 906
Query: 631 SDMNKL 648
+N++
Sbjct: 907 EQLNQV 912
>emb|CAB89845.1| fused two-component sensor-regulator protein [Xanthomonas
campestris]
gb|AAY49386.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
ref|YP_243406.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 726
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--------- 514
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 515 -------------MPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 561
Query: 604 EFFLKPV 624
F KPV
Sbjct: 562 AFLAKPV 568
>gb|AAM41145.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
ref|NP_637221.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 726
Score = 61.2 bits (147), Expect = 9e-08
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--------- 514
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 515 -------------MPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 561
Query: 604 EFFLKPV 624
F KPV
Sbjct: 562 AFLAKPV 568
>ref|ZP_01126435.1| phosphate regulon response regulator PhoB [Nitrococcus mobilis
Nb-231]
gb|EAR22829.1| phosphate regulon response regulator PhoB [Nitrococcus mobilis
Nb-231]
Length = 228
Score = 60.8 bits (146), Expect = 1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+D R++I L S + V DSG L L D VP
Sbjct: 4 ILIVEDEAAIREMIAMALIRSDYSVHQADSGEAGLTLL-----DEIVP------------ 46
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L++ D+ +PGM+G D +++K + RD+P++++++ R LE GAD+F
Sbjct: 47 -----DLVLLDWMLPGMSGIDFARRVKRHPTYRDVPIIMLTARGEEEDKIRGLEVGADDF 101
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEE 789
KP P L +R + + ER + D + +R G T E
Sbjct: 102 VTKP--------FSPRELLARIKAVLRRAAPLSGDERIEVKGLTLDPVAHRVWIGEDTLE 153
Query: 790 ILP 798
I P
Sbjct: 154 IGP 156
>ref|ZP_00054733.1| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 1179
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/132 (26%), Positives = 62/132 (46%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD + + + ++L+T +V G+KAL L
Sbjct: 1054 VLLVDDDMRNAFALSKVLRTKGLKVLIAQDGTKALSQLRSRSD----------------- 1096
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V+LI+ D MPGM GY + +I++ +P++ ++++ + +RCL GAD++
Sbjct: 1097 ----VDLILLDIMMPGMDGYQTMGEIRKDPRYAHLPIIALTAKAMAGDRDRCLASGADDY 1152
Query: 610 FLKPVRLSDMNK 645
KPV + + K
Sbjct: 1153 LTKPVDVELLRK 1164
>ref|NP_791108.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato str. DC3000]
gb|AAO54803.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 705
Score = 60.8 bits (146), Expect = 1e-07
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
T+ +L VDD + R L+E LL+ ++ T +SG +AL + D+ P
Sbjct: 2 TQPAATILIVDDDVHVRDLLEVLLQNQGYETLTAESGEQALAMV-----DARAP------ 50
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
+LI+ D MPGM GY++ +K +IP++++S+ + LE
Sbjct: 51 -----------DLILLDIMMPGMDGYEVASVLKAGKGTANIPIIMLSALDEQGARLSGLE 99
Query: 592 EGADEFFLKPVRLSDM 639
GA+E+ KPV +++
Sbjct: 100 AGAEEYLSKPVESAEL 115
>ref|ZP_00506684.1| PAS domain [Polaromonas sp. JS666]
gb|EAM39302.1| PAS domain [Polaromonas sp. JS666]
Length = 566
Score = 60.8 bits (146), Expect = 1e-07
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P H+L +DS ++ RLL+ + + +G AL+ +
Sbjct: 15 PAHILIAEDSGVQAYMLRRLLEEEGYATSVAKNGRLALE--------------------L 54
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
AA + +L+++D MP M+GY+L ++IK + L IPV+++++ + P + L+ GA
Sbjct: 55 AAR--IRPSLLVSDVNMPEMSGYELCRQIKANPDLCHIPVILVTNLSDPDDVLLGLKSGA 112
Query: 601 DEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSD----SHSGERRNPTISSSDSIN 756
D F +KP + M H L ++ + ++ S GE+ T S + +N
Sbjct: 113 DSFVIKPYDRTHMLARVQHALSNQHLRSTAEEGPGVEISFHGEKHQITASRAQILN 168
>ref|ZP_00552815.1| IMP dehydrogenase/GMP reductase:Response regulator
receiver:CheW-like protein:ATP-binding region,
ATPase-like:Signal transducing histidine kinase,
homodimeric [Desulfuromonas acetoxidans DSM 684]
gb|EAM69676.1| IMP dehydrogenase/GMP reductase:Response regulator
receiver:CheW-like protein:ATP-binding region,
ATPase-like:Signal transducing histidine kinase,
homodimeric [Desulfuromonas acetoxidans DSM 684]
Length = 664
Score = 60.8 bits (146), Expect = 1e-07
Identities = 40/136 (29%), Positives = 64/136 (47%)
Frame = +1
Query: 214 VMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 393
V A A VL VDDSL RK +L+ + +V +G +AL+ L
Sbjct: 533 VEGAGAKSASARVLVVDDSLSIRKYASMILEANGVEVLLATNGHEALEVL---------- 582
Query: 394 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 573
+D V++I+TD MP M GY+LL ++ +LR IP V+++S +
Sbjct: 583 ------------EDEKVDMILTDLEMPVMHGYELLSELNRRENLRMIPTVVITSRSGGHH 630
Query: 574 INRCLEEGADEFFLKP 621
+ + GA ++ +KP
Sbjct: 631 QEKAFKLGASDYLVKP 646
>ref|ZP_00587386.1| GGDEF [Shewanella amazonensis SB2B]
gb|EAN38160.1| GGDEF [Shewanella amazonensis SB2B]
Length = 438
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/136 (26%), Positives = 68/136 (50%)
Frame = +1
Query: 214 VMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 393
++A +A VL DDS RK + LL+ F+V ++G++AL+ L
Sbjct: 134 LIATLARNRHTKVLVADDSALSRKFVRNLLELHLFEVIEAENGARALELL---------- 183
Query: 394 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 573
D + + L+I DY MPG+ G++L+ + +E S ++ ++ +S++ +
Sbjct: 184 -------DAVSG----IRLLIADYNMPGIDGFELILRAREKFSREEMAIIGLSNDTDETL 232
Query: 574 INRCLEEGADEFFLKP 621
R ++ GA++F KP
Sbjct: 233 TARFIKNGANDFLQKP 248
>ref|ZP_01093313.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
gb|EAQ78009.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
Length = 543
Score = 60.8 bits (146), Expect = 1e-07
Identities = 41/164 (25%), Positives = 77/164 (46%)
Frame = +1
Query: 175 ILPCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKAL 354
I+ A AA+ T P HVL V+D+ + L+ R+L+ + VT+ G++A+
Sbjct: 395 IMAAEEPTAPGNEAAAALPTTIPGHVLIVEDAPSIQFLVRRILEGAGATVTSAGDGAEAI 454
Query: 355 QFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDI 534
+ L A+Q+ +L++ D MP M+GYD + +++ +I
Sbjct: 455 EML-------------------LADQERPFDLVLMDMHMPIMSGYDAAQALRQKGC--EI 493
Query: 535 PVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILK 666
P++ +++ + +CL G D++ KP+ D KL + K
Sbjct: 494 PIIALTASAMTGDRIKCLAAGCDDYLPKPI---DQRKLLQMVAK 534
>emb|CAI87668.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis TAC125]
ref|YP_341110.1| two-component response regulator [Pseudoalteromonas haloplanktis
TAC125]
Length = 299
Score = 60.8 bits (146), Expect = 1e-07
Identities = 41/124 (33%), Positives = 64/124 (51%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +R ++E+ L + +V V SG +AL F+
Sbjct: 7 VLIVDDDALNRIVLEKTL-SDEHEVFLVKSGDEALTFI---------------------- 43
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ V+LII D MPGM GY++L K+KE S+ + IPV+ +S+ + ++ LE GA ++
Sbjct: 44 KTTQVDLIILDIVMPGMNGYEVLVKLKEDSATQMIPVIFISANSSHDDESKGLELGAMDY 103
Query: 610 FLKP 621
KP
Sbjct: 104 ITKP 107
>dbj|BAC47553.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
ref|NP_768928.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
Length = 527
Score = 60.8 bits (146), Expect = 1e-07
Identities = 45/156 (28%), Positives = 73/156 (46%)
Frame = +1
Query: 229 ATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTH 408
ATET +L VDD +R L+ R L +V++V G +ALQ L + D
Sbjct: 179 ATETG-SILVVDDIEANRDLLSRRLTRDGHRVSSVAGGQQALQALANDEFD--------- 228
Query: 409 QLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCL 588
L++ D MP + G D+L ++K LR IPV+++++ RC+
Sbjct: 229 -------------LVLLDLMMPDINGLDVLVRMKADERLRRIPVIMITALAETESAVRCI 275
Query: 589 EEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
E GA+++ KP P +L++R N H++
Sbjct: 276 EAGAEDYLPKP--------FDPILLRARINACLHKK 303
>ref|YP_478157.1| response regulator [Cyanobacteria bacterium Yellowstone B-Prime]
gb|ABD02894.1| response regulator [Cyanobacteria bacterium Yellowstone B-Prime]
Length = 380
