BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440450.2.1
(1291 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_466911.1| putative replication protein A2 [Oryza sat... 272 2e-71
ref|XP_468522.1| replication protein A2 [Oryza sativa (japo... 190 1e-46
dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa (... 189 2e-46
emb|CAJ13715.1| putative replication factor A [Capsicum chi... 179 3e-43
gb|AAP58374.1| RPA 32kDa [Pisum sativum] 175 3e-42
ref|NP_565571.1| nucleic acid binding [Arabidopsis thaliana... 160 1e-37
ref|NP_566188.1| nucleic acid binding [Arabidopsis thaliana... 135 5e-30
gb|AAF26967.1| putative replication factor A [Arabidopsis t... 134 6e-30
emb|CAG89788.1| unnamed protein product [Debaryomyces hanse... 103 2e-20
dbj|BAD53865.1| putative replication protein A2 [Oryza sati... 100 2e-19
gb|EAL21502.1| hypothetical protein CNBD1960 [Cryptococcus ... 99 4e-19
dbj|BAE59043.1| unnamed protein product [Aspergillus oryzae] 96 3e-18
gb|AAH21257.1| Replication protein A2, 32kDa [Homo sapiens]... 95 6e-18
emb|CAI21778.1| replication protein A2, 32kDa [Homo sapiens] 95 6e-18
emb|CAI21775.1| replication protein A2, 32kDa [Homo sapiens] 95 6e-18
emb|CAH90667.1| hypothetical protein [Pongo pygmaeus] >gi|6... 94 9e-18
ref|XP_610985.2| PREDICTED: similar to Replication protein ... 94 2e-17
emb|CAA22775.1| ssb2 [Schizosaccharomyces pombe] >gi|630544... 93 2e-17
emb|CAA21823.1| ssb2 [Schizosaccharomyces pombe] 93 2e-17
ref|XP_658186.1| hypothetical protein AN0582.2 [Aspergillus... 92 5e-17
ref|XP_544465.2| PREDICTED: similar to Replication protein ... 92 6e-17
ref|NP_035414.2| replication protein A2 [Mus musculus] >gi|... 91 8e-17
sp|Q62193|RFA2_MOUSE Replication protein A 32 kDa subunit (... 91 8e-17
dbj|BAE41408.1| unnamed protein product [Mus musculus] >gi|... 91 1e-16
ref|XP_873600.1| PREDICTED: similar to Replication protein ... 91 1e-16
emb|CAD37148.1| possible replication factor-a protein [Aspe... 90 2e-16
gb|AAI12730.1| Unknown (protein for MGC:137236) [Bos taurus] 90 2e-16
ref|XP_584610.2| PREDICTED: similar to Replication protein ... 90 2e-16
ref|XP_750997.1| hypothetical protein Afu6g11130 [Aspergill... 90 2e-16
ref|NP_067593.1| replication protein A2 [Rattus norvegicus]... 88 7e-16
emb|CAA67116.1| p32-subunit of replication protein A [Rattu... 88 7e-16
gb|AAW43367.1| conserved hypothetical protein [Cryptococcus... 87 1e-15
ref|XP_714857.1| hypothetical protein CaO19.2267 [Candida a... 86 3e-15
ref|XP_758726.1| hypothetical protein UM02579.1 [Ustilago m... 86 3e-15
gb|AAS51744.1| ADL176Wp [Ashbya gossypii ATCC 10895] >gi|45... 86 4e-15
ref|NP_001026063.1| replication protein A2, 32kDa [Gallus g... 85 7e-15
ref|XP_389900.1| hypothetical protein FG09724.1 [Gibberella... 84 1e-14
ref|XP_454281.1| unnamed protein product [Kluyveromyces lac... 83 3e-14
gb|AAH95005.1| Rpa2 protein [Danio rerio] 80 2e-13
ref|XP_513251.1| PREDICTED: hypothetical protein XP_513251 ... 80 2e-13
gb|AAH72101.1| MGC79017 protein [Xenopus laevis] 79 3e-13
emb|CAG62496.1| unnamed protein product [Candida glabrata C... 79 3e-13
gb|AAH76661.1| Replication protein A2, 32kDa [Xenopus tropi... 79 5e-13
ref|XP_961967.1| hypothetical protein [Neurospora crassa N1... 78 7e-13
gb|EAQ88020.1| hypothetical protein CHGG_04639 [Chaetomium ... 78 9e-13
emb|CAA96241.1| RFA2 [Saccharomyces cerevisiae] >gi|4314|em... 74 2e-11
ref|NP_585792.1| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBU... 73 3e-11
gb|AAW25942.1| SJCHGC02904 protein [Schistosoma japonicum] 72 4e-11
pdb|1QUQ|C Chain C, Complex Of Replication Protein A Subuni... 72 5e-11
emb|CAI21776.1| replication protein A2, 32kDa [Homo sapiens] 72 5e-11
pdb|1L1O|E Chain E, Structure Of The Human Replication Prot... 70 1e-10
gb|AAT08661.1| single-stranded DNA-binding replication prot... 70 2e-10
ref|XP_504973.1| hypothetical protein [Yarrowia lipolytica]... 70 2e-10
gb|AAG12435.1| replication protein A [Danio rerio] >gi|1885... 69 4e-10
dbj|BAD69790.1| Replication protein A middle subunit [Bomby... 65 8e-09
gb|EAL33908.1| GA21663-PA [Drosophila pseudoobscura] 62 7e-08
gb|AAI04014.1| Replication protein A4, 34kDa [Homo sapiens]... 60 2e-07
ref|NP_610077.1| CG9273-PA [Drosophila melanogaster] >gi|17... 58 1e-06
gb|AAL90389.1| RH07841p [Drosophila melanogaster] 57 2e-06
ref|XP_529067.1| PREDICTED: similar to diaphanous 2 isoform... 53 3e-05
gb|AAX79127.1| replication Factor A 28 kDa subunit, putativ... 50 2e-04
ref|XP_807521.1| replication Factor A 28 kDa subunit [Trypa... 50 3e-04
gb|EAA43853.2| ENSANGP00000023457 [Anopheles gambiae str. P... 50 3e-04
gb|EAA12428.2| ENSANGP00000018307 [Anopheles gambiae str. P... 50 3e-04
ref|XP_508712.1| PREDICTED: similar to contactin 5 isoform ... 47 0.001
emb|CAJ03255.1| replication Factor A 28 kDa subunit, putati... 47 0.002
emb|CAI21774.1| replication protein A2, 32kDa [Homo sapiens] 45 0.005
emb|CAI74950.1| hypothetical protein [Theileria annulata] >... 44 0.019
ref|XP_764591.1| hypothetical protein TP02_0022 [Theileria ... 43 0.025
emb|CAA80683.1| 28 kilodalton subunit of replication protei... 40 0.16
ref|XP_728005.1| hypothetical protein PY07197 [Plasmodium y... 39 0.61
gb|AAZ80925.1| 32kDa replication protein A2 [Macaca mulatta] 38 0.80
pdb|1Z1D|A Chain A, Structural Model For The Interaction Be... 38 0.80
pdb|1DPU|A Chain A, Solution Structure Of The C-Terminal Do... 38 0.80
ref|XP_743944.1| hypothetical protein [Plasmodium chabaudi ... 37 1.8
gb|AAT29571.1| prophage LambdaBa04, tape measure protein, p... 35 8.8
ref|ZP_00390860.1| COG5280: Phage-related minor tail protei... 35 8.8
>ref|XP_466911.1| putative replication protein A2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD25304.1| putative replication protein A2 [Oryza sativa (japonica
cultivar-group)]
Length = 298
Score = 272 bits (696), Expect = 2e-71
Identities = 145/272 (53%), Positives = 185/272 (68%), Gaps = 30/272 (11%)
Frame = -2
Query: 1098 PSQSTVVPENS-----GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
PSQ+T E + G K R+AQ LLPLTVKQ MDA+QT+ D+SNFA+NG+EVST+RL
Sbjct: 32 PSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAVNGMEVSTVRL 91
Query: 933 VGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQG 754
VGRML K++RVTDV FTLDDGTG++ VNRWEN+++D KEMAD N +YVIV GGLKGFQG
Sbjct: 92 VGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDYVIVNGGLKGFQG 151
Query: 753 KRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLK-QIYSSAATYGGVAHAPSQPNPVD 577
KR VVAY+VRR+TNFN++T HFLHC+ VH+EL K Q+ ++ AT P+Q P D
Sbjct: 152 KRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTAT-----GTPNQTMPRD 206
Query: 576 ------------------------GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLP 469
G + +LVL+VFHDP+VM+ +HG+ + V RL LP
Sbjct: 207 SMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVDYVSRRLNLP 266
Query: 468 DDVVSAAIQGHVDVGNIYNTIDDFHYKSVRNG 373
++ V I VD+G++Y TIDD HYKS NG
Sbjct: 267 EETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 298
>ref|XP_468522.1| replication protein A2 [Oryza sativa (japonica cultivar-group)]
emb|CAC03572.1| replication protein A2 [Oryza sativa]
dbj|BAD22936.1| replication protein A2 [Oryza sativa (japonica cultivar-group)]
Length = 279
Score = 190 bits (483), Expect = 1e-46
Identities = 103/263 (39%), Positives = 157/263 (59%), Gaps = 23/263 (8%)
Frame = -2
Query: 1095 SQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT--SGDR-SNFAINGVEVSTIRLVGR 925
S +++ SK R A + +PLTVKQ +A Q+ +G++ + F ++GVE + +RLVG
Sbjct: 17 SSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANVRLVGL 76
Query: 924 MLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRH 745
+ GK ER TDV FT+DDGTG++D RW N+ +D+ E A N YV VIG LKG Q ++
Sbjct: 77 VSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQERKR 136
Query: 744 VVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQ-------PN 586
A+A+R VT++NE+T HF+ C+++H+E QI S A TY + + S P
Sbjct: 137 ATAFAIRPVTDYNEVTLHFIQCVRMHLE-NTKSQIGSPAKTYSAMGSSSSNGFSEMTTPT 195
Query: 585 PVDGN-------------YISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAI 445
V N ++ VL+VF +P+ ++ EHG+HI +++ R +LP+ + AI
Sbjct: 196 SVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPEAKIKVAI 255
Query: 444 QGHVDVGNIYNTIDDFHYKSVRN 376
D+G+IY+TID+ HYKS N
Sbjct: 256 DYLADIGHIYSTIDESHYKSAFN 278
>dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa (japonica cultivar-group)]
Length = 279
Score = 189 bits (481), Expect = 2e-46
Identities = 103/263 (39%), Positives = 157/263 (59%), Gaps = 23/263 (8%)
Frame = -2
Query: 1095 SQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT--SGDR-SNFAINGVEVSTIRLVGR 925
S +++ SK R A + +PLTVKQ +A Q+ +G++ + F ++GVE + +RLVG
Sbjct: 17 SSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANVRLVGL 76
Query: 924 MLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRH 745
+ GK ER TDV F +DDGTG++D RW N+ +D+ E A N YV VIG LKG Q ++