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/130 (26%), Positives = 67/130 (51%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
++ P H+L +DDS+ +K +E +L+ +QVTT+ + KAL + L + D
Sbjct: 249 SDKPSHILCIDDSMAIQKTVEFILQNEGYQVTTIGNPLKALGQVFLLNPD---------- 298
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
+I+ D MP + GY+L +++SS R+ P+++++ ++ + +
Sbjct: 299 ------------MILCDVAMPKLDGYELCAMLRKSSQFRETPMIMLTGKDGFTDRIKARM 346
Query: 592 EGADEFFLKP 621
GA+EF KP
Sbjct: 347 AGANEFLSKP 356
>ref|YP_476104.1| response regulator [Cyanobacteria bacterium Yellowstone A-Prime]
gb|ABD00841.1| response regulator [Cyanobacteria bacterium Yellowstone A-Prime]
Length = 380
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/130 (26%), Positives = 67/130 (51%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
++ P H+L +DDS+ +K +E +L+ +QVTT+ + KAL + L + D
Sbjct: 249 SDKPAHILCIDDSMAIQKTVEFILQNEGYQVTTIGNPLKALGQVFLLNPD---------- 298
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
+I+ D MP + GY+L +++SS R+ P+++++ ++ + +
Sbjct: 299 ------------MILCDVAMPKLDGYELCAMLRKSSQFRETPMIMLTGKDGFTDRLKARM 346
Query: 592 EGADEFFLKP 621
GA+EF KP
Sbjct: 347 AGANEFLSKP 356
>ref|NP_178285.1| ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/
two-component response regulator [Arabidopsis thaliana]
gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14
Length = 382
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/159 (22%), Positives = 75/159 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD ++E++L +QVT AL L
Sbjct: 13 ILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL--------------------RE 52
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ + +L+++D MPGM GY+LL+++ D+PV++MS + + + + GA ++
Sbjct: 53 RKDSFDLVLSDVHMPGMNGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDY 110
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRN 726
+KP+R ++ + H+++ +C ++ +S + +N
Sbjct: 111 LIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKN 149
>gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/159 (22%), Positives = 75/159 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD ++E++L +QVT AL L
Sbjct: 13 ILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL--------------------RE 52
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ + +L+++D MPGM GY+LL+++ D+PV++MS + + + + GA ++
Sbjct: 53 RKDSFDLVLSDVHMPGMNGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDY 110
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRN 726
+KP+R ++ + H+++ +C ++ +S + +N
Sbjct: 111 LIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKN 149
>dbj|BAB75796.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_488137.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 965
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/147 (24%), Positives = 70/147 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L +D+ + I L++ +++ ++G +AL F
Sbjct: 835 ILLAEDNQANIDTISSYLESRGYEMVLAENGQQALDFA---------------------- 872
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ +LII D MPGM G + +++I+ DIP++ +++ +PS CL GA+E+
Sbjct: 873 REKCPDLIIMDIQMPGMNGLEAIRQIRNEQKFIDIPIIALTALAMPSDRTTCLAAGANEY 932
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQH 690
KP++L + +LK+ +QE H
Sbjct: 933 LTKPIKLKQLVLTIQQLLKN--HQELH 957
>gb|AAQ83694.1| pseudo-response regulator protein [Oryza sativa (indica
cultivar-group)]
Length = 640
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +1
Query: 439 AVNLIITDYCMPGMTGYDLLKKIKESSSL-RDIPVVIMSSENIPSRINRCLEEGADEFFL 615
++ ++T+ MPG++G LL +I R PV++MSS + + +CL +GA +F +
Sbjct: 4 SIVFVLTEVVMPGVSGISLLSRIMNPQYFARIFPVIMMSSNDAMGTVFKCLSKGAVDFLV 63
Query: 616 KPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINN 759
KP+R +++ L H+ + RC+ S+S ++ S D NN
Sbjct: 64 KPIRKNELKNLWQHVWR-RCHSSSGSGSESGIQTQKCAKSKSGDESNN 110
>dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
ref|YP_451753.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
ref|YP_201509.1| RpfC [Xanthomonas oryzae pv. oryzae KACC10331]
gb|AAW76124.1| RpfC [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 725
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 463 MLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMADEDFDAVIVDLH--------- 513
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM+G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 514 -------------MPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 560
Query: 604 EFFLKPV 624
F KPV
Sbjct: 561 AFLAKPV 567
>dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 (Receiver-like protein 5)
Length = 664
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD ++ER+L T ++VT + AL L +
Sbjct: 30 VLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKN----------------- 72
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++I+D MP M G+ LL+ + D+PV++MS+++ S + + + GA ++
Sbjct: 73 ---GFDIVISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDY 126
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ-----------------EQHQQSDSHSGERRNPTIS 738
+KPVR+ + + H+++ + N+ QQ + + +++
Sbjct: 127 LIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVN 186
Query: 739 SSDSINNRKRK 771
+ ++RKRK
Sbjct: 187 EGNGRSSRKRK 197
>ref|ZP_01160189.1| hypothetical putative regulatory component of sensory transduction
system [Photobacterium sp. SKA34]
gb|EAR55942.1| hypothetical putative regulatory component of sensory transduction
system [Photobacterium sp. SKA34]
Length = 324
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/128 (28%), Positives = 58/128 (45%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P H+L VDD L +R +E LK V + SG AL D D
Sbjct: 3 PMHILLVDDVLSERMYLELRLKNLGHVVKSFSSGQDALNSYASFDPD------------- 49
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
L++ D CMP M G +L +KI+ + +P++ +S+ + P I +++G
Sbjct: 50 ---------LVVLDICMPDMKGTELAQKIR-TCFPEWVPIIFLSAHSEPELIAEAIDKGG 99
Query: 601 DEFFLKPV 624
D++ KPV
Sbjct: 100 DDYLTKPV 107
>emb|CAA66459.1| rpfC [Xanthomonas oryzae]
Length = 676
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L DD +R +++RLL+ + +V V+ + L + D D+ + +H
Sbjct: 414 MLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMADEDFDAVIVDLH--------- 464
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK--ESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
MPGM+G D+LK+++ ++S +R PVV++S++ P I C + GA
Sbjct: 465 -------------MPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGAR 511
Query: 604 EFFLKPV 624
F KPV
Sbjct: 512 AFLAKPV 518
>dbj|BAE52436.1| Chemotaxis response regulator protein-glutamate methylesterase
[Magnetospirillum magneticum AMB-1]
ref|YP_422995.1| Chemotaxis response regulator protein-glutamate methylesterase
[Magnetospirillum magneticum AMB-1]
Length = 625
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSF-QVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
VL VDD+L +R L+E LL+ QV TV+SG K L AA
Sbjct: 252 VLVVDDNLMNRVLMETLLRRMGVGQVETVESGEKGL----------------------AA 289
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+ +L++ D MPGM G+++ ++++ L ++PV+ +++ + P+ N C G +
Sbjct: 290 IEREKPDLVLLDVMMPGMDGFEMCRRLRRLHPLTELPVIFVTALDGPADRNACFAVGGSD 349
Query: 607 FFLKPVRLSDM 639
KP+ +++
Sbjct: 350 MVAKPIDANEV 360
>ref|ZP_01139684.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Geobacter uraniumreducens Rf4]
gb|EAR38180.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Geobacter uraniumreducens Rf4]
Length = 686
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/130 (28%), Positives = 63/130 (48%)
Frame = +1
Query: 229 ATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTH 408
AT H+L VDDS+ R + +L T ++V SG AL+
Sbjct: 562 ATRAKGHILVVDDSITTRTMERSILVTHGYEVEIAISGEDALE----------------- 604
Query: 409 QLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCL 588
VA + +L+I+D MPG++G++L ++++ RD+PV+I+SS + +
Sbjct: 605 --KVAGTR---FDLVISDVMMPGISGFELTRRLRTMEDYRDVPVIIVSSLARDEDKRQAM 659
Query: 589 EEGADEFFLK 618
E GA + +K
Sbjct: 660 ESGAQAYIVK 669
>gb|AAZ63425.1| PAS [Ralstonia eutropha JMP134]
ref|YP_298269.1| PAS [Ralstonia eutropha JMP134]
Length = 1284
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/139 (28%), Positives = 64/139 (46%)
Frame = +1
Query: 208 RSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDST 387
RSV T VL V+D+ +R++ LL+ + T ++G+ AL+ L + D D
Sbjct: 915 RSVTGPSWTLPHARVLLVEDNEINREVATHLLQQAGITPDTAENGAIALELLAVQDYD-- 972
Query: 388 VPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIP 567
L++ D MP M G++ + I+ + L +PVV M++ +P
Sbjct: 973 --------------------LVLMDMQMPVMDGFEATRHIRANPRLASMPVVAMTANALP 1012
Query: 568 SRINRCLEEGADEFFLKPV 624
NRCL G D+ KP+
Sbjct: 1013 EDRNRCLAAGMDDHIAKPI 1031
Score = 37.7 bits (86), Expect = 1.1
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD R++I +L+ F+ V+SG KAL + D+ P H
Sbjct: 780 LLVVDDHGYARQVIGSMLRGFGFRADEVESGEKALS--AIQHADAIADPYHA-------- 829
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ D+ MPG+ G ++K+ S P +M + N + R E E
Sbjct: 830 -------VFIDWRMPGLDGIQTVRKLAAMSLQSQRPRPLMITANGREEVVREGERNGFET 882
Query: 610 FL-KPVRLSDMNKLKPHILKS 669
L KPV S + +L S
Sbjct: 883 TLHKPVSPSVLFDATMRVLAS 903
>dbj|BAD51119.1| two-component system sensor histidine kinase/response regulator
hybrid [Bacteroides fragilis YCH46]
ref|YP_101653.1| two-component system sensor histidine kinase/response regulator
hybrid [Bacteroides fragilis YCH46]
Length = 1342
Score = 60.5 bits (145), Expect = 2e-07
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M A E VL V+D+ PD I + ++V T +G +A++ L H
Sbjct: 1084 MNAANAEKKMTVLLVEDN-PDINNILKSKLLRLYKVKTAYNGQEAVELLKTH-------- 1134
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
+++II+D MP M GY+L K IK S IPV++++S+ PS+
Sbjct: 1135 --------------IIDIIISDIMMPYMDGYELSKYIKTSREYSHIPVILITSQ--PSKE 1178
Query: 577 NRC--LEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQH 690
N L GAD + KP ++N ++LK++ N +H
Sbjct: 1179 NELQGLSAGADAYIEKPFTFDELNLRITNLLKAKNNIREH 1218
>emb|CAH09852.1| putative two-component system sensor kinase/response regulator fusion
protein [Bacteroides fragilis NCTC 9343]
ref|YP_213744.1| putative two-component system sensor kinase/response regulator fusion
protein [Bacteroides fragilis NCTC 9343]
Length = 1342
Score = 60.5 bits (145), Expect = 2e-07
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Frame = +1
Query: 217 MAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP 396
M A E VL V+D+ PD I + ++V T +G +A++ L H
Sbjct: 1084 MNAANAEKKMTVLLVEDN-PDINNILKSKLLRLYKVKTAYNGQEAVELLKTH-------- 1134
Query: 397 VHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRI 576
+++II+D MP M GY+L K IK S IPV++++S+ PS+
Sbjct: 1135 --------------IIDIIISDIMMPYMDGYELSKYIKTSREYSHIPVILITSQ--PSKE 1178
Query: 577 NRC--LEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQH 690
N L GAD + KP ++N ++LK++ N +H
Sbjct: 1179 NELQGLSAGADAYIEKPFTFDELNLRITNLLKAKNNIREH 1218
>gb|AAM99031.1| DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
ref|NP_687159.1| DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
ref|ZP_00788478.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
gb|EAO72763.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
Length = 223
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/148 (25%), Positives = 73/148 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+D++ +K+I L +Q T +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCLDTEE------------------ 45
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V LIITD MP M GY L+++++ S+ ++P+++M++++ + + GAD++
Sbjct: 46 ----VQLIITDIMMPMMDGYQLIQELR--SAAYNVPIIVMTAKSQMEDMTKGFGLGADDY 99
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQ 693
+KPV+L ++ +L+ QHQ
Sbjct: 100 MVKPVQLQELALRIKALLRRANIVAQHQ 127
>gb|ABA44421.1| DNA-binding response regulator [Streptococcus agalactiae A909]
emb|CAD45766.1| Unknown [Streptococcus agalactiae NEM316]
ref|YP_328847.1| DNA-binding response regulator [Streptococcus agalactiae A909]
ref|NP_734591.1| hypothetical protein gbs0121 [Streptococcus agalactiae NEM316]
ref|ZP_00790696.1| DNA-binding response regulator [Streptococcus agalactiae 515]
ref|ZP_00785910.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gb|EAO75365.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gb|EAO70560.1| DNA-binding response regulator [Streptococcus agalactiae 515]
Length = 223
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/148 (25%), Positives = 73/148 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+D++ +K+I L +Q T +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCLDTEE------------------ 45
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V LIITD MP M GY L+++++ S+ ++P+++M++++ + + GAD++
Sbjct: 46 ----VQLIITDIMMPMMDGYQLIQELR--SAAYNVPIIVMTAKSQMEDMTKGFGLGADDY 99
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQ 693
+KPV+L ++ +L+ QHQ
Sbjct: 100 MVKPVQLQELALRIKALLRRANIVAQHQ 127
>ref|ZP_00669238.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Nitrosomonas eutropha C71]
gb|EAO18744.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Nitrosomonas eutropha C71]
Length = 1716
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/142 (26%), Positives = 67/142 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
V+ VDDSL RK+ RLL+ +++ G ALQ L T+P +
Sbjct: 1597 VMIVDDSLTVRKVTSRLLERQGYEILIAKDGVGALQLLR-----ETIPAI---------- 1641
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ D MP M G++L++ ++ + L++IP++I+SS E G +EF
Sbjct: 1642 -------MLVDIEMPHMDGFELIRAVRNNPELQNIPIIIISSRTAEKHRKVAEELGVNEF 1694
Query: 610 FLKPVRLSDMNKLKPHILKSRC 675
KP + ++ + ++K C
Sbjct: 1695 MGKPYQEDELLQHIERLIKEGC 1716
>ref|NP_901248.1| probable sensory box/GGDEF family protein [Chromobacterium
violaceum ATCC 12472]
gb|AAQ59254.1| probable sensory box/GGDEF family protein [Chromobacterium
violaceum ATCC 12472]
Length = 712
Score = 60.1 bits (144), Expect = 2e-07
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P +L VDD++ ++ LL T +QV++ SG++AL H D
Sbjct: 4 PGDILVVDDTMTALMMLVALLSTQGYQVSSAQSGAEALDLALKHPPD------------- 50
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
LI+ D+ MPGM G + +++K + RDIP++ +SS + GA
Sbjct: 51 ---------LILLDFSMPGMDGLAVCRELKLNPRTRDIPILFLSSVSDSQTKVDGFAAGA 101
Query: 601 DEFFLKPVRLSD-MNKLKPHI----LKSRCNQEQHQQSDS 705
+F +KP S+ + ++ H+ LK R ++ ++++S
Sbjct: 102 VDFIIKPFERSELLARVNTHLDLARLKKRLSKLVEEKTES 141
>ref|ZP_00908285.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Clostridium beijerincki NCIMB 8052]
gb|EAP60978.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase A, N-terminal [Clostridium beijerincki NCIMB 8052]
Length = 1032
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/141 (21%), Positives = 68/141 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + + K+++ + S+++ +G AL+ + H
Sbjct: 705 ILLVDDDVCNIKVLQEIFYDSNYETLVAYNGVNALELVKKHKD----------------- 747
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++++ D MPG++GYD+ K+I++ L ++P+++++ + P I E GA++F
Sbjct: 748 ----ISIVLLDVMMPGLSGYDVCKRIRKEYKLFELPILLLTVRSTPDDIALGFEAGANDF 803
Query: 610 FLKPVRLSDMNKLKPHILKSR 672
KP ++ + K R
Sbjct: 804 LTKPFNFMELKARVTTLQKMR 824
>dbj|BAB74820.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_487161.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 382
Score = 60.1 bits (144), Expect = 2e-07
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 250 VLAVDDSLPDR-KLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
+L +DD LPD +IE LL + + V SG +A+ L L D
Sbjct: 6 ILVIDD-LPDNFDVIETLLSEQDYTLHYVASGQEAIASLNLFQPD--------------- 49
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
LI+ D MPGM G ++ ++IK + +P++++++ + RCL+ GAD+