Sbjct: 77 VSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQERKR 136
Query: 744 VVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQ-------PN 586
A+A+R VT++NE+T HF+ C+++H+E QI S A TY + + S P
Sbjct: 137 ATAFAIRPVTDYNEVTLHFIQCVRMHLE-NTKSQIGSPAKTYSAMGSSSSNGFSEMTTPT 195
Query: 585 PVDGN-------------YISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAI 445
V N ++ VL+VF +P+ ++ EHG+HI +++ RL+LP+ + AI
Sbjct: 196 SVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRLRLPEAKIKVAI 255
Query: 444 QGHVDVGNIYNTIDDFHYKSVRN 376
D+G+IY+TID+ HYKS N
Sbjct: 256 DYLADIGHIYSTIDESHYKSAFN 278
>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 179 bits (453), Expect = 3e-43
Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 18/259 (6%)
Frame = -2
Query: 1098 PSQSTVVPENSGLS--KGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGR 925
PSQ+T + S K R +QTL+PLTVKQ +A Q+S D++NF I+GV+V+ ++LVG
Sbjct: 40 PSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTNFLIDGVDVNNVKLVGI 99
Query: 924 MLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRH 745
+ K E +T V F +DDGTG++D RW NEA D KEM N YV V G LKGFQGK+
Sbjct: 100 LFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGIYVRVHGHLKGFQGKKQ 159
Query: 744 VVAYAVRRVTNFNEITCHFLHCIQVHMELPGLK----------QIYSSAATYGGVAHAPS 595
++AY+VR V ++NEI HF I VH L+ Q+ SS+ + S
Sbjct: 160 LMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQVPSSSFNTPLKGYQAS 219
Query: 594 QPNPVDG------NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHV 433
N G + +VL PS + E G+H ++ +L++P + + A++
Sbjct: 220 ASNQFPGFNMDGIGGVHKMVLDYLQQPSCLALEKGVHRNELAQQLRVPSEKIMGAMEALE 279
Query: 432 DVGNIYNTIDDFHYKSVRN 376
G +Y+TIDDFHYKS N
Sbjct: 280 SEGLVYSTIDDFHYKSTGN 298
>gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 175 bits (444), Expect = 3e-42
Identities = 101/243 (41%), Positives = 142/243 (58%), Gaps = 19/243 (7%)
Frame = -2
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTL 880
+K R +Q L+P+TVKQ +A+Q+ ++SNFAINGV+++ + LVG + K ER TDV F L
Sbjct: 31 TKSRDSQGLVPVTVKQISEASQSGDEKSNFAINGVDLTNVTLVGMVYEKTERNTDVNFVL 90
Query: 879 DDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEI 700
DDGTG+I RW NE D+KEM + +N+ YV V G LK FQG + + A++VR VTNF+EI
Sbjct: 91 DDGTGRIKCRRWVNETFDSKEMEEVSNDMYVRVYGNLKSFQGVKQLGAFSVRPVTNFDEI 150
Query: 699 TCHFLHCIQVHM----ELPGLKQIYS----------SAATYGGVAHAPSQPN----PVDG 574
HF+ CI H+ +L G Y +A G + APS P DG
Sbjct: 151 PFHFIDCIHSHLLAKVKLEGTPSTYPPTNSSINTPVKSALNG--SQAPSNPGYTQYSTDG 208
Query: 573 -NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
LV+ S M E G+H++++ LKLP D + +++ D G +Y+TIDD
Sbjct: 209 LEDCDKLVIDYLQQHSSMLDERGIHVEELARELKLPLDRIRLSVKALEDDGLVYSTIDDS 268
Query: 396 HYK 388
HYK
Sbjct: 269 HYK 271
>ref|NP_565571.1| nucleic acid binding [Arabidopsis thaliana]
gb|AAD18120.2| putative replication protein A1 [Arabidopsis thaliana]
gb|AAM66059.1| putative replication protein A1 [Arabidopsis thaliana]
gb|AAO63853.1| putative replication protein A1 [Arabidopsis thaliana]
dbj|BAC42198.1| putative replication protein A1 [Arabidopsis thaliana]
gb|ABB86293.1| DNA replication protein A2 subunit [Arabidopsis thaliana]
Length = 279
Score = 160 bits (404), Expect = 1e-37
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 18/257 (7%)
Frame = -2
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQ+ +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG +
Sbjct: 23 PSQA--YESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVC 80
Query: 918 GKVE-RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHV 742
K E +VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK +
Sbjct: 81 DKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQL 140
Query: 741 VAYAVRRVTNFNEITCHFLHCIQVH--------MELPGLKQIYSSAATYGGVAHAPSQPN 586
+ ++VR + +FNE+T H++ CI + ++ + Q ++ G + + N
Sbjct: 141 LVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQSVNTTFQGGSNTNQATLLN 200
Query: 585 PV------DGNYISNL---VLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHV 433
PV DGN NL +L P+ ++ G+HI ++ +LK+P + + +Q
Sbjct: 201 PVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLE 260
Query: 432 DVGNIYNTIDDFHYKSV 382
G IY+TID++H+K V
Sbjct: 261 GDGLIYSTIDEYHFKHV 277
>ref|NP_566188.1| nucleic acid binding [Arabidopsis thaliana]
gb|AAM61372.1| putative replication factor A [Arabidopsis thaliana]
dbj|BAC42439.1| putative replication factor A [Arabidopsis thaliana]
Length = 278
Score = 135 bits (339), Expect = 5e-30
Identities = 94/262 (35%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Frame = -2
Query: 1098 PSQSTV-VPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRM 922
PSQ+T E+S K R +TLLPLT+KQ + +A T+G+ SNF+I+GV++ T+ +VGR+
Sbjct: 19 PSQATTQAHESSSSLKNRDVRTLLPLTLKQ-LSSASTTGE-SNFSIDGVDIKTVVIVGRI 76
Query: 921 LGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHV 742
R+T V F +DDGTG +D RW + + +EM YV + G LK FQGKR V
Sbjct: 77 SRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSV 136
Query: 741 VAYAVRRVTNFNEITCHFLHCIQVHM--------------ELPGLKQIYSSAAT------ 622
++VR VT+FNEI HF C+ VHM P + YS+ T
Sbjct: 137 NVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQ 196
Query: 621 YGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQ 442
G P+Q N + + VL+ + P + E G+H + L++P V A++
Sbjct: 197 TGPSNQFPNQFND-SMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALE 255
Query: 441 GHVDVGNIYNTIDDFHYKSVRN 376
+ G IY+T+D+ +KS N
Sbjct: 256 QLSNDGCIYSTLDETCFKSTAN 277
>gb|AAF26967.1| putative replication factor A [Arabidopsis thaliana]
Length = 282
Score = 134 bits (338), Expect = 6e-30
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 25/266 (9%)
Frame = -2
Query: 1098 PSQSTV-VPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRM 922
PSQ+T E+S K R +TLLPLT+KQ + +A T+G+ SNF+I+GV++ T+ +VGR+
Sbjct: 19 PSQATTQAHESSSSLKNRDVRTLLPLTLKQ-LSSASTTGE-SNFSIDGVDIKTVVIVGRI 76
Query: 921 LGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHV 742
R+T V F +DDGTG +D RW + + +EM YV + G LK FQGKR V
Sbjct: 77 SRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSV 136
Query: 741 VAYAVRRVTNFNEITCHFLHCIQVHM------------------------ELPGLKQIYS 634
++VR VT+FNEI HF C+ VHM +P + Y
Sbjct: 137 NVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQ 196
Query: 633 SAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVS 454
+ + + P+Q N + + VL+ + P + E G+H + L++P V
Sbjct: 197 TGPSNQNLFQFPNQFND-SMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVK 255
Query: 453 AAIQGHVDVGNIYNTIDDFHYKSVRN 376
A++ + G IY+T+D+ +KS N
Sbjct: 256 EALEQLSNDGCIYSTLDETCFKSTAN 281
>emb|CAG89788.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_461381.1| hypothetical protein DEHA0F25322g [Debaryomyces hansenii CBS767]
Length = 260
Score = 103 bits (257), Expect = 2e-20
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 9/240 (3%)
Frame = -2
Query: 1074 ENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTD 895
EN+G K + +L P+T+KQ +A Q D F ++ V ++ + VG + + +
Sbjct: 28 ENNGSQKQQLRSSLTPVTIKQITEATQPIPD-GEFQVHNVNLNLVSFVGVVRNVQDITSA 86
Query: 894 VVFTLDDGTGKIDVNRW--ENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRR 721
++ T++DGTG I+V +W ++ A D E Y+ V G LK F GK+++ +R
Sbjct: 87 ILITIEDGTGSIEVRKWIDDSNAMDENEQEKYEMNKYIYVTGALKEFNGKKNLQHATMRP 146
Query: 720 VTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAP------SQPNPVD-GNYIS 562
+T+ NEI H L I H++ GL SA G + P+ +D G I
Sbjct: 147 ITDHNEILYHHLSAISHHLKAQGL-----SARANGEQNQSQDNGLFVKDPHGMDVGTSIQ 201
Query: 561 NLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSV 382
+ +L+V D + QE G+ + + +L + DD+V +D G IY+ DD Y +V
Sbjct: 202 DKILTVIRDNTSSMQE-GVPVPFISQKLNVTDDLVLEQCSELIDNGKIYSGYDDSAYLAV 260
>dbj|BAD53865.1| putative replication protein A2 [Oryza sativa (japonica
cultivar-group)]
Length = 438
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/114 (43%), Positives = 72/114 (63%)
Frame = -2
Query: 1002 AAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDA 823
AA GD F+I+GVE + +R++GR++ V R TDV FTLDD TGKI + RW + SD
Sbjct: 67 AADGGGDPV-FSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDT 125
Query: 822 KEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHME 661
++ + YV V L GFQ K+ +A ++R + NFNE+ HF+ C+ VH+E
Sbjct: 126 RDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLE 179
>gb|EAL21502.1| hypothetical protein CNBD1960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 266
Score = 99.0 bits (245), Expect = 4e-19
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
QT+ P+TVKQ +DA Q D ++F I+GV+V+ + L+G + T++ + + DGTG
Sbjct: 40 QTIRPVTVKQILDAQQVHPD-ADFTIDGVDVAQVLLIGSVRNMSTTATNISYEIGDGTGY 98
Query: 861 IDVNRWENEASD-AKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFL 685
ID W + A D + + ++YV ++G +K F GKRHV A +R +T+ NE+ H L
Sbjct: 99 IDARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLL 158
Query: 684 HCIQVHMEL-----------PGLKQIYSSAATYGGV-AHAPSQPNPVDGNYISNLVLSVF 541
+ V + L G Y++ AT G A S P + +L V
Sbjct: 159 KALYVSLILRGGTPGNAPKAAGTHDDYNAGATTGATDQSAWSHLEP-----LQRRILEVL 213