Sbjct: 50 -------LILLDVMMPGMDGIEVCQRIKAMPQWQPVPIIMVTALTAKEDLARCLQSGADD 102
Query: 607 FFLKPVRLSDM 639
F KP+ ++
Sbjct: 103 FISKPINALEL 113
>gb|ABA24376.1| Multi-sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
ref|YP_325271.1| Multi-sensor Hybrid Histidine Kinase [Anabaena variabilis ATCC 29413]
Length = 1195
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/125 (25%), Positives = 60/125 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L +DD L + I LL++ QV ++G ++ L AN
Sbjct: 1077 ILIIDDDLRNIFAITSLLESYQMQVLFAENGRDGIELL-------------------QAN 1117
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
D+ N ++ D MP M GY+ + I++ R +P++ ++++ +P +C+E GA ++
Sbjct: 1118 SDI--NAVLMDVMMPEMDGYETTRSIRQQKQFRTLPIIALTAKAMPGDREKCIEAGASDY 1175
Query: 610 FLKPV 624
KPV
Sbjct: 1176 ITKPV 1180
Score = 47.0 bits (110), Expect = 0.002
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHT 405
V+ E H L S DRK ++RLL V ++ +G D S
Sbjct: 908 VSPEILNHTLTEIKSFIDRK-VKRLLVIEDDPV----QAQSIIELIGNGDVQSMAVNTGA 962
Query: 406 HQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
L++ +Q + I+ D +P M+G +LL++IK+ +L +P+++ + + I +
Sbjct: 963 AALEILRSQHF--DCIVLDLGLPDMSGLELLEQIKQEPNLVKLPIIVYTGKEISRQEETQ 1020
Query: 586 LEEGADEFFLK----PVRLSDMNKLKPHILKSRCNQEQHQ 693
L A+ +K P RL D L H +++ Q Q Q
Sbjct: 1021 LRRLAESIIIKNVRSPERLLDETSLFLHRVQANLPQPQRQ 1060
>ref|ZP_00539697.1| Phosphoserine phosphatase [Exiguobacterium sibiricum 255-15]
gb|EAM87107.1| Phosphoserine phosphatase [Exiguobacterium sibiricum 255-15]
Length = 367
Score = 60.1 bits (144), Expect = 2e-07
Identities = 36/130 (27%), Positives = 65/130 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + ++ERLL+ + V SG +AL+ + P+ LDV
Sbjct: 3 ILVVDDEFTNLMILERLLENEGYDVVKAMSGEEALELME--------DPLFIETLDV--- 51
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ D MPG++G D + I++ L ++P+VI+S + I L+ GA ++
Sbjct: 52 -------VLLDVEMPGISGIDATRLIRKRFGLDELPIVIVSGRSNEEDIADGLDAGASDY 104
Query: 610 FLKPVRLSDM 639
KP+R +++
Sbjct: 105 TTKPIRKTEL 114
>gb|AAS95472.1| chemotaxis protein CheV [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough]
ref|YP_010213.1| chemotaxis protein CheV [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough]
Length = 320
Score = 60.1 bits (144), Expect = 2e-07
Identities = 42/138 (30%), Positives = 69/138 (50%)
Frame = +1
Query: 208 RSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDST 387
+++ V + P HVL DDS R +I L+ + ++VT SG +A L + +D+
Sbjct: 173 KAIGTQVPSGEPDHVLIADDSASIRNMIGNTLEKAGYRVTRTASGREAWNVLLGYRRDAE 232
Query: 388 VPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIP 567
V + + V L+I+D MP M G+ L + IK+ S L+ +PVV+ SS
Sbjct: 233 ERKVPVNDI---------VQLVISDIEMPEMDGHTLTRNIKDDSILQRLPVVLFSSLITD 283
Query: 568 SRINRCLEEGADEFFLKP 621
+ ++ GAD+ KP
Sbjct: 284 ALRHKGESVGADDQISKP 301
>gb|ABA24299.1| Response Regulator Receiver Signal Transduction Histidine Kinase
[Anabaena variabilis ATCC 29413]
ref|YP_325194.1| Response Regulator Receiver Signal Transduction Histidine Kinase
[Anabaena variabilis ATCC 29413]
Length = 381
Score = 60.1 bits (144), Expect = 2e-07
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 250 VLAVDDSLPDR-KLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
+L +DD LPD +IE LL + + V SG +A+ L L D
Sbjct: 6 ILVIDD-LPDNFDVIETLLSEQDYTLHYVASGQEAIASLNLFQPD--------------- 49
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
LI+ D MPGM G ++ ++IK + +P++++++ + RCL+ GAD+
Sbjct: 50 -------LILLDVMMPGMDGIEVCQRIKAMPQWQSVPIIMVTALTAKEDLARCLKSGADD 102
Query: 607 FFLKPVRLSDM 639
F KP+ ++
Sbjct: 103 FISKPINALEL 113
>gb|ABB31631.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens GS-15]
ref|YP_384356.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens GS-15]
Length = 458
Score = 60.1 bits (144), Expect = 2e-07
Identities = 42/157 (26%), Positives = 74/157 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD L R+ + LLK + V D KAL+FL
Sbjct: 5 ILVVDDELSMREFLAILLKREGYAVDQADCAEKALEFL---------------------- 42
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +L+I+D MPG+ G LL +IKE+S D V++M++ + + ++ GA ++
Sbjct: 43 DSITYDLVISDVKMPGLDGIALLGRIKENSP--DTAVLMMTAFSTAEQAVEAMKLGAYDY 100
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGER 720
KP ++ ++ L + L+ R + ++Q+ ER
Sbjct: 101 IAKPFKVEEVKVLVRNALEKRDLKRENQRLRQEVQER 137
>ref|ZP_00581775.1| Response regulator receiver:CheW-like protein [Shewanella baltica
OS155]
gb|EAN43769.1| Response regulator receiver:CheW-like protein [Shewanella baltica
OS155]
Length = 326
Score = 60.1 bits (144), Expect = 2e-07
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDS RK+IE L+++ + + T G AL+ L + + A
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEML--------------MEFESLAE 241
Query: 430 QDVA-----VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 594
QD A V+ +ITD MP M G L+K+++ES + + +P+V+ SS + +
Sbjct: 242 QDNASISDFVSAVITDVEMPRMDGMHLVKRLRESKAYQQMPIVMFSSLMSEDNRTKAMAL 301
Query: 595 GADEFFLKP 621
GA++ KP
Sbjct: 302 GANDTITKP 310
>gb|ABA21942.1| Two Component Transcriptional Regulator, LuxR family [Anabaena
variabilis ATCC 29413]
ref|YP_322837.1| Two Component Transcriptional Regulator, LuxR family [Anabaena
variabilis ATCC 29413]
Length = 245
Score = 60.1 bits (144), Expect = 2e-07
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Frame = +1
Query: 241 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 420
P +L VDD L R I L+ S + V T + G +AL + ++ D
Sbjct: 20 PLTILVVDDDLGTRLSISDYLELSGYSVITANDGQEALTMVEVYHPD------------- 66
Query: 421 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 600
LI+TD MP M GY+L++++++ R +PV+++++ + G
Sbjct: 67 ---------LIVTDIVMPRMNGYELVRRVRQQPPFRLLPVILLTARTRTQERILGYQSGC 117
Query: 601 DEFFLKPVRLSDMNKLKPHIL-KSRCNQEQHQ--QSDSHSGERRNPTISSSDSINNRKRK 771
D + KP L ++ ++L +S+ Q +++ Q D+ + + S S+ K
Sbjct: 118 DLYLPKPFELEELAAAIHNLLERSQIIQSEYRFSQKDNSGSPLPSKIVESHHSVFTHVEK 177
Query: 772 GAGTEEILPQ 801
+ P+
Sbjct: 178 SHLLSSLTPR 187
>ref|YP_001993.1| response regulator [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gb|AAS70630.1| response regulator [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 201
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/125 (25%), Positives = 65/125 (52%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + + + ++L V + G+ AL+ L + N
Sbjct: 83 ILLVDDDMRNVFALSKILSEKGMNVLKAEDGNSALELL-------------------SKN 123
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+DV +L++ D MP M GY+ +KKI+E S +++ ++ ++++ + + +C+E GA+++
Sbjct: 124 EDV--DLVLMDIMMPEMDGYETMKKIREISKYKNLTIIALTAKAMQNDRQKCIEAGANDY 181
Query: 610 FLKPV 624
KPV
Sbjct: 182 IPKPV 186
>gb|AAN48944.1| two-component hybrid sensor and regulator [Leptospira interrogans
serovar Lai str. 56601]
ref|NP_711926.1| two-component hybrid sensor and regulator [Leptospira interrogans
serovar Lai str. 56601]
Length = 1207
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/125 (25%), Positives = 65/125 (52%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + + + ++L V + G+ AL+ L + N
Sbjct: 1089 ILLVDDDMRNVFALSKILSEKGMNVLKAEDGNSALELL-------------------SKN 1129
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+DV +L++ D MP M GY+ +KKI+E S +++ ++ ++++ + + +C+E GA+++
Sbjct: 1130 EDV--DLVLMDIMMPEMDGYETMKKIREISKYKNLTIIALTAKAMQNDRQKCIEAGANDY 1187
Query: 610 FLKPV 624
KPV
Sbjct: 1188 IPKPV 1192
Score = 38.1 bits (87), Expect = 0.85
Identities = 23/127 (18%), Positives = 60/127 (47%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
++L ++D RK++ +L+ + DSG +AL+ + D
Sbjct: 942 NLLIIEDDFNSRKMMLKLIGNGDVKCFEADSGKEALRVYAENHFDC-------------- 987
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
I+ D +P M+G++L++++++ + R P+VI + + + ++ L++ ++
Sbjct: 988 --------IVLDIGLPDMSGFELIQEMEKIKNGRIPPIVIYTGKELTKEEDKELQKYSES 1039
Query: 607 FFLKPVR 627
+K ++
Sbjct: 1040 IIIKGIK 1046
Score = 37.0 bits (84), Expect = 1.9
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 451 IITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRL 630
II D +PG+ G +L ++K S+R IPV I+S+ + + GA E KP+
Sbjct: 866 IILDLDLPGIKGQTVLNELKADQSIRHIPVHIVSANEYSLEL---IRGGAVEHIRKPIHK 922
Query: 631 SDMNK 645
++++
Sbjct: 923 KELDE 927
>ref|NP_912485.1| Putative response regulator 10 [Oryza sativa (japonica
cultivar-group)]
gb|AAN52739.1| Putative response regulator 10 [Oryza sativa (japonica
cultivar-group)]
Length = 691
Score = 60.1 bits (144), Expect = 2e-07
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +++R+L + TT ++AL L + +
Sbjct: 18 VLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRR----------------- 60
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++II+D MP M G+ LL+ + D+PV++MS+++ + + ++ GA ++
Sbjct: 61 ---GFDVIISDVHMPDMDGFRLLELVGLEM---DLPVIMMSADSRTDIVMKGIKHGACDY 114
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQ-EQHQQSDS-HSGERRNPTISSSD 747
+KPVR+ ++ + H+++ + N+ ++H+ S S +R PT + ++
Sbjct: 115 LIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNE 162
>ref|ZP_00561512.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Histidine
kinase internal region [Desulfitobacterium hafniense
DCB-2]
gb|EAM94688.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Histidine
kinase internal region [Desulfitobacterium hafniense
DCB-2]
Length = 561
Score = 60.1 bits (144), Expect = 2e-07
Identities = 35/132 (26%), Positives = 66/132 (50%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
F +L VDD + K + +L + + VT +G AL H L A
Sbjct: 285 FSILVVDDEFSNLKALMNILTLNQYNVTVAINGEAAL-----------------HLLKGA 327
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
+ D L I D MPG++GY++ +KI+E+ S ++P+++++++ +P + GA+
Sbjct: 328 FHYD----LCILDVMMPGISGYEVCRKIRETYSPLELPILLLTAKALPEDMEAGFRAGAN 383
Query: 604 EFFLKPVRLSDM 639
+F KP + ++
Sbjct: 384 DFIEKPFEVREL 395
>ref|ZP_00836035.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Shewanella sp. PV-4]
gb|EAP04105.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase A, N-terminal:Hpt
[Shewanella sp. PV-4]
Length = 916
Score = 60.1 bits (144), Expect = 2e-07
Identities = 41/140 (29%), Positives = 61/140 (43%)
Frame = +1
Query: 205 FRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDS 384
F+ + P VLAVDD+ + KLI+ LLK QVT D+G +A++ D
Sbjct: 656 FQEAVKETQEREPMSVLAVDDNPANLKLIKTLLKELVTQVTVTDNGQEAVEIAKAKSFD- 714
Query: 385 TVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENI 564
LI D MPG G+ K+I+E S R+ P+V +++ I
Sbjct: 715 ---------------------LIFMDIQMPGTDGFSATKQIREHSLNRNTPIVAVTAHAI 753
Query: 565 PSRINRCLEEGADEFFLKPV 624
R + G D + KP+
Sbjct: 754 AEERERIDQSGMDGYLPKPI 773
>ref|YP_233600.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Pseudomonas syringae pv. syringae B728a]
gb|AAY35562.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Pseudomonas syringae pv. syringae B728a]
Length = 1992
Score = 60.1 bits (144), Expect = 2e-07
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Frame = +1
Query: 205 FRSVMAAVATET----PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLH 372
FR +MA E P V+ VDDS+ RK+ RLL+ V T G A+ L H
Sbjct: 1854 FRGLMAPAYHEVEHARPLLVMVVDDSVTVRKVTSRLLERHGMHVLTAKDGVDAMTLLQEH 1913
Query: 373 DQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMS 552
D +++ D MP M G+++ +I++ L+D+P+++++
Sbjct: 1914 TPD----------------------IMLLDIEMPRMDGFEVASQIRQDEQLKDLPIIMIT 1951
Query: 553 SENIPSRINRCLEEGADEFFLKP 621
S + +R + G +E+ KP
Sbjct: 1952 SRSGQKHRDRAMAVGVNEYLSKP 1974
>ref|ZP_00505381.1| Response regulator receiver [Polaromonas sp. JS666]
gb|EAM40241.1| Response regulator receiver [Polaromonas sp. JS666]
Length = 159
Score = 60.1 bits (144), Expect = 2e-07
Identities = 42/141 (29%), Positives = 74/141 (52%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + +L+E+LL + + T V S L+ GLH + H+ D
Sbjct: 12 ILVVDDQAANVQLLEQLLSNTGY--TRVRSTMNPLEVAGLHAE---------HRYD---- 56
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
LI+ D MPGM G+ +++++K+++S +PV+++++E P R LE GA +F
Sbjct: 57 ------LILLDLKMPGMDGFQVMQELKKNTSDDYLPVIVLTAE--PGHKLRALEAGAKDF 108
Query: 610 FLKPVRLSDMNKLKPHILKSR 672
KP L ++ ++L+ R
Sbjct: 109 ISKPFDLVEVKTRIHNMLEVR 129
>gb|EAN28112.1| Response regulator receiver [Magnetococcus sp. MC-1]
ref|ZP_00607494.1| Response regulator receiver [Magnetococcus sp. MC-1]
Length = 311
Score = 59.7 bits (143), Expect = 3e-07
Identities = 38/124 (30%), Positives = 65/124 (52%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VLAVDD + +LIE LL ++V G++AL +L +++ T+P V
Sbjct: 17 VLAVDDDPLNLELIEELLDEVGYEVHLAKDGTEALAWL---EKNPTLPDV---------- 63
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ D MPG+ G ++LK++K+S+ L IPV+ ++++ + LE GA +
Sbjct: 64 -------VLLDRMMPGLDGIEVLKQMKQSAQLDRIPVIFQTAKSSEDAVREGLEAGAFYY 116
Query: 610 FLKP 621
KP
Sbjct: 117 ITKP 120
>ref|ZP_00665369.1| PAS [Syntrophobacter fumaroxidans MPOB]
gb|EAO22048.1| PAS [Syntrophobacter fumaroxidans MPOB]
Length = 870
Score = 59.7 bits (143), Expect = 3e-07
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD +RKL++ L+ + +V D+G ALQ A
Sbjct: 642 VLVVDDLDLNRKLVKEFLQNTRVEVIEADNGQTALQ----------------------AA 679
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +LI+ D MPGM GY L++++ + R IPVV +++ + I R G D +
Sbjct: 680 ETANPDLILMDIRMPGMDGYQALRRLRRNPGTRRIPVVALTASGMKEEIERLERSGFDGW 739
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPT-ISSSDSINN 759
++P KP +LK +++ + +R + ++S+DS+++
Sbjct: 740 LVRPFS-------KPELLKELHQFIHDRKARTIPAKRPQASGLASADSVSS 783
>ref|ZP_01094091.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
gb|EAQ77211.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
Length = 539
Score = 59.7 bits (143), Expect = 3e-07
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 28/223 (12%)
Frame = +1
Query: 238 TPFHVLAVDDSLPDRKLIERLLK---TSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTH 408
T VL VDD+ DR+++ L+ T +++ ++G K LQ
Sbjct: 6 TKRRVLIVDDNPQDREMVRLALRSDRTRRYELVEAENGEKGLQTF--------------- 50
Query: 409 QLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCL 588
D +LII D+ +P M G ++ ++ S + +PVV+++S IP + L
Sbjct: 51 -----RQADKPFDLIILDWRLPDMNGVQFVEHLQGSHRIPPVPVVLLTSSEIPQESSDPL 105
Query: 589 EEGADEFFLKPVRLSDM------NKLKPHIL------------KSRCNQEQHQQSDSH-- 708
+ G EFFLK + S++ N ++ H L ++R + ++ SH
Sbjct: 106 QHGIQEFFLKSMVTSELLSHVANNAMERHRLLVRTIASEIEAEEARNRADAANRAKSHFL 165
Query: 709 ---SGERRNP--TISSSDSINNRKRKGAGTEEILPQLANRSRH 822
S E RNP I + K +++L +A RH
Sbjct: 166 ATMSHELRNPLTAILGMTELLQEDPKPEDRQQMLEMIAENGRH 208
Score = 47.4 bits (111), Expect = 0.001
Identities = 35/132 (26%), Positives = 63/132 (47%)
Frame = +1
Query: 244 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 423
F +L +D+ ++ LI R+L+ + ++ V +G A+ + V H LD
Sbjct: 410 FRILVAEDTPANQFLIRRMLERTHAKLFFVPNGEDAV---------NEVRTAHELGLDY- 459
Query: 424 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 603
LI+ D MP M GY ++KI+E+ + P+V +++ + RC E G +
Sbjct: 460 -------QLILMDMQMPVMDGYTAVQKIRETD--QQTPIVAITASAMAGDRQRCEEAGCN 510
Query: 604 EFFLKPVRLSDM 639
E+ KP S++
Sbjct: 511 EYVSKPFDRSEL 522
>ref|ZP_00523946.1| Response regulator receiver [Solibacter usitatus Ellin6076]
gb|EAM56978.1| Response regulator receiver [Solibacter usitatus Ellin6076]
Length = 136
Score = 59.7 bits (143), Expect = 3e-07
Identities = 28/107 (26%), Positives = 58/107 (54%)
Frame = +1
Query: 352 LQFLGLHDQDSTVPPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRD 531
+ FLG+ + + + + + D VN+I+TD MP M G++L+++++ L +
Sbjct: 28 IAFLGIPNVAVLLTESAVEAMRILDSGDAHVNVIVTDLNMPRMDGFELIRRVRADCRLAN 87
Query: 532 IPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSR 672
+P++++S++ P+ +R E G D FF KP + + + +L R
Sbjct: 88 LPIIVVSADTDPTTPSRVAELGVDAFFPKPFSPAQVRRKLEQLLDGR 134