Query: 540 HDPSVMDQEHGLHIKDVIDRLKLPDD-VVSAAIQGHVDVGNIYNTIDDFHYK 388
+ G+H+ +I L D+ + A+ D G +Y+T+D+ HY+
Sbjct: 214 SSEG-QGNDDGVHVTHIIKFLNGADENDFTVALDWLTDNGYVYSTLDESHYQ 264
>dbj|BAE59043.1| unnamed protein product [Aspergillus oryzae]
Length = 276
Score = 95.9 bits (237), Expect = 3e-18
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 26/251 (10%)
Frame = -2
Query: 1074 ENSGLSKGRSAQ----TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVE 907
E + + G+SA TL P+T+KQ +DA Q + +++ I+G +V +I VG++
Sbjct: 21 ETNSPAAGKSADGNNTTLRPITIKQALDATQPYPE-ADYQIDGADVGSICFVGQVRNIST 79
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEAS-------DAKEMADAN---NENYVIVIGGLKGFQ 757
+ T++ + +DDGTG+I+V +W + A+ D+K A N N Y + G LK F
Sbjct: 80 QSTNITYRIDDGTGEIEVKQWVDSATADTMDTDDSKAGAGKNQVVNNGYAKIFGKLKTFG 139
Query: 756 GKRHVVAYAVRRVTNFNEITCHFLHCIQVHM-----ELPGLKQIYSSA-------ATYGG 613
KR V ++ VR +T+ NE+ CH L + VH+ + G ++A AT GG
Sbjct: 140 NKRFVGSHCVRPLTDINELHCHMLEAVAVHLFFTRGPVGGSGGAGAAAGGAGGADATMGG 199
Query: 612 VAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHV 433
V + N + ++ V ++ + GLH + + +L LP V+ A +
Sbjct: 200 VDDYSAGRNLPAMSPVARRVYNLL--KTEPQSNEGLHAQLIAAKLSLPMPDVARAGDELL 257
Query: 432 DVGNIYNTIDD 400
G I++T+D+
Sbjct: 258 TAGVIFSTVDE 268
>gb|AAH21257.1| Replication protein A2, 32kDa [Homo sapiens]
gb|AAH12157.1| Replication protein A2, 32kDa [Homo sapiens]
gb|AAH01630.1| Replication protein A2, 32kDa [Homo sapiens]
emb|CAI21777.1| replication protein A2, 32kDa [Homo sapiens]
emb|CAG29344.1| RPA2 [Homo sapiens]
gb|AAX84514.1| replication protein A2, 32kDa [Homo sapiens]
ref|NP_002937.1| replication protein A2, 32kDa [Homo sapiens]
sp|P15927|RFA2_HUMAN Replication protein A 32 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 2) (P34)
gb|AAA36560.1| replication protein A
Length = 270
Score = 95.1 bits (235), Expect = 6e-18
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 159
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L I HM L PG+ S A +GG + P+ V N + NL
Sbjct: 160 LEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLTVAQNQVLNL 215
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++LK + + A+ + G+IY+T+DD H+KS
Sbjct: 216 I-------KACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKS 266
>emb|CAI21778.1| replication protein A2, 32kDa [Homo sapiens]
Length = 278
Score = 95.1 bits (235), Expect = 6e-18
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 51 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 107
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 108 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 167
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L I HM L PG+ S A +GG + P+ V N + NL
Sbjct: 168 LEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLTVAQNQVLNL 223
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++LK + + A+ + G+IY+T+DD H+KS
Sbjct: 224 I-------KACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKS 274
>emb|CAI21775.1| replication protein A2, 32kDa [Homo sapiens]
Length = 358
Score = 95.1 bits (235), Expect = 6e-18
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 131 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 187
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 188 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 247
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L I HM L PG+ S A +GG + P+ V N + NL
Sbjct: 248 LEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLTVAQNQVLNL 303
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++LK + + A+ + G+IY+T+DD H+KS
Sbjct: 304 I-------KACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKS 354
>emb|CAH90667.1| hypothetical protein [Pongo pygmaeus]
sp|Q5RC43|RFA2_PONPY Replication protein A 32 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 2)
Length = 270
Score = 94.4 bits (233), Expect = 9e-18
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 APMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 159
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L I HM L PG+ S A +GG + P+ V N + NL
Sbjct: 160 LEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLTVAQNQVLNL 215
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++LK + V A+ + G+IY+T+DD H+KS
Sbjct: 216 I-------KACPRPEGLNFQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDDDHFKS 266
>ref|XP_610985.2| PREDICTED: similar to Replication protein A 32 kDa subunit (RP-A)
(RF-A) (Replication factor-A protein 2) (P34) [Bos
taurus]
Length = 270
Score = 93.6 bits (231), Expect = 2e-17
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLVD---EIFRIGNVEISRVTIVGIIRNAEKAATNIVYKIDDMTT 99
Query: 864 -KIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 VPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 159
Query: 687 LHCIQVHMEL------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSV 544
L + HM L P K A + G P+ V N + NL+
Sbjct: 160 LEVVNAHMMLSKSNSQPSAGRAPISKPGMGEAGNFSGNNFIPANGLTVAQNQVLNLI--- 216
Query: 543 FHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ GL+ +D+ ++L+ +P + S A+ + G+IY+T+DD H+KS
Sbjct: 217 ----KACPRPEGLNFQDLKNQLQHMPRNFRSLAVDFLSNEGHIYSTVDDDHFKS 266
>emb|CAA22775.1| ssb2 [Schizosaccharomyces pombe]
ref|NP_588227.2| replication factor A complex protein 2 [Schizosaccharomyces pombe
972h-]
gb|AAC49438.1| single-stranded DNA binding protein p30 subunit
pir||T41124 single-stranded DNA binding protein 30K chain [validated] - fission
yeast (Schizosaccharomyces pombe)
sp|Q92373|RFA2_SCHPO Replication factor-A protein 2 (Single-stranded DNA-binding protein
P30 subunit)
Length = 279
Score = 93.2 bits (230), Expect = 2e-17
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Frame = -2
Query: 1035 LLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKID 856
L P+T+KQ ++A+Q D + F I+GVEV + VG + + T+ + ++DGTG I+
Sbjct: 50 LRPVTIKQILNASQVHAD-AEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIE 108
Query: 855 VNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCI 676
V WE+ +++ + YV V G +K F GK ++ + +R + + NE+ HFL I
Sbjct: 109 VRHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAI 164
Query: 675 QVHMELPGLKQIYSSAATYG-GVAHAPSQPNPVDGNYISN----------------LVLS 547
VH+ + A G G ++A N + N +N V+
Sbjct: 165 AVHLHFTQKANAVNGANAPGYGTSNALGY-NNISSNGAANSLEQKLAEYSLTPAQMTVMQ 223
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSV 382
H S + G+H++ + + P ++A G IY TID+ H+KSV
Sbjct: 224 AIH--SAPETNEGVHVRQLAQSVG-PGIDLTAVTDFLQQEGIIYTTIDENHFKSV 275
>emb|CAA21823.1| ssb2 [Schizosaccharomyces pombe]
Length = 247
Score = 93.2 bits (230), Expect = 2e-17
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Frame = -2
Query: 1035 LLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKID 856
L P+T+KQ ++A+Q D + F I+GVEV + VG + + T+ + ++DGTG I+
Sbjct: 18 LRPVTIKQILNASQVHAD-AEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIE 76
Query: 855 VNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCI 676
V WE+ +++ + YV V G +K F GK ++ + +R + + NE+ HFL I
Sbjct: 77 VRHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAI 132
Query: 675 QVHMELPGLKQIYSSAATYG-GVAHAPSQPNPVDGNYISN----------------LVLS 547
VH+ + A G G ++A N + N +N V+
Sbjct: 133 AVHLHFTQKANAVNGANAPGYGTSNALGY-NNISSNGAANSLEQKLAEYSLTPAQMTVMQ 191
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSV 382
H S + G+H++ + + P ++A G IY TID+ H+KSV
Sbjct: 192 AIH--SAPETNEGVHVRQLAQSVG-PGIDLTAVTDFLQQEGIIYTTIDENHFKSV 243
>ref|XP_658186.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
gb|EAA66681.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
Length = 278
Score = 92.0 bits (227), Expect = 5e-17
Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 24/237 (10%)
Frame = -2
Query: 1038 TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKI 859
TL P+T+KQ +DA Q + +NF I+G +VS+I +G++ + T+V + LDDGTG++
Sbjct: 38 TLRPVTIKQILDATQPYPE-ANFTIDGQDVSSIVFIGQVRNISTQATNVTYKLDDGTGEV 96
Query: 858 DVNRWEN--EASD-----AKEMADANN---ENYVIVIGGLKGFQGKRHVV-AYAVRRVTN 712
+ +W N EA D KE D N Y V G LK G R VV + VR +T+
Sbjct: 97 EAKQWINPSEAMDTTEDFGKEGKDLNGVEINGYAKVFGKLKSLFGDRKVVNTHCVRPLTD 156
Query: 711 FNEITCHFLHCIQVHM----ELPG-----LKQIYSSAATYGGVAHAPSQPNPVDGNYISN 559
NE+ HFL VH+ PG +I A GG+ A G + +N
Sbjct: 157 INELHVHFLEAAAVHLFHTRGAPGPAAGATGKIDGGDAAMGGLDGAGVGGG---GGFPAN 213
Query: 558 LVLSVFHDPSVMDQE----HGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 400
+ + +++ E GLH + + +L LP V A ++ G +++T+DD
Sbjct: 214 MSATARRVYNLLRTEPQNNEGLHAQFIAAKLGLPPQDVVRAGDELINAGMVFSTVDD 270
>ref|XP_544465.2| PREDICTED: similar to Replication protein A 32 kDa subunit (RP-A)
(RF-A) (Replication factor-A protein 2) (P34) [Canis
familiaris]
Length = 368
Score = 91.7 bits (226), Expect = 6e-17
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 141 AQHIVPCTISQLLSATLVD---EMFKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 197
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 198 APMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHI 257