>ref|ZP_00552387.1| Helix-turn-helix, Fis-type [Desulfuromonas acetoxidans DSM 684]
gb|EAM70105.1| Helix-turn-helix, Fis-type [Desulfuromonas acetoxidans DSM 684]
Length = 447
Score = 59.7 bits (143), Expect = 3e-07
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD R++++ L ++V T +G +AL+ +
Sbjct: 3 ILVVDDEQVQREMLQGFLNKRGYKVLTASNGEEALELCARYP------------------ 44
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L++ D CMPG+ G ++L+K++ES+ L + V+++++ + ++ GA +F
Sbjct: 45 ----ISLVLMDLCMPGLNGDEVLEKLRESNPL--LRVILITAFGSVETAVKVMKLGASDF 98
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQ-------HQQSDSHSGERRNPTISSSDSINN 759
KPV D+ +L I RC Q+Q + D E P +SS+++ +
Sbjct: 99 LEKPV---DLTELAQRI--ERCEQQQLIEQDLSEMEQDLEDDELPLPVAASSEAMQH 150
>ref|ZP_00679149.1| Response regulator receiver:Metal-dependent phosphohydrolase, HD
subdomain [Pelobacter propionicus DSM 2379]
gb|EAO35265.1| Response regulator receiver:Metal-dependent phosphohydrolase, HD
subdomain [Pelobacter propionicus DSM 2379]
Length = 365
Score = 59.7 bits (143), Expect = 3e-07
Identities = 43/132 (32%), Positives = 68/132 (51%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
+E+P ++ VDD + + LL+ S F VT+ SG A++ Q T P
Sbjct: 3 SESPGNIFIVDDDRYVLESVSILLRESGFSVTSFSSGHDAIR------QFVTEP------ 50
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
V+LI+TD MPGMTG +LL+KI+ R+ PV++M++ R ++
Sbjct: 51 ----------VDLILTDINMPGMTGIELLEKIRYLD--RETPVLLMTAYADLDTAVRAIQ 98
Query: 592 EGADEFFLKPVR 627
+GA +F +KP R
Sbjct: 99 KGAFDFIIKPYR 110
>ref|ZP_00591543.1| Response regulator receiver [Prosthecochloris aestuarii DSM 271]
gb|EAN23235.1| Response regulator receiver [Prosthecochloris aestuarii DSM 271]
Length = 122
Score = 59.7 bits (143), Expect = 3e-07
Identities = 37/138 (26%), Positives = 66/138 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L +DDS R+L+ L F+V D+ + AL+ L
Sbjct: 6 ILIIDDSASIRRLLAHNLG-KRFEVLVADNANHALELL---------------------E 43
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
Q V +L I D MPGM G+ L++++K+ S IP++++++ + + + L+ GAD++
Sbjct: 44 QGVTPDLAIVDVAMPGMDGFSLVERLKKDPSYSTIPIIMLTARDESADKEKGLKLGADDY 103
Query: 610 FLKPVRLSDMNKLKPHIL 663
KP D+ H+L
Sbjct: 104 LTKPFNTEDLADRIEHLL 121
>emb|CAD16788.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY (SENSOR HISTIDINE KINASE
AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR
PROTEIN [Ralstonia solanacearum]
ref|NP_521200.1| PROBABLE COMPOSITE TWO COMPONENT REGULATORY (SENSOR HISTIDINE KINASE
AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR
PROTEIN [Ralstonia solanacearum GMI1000]
Length = 994
Score = 59.7 bits (143), Expect = 3e-07
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Frame = +1
Query: 223 AVATETP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPV 399
A A ETP H+L +D +R+LI R L+ ++VT + G+ ALQ L
Sbjct: 727 APAAETPGMHILVAEDHPINRELITRQLRLLGYRVTLAEDGAAALQRL------------ 774
Query: 400 HTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSL----RDIPVVIMSSENIP 567
+ + ++TD CMP + G+DL ++I++ R +P++ +++ +
Sbjct: 775 ----------CETRFDALLTDCCMPRLDGFDLARQIRQREQQAPGGRRLPILAITATTLA 824
Query: 568 SRINRCLEEGADEFFLKPVRLSDM 639
RC G D + LKP L+ +
Sbjct: 825 EEHARCRTVGMDGYVLKPTTLATL 848
>gb|AAW88094.1| transcriptional regulator [Vibrio fischeri ES114]
ref|YP_206982.1| transcriptional regulator [Vibrio fischeri ES114]
Length = 505
Score = 59.3 bits (142), Expect = 4e-07
Identities = 44/152 (28%), Positives = 74/152 (48%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L V+D KL++ LK S+F +T +G +ALQFL
Sbjct: 144 HILIVEDDAIQSKLLQAYLK-SNFSITATTNGREALQFL--------------------- 181
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
Q V+LII+D MP M+G +L ++++ ++ IP + +S+ + +N E G D+
Sbjct: 182 -QHNTVDLIISDIQMPEMSGLELRSQLEKENNF-SIPFIFLSNLQDTNTVNCAAELGIDD 239
Query: 607 FFLKPVRLSDMNKLKPHILKSRCNQEQHQQSD 702
F KPV+ + + +L R +Q H S+
Sbjct: 240 FLQKPVQKTQLIHSITRVL-GRFHQVYHALSE 270
>ref|ZP_00624483.1| GGDEF [Nitrobacter hamburgensis X14]
gb|EAN63162.1| GGDEF [Nitrobacter hamburgensis X14]
Length = 457
Score = 59.3 bits (142), Expect = 4e-07
Identities = 38/125 (30%), Positives = 61/125 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD + KL+E L F V T +G++AL+ D
Sbjct: 5 VLVVDDIPANVKLLEARLSAEYFDVMTASNGAQALEICARAKCD---------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++ D MP M G+++ +++K + + IPVV++++ + PS R LE GAD+F
Sbjct: 49 ------IVLLDIMMPDMDGFEVCRRLKANPATHFIPVVMVTALDSPSDRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
Score = 34.7 bits (78), Expect = 9.4
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = +1
Query: 406 HQLDVAANQDVAV--------NLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSEN 561
H +DV + A+ +L+I + G L + + R +P++ ++ N
Sbjct: 179 HTVDVETDPSEALFHAAENSYDLLIVSLGLENFDGLRLCSQARSLERTRHVPILAIADAN 238
Query: 562 IPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSD 702
+R+ R LE G +++ L+PV D N+L + +SR + + +D
Sbjct: 239 SNTRLLRGLEIGVNDYLLRPV---DKNEL---LARSRTQIRRRRYTD 279
>gb|AAR34692.1| response regulator [Geobacter sulfurreducens PCA]
ref|NP_952369.1| response regulator [Geobacter sulfurreducens PCA]
Length = 324
Score = 59.3 bits (142), Expect = 4e-07
Identities = 41/129 (31%), Positives = 65/129 (50%)
Frame = +1
Query: 238 TPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLD 417
T VL VD+S P R I L+ + VT+V SG +A+ H+++
Sbjct: 5 TEIQVLVVDESAPSRAFIASTLENGGYIVTSVASGEEAV-----------------HEVN 47
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEG 597
A ++++TD +PGM+G +LLK +K+ S D+ VVI++S + L G
Sbjct: 48 AA-----PFDILVTDINLPGMSGLNLLKLLKD--SFPDLEVVIVTSNASSFTAIKALRLG 100
Query: 598 ADEFFLKPV 624
A +F +KPV
Sbjct: 101 AYDFIIKPV 109
>emb|CAC49922.1| putative two-component response regulator protein [Sinorhizobium
meliloti 1021]
ref|NP_438062.1| putative two-component response regulator protein [Sinorhizobium
meliloti 1021]
Length = 309
Score = 59.3 bits (142), Expect = 4e-07
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDDS + L+ S F V SG+ AL D P
Sbjct: 13 VLLVDDSPEALGFLTEALEQSGFSVLIATSGNAALNIA-----DRITP------------ 55
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++I+ D MPGM G+D ++K ++S+ +PVV M+ + R LE G ++
Sbjct: 56 -----DIILLDAVMPGMDGFDTCTRLKANASVAQVPVVFMTGLTETEHVVRALEAGGVDY 110
Query: 610 FLKPVRLSDMN-KLKPHILKSRCNQEQHQQSDS 705
KP+ + ++ +++ H+ +R Q D+
Sbjct: 111 LTKPINIDELRARIRVHLSNARSAQSARVALDA 143
>ref|ZP_01013657.1| response regulator [Rhodobacterales bacterium HTCC2654]
gb|EAQ12328.1| response regulator [Rhodobacterales bacterium HTCC2654]
Length = 433
Score = 59.3 bits (142), Expect = 4e-07
Identities = 37/125 (29%), Positives = 63/125 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDDS R+++ L F V +SG +AL LG TH
Sbjct: 23 VLVVDDSRAQRRVLVATLTRLGFDVIEAESGEEALLILG-----------STH------- 64
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++L+++D+ MPGMTG +L ++ ++ + ++++S+N + R L+ GAD+F
Sbjct: 65 ----IDLVLSDWMMPGMTGLELCRQFRKMPRDQYGYFILLTSKNEKGAVARGLDIGADDF 120
Query: 610 FLKPV 624
KP+
Sbjct: 121 LTKPI 125
>emb|CAI07070.1| type IV pilus response regulator PilH [Azoarcus sp. EbN1]
ref|YP_157971.1| type IV pilus response regulator PilH [Azoarcus sp. EbN1]
Length = 121
Score = 59.3 bits (142), Expect = 4e-07
Identities = 35/125 (28%), Positives = 59/125 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDDS +R + LL +QV T ++G A +A +
Sbjct: 6 ILVVDDSPTERFALTELLSARGYQVVTAENGEDA----------------------IAKS 43
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +LI+ D MPG+ GY + I S S R IP++I +S+ + + + +GA ++
Sbjct: 44 KSEMPDLILMDVVMPGINGYQATRMIARSESTRSIPIIICTSKGLETDRIWGMRQGAHDY 103
Query: 610 FLKPV 624
+KPV
Sbjct: 104 LVKPV 108
>ref|ZP_00673365.1| Response regulator receiver [Trichodesmium erythraeum IMS101]
gb|EAO27755.1| Response regulator receiver [Trichodesmium erythraeum IMS101]