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L + HM L PG+ +GG++ P+ V N + NL
Sbjct: 258 LEVVNAHMILSKSNSQPPAGRAPISNPGM----GETGNFGGISSIPANGLTVAQNQVLNL 313
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++L+ + + A+ + G+IY+T+DD H+KS
Sbjct: 314 I-------KACPRPEGLNFQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTVDDDHFKS 364
>ref|NP_035414.2| replication protein A2 [Mus musculus]
gb|AAH04578.1| Replication protein A2 [Mus musculus]
Length = 270
Score = 91.3 bits (225), Expect = 8e-17
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A T F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLTD---EVFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E A E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 PPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 159
Query: 687 LHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDGN---------YISNLVLSVFHD 535
L + HM L +SA S+P GN + N VL++
Sbjct: 160 LEVVNSHMML-SKSNSQASAGRPSMSNPGMSEPGNFSGNNFMPANGLTVVQNQVLNLI-- 216
Query: 534 PSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ GL+ +D+ +L+ +P + A+ + G+IY+T+DD H+KS
Sbjct: 217 -KACPRPEGLNFQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFKS 266
>sp|Q62193|RFA2_MOUSE Replication protein A 32 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 2)
dbj|BAA00693.1| 30-kDa subunit of replication protein A [Mus musculus]
Length = 270
Score = 91.3 bits (225), Expect = 8e-17
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A T F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLTD---EVFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E A E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 PPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 159
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L + HM L PG+ + ++ + G P+ V N + NL
Sbjct: 160 LEVVNSHMMLSKPNSQASAGRPSMSNPGMSESFN----FSGNNFMPANRLTVVQNQVLNL 215
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ +L+ +P + A+ + G+IY+T+DD H+KS
Sbjct: 216 I-------KACPRPEGLNFQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFKS 266
>dbj|BAE41408.1| unnamed protein product [Mus musculus]
dbj|BAE40529.1| unnamed protein product [Mus musculus]
Length = 270
Score = 90.9 bits (224), Expect = 1e-16
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A T F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLTD---EVFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E A E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 PPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 159
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L + HM L PG+ S + G P+ V N + NL
Sbjct: 160 LEVVNSHMMLSKPNSQASAGRPSMSNPGM----SEPGNFSGNNFMPANGLTVVQNQVLNL 215
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ +L+ +P + A+ + G+IY+T+DD H+KS
Sbjct: 216 I-------KACPRPEGLNFQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFKS 266
>ref|XP_873600.1| PREDICTED: similar to Replication protein A 32 kDa subunit (RP-A)
(RF-A) (Replication factor-A protein 2) (P34) [Bos
taurus]
Length = 270
Score = 90.9 bits (224), Expect = 1e-16
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 14/234 (5%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLVD---EIFRIGNVEISRVTIVGIIRNAEKAATNIVYKIDDMTT 99
Query: 864 -KIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 VPMDVRQWVDTDDASSENTVVPPEAYVKVAGHLRSFQNKKSLVAFKIMPLEHMNEFTTHI 159
Query: 687 LHCIQVHMEL------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSV 544
L + HM L P K A +GG P+ V N + NL+
Sbjct: 160 LEVVNAHMMLSKSNSQPSAGRAPISKPGMGEAGNFGGNNFIPANGLTVAQNQVLNLI--- 216
Query: 543 FHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ GL+ +D+ ++L+ + + A+ + G+IY+T+DD H+KS
Sbjct: 217 ----KACPRPEGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFKS 266
>emb|CAD37148.1| possible replication factor-a protein [Aspergillus fumigatus]
Length = 274
Score = 90.1 bits (222), Expect = 2e-16
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Frame = -2
Query: 1038 TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKI 859
TL P+TVKQ +DA+Q + + F I+G + +++ +G++ + T+V + +DDGTG+I
Sbjct: 43 TLRPITVKQALDASQPYPEAA-FQIDGADAASVCFIGQVRNISSQSTNVTYKIDDGTGEI 101
Query: 858 DVNRW-ENEASDAKEMADAN---NENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCH 691
+V +W + + +D E D +N V G +K F KR+V A+ VR TN NE+ CH
Sbjct: 102 EVKQWIDTQTADTMETDDGKAGTGKNQVF--GKIKSFGNKRYVGAHCVRPTTNLNEVHCH 159
Query: 690 FLHCIQVHMEL---PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL------VLSVFH 538
L +H+ P A+ G A A G SNL V++
Sbjct: 160 LLEAAAIHLFFTRGPPGGGAAGGASGAGANADAAMGGANDYGTGNSNLPAMSPAARRVYN 219
Query: 537 DPSVMDQEH-GLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 400
Q + GLH + + +L LP V+ A + + G I++T+D+
Sbjct: 220 LLKTEPQSNEGLHAQLIAAKLNLPMPDVARAGEELLTAGVIFSTVDE 266
>gb|AAI12730.1| Unknown (protein for MGC:137236) [Bos taurus]
Length = 270
Score = 90.1 bits (222), Expect = 2e-16
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 APMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTTHI 159
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L + HM L PG+ A +GG P+ V N + NL
Sbjct: 160 LEVVNAHMMLSKSNSQPSAGRAPISNPGM----GEAGNFGGNNFIPANGLTVAQNQVLNL 215
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++L+ + + A+ + G+IY+T+DD H+KS
Sbjct: 216 I-------KACPRPEGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFKS 266
>ref|XP_584610.2| PREDICTED: similar to Replication protein A 32 kDa subunit (RP-A)
(RF-A) (Replication factor-A protein 2) (P34) [Bos
taurus]
Length = 362
Score = 90.1 bits (222), Expect = 2e-16
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 18/238 (7%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 135 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTA 191
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 192 APMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTTHI 251
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L + HM L PG+ A +GG P+ V N + NL
Sbjct: 252 LEVVNAHMMLSKSNSQPSAGRAPISNPGM----GEAGNFGGNNFIPANGLTVAQNQVLNL 307
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ + GL+ +D+ ++L+ + + A+ + G+IY+T+DD H+KS
Sbjct: 308 I-------KACPRPEGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFKS 358
>ref|XP_750997.1| hypothetical protein Afu6g11130 [Aspergillus fumigatus Af293]
gb|EAL88959.1| possible replication factor-a protein [Aspergillus fumigatus Af293]
Length = 289
Score = 89.7 bits (221), Expect = 2e-16
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Frame = -2
Query: 1038 TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKI 859
TL P+TVKQ +DA+Q + + F I+G + +++ +G++ + T+V + +DDGTG+I
Sbjct: 50 TLRPITVKQALDASQPYPEAA-FQIDGADAASVCFIGQVRNISSQSTNVTYKIDDGTGEI 108
Query: 858 DVNRW-ENEASDAKEMADANN---------ENYVIVIGGLKGFQGKRHVVAYAVRRVTNF 709
+V +W + + +D E D + V G +K F KR+V A+ VR TN
Sbjct: 109 EVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVFGKIKSFGNKRYVGAHCVRPTTNL 168
Query: 708 NEITCHFLHCIQVHMEL---PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL------ 556
NE+ CH L +H+ P A+ G A A G SNL
Sbjct: 169 NEVHCHLLEAAAIHLFFTRGPPGGGAAGGASGAGANADAAMGGANDYGTGNSNLPAMSPA 228
Query: 555 VLSVFHDPSVMDQEH-GLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 400
V++ Q + GLH + + +L LP V+ A + + G I++T+D+
Sbjct: 229 ARRVYNLLKTEPQSNEGLHAQLIAAKLNLPMPDVARAGEELLTAGVIFSTVDE 281
>ref|NP_067593.1| replication protein A2 [Rattus norvegicus]
gb|AAH79180.1| Replication protein A2 [Rattus norvegicus]
sp|Q63528|RFA2_RAT Replication protein A 32 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 2)
Length = 270
Score = 88.2 bits (217), Expect = 7e-16
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 15/235 (6%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A T F I VE+S + +VG + + T++V+ +DD T
Sbjct: 43 AQHIVPCTISQLLSATLTD---EVFKIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 99
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 100 APMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 159
Query: 687 LHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNP---VDGNYISNLVL----------S 547
L + H+ L S A + V PS NP GN+ N +
Sbjct: 160 LEVVNSHLML-------SKANSQASVGR-PSMSNPGMGEPGNFSGNNFMPANGLTVVQNQ 211
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
V + + GL+ +D+ +L+ +P + A+ + G+IY+T+DD H+KS
Sbjct: 212 VLNLIKACPRPEGLNFQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFKS 266
>emb|CAA67116.1| p32-subunit of replication protein A [Rattus norvegicus]
Length = 266
Score = 88.2 bits (217), Expect = 7e-16
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 15/235 (6%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A T F I VE+S + +VG + + T++V+ +DD T
Sbjct: 39 AQHIVPCTISQLLSATLTD---EVFKIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 95
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 96 APMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 155
Query: 687 LHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNP---VDGNYISNLVL----------S 547
L + H+ L S A + V PS NP GN+ N +
Sbjct: 156 LEVVNSHLML-------SKANSQASVGR-PSMSNPGMGEPGNFSGNNFMPANGLTVVQNQ 207
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
V + + GL+ +D+ +L+ +P + A+ + G+IY+T+DD H+KS
Sbjct: 208 VLNLIKACPRPEGLNFQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFKS 262
>gb|AAW43367.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_570674.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 251
Score = 87.4 bits (215), Expect = 1e-15
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
QT+ P+TVKQ +DA Q D ++F I+GV+V+ + L+G + T++ + + DGTG
Sbjct: 40 QTIRPVTVKQILDAQQVHPD-ADFTIDGVDVAQVLLIGSVRNMSTTATNISYEIGDGTGY 98
Query: 861 IDVNRWENEASD-AKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFL 685
ID W + A D + + ++YV ++G +K F GKRHV A +R +T+ NE+ H L
Sbjct: 99 IDARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLL 158
Query: 684 HCIQVHMELPG 652
+ V + L G
Sbjct: 159 KALYVSLILRG 169
>ref|XP_714857.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
ref|XP_714795.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
gb|EAK95816.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
gb|EAK95752.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
Length = 272
Score = 86.3 bits (212), Expect = 3e-15
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Frame = -2
Query: 1095 SQSTVVPENSGLSKGRSA----QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVG 928
SQ E++G S+ ++ Q+L P+T+KQ DA Q D F +N VE++ I VG
Sbjct: 18 SQGGFNTEHAGSSQRQTTTQVRQSLTPVTIKQINDATQPVPD-GEFKVNNVELNMISFVG 76
Query: 927 RMLGKVERVTDVVFTLDDGTGKIDVNRWENEA-SDAKEMADANNE---NYVIVIGGLKGF 760
+ + T++DGTG IDV +W +E S A+E + NE YV V G LK F
Sbjct: 77 VVRNVENTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEMKGKYVYVGGSLKQF 136
Query: 759 QGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPS----- 595
++ V ++ +T+ N+I H L I+ H++ G+ +++A G ++ +
Sbjct: 137 NNRKTVQNASISLITDSNQIVYHHLSAIEHHLKAQGITAADAASAGAGQATNSTASAGSG 196
Query: 594 --QPNPV----DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHV 433
NP D +++ V++V + S G+ + V ++L + + +
Sbjct: 197 LFMDNPTSLSKDTGSLTDQVIAVLKEAS-RTMPDGVPVDYVAEKLSITKEESQFQLLKLN 255
Query: 432 DVGNIYNTIDDFHY 391
D G Y DD Y
Sbjct: 256 DEGKAYAGYDDNSY 269
>ref|XP_758726.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
gb|EAK83749.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
Length = 285
Score = 85.9 bits (211), Expect = 3e-15
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 21/246 (8%)
Frame = -2
Query: 1068 SGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
SG G + TL P+T++Q ++A Q D + F ++G E+ + V + T+V
Sbjct: 39 SGKKAGNN--TLRPVTIRQILNAEQPHPD-AEFILDGAELGQLTFVAVVRNISRNATNVA 95
Query: 888 FTLDDGTGKIDVNRW-ENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 712
++++DGTG+I+V +W ++ + D+ + ++ N YV V+G LK FQ +R + + +R V +
Sbjct: 96 YSVEDGTGQIEVRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPVID 155
Query: 711 FNEITCHFLHCIQVHME------LPGLKQIYSSAA--TYGGV------AHAPSQPNPVDG 574
+NE+ H L + H++ LK S+A GG+ A++ S+ V+
Sbjct: 156 YNEVMFHRLEAVHAHLQATRGPTASALKGATSTALFNQAGGLESNDMNAYSGSKKQDVND 215
Query: 573 NY--ISNLVLSVFHDPSVMDQEH--GLHIKDVIDRLKLPDDV--VSAAIQGHVDVGNIYN 412
Y + L + + Q H G+H+ +I RL DV V +A++ G +Y
Sbjct: 216 LYKNLGELPQQIMSIVTRESQNHPDGVHV-SLIARLLNGVDVNDVKSAVEDLSSDGYLYT 274
Query: 411 TIDDFH 394
DD H
Sbjct: 275 AADDNH 280
>gb|AAS51744.1| ADL176Wp [Ashbya gossypii ATCC 10895]
ref|NP_983920.1| ADL176Wp [Eremothecium gossypii]
Length = 275
Score = 85.5 bits (210), Expect = 4e-15
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Frame = -2
Query: 1065 GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVF 886
G + G+S TL P+T+KQ ++A Q D + ++ +E+ I VG + V+ +V
Sbjct: 29 GSTGGQSTATLTPVTIKQILEAKQQVQD-GPYVVHSMELHNICFVGVVRNVVDNTANVNV 87
Query: 885 TLDDGTGKIDVNRWENEASDAK-----EMADANNE--------NYVIVIGGLKGFQGKRH 745
T++DGTG+I+ +W N+ D + E A+ N+E NYV V L+ F GK +
Sbjct: 88 TVEDGTGQIEFRQWSNDQKDMERASQGETAEYNSELSQQFQIGNYVKVFATLREFGGKMN 147
Query: 744 VVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPS------QPNP 583
+ V+ V NFNE+ H L I+ + G ++ AA + A A Q N
Sbjct: 148 IQYALVKPVENFNEVLAHHLAAIKCYALANG--RLAPPAAPFNAAAGAQGGQSLFVQDND 205
Query: 582 VDGNYISNLVLSVFHDPSVMDQE---HGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYN 412
+ + F D++ +H K + L + +D V Q + G IY
Sbjct: 206 YSSAKPATQRILDFCRDQCKDKDANTFSVHTKFIAQSLSMLEDDVRMHCQTLTEQGFIYP 265
Query: 411 TIDDFHY 391
T D+ Y
Sbjct: 266 TFDENSY 272
>ref|NP_001026063.1| replication protein A2, 32kDa [Gallus gallus]
emb|CAG31422.1| hypothetical protein [Gallus gallus]
Length = 267
Score = 84.7 bits (208), Expect = 7e-15
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
+Q+++P TV Q + A Q F I+ VE+S + +VG + + T++++ +DD T
Sbjct: 41 SQSIVPCTVSQLLAAEQVD---EAFRIHDVEISQVTVVGIVRHAEKAPTNILYKVDDMTA 97
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + E YV V G L+ FQ K+ +VA+ + + N NE T H
Sbjct: 98 APMDVRQWVDTDEAGSENIVVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHI 157
Query: 687 LHCIQVHMEL-------PGLKQIYSSAAT-----YGGVAHAPSQPNPVDGNYISNLVLSV 544
L + HM L Q ++SA YGG P + + NL+ +
Sbjct: 158 LETVNAHMILRKNLTLASRAPQSFTSAGMSDVGGYGG-GSLPVNGLTAHQSQVLNLIKNC 216
Query: 543 FHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
H P M + +K + + +P + A++ G+IY+T+DD HYKS
Sbjct: 217 -HSPEGMSLQ---ELKLQLHNVSIP--TIKQAVEFLSSEGHIYSTVDDDHYKS 263
>ref|XP_389900.1| hypothetical protein FG09724.1 [Gibberella zeae PH-1]
gb|EAA77773.1| hypothetical protein FG09724.1 [Gibberella zeae PH-1]
Length = 275
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/134 (32%), Positives = 75/134 (55%)
Frame = -2
Query: 1065 GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVF 886
G K ++L P+T+KQ +DA + ++F I+G V+ I +G++ + T++
Sbjct: 35 GGGKAYQDESLRPVTIKQILDAEEAYAG-ADFKIDGSPVTQITFIGQVRSVQPQPTNITL 93
Query: 885 TLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFN 706
+DDGTG+I+V +W + A ++++ + G LK F KRHV A+ +R V++FN
Sbjct: 94 KIDDGTGQIEVKKWIDVDKADDSEAGFELDSHIRIWGRLKSFNNKRHVGAHVIRPVSDFN 153
Query: 705 EITCHFLHCIQVHM 664
E+ H L VH+
Sbjct: 154 EVNYHMLEATYVHL 167
>ref|XP_454281.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG99368.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 273
Score = 82.8 bits (203), Expect = 3e-14
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 18/254 (7%)
Frame = -2
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQS+ NSG G++A TL P+T+KQ A Q D + I G E+ + VG +
Sbjct: 23 PSQSS--RPNSG---GQNANTLTPVTIKQMQSAKQQIQD-GPYVIMGQELHHVSFVGVIR 76
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMA--DANNE------------NYVIV 781
+ ++V T++DGTG+I+ +W N+++D + D N + Y+ V
Sbjct: 77 NVADNTSNVTLTVEDGTGQIEFRKWTNDSNDMSHASQEDQNGDYNSQVAQDYSVGKYIKV 136
Query: 780 IGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHA 601
L+ F GK +V V+ + +FNEI H L I+ G + S+ A G
Sbjct: 137 YASLREFSGKMNVQYAVVKHIDSFNEILAHHLEVIKAFAVANGNLSVDSTVAVNGANTET 196
Query: 600 PS---QPNPVDGNYISNLVLSVFHDPSVMD-QEHGLHIKDVIDRLKLPDDVVSAAIQGHV 433
S Q N + ++ + + D + K + L + +D V Q
Sbjct: 197 NSLFVQDNEPPKSATEKVLDFIRAQCAGKDSNSFSVQTKLISQSLNMIEDDVRMYCQTLT 256
Query: 432 DVGNIYNTIDDFHY 391
+ G IY T D+F +
Sbjct: 257 EQGYIYPTFDEFTF 270
>gb|AAH95005.1| Rpa2 protein [Danio rerio]
Length = 271
Score = 80.1 bits (196), Expect = 2e-13
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 17/247 (6%)
Frame = -2
Query: 1065 GLSKGRS-AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
G KGR+ AQ ++P TV Q + A Q F + VE++ + +VG + + ++
Sbjct: 31 GDKKGRTRAQQIVPCTVSQLLSAVQAE---DVFKVGEVEIAQVTIVGVIRSTDKSTINIQ 87
Query: 888 FTLDDGTGK-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 712
+ +DD T +DV +W + + + +YV V G L+ FQ R +VA++VR + +
Sbjct: 88 YKVDDMTAAPMDVKQWIDTEDMGVDNSVIPPGSYVKVSGNLRSFQNNRSLVAFSVRVLED 147
Query: 711 FNEITCHFLHCIQVHME-------------LPGLKQIYSSAATYGGVAHAPSQ-PNPVDG 574
NE+T H L + H++ +P +S T GG + A N +
Sbjct: 148 MNEVTSHMLEVVNAHLQQSKPQNMGGGGGMMPVSHTSMNSMGTTGGYSGANMMLVNGLSA 207
Query: 573 NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRL-KLPDDVVSAAIQGHVDVGNIYNTIDDF 397
N N VLS+ + G+ + ++ +L + +V+ + + G+I++TID+
Sbjct: 208 N--QNQVLSLIKS---CQEPQGISMHELKQKLNSMSANVIRQTVDFLSNEGHIFSTIDED 262
Query: 396 HYKSVRN 376
H++S N
Sbjct: 263 HFRSTDN 269
>ref|XP_513251.1| PREDICTED: hypothetical protein XP_513251 [Pan troglodytes]
Length = 381
Score = 79.7 bits (195), Expect = 2e-13
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 181 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 237
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 238 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 297
Query: 687 LHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNL 556
L I HM L PG+ S A +GG + P+ V N + NL
Sbjct: 298 LEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLTVAQNQVLNL 353
Query: 555 VLSVFHDPSVMDQEHGLHIKDVIDRLK 475
+ + GL+ +D+ ++LK
Sbjct: 354 I-------KACPRPEGLNFQDLKNQLK 373
>gb|AAH72101.1| MGC79017 protein [Xenopus laevis]