Length = 121
Score = 59.3 bits (142), Expect = 4e-07
Identities = 37/130 (28%), Positives = 64/130 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+DS+ R++I +LLK S VT + G +AL L
Sbjct: 4 VLVVEDSVTQREMISQLLKNSGLAVTVANDGVEALGRL---------------------- 41
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ ++++ D MP M GY++ ++IK + IPVV+ SS+ L++GAD +
Sbjct: 42 KNTKPDIVVLDIVMPKMNGYEVCRRIKSDPQTKHIPVVMCSSKGEEFDRYWGLKQGADAY 101
Query: 610 FLKPVRLSDM 639
KP + +++
Sbjct: 102 IAKPFQPTEL 111
>ref|ZP_01152779.1| Response regulator receiver [Halorhodospira halophila SL1]
gb|EAR45514.1| Response regulator receiver [Halorhodospira halophila SL1]
Length = 133
Score = 59.3 bits (142), Expect = 4e-07
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQ-VTTVDSGSKALQFLGLHDQDSTVPPVH 402
+A + +L VDD R++I+ LL+ + V D G+ AL L
Sbjct: 1 MAADKNIKILVVDDFSTMRRIIKNLLRELGYNNVVEADDGNTALPIL------------- 47
Query: 403 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 582
Q + +ITD+ MPGMTG +LLK ++ +L+D+P +++++E +I
Sbjct: 48 ---------QKGGIQFLITDWNMPGMTGLELLKHVRADPNLKDLPTLMVTAEAKREQIME 98
Query: 583 CLEEGADEFFLKP 621
+ G + + +KP
Sbjct: 99 AAQAGVNGYIVKP 111
>ref|ZP_00533550.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
gb|EAM62085.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal [Chlorobium
phaeobacteroides BS1]
Length = 369
Score = 58.9 bits (141), Expect = 5e-07
Identities = 38/146 (26%), Positives = 68/146 (46%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L VDD + +++ LLK + ++ V +G ALQ + +P
Sbjct: 14 ILIVDDIPDNLRVLSNLLKENGYRTRPVPNGKLALQVA-----EKEMP------------ 56
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+LI+ D MP M G+++ ++K++ L+DIPV+ +S+ N P I R L G ++
Sbjct: 57 -----DLILLDIMMPDMDGFEVSNQLKKNKKLKDIPVIFISALNEPKDIVRALSSGGVDY 111
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQ 687
KP ++ LK R ++
Sbjct: 112 ITKPFNAKEVRARVATHLKIRWQNKE 137
>ref|ZP_00818151.1| Response regulator receiver:Protein phosphatase 2C-like
[Marinobacter aquaeolei VT8]
gb|EAO98621.1| Response regulator receiver:Protein phosphatase 2C-like
[Marinobacter aquaeolei VT8]
Length = 612
Score = 58.9 bits (141), Expect = 5e-07
Identities = 36/137 (26%), Positives = 63/137 (45%)
Frame = +1
Query: 211 SVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTV 390
S +A A P VL +DS DR ++ RL+K V + G++A+
Sbjct: 28 SSCSAFAEAIPLKVLLAEDSASDRLILARLVKRLGHTVIEAEDGTEAVDLF--------- 78
Query: 391 PPVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPS 570
++ +L++ D MP M G + ++IK + R +P++ ++S +
Sbjct: 79 -------------RETQPDLVLLDALMPRMDGMEAARQIKALAGERLVPLIFLTSLSGAG 125
Query: 571 RINRCLEEGADEFFLKP 621
+ RCLE G D+F +KP
Sbjct: 126 DLARCLEAGGDDFLVKP 142
>ref|ZP_00315526.1| COG0642: Signal transduction histidine kinase [Microbulbifer
degradans 2-40]
Length = 1526
Score = 58.9 bits (141), Expect = 5e-07
Identities = 32/136 (23%), Positives = 65/136 (47%)
Frame = +1
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQ 411
T +H+L VDD +RK++ L + V V SG +A+ ++
Sbjct: 1140 TARTYHILIVDDEPVNRKVLANYLSLKYYTVHEVRSGMEAITYV---------------- 1183
Query: 412 LDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLE 591
V+LI+ D MP M+GY+ K++++ S ++P++++++ + S +
Sbjct: 1184 -----RNGPKVDLILLDIMMPKMSGYEACKQLRQQYSANELPIILLTARSQVSDLVTGFN 1238
Query: 592 EGADEFFLKPVRLSDM 639
GA++F KP+ ++
Sbjct: 1239 SGANDFITKPIAKEEL 1254
>gb|ABA23581.1| Response Regulator Receiver Signal Transduction Histidine Kinase
[Anabaena variabilis ATCC 29413]
ref|YP_324476.1| Response Regulator Receiver Signal Transduction Histidine Kinase
[Anabaena variabilis ATCC 29413]
Length = 431
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/141 (29%), Positives = 66/141 (46%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+LAVDD+ + +++ L SSF+V SG KALQ L
Sbjct: 21 ILAVDDNPNNLQVLSSFLDNSSFEVWAARSGEKALQRL---------------------E 59
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
D+ +LI+ D MPGM G++ +++K DIPVV M++ + + + GA ++
Sbjct: 60 NDLLPDLILLDVMMPGMDGFETCQRLKSDQRFCDIPVVFMTALSETEDKVKGFQLGAVDY 119
Query: 610 FLKPVRLSDMNKLKPHILKSR 672
KP + ++ H LK R
Sbjct: 120 ITKPFQHEEVLVRIEHQLKLR 140
>dbj|BAB73345.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_485431.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 431
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/141 (29%), Positives = 67/141 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+LAVDD+ + +++ L SSF+V SG KALQ L
Sbjct: 21 ILAVDDNPNNLQVLSSFLDDSSFEVWAARSGEKALQRL---------------------E 59
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
D+ +LI+ D MPGM G++ +++K DIPVV M++ + + + + GA ++
Sbjct: 60 NDLLPDLILLDIMMPGMDGFETCQRLKSDQRFCDIPVVFMTALSETADKVKGFQLGAVDY 119
Query: 610 FLKPVRLSDMNKLKPHILKSR 672
KP + ++ H LK R
Sbjct: 120 ITKPFQHEEVLVRIEHQLKLR 140
>ref|ZP_00836705.1| Response regulator receiver:CheW-like protein [Shewanella sp. PV-4]
gb|EAP03294.1| Response regulator receiver:CheW-like protein [Shewanella sp. PV-4]
Length = 306
Score = 58.9 bits (141), Expect = 5e-07
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Frame = +1
Query: 235 ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
E +H++ +DDS RK I R L++ S Q+ T G +AL L +
Sbjct: 176 ERHYHIMVIDDSAVARKQIIRALESLSLQIDTAKDGREALDKL----------------V 219
Query: 415 DVAANQDVAVN---LIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
VAA D + LII+D MP M GY L +I+++ L+DI VV+ +S + N+
Sbjct: 220 SVAAEMDNVAHEIPLIISDIEMPEMDGYTLTAEIRDNPKLKDIKVVLHTS--LSGVFNQA 277
Query: 586 LEE--GADEFFLK 618
+ E GA++F K
Sbjct: 278 MVEKVGANDFIAK 290
>ref|ZP_01047197.1| two component diguanylate cyclase [Nitrobacter sp. Nb-311A]
gb|EAQ34779.1| two component diguanylate cyclase [Nitrobacter sp. Nb-311A]
Length = 457
Score = 58.9 bits (141), Expect = 5e-07
Identities = 38/125 (30%), Positives = 62/125 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD + +L+E L F V T +G++AL+ + D
Sbjct: 5 VLVVDDIPANVRLLEARLSAEYFDVITASNGAQALETCARAECD---------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+ D MP M G+++ +++K + + IPVV++++ + PS R LE GAD+F
Sbjct: 49 ------IILLDVMMPDMDGFEVCRRLKANPATHFIPVVMVTALDSPSDRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>dbj|BAB73582.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
ref|NP_485923.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 1194
Score = 58.9 bits (141), Expect = 5e-07
Identities = 32/125 (25%), Positives = 59/125 (47%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L +DD L + I LL++ QV ++G + L AN
Sbjct: 1076 ILIIDDDLRNIFAITSLLESYQMQVLFAENGRDGIDIL-------------------QAN 1116
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
D+ N ++ D MP M GY+ + I++ R +P++ ++++ +P +C+E GA ++
Sbjct: 1117 PDI--NAVLMDVMMPEMDGYETTRSIRQQKQFRTLPIIALTAKAMPGDREKCIEAGASDY 1174
Query: 610 FLKPV 624
KPV
Sbjct: 1175 ITKPV 1179
Score = 49.3 bits (116), Expect = 4e-04
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +1
Query: 226 VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHT 405
V+ E H L S DRK ++RLL V ++ +G D S
Sbjct: 907 VSPEILNHTLTEIKSFIDRK-VKRLLVIEDDPV----QAQSIIELIGNGDVQSIAVNTGA 961
Query: 406 HQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
LD+ +Q + I+ D +P M+G LL++IK+ SL +P+++ + + I +
Sbjct: 962 AALDILRSQHF--DCIVLDLGLPDMSGLQLLEQIKQEPSLLKLPIIVYTGKEISRQEETQ 1019
Query: 586 LEEGADEFFLK----PVRLSDMNKLKPHILKSRCNQEQHQ 693
L A+ +K P RL D L H +++ Q Q Q
Sbjct: 1020 LRRLAESIIIKNVRSPERLLDETSLFLHRVQANLPQPQRQ 1059
>emb|CAI86032.1| putative response regulator [Pseudoalteromonas haloplanktis TAC125]
ref|YP_339475.1| response regulator [Pseudoalteromonas haloplanktis TAC125]
Length = 549
Score = 58.9 bits (141), Expect = 5e-07
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
H+L VDD +R L++RLL + V+ +G AL+ L
Sbjct: 3 HILVVDDQALNRILLQRLLTQEGYTVSLAYNGVAALKILS-------------------- 42