Length = 276
Score = 79.3 bits (194), Expect = 3e-13
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Frame = -2
Query: 1065 GLSKGRS-AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
G K RS +Q ++P TV Q + A Q F I E+S + +VG + + T+++
Sbjct: 38 GEKKSRSRSQQIVPCTVSQLLSATQND---EVFRIGEAELSQVTIVGIVRHAEKAPTNIL 94
Query: 888 FTLDDGTGK-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 712
+ +DD T +DV +W + + E +YV V G L+ FQ K+ VVA+ + V +
Sbjct: 95 YKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRSFQNKKSVVAFKIAPVED 154
Query: 711 FNEITCHFLHCIQVHMEL--------PGLKQIYSSAATYG--GVAHAPSQPNPVDG---- 574
NE H L + HM + G S+ G G A + NP +G
Sbjct: 155 MNEFVSHMLEVVHAHMAMNSQGAPSGGGSTVALSTPGRVGDSGRAFSGGNDNPTNGLTPH 214
Query: 573 -NYISNLVLSVFHDPSVMDQE-----HGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYN 412
+ I +L+ S + + +E HG+++ + + A++ + G+IY+
Sbjct: 215 QSQILSLIKSCKGNEGMAFEELKNRLHGMNV-----------NTIRQAVEFLSNEGHIYS 263
Query: 411 TIDDFHYK 388
TIDD HYK
Sbjct: 264 TIDDEHYK 271
>emb|CAG62496.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_449520.1| hypothetical protein CAGL0M03993g [Candida glabrata CBS138]
Length = 279
Score = 79.3 bits (194), Expect = 3e-13
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Frame = -2
Query: 1077 PENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVT 898
P G + TL P+T+KQ +D+ Q D F + E+ + VG + + +
Sbjct: 25 PNTMDSGTGSNTNTLTPVTIKQILDSQQAIQD-GPFITHNQELHHVCFVGVVRNITDHTS 83
Query: 897 DVVFTLDDGTGKIDVNRWENEASDAKEMADANN------------------ENYVIVIGG 772
++ TL+DGTG+I+V +W +++SD + D ++ YV V G
Sbjct: 84 NIYLTLEDGTGQIEVRKWSDDSSDVAQGTDGDDGFGEMKGGESQIAQQYQIGTYVKVFGA 143
Query: 771 LKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAA 625
LK F GK+++ ++ V +FN++ H L I+ H G Q S A+
Sbjct: 144 LKEFGGKKNIQYAVIKNVDSFNDVIAHHLEAIKCHAIANGKMQGSSLAS 192
>gb|AAH76661.1| Replication protein A2, 32kDa [Xenopus tropicalis]
ref|NP_001006795.1| replication protein A2, 32kDa [Xenopus tropicalis]
Length = 275
Score = 78.6 bits (192), Expect = 5e-13
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Frame = -2
Query: 1065 GLSKGRS-AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
G K RS +Q ++P TV Q + A Q F I E+S + +VG + + T+++
Sbjct: 37 GEKKSRSRSQQIVPCTVSQLLSATQND---EMFRIGEAELSQVTIVGIVRHAEKAPTNIL 93
Query: 888 FTLDDGTGK-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 712
+ +DD T +DV +W + + E +YV V G L+ FQ K+ VVA+ + V +
Sbjct: 94 YKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRSFQNKKSVVAFKIAPVDD 153
Query: 711 FNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQP---------------NPVD 577
NE H L + HM + A + GG A A + P N +
Sbjct: 154 MNEFVSHMLEVVHAHMTMNS-----QGAPSGGGSAVALNTPGRLGDSGGAFSGGNDNATN 208
Query: 576 G-----NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIY 415
G + I NL+ S G+ +++ +RL + + + A+ + G+IY
Sbjct: 209 GLTPHQSQILNLIKS-------FKGNEGMAFEELKNRLHGMNVNTIRQAVDFLSNEGHIY 261
Query: 414 NTIDDFHYKS 385
+T+DD HYKS
Sbjct: 262 STVDDEHYKS 271
>ref|XP_961967.1| hypothetical protein [Neurospora crassa N150]
ref|XP_328423.1| hypothetical protein [Neurospora crassa]
gb|EAA32731.1| hypothetical protein [Neurospora crassa]
Length = 284
Score = 78.2 bits (191), Expect = 7e-13
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
++L P+T+KQ +D +T + AI+G V+ + +VG++ + T++ + +DDGTG
Sbjct: 34 ESLRPVTIKQLLDWEETFPG-AELAIDGHPVTQVTIVGQVRSVKPQPTNITYRIDDGTGA 92
Query: 861 IDVNRW-ENEASDAKEMADANN----ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEIT 697
IDV +W ++EA ++ + +V V G LK GK+HV A +R++ +FNE+
Sbjct: 93 IDVKKWVDSEAQGGEDGGSGAGTIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVN 152
Query: 696 CHFLHCIQVHM 664
H L VH+
Sbjct: 153 YHLLEATYVHL 163
>gb|EAQ88020.1| hypothetical protein CHGG_04639 [Chaetomium globosum CBS 148.51]
Length = 267
Score = 77.8 bits (190), Expect = 9e-13
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Frame = -2
Query: 1074 ENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTD 895
++ G + + TL P+T+KQ +D + S A++G+ + + LVG++ +
Sbjct: 23 QSGGSGRNYADDTLRPVTIKQLVDCKEPYPG-SELAVDGLPTTQVTLVGQVRSSTVQSIY 81
Query: 894 VVFTLDDGTGKIDVNRWENEASDAKEMADA-NNENYVIVIGGLKGFQGKRHVVAYAVRRV 718
+ +DDGTG IDV ++ + SD + A + YV V G L + GKR V A+ +R +
Sbjct: 82 TTYRIDDGTGLIDVKKFVD--SDRPDTAVTFAPDTYVRVFGRLMSYNGKRTVTAHNIRAI 139
Query: 717 TNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDGNY---------- 568
+FNE+ H L VH+ L K ++ G A VDG Y
Sbjct: 140 DDFNEVNYHLLEATYVHLAL--TKGSAAAGQAGAGGTDADGDSMFVDGGYGAGGGGAGGA 197
Query: 567 -------ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNT 409
S +VF+ + EH ++ V+ ++ V+AA + G IY T
Sbjct: 198 ADARLATCSPAARTVFNFMANSPGEH-TNVGQVVAGTRMSAADVTAAADELLAGGIIYTT 256
Query: 408 IDD 400
DD
Sbjct: 257 DDD 259
>emb|CAA96241.1| RFA2 [Saccharomyces cerevisiae]
emb|CAA42421.1| replication factor-A protein 2 [Saccharomyces cerevisiae]
ref|NP_014087.1| Subunit of heterotrimeric Replication Factor A (RF-A), which is a
highly conserved single-stranded DNA binding protein
involved in DNA replication, repair, and recombination;
Rfa2p [Saccharomyces cerevisiae]
gb|AAB27888.1| BUF1 [Saccharomyces cerevisiae]
sp|P26754|RFA2_YEAST Replication factor-A protein 2 (RF-A) (DNA binding protein BUF1)
(Replication protein A 36 kDa subunit)
Length = 273
Score = 73.6 bits (179), Expect = 2e-11
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Frame = -2
Query: 1038 TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKI 859
TL P+T+KQ +++ Q D F + E+ + VG + + ++ T++DGTG+I
Sbjct: 38 TLTPVTIKQILESKQDIQD-GPFVSHNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQI 96
Query: 858 DVNRWENEASDAKEMADANNEN-----------------YVIVIGGLKGFQGKRHVVAYA 730
+V +W +A+D +A N+++ YV V G LK F GK+++
Sbjct: 97 EVRKWSEDAND---LAAGNDDSSGKGYGSQVAQQFEIGGYVKVFGALKEFGGKKNIQYAV 153
Query: 729 VRRVTNFNEITCHFLHCIQVHMELPG-LKQIYSSAATYGG 613
++ + +FNE+ H L I+ H G +KQ SA+ G
Sbjct: 154 IKPIDSFNEVLTHHLEVIKCHSIASGMMKQPLESASNNNG 193
>ref|NP_585792.1| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
emb|CAD25396.1| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
Length = 274
Score = 72.8 bits (177), Expect = 3e-11
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = -2
Query: 1041 QTLLPLTVKQ--TMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGT 868
+TL LT+KQ + D +TS S ++ EV+ ++++G ++ T +F L+DGT
Sbjct: 69 KTLRALTIKQIGSCDFDETS---STHLVDSAEVTNVQIIGWVVSSKTSATGSMFVLEDGT 125
Query: 867 GKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
G +D W + + ++ +N + V G L+ F GKR V A + V + N +T HF
Sbjct: 126 GSVDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTFNGKRSVSASHLSAVEDSNFVTYHF 185
Query: 687 LHCIQVHM 664
L CI H+
Sbjct: 186 LSCIYQHL 193
>gb|AAW25942.1| SJCHGC02904 protein [Schistosoma japonicum]
Length = 262
Score = 72.4 bits (176), Expect = 4e-11
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Frame = -2
Query: 1071 NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDV 892
++G K T++P T + + AA GD+ + G+E S I +VG + E T V
Sbjct: 27 SAGQKKINYQGTIVPCTCAEIL-AANQDGDKF-VSPCGLEFSQITVVGIVRSVNESSTRV 84
Query: 891 VFTLDDGTGKIDVNRWENEASDAKEMADAN---NENYVIVIGGLKGFQGKRHVVAYAVRR 721
+ +DD TG ++ E D+ + +YV V G ++ FQG +HV+A+ V
Sbjct: 85 EYEIDDYTGPYLPVKFFTEDQDSTSSIQSRPFRELSYVRVHGHVRNFQGVKHVIAFRVIY 144
Query: 720 VTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVD--GNYISNLVLS 547
V++ NE+T H L I M +K S G+ + N V N ++ L
Sbjct: 145 VSDMNELTTHILEVIYARMLYIKMKHDESDGINNKGIFTESASNNAVGTVSNGLTVLQNQ 204
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ E G+ I + ++L+ +P+ + + G++Y+T+DD H+++
Sbjct: 205 ILAIVRTFIGERGIPISQLTEKLRGIPERQIREDLDFLSAEGHVYSTVDDDHFRA 259
>pdb|1QUQ|C Chain C, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
pdb|1QUQ|A Chain A, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
Length = 129
Score = 72.0 bits (175), Expect = 5e-11
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 1 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 57
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 58 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 117
Query: 687 LHCIQVHMEL 658
L I HM L
Sbjct: 118 LEVINAHMVL 127
>emb|CAI21776.1| replication protein A2, 32kDa [Homo sapiens]
Length = 179
Score = 72.0 bits (175), Expect = 5e-11
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = -2
Query: 1044 AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTG 865
AQ ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 47 AQHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 103
Query: 864 K-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H
Sbjct: 104 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 163
Query: 687 LHCIQVHMEL 658
L I HM L
Sbjct: 164 LEVINAHMVL 173
>pdb|1L1O|E Chain E, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
pdb|1L1O|B Chain B, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 128
Score = 70.5 bits (171), Expect = 1e-10
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
Q ++P T+ Q + A F I VE+S + +VG + + T++V+ +DD T
Sbjct: 1 QHIVPCTISQLLSATLVD---EVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAA 57
Query: 861 -IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFL 685
+DV +W + + E E YV V G L+ FQ K+ +VA+ + + + NE T H L
Sbjct: 58 PMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHIL 117
Query: 684 HCIQVHMEL 658
I HM L
Sbjct: 118 EVINAHMVL 126
>gb|AAT08661.1| single-stranded DNA-binding replication protein A [Hyacinthus
orientalis]
Length = 88
Score = 70.1 bits (170), Expect = 2e-10
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = -2
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
I +VL VF +PS + +HG+H+ +V+ RL LP+ + AI HVD G+IY+TIDD+H+K
Sbjct: 27 IYKMVLDVFQEPSSLASDHGVHVDEVVKRLGLPEKKIKEAIDYHVDTGHIYSTIDDYHFK 86
Query: 387 S 385
+
Sbjct: 87 A 87
>ref|XP_504973.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG77780.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 238
Score = 69.7 bits (169), Expect = 2e-10
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 6/234 (2%)
Frame = -2
Query: 1065 GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVF 886
G K ++ +++P+T+KQ DA S I+GV + L G+++ + + +
Sbjct: 14 GSQKPANSGSVIPVTLKQLNDAFNNSPPAGALQIDGVPSQHVALCGKIILLESKPSFFML 73
Query: 885 TLDDGTGKIDVNRWENEASDAKEMADANNE------NYVIVIGGLKGFQGKRHVVAYAVR 724
T+DDGTG DV + D D N+E +Y+ + LK F K V + V
Sbjct: 74 TVDDGTGSTDVRLFRKGTED-----DENSELTVKEGDYISCVAALKSFNNKWMVNSSGVA 128
Query: 723 RVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSV 544
VT+FN + H + +Q H++ G K S G + + S + + ++ + +
Sbjct: 129 AVTDFNHVIFHQMQSLQTHLKATGAK---PSGGADGVKSESKSGADLFVADNSNDALFEI 185
Query: 543 FHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSV 382
+ +VM + G+ + + K+ D +Q + G + +D+ HY +
Sbjct: 186 VRELTVMCPD-GVPTEQIASVAKMSVDESRDKLQELITEGRVMECMDN-HYMCI 237
>gb|AAG12435.1| replication protein A [Danio rerio]
ref|NP_571786.1| replication protein A2 [Danio rerio]
Length = 272
Score = 68.9 bits (167), Expect = 4e-10
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = -2
Query: 1065 GLSKGRS-AQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
G KGR+ AQ ++P TV Q + A Q F + VE++ + +VG + + ++
Sbjct: 31 GDKKGRTRAQQIVPCTVSQLLSAVQAE---DVFKVGEVEIAQVTIVGVIRSTDKSTINIQ 87
Query: 888 FTLDDGTGK-IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 712
+ +DD T +DV +W + + + +YV V G L+ FQ R +VA++VR + +
Sbjct: 88 YKVDDMTAAPMDVKQWIDTEDMGVDNSVIPPGSYVKVSGNLRSFQNNRSLVAFSVRVLED 147
Query: 711 FNEITCHFLHCIQVHME 661
NE+T H L + H++
Sbjct: 148 MNEVTSHMLEVVNAHLQ 164
>dbj|BAD69790.1| Replication protein A middle subunit [Bombyx mori]
Length = 259
Score = 64.7 bits (156), Expect = 8e-09
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Frame = -2
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
+T P+ +G R+A P+ ++Q + + + I G E+ + +V R+
Sbjct: 20 NTATPKKTGRRAARTA----PIVIRQALHSGE-----EGVKIWGTEIQIVSIVARIRSIR 70
Query: 909 ERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANN-----ENYVIVIGGLKGFQGKRH 745
+ T + +T+ D TG++ W ++ +A E+ D ++ +Y+ + G +K +G +
Sbjct: 71 MQSTKITYTIQDITGRMRAVLWLDQ--EAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKV 128
Query: 744 VVAYAVRRVTNFNEITCHFLHCI--QVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDGN 571
++A+ + VT+ N IT H+ CI ++ ME K+ + A S + +
Sbjct: 129 LMAFKIMPVTDVNIITFHYFQCIHNKIQMEAGSKKEKNIQDVPINNMLPANSMVGITETS 188
Query: 570 YISNL---VLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVD----VGNIYN 412
++ L + VF+ E G+ +D+ LK D + + ++ G+IY+
Sbjct: 189 SVNGLNSRQMMVFNLIRGSTVEQGISKQDMYASLK--DRMTKVEFENILEWMCGEGHIYS 246
Query: 411 TIDDFHYKS 385
TID+ H+++
Sbjct: 247 TIDEEHFRA 255
>gb|EAL33908.1| GA21663-PA [Drosophila pseudoobscura]
Length = 232
Score = 61.6 bits (148), Expect = 7e-08
Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Frame = -2
Query: 1068 SGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
+G + + + ++PL +KQ +DA + N + G++ LV + T +
Sbjct: 11 AGAASNQKGEGIVPLFIKQIVDAPE-----GNIELFGMQFGMACLVAIVRNVETSSTKIT 65
Query: 888 FTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNF 709
+TL+D +G+ID + W E DA + + NYV V G + G++ ++ + + V +
Sbjct: 66 YTLEDHSGRIDAHYWLEEG-DALKAPEVMLNNYVKVYGTTRSQAGQKSLMVFKLLPVLDP 124
Query: 708 NEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPS 529
NE+ H L + + + S+A V + + N + +VF
Sbjct: 125 NEVCTHLLEALNARYKAEDYQNKGGSSAM---VPDFTASQSTAIVNGLDPKQQAVFQAIK 181
Query: 528 VMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHY 391
E G++ K++ + + D ++ + + G+IY++ID H+
Sbjct: 182 SNMSEEGINRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHF 228
>gb|AAI04014.1| Replication protein A4, 34kDa [Homo sapiens]
gb|AAH69808.1| Replication protein A4, 34kDa [Homo sapiens]
gb|AAI04015.1| Replication protein A4, 34kDa [Homo sapiens]
gb|AAM09569.1| replication protein A complex 34 kDa subunit RPA4 [Homo sapiens]
emb|CAI42256.1| replication protein A4, 34kDa [Homo sapiens]
gb|AAH69824.1| Replication protein A4, 34kDa [Homo sapiens]
ref|NP_037479.1| replication protein A4, 34kDa [Homo sapiens]
gb|AAH69791.1| Replication protein A4, 34kDa [Homo sapiens]
gb|AAB08488.2| replication protein A complex 34 kd subunit homolog Rpa4 [Homo
sapiens]
sp|Q13156|RFA4_HUMAN Replication protein A 30 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 4)
Length = 261
Score = 60.5 bits (145), Expect = 2e-07
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
Q ++P V Q + + F + G+ VS + +VG + G + + + +DD T K
Sbjct: 44 QDVVPCNVNQLLSSTVFD---PVFKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAK 100
Query: 861 -IDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFL 685
I+ +W K++ + YV V G LK G + + + + + NE T H L
Sbjct: 101 PIEARQWFGREK-VKQVTPLSVGVYVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHIL 159
Query: 684 HCIQVHMELPGLKQIYSSAATYGGVAHAPSQPNPVDG------NYISNLVLSVFHDPSVM 523
+ HM L ++ T V +PS+ N N+I + VL + H+
Sbjct: 160 ETVNAHMMLDKARR----DTTVESVPVSPSEVNDAGDNDESHRNFIQDEVLRLIHE---C 212
Query: 522 DQEHGLHIKDVIDRL-KLPDDVVSAAIQGHVDVGNIYNTIDDFHYKS 385
+ G I ++ +L L + AI G+IY T+D H+KS
Sbjct: 213 PHQEGKSIHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKS 259
>ref|NP_610077.1| CG9273-PA [Drosophila melanogaster]
gb|AAL39404.1| GM04951p [Drosophila melanogaster]
gb|AAF53948.2| CG9273-PA [Drosophila melanogaster]
Length = 246
Score = 57.8 bits (138), Expect = 1e-06
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 7/233 (3%)
Frame = -2
Query: 1068 SGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
+G + + + ++PL VKQ +DA + N + G++ + +V + T +
Sbjct: 16 TGAASNQKGEGIVPLVVKQIVDAPE-----GNIELFGMQYAMACVVAIVRNVETSSTKIT 70
Query: 888 FTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNF 709
+TL+D +G+ID + W E DA + + NYV V G + G + ++ + + V +
Sbjct: 71 YTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLDP 129
Query: 708 NEITCHFLHCIQV------HMELPGLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLS 547
NE+ H L + + G +++ G +A + + + + +
Sbjct: 130 NEVCTHLLEVLNARYRAEDYQSKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEPKQQA 189
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHY 391
VF E G+ K++ + + D ++ + + G+IY++ID H+
Sbjct: 190 VFQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHF 242
>gb|AAL90389.1| RH07841p [Drosophila melanogaster]
Length = 246
Score = 57.0 bits (136), Expect = 2e-06
Identities = 47/233 (20%), Positives = 101/233 (43%), Gaps = 7/233 (3%)
Frame = -2
Query: 1068 SGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV 889
+G + + + ++PL VKQ +DA + N + G++ + +V + T +
Sbjct: 16 TGAASNQKGEGIVPLVVKQIVDAPE-----GNIELFGMQYAMACVVAIVRNVETSSTKIT 70
Query: 888 FTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNF 709
+TL+D +G+ID + W E DA + + NYV V G + G + ++ + + + +
Sbjct: 71 YTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPILDP 129
Query: 708 NEITCHFLHCIQVHMELP------GLKQIYSSAATYGGVAHAPSQPNPVDGNYISNLVLS 547
NE+ H L + G +++ G +A + + + + +
Sbjct: 130 NEVCTHLLEVLNARYRAEDCQSKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEPKQQA 189
Query: 546 VFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTIDDFHY 391
VF E G+ K++ + + D ++ + + G+IY++ID H+
Sbjct: 190 VFQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHF 242
>ref|XP_529067.1| PREDICTED: similar to diaphanous 2 isoform 156 [Pan troglodytes]
Length = 829
Score = 52.8 bits (125), Expect = 3e-05
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Frame = -2
Query: 942 IRLVGRMLGKVERVTDVVFTLDDGTGK-IDVNRWENEASDAKEMADANNENYVIVIGGLK 766
+ +VG + G + + + +DD T K I+V +W K++ + YV V G LK
Sbjct: 251 VSIVGVIRGAEKASNHICYKIDDMTAKPIEVRQWFGREK-VKQVTPLSVGVYVKVFGILK 309
Query: 765 GFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAATYGGVAHAPSQPN 586
G + + + + + NE T H L + HM L ++ T V +PS+ N
Sbjct: 310 CPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARR----DTTVESVPVSPSEVN 365
Query: 585 PVDG------NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRL-KLPDDVVSAAIQGHVDV 427
N+I + VL + H+ + G I ++ +L L + AI