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+++++ D MP M G++ K IK+ + +P++ +++ + + RCL G D+
Sbjct: 43 --QTPIDIVLLDVVMPIMDGFETAKIIKQRFNDIHLPIIFITALDDHASFERCLAVGGDD 100
Query: 607 FFLKPVRLSDMN-KLKPHILKSRCNQEQHQQS---DSHSGER 720
F KP ++ K+K H +++ +QQ + H +R
Sbjct: 101 FIQKPFEKVILHAKIKAHCRTRELSKKANQQKILLEEHQNQR 142
>ref|ZP_00552501.1| GGDEF [Desulfuromonas acetoxidans DSM 684]
gb|EAM69984.1| GGDEF [Desulfuromonas acetoxidans DSM 684]
Length = 370
Score = 58.9 bits (141), Expect = 5e-07
Identities = 43/151 (28%), Positives = 68/151 (45%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+DS +E+L + V D S+AL +L
Sbjct: 11 ILVVEDSYTQALKLEQLFEEEGLSVACADGASRALLWL---------------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
++ LII+D MP M G++L ++IK R +PVV+++ + P I R LE GAD F
Sbjct: 49 ENYRPALIISDVVMPDMDGFELCRQIKGHVETRHVPVVLLTRLSEPEDIVRGLECGADHF 108
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQQSD 702
KP S + +IL ++ + Q + D
Sbjct: 109 VTKPFDCSLLVSQVHNILLNQKIRSQQRNDD 139
>gb|AAT41921.1| putative chemotaxis protein [Fremyella diplosiphon]
Length = 121
Score = 58.9 bits (141), Expect = 5e-07
Identities = 36/130 (27%), Positives = 65/130 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL V+DS+ R++I LLK S VT G +AL+ + + PP
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHASDGVEALEAI------QSTPP----------- 46
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+L++ D MP M GY++ +++K +++PVV+ SS+ +++GAD +
Sbjct: 47 -----DLVVLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAY 101
Query: 610 FLKPVRLSDM 639
KP + +++
Sbjct: 102 IAKPFQPTEL 111
>ref|NP_070302.1| response regulator [Archaeoglobus fulgidus DSM 4304]
gb|AAB89775.1| response regulator [Archaeoglobus fulgidus DSM 4304]
Length = 133
Score = 58.9 bits (141), Expect = 5e-07
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +1
Query: 412 LDVAANQDVAVN--------LIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIP 567
LDVA + + A++ LI+ D +P ++G+++LK +K L+ IPVV+++S
Sbjct: 30 LDVAKDGEEAISYLQENKPVLILLDLKLPKVSGFEVLKWVKSKERLKRIPVVVLTSSRNG 89
Query: 568 SRINRCLEEGADEFFLKPVRLSDMNKLKPHI 660
INR + GA+ + +KPVR D+ L H+
Sbjct: 90 EDINRAYDLGANSYLVKPVRFEDLLNLTKHM 120
>ref|ZP_00783289.1| DNA-binding response regulator [Streptococcus agalactiae H36B]
gb|EAO77970.1| DNA-binding response regulator [Streptococcus agalactiae H36B]
Length = 223
Score = 58.9 bits (141), Expect = 5e-07
Identities = 37/148 (25%), Positives = 72/148 (48%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L V+D++ +K+I L +Q T +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCLDTEE------------------ 45
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
V LIITD MP M GY L+++++ S+ ++P+++M++++ + + G D++
Sbjct: 46 ----VQLIITDIMMPMMDGYQLIQELR--SAAYNVPIIVMTAKSQMEDMTKGFGLGXDDY 99
Query: 610 FLKPVRLSDMNKLKPHILKSRCNQEQHQ 693
+KPV+L ++ +L+ QHQ
Sbjct: 100 MVKPVQLQELALRIKALLRRANIVAQHQ 127
>gb|EAO24518.1| Response regulator receiver [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
ref|ZP_00662947.1| Response regulator receiver [Syntrophomonas wolfei str. Goettingen]
Length = 124
Score = 58.9 bits (141), Expect = 5e-07
Identities = 33/124 (26%), Positives = 63/124 (50%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
++ VDDS R +LKT+ FQV + G+ AL+ + +
Sbjct: 6 IIVVDDSEMIRNFHCYILKTAGFQVMSAVDGADALEKI--------------------YS 45
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+ +++++TD MP M GY +++++E +IP++I+S+E+ + R E GA+ +
Sbjct: 46 SEEPIDMVVTDINMPNMDGYTFIERLREDEQYEEIPIIIISTEDELKDMERGYEAGANIY 105
Query: 610 FLKP 621
+KP
Sbjct: 106 IVKP 109
>gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 58.9 bits (141), Expect = 5e-07
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 10/189 (5%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+L D+ + + LL S+QVT+V S + + L +
Sbjct: 34 ILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGAN---------------- 77
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+++I+ + +P G LLK I + LR IPV++MS+++ S + +CL GA ++
Sbjct: 78 ----IDIILAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADY 133
Query: 610 FLKPVRLSDMNKLKPHILKSR----------CNQEQHQQSDSHSGERRNPTISSSDSINN 759
+KP+R +++ L H+ + R N + + S N T SD ++
Sbjct: 134 LVKPLRTNELLNLWTHVWRRRRMLGLAEKNILNYDFDLVASDPSDANTNSTTLFSDDTDD 193
Query: 760 RKRKGAGTE 786
R + E
Sbjct: 194 RSCRSTNPE 202
>gb|AAF69721.1| F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 58.5 bits (140), Expect = 6e-07
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 9/193 (4%)
Frame = +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
+VL VD + +++++K ++QV+ KAL FL +
Sbjct: 35 NVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE--------------- 79
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
+N++I D+ MPG+ G LK I +S D+PVVIMS +N + + GA +
Sbjct: 80 -----INIVIWDFHMPGIDGLQALKSI---TSKLDLPVVIMSDDNQTESVMKATFYGACD 131
Query: 607 FFLKPVRLSDMNKLKPHILKSRC---------NQEQHQQSDSHSGERRNPTISSSDSINN 759
+ +KPV+ M + HI++ R Q +SD + + I + I N
Sbjct: 132 YVVKPVKEEVMANIWQHIVRKRLIFKPDVAPPVQSDPARSDRLDQVKADFKIVEDEPIIN 191
Query: 760 RKRKGAGTEEILP 798
TEEI P
Sbjct: 192 ETPLITWTEEIQP 204
>ref|ZP_00831816.1| COG0642: Signal transduction histidine kinase [Yersinia intermedia
ATCC 29909]
Length = 1243
Score = 58.5 bits (140), Expect = 6e-07
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSF-QVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 426
VL VDD +R+L+++ L QV + ++G++A Q L
Sbjct: 948 VLVVDDLPANRQLLQQQLAFIGIEQVMSAENGAEAWQIL--------------------- 986
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 606
Q + +++ITDY MP M GY+L I+ S +++D+ ++ +++ RC + G ++
Sbjct: 987 -QHYSFDIVITDYNMPLMNGYELAAHIRNSPAIKDMIIIGCTADARQESTERCSDAGMND 1045
Query: 607 FFLKPVRLSDMNK--LKPHILKSRCNQEQHQQSDSH-----SGERRNPTISSSDSINNRK 765
+KPV + + L+ + H +D + +R T S++D+ N+K
Sbjct: 1046 CMVKPVTIDTLRTVLLRQEVADINLEANYHHTNDDYRVNPLEMSQRENTHSAADNSENQK 1105
>gb|ABA04693.1| two component diguanylate cyclase [Nitrobacter winogradskyi Nb-255]
ref|YP_318045.1| two component diguanylate cyclase [Nitrobacter winogradskyi Nb-255]
Length = 457
Score = 58.5 bits (140), Expect = 6e-07
Identities = 38/125 (30%), Positives = 62/125 (49%)
Frame = +1
Query: 250 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
VL VDD + +L+E L F V T +G++AL+ + D
Sbjct: 5 VLVVDDVPANVRLLEARLSAEYFDVLTASNGAQALETCARAECD---------------- 48
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+ D MP M G+++ +++K + + IPVV++++ + PS R LE GAD+F
Sbjct: 49 ------IILLDVMMPDMDGFEVCRRLKANPATHFIPVVMITALDNPSDRVRGLEAGADDF 102
Query: 610 FLKPV 624
KPV
Sbjct: 103 LTKPV 107
>ref|ZP_00054894.1| COG3437: Response regulator containing a CheY-like receiver domain
and an HD-GYP domain [Magnetospirillum magnetotacticum
MS-1]
Length = 339
Score = 58.5 bits (140), Expect = 6e-07
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 253 LAVDDSLPDRKLIE-RLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
L +DD+ + L++ RL+K +V ++S AL + + D
Sbjct: 4 LLIDDNPTNLMLLKHRLIKIEGCEVVCMESAFDALAWCETNTPD---------------- 47
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
+I+TDY MPGM G D ++++++ +++D+PVV++++ ++ + L+ GA +F
Sbjct: 48 ------IILTDYMMPGMDGLDFIRQVRQRDAMQDVPVVVVTTSDVREIRQQALDLGAADF 101
Query: 610 FLKPV 624
KPV
Sbjct: 102 LTKPV 106
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,789,458,127
Number of Sequences: 3454138
Number of extensions: 57898773
Number of successful extensions: 201803
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 159815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197953
length of database: 1,185,965,366
effective HSP length: 133
effective length of database: 726,565,012
effective search space used: 228141413768
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)