Sbjct: 366 DAGDNDESHRNFIQDEVLRLIHE---CPHQEGKSIHELRAQLCDLSVKAIKEAIDYLTVE 422
Query: 426 GNIYNTIDDFHYKSVRN 376
G+IY T+D H+ V N
Sbjct: 423 GHIYPTVDREHFNWVNN 439
>gb|AAX79127.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei]
gb|AAZ11285.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei]
ref|XP_825331.1| replication Factor A 28 kDa subunit [Trypanosoma brucei TREU927]
Length = 255
Score = 50.1 bits (118), Expect = 2e-04
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Frame = -2
Query: 1071 NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDV 892
++ ++ R + P+T+KQ ++A + + I+G EV+ +VGR++G E +D
Sbjct: 16 SNAATQQRRVHPIRPVTIKQLLEAQRVGEGVT--VIDGREVTQATVVGRVVG-YENDSDN 72
Query: 891 VFT------------LDDGTGKIDVNRWENEASDAKEMADANN-ENYVIVIGGLKGFQGK 751
F+ + DGTG + V +W DA + D + YV G +K +Q
Sbjct: 73 RFSGGALTAKHHGYRITDGTGVVVVRQW----MDADQQDDPLPLQCYVRAAGTVKMWQNS 128
Query: 750 RHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLKQIYSSAA 625
+V VR V++ NE+ HFL I H+ L + SSAA
Sbjct: 129 P-IVTGTVRLVSDCNELNYHFLDVILTHLRLTQGSRRPSSAA 169
>ref|XP_807521.1| replication Factor A 28 kDa subunit [Trypanosoma cruzi strain CL
Brener]
gb|EAN85670.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi]
Length = 264
Score = 49.7 bits (117), Expect = 3e-04
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Frame = -2
Query: 1050 RSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVV------ 889
R + P+T+KQ ++A + ++G EV+ +VGR++G + T+ V
Sbjct: 32 RRMHPIRPVTIKQLLEAQRVG--EGVMVVDGREVTQATVVGRVIGYEDDTTNRVTGALTA 89
Query: 888 ----FTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRR 721
+ + DGTG + V +W +A +E + YV G +K +Q +V VR
Sbjct: 90 KHYGYRITDGTGLVVVRQWM-DADHQEEPLPV--QCYVRASGTVKVWQNAP-IVTGTVRL 145
Query: 720 VTNFNEITCHFLHCIQVHMEL 658
V++ NE+ H+L I H+ L
Sbjct: 146 VSDCNELNYHYLDVILTHLRL 166
>gb|EAA43853.2| ENSANGP00000023457 [Anopheles gambiae str. PEST]
ref|XP_317126.2| ENSANGP00000023457 [Anopheles gambiae str. PEST]
Length = 246
Score = 49.7 bits (117), Expect = 3e-04
Identities = 29/130 (22%), Positives = 61/130 (46%)
Frame = -2
Query: 1065 GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVF 886
G A+ +LPL ++Q ++++ ++ G + + I LV + T V +
Sbjct: 18 GAGNENKAEGVLPLVIEQVLESSD-----GGISLFGHQYAMITLVAIIRNVDYSSTKVTY 72
Query: 885 TLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFN 706
L+D TG+ID + W E ++Y V+G ++ G + ++ + + ++ + N
Sbjct: 73 QLEDHTGRIDAHLWI-EDDGVTSTPSIVPQSYARVVGSVRNQGGSKSIMIFKIDQINSPN 131
Query: 705 EITCHFLHCI 676
E+T H L +
Sbjct: 132 EVTTHLLEVL 141
>gb|EAA12428.2| ENSANGP00000018307 [Anopheles gambiae str. PEST]
ref|XP_317127.1| ENSANGP00000018307 [Anopheles gambiae str. PEST]
Length = 247
Score = 49.7 bits (117), Expect = 3e-04
Identities = 29/130 (22%), Positives = 61/130 (46%)
Frame = -2
Query: 1065 GLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVF 886
G A+ +LPL ++Q ++++ ++ G + + I LV + T V +
Sbjct: 18 GAGNENKAEGVLPLVIEQVLESSD-----GGISLFGHQYAMITLVAIIRNVDYSSTKVTY 72
Query: 885 TLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFN 706
L+D TG+ID + W E ++Y V+G ++ G + ++ + + ++ + N
Sbjct: 73 QLEDHTGRIDAHLWI-EDDGVTSTPSIVPQSYARVVGSVRNQGGSKSIMIFKIDQINSPN 131
Query: 705 EITCHFLHCI 676
E+T H L +
Sbjct: 132 EVTTHLLEVL 141
>ref|XP_508712.1| PREDICTED: similar to contactin 5 isoform short; neural adhesion
molecule [Pan troglodytes]
Length = 875
Score = 47.4 bits (111), Expect = 0.001
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = -2
Query: 972 FAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK-IDVNRWENEASDAKEMADANNE 796
F I E+S I LVG + + T++V+ LDD T ++V +W + + E E
Sbjct: 608 FKIGNAEISQITLVGIIRHAEKTSTNIVYKLDDMTAAPMNVRQWVDTDDTSSENTVVPPE 667
Query: 795 NYVIVIGGLKGFQGKRHVVAY 733
YV V G L+ FQ K+ +V Y
Sbjct: 668 TYVKVAGHLRSFQNKKSLVGY 688
>emb|CAJ03255.1| replication Factor A 28 kDa subunit, putative [Leishmania major]
Length = 257
Score = 46.6 bits (109), Expect = 0.002
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Frame = -2
Query: 1071 NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVE----- 907
N G R + PLT+KQ ++A G ++G EV+ +VGR++G
Sbjct: 20 NGGQQPQRRMHPIRPLTIKQMLEAQSVGG--GVLVVDGREVTQATVVGRVVGYENANMAS 77
Query: 906 -----RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHV 742
+ + D TG + V +W DA M + N + G + +
Sbjct: 78 GGGAITAKHFGYRITDNTGMLVVRQW----IDADRMQEPLAINTHVRASGTVNVWQQTPI 133
Query: 741 VAYAVRRVTNFNEITCHFLHCIQVHMEL-PGLKQIYSSAATYGGVAHAPSQPNPVDG 574
V V + + NE+ H L I H L G K+ SS + A A N + G
Sbjct: 134 VTGTVVSMADSNEMNYHMLDAILTHFRLTQGNKRAPSSGVSIQNTASAVGMHNMLPG 190
>emb|CAI21774.1| replication protein A2, 32kDa [Homo sapiens]
Length = 122
Score = 45.4 bits (106), Expect = 0.005
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Frame = -2
Query: 714 NFNEITCHFLHCIQVHMEL----------------PGLKQIYSSAATYGGVAHAPSQPNP 583
+ NE T H L I HM L PG+ S A +GG + P+
Sbjct: 3 DMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGM----SEAGNFGGNSFMPANGLT 58
Query: 582 VDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDVVSAAIQGHVDVGNIYNTI 406
V N + NL+ + GL+ +D+ ++LK + + A+ + G+IY+T+
Sbjct: 59 VAQNQVLNLI-------KACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTV 111
Query: 405 DDFHYKS 385
DD H+KS
Sbjct: 112 DDDHFKS 118
>emb|CAI74950.1| hypothetical protein [Theileria annulata]
ref|XP_952682.1| hypothetical protein TA11650 [Theileria annulata strain Ankara]
Length = 308
Score = 43.5 bits (101), Expect = 0.019
Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 36/225 (16%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
+T +PL + + +T G N + G ++ I+L+G + E D F +DDGTG
Sbjct: 54 KTFMPLKINMIYSSWKTGGVSIN--VYGYQLDIIKLIGYVKEAKETDQDTSFLIDDGTGT 111
Query: 861 I--------DVNRWE-NEASDAKEMADANNENYVIVIGGLKGFQGKRH--VVAYAVRRVT 715
I D++ W+ N S+ A V + GG ++ Y+++ VT
Sbjct: 112 IECIHLSPGDISDWKRNYISELTRTKSA-----VKIYGGFNPLYSSSSPTIIIYSIKEVT 166
Query: 714 NFNEITCHFLHC-----------------------IQVHMELP--GLKQIYSSAATYGGV 610
+ EI H L I + + P L I S+ Y
Sbjct: 167 SPEEIKLHNLDIDGKRNPNVMDTIGEMDSILKEFDISIPKQQPDNSLDNILSTTTDYSPT 226
Query: 609 AHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK 475
+ A PV+ ++ + S+ + S + +GLHI ++ R +
Sbjct: 227 STAKI---PVNELALTKFISSMLANESRNNNYNGLHISEITRRCR 268
>ref|XP_764591.1| hypothetical protein TP02_0022 [Theileria parva strain Muguga]
gb|EAN32308.1| hypothetical protein TP02_0022 [Theileria parva]
Length = 314
Score = 43.1 bits (100), Expect = 0.025
Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 38/227 (16%)
Frame = -2
Query: 1041 QTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGK 862
+T +PL + + +T G N + G + I+LVG + E D F +DDGTG
Sbjct: 54 KTFMPLKINMIYSSWKTGGVSIN--VFGYHLDIIKLVGYVKDAKETEQDTSFVIDDGTGT 111
Query: 861 I--------DVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRH--VVAYAVRRVTN 712
I D++ W+ S E+ ++ V + GG ++ Y+++ VT+
Sbjct: 112 IECIHLSPGDISDWKR--SYISEL--TRTKSPVKIYGGFNPLYSSSSPTIIIYSIKEVTS 167
Query: 711 FNEITCHFLHCIQVHMELPG----------------------------LKQIYSSAATYG 616
EI H L I + + G + Q +
Sbjct: 168 PEEIKLHNLDVIYSVLLIDGKRNPNLMDTIGEMDTILKEFDISIPKEQVDQPLDNVPPTT 227
Query: 615 GVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK 475
A + PV+ ++ + S+ + S + +GLHI +++ R K
Sbjct: 228 DTASTSTTKIPVNELALTKFISSMLANESRNNNYNGLHISEILRRCK 274
>emb|CAA80683.1| 28 kilodalton subunit of replication protein A [Crithidia
fasciculata]
sp|Q23697|RFA2_CRIFA Replication protein A 28 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 2)
Length = 258
Score = 40.4 bits (93), Expect = 0.16
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Frame = -2
Query: 1089 STVVPENSGLSKGRSAQ-TLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGK 913
S N G + + Q + PLT+KQ ++A G ++G EV+ +VGR++G
Sbjct: 11 SAAASSNGGQQQQQRRQHPIRPLTIKQMLEAQSVGG--GVMVVDGREVTQATVVGRVVGY 68
Query: 912 VE----------RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 763
+ + D TG I V +W +A A+E N +V G +
Sbjct: 69 ENANMASGGGAITAKHFGYRITDNTGMIVVRQW-IDADRAQEPIPLN--THVRASGTVNV 125
Query: 762 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMEL 658
+Q + +V V + + NE+ H L I H+ L
Sbjct: 126 WQ-QSPIVTGTVVSMADSNEMNYHMLDAILTHLRL 159
>ref|XP_728005.1| hypothetical protein PY07197 [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA19570.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 273
Score = 38.5 bits (88), Expect = 0.61
Identities = 29/137 (21%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Frame = -2
Query: 1029 PLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVN 850
P+T+K ++ + NF I+ ++S I + G++ E + ++F + D TG I+
Sbjct: 56 PVTIKLLLNKMMNN---ENFEIHNFQISGIIIFGKITNVKELASAIIFEICDYTGTIEA- 111
Query: 849 RWENEASDAKEMADANN---ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLH- 682
++ +A + K N ++V ++GG+ + K V ++ + ++ +F +
Sbjct: 112 KYNKDAKNDKIKNHIENLKVNDHVKIVGGVYSPESKTEQVQISISYINKMDDWVSYFSYF 171
Query: 681 ---CIQVHMELPGLKQI 640
I +++L LK I
Sbjct: 172 TSEIIYCYLKLLKLKNI 188
>gb|AAZ80925.1| 32kDa replication protein A2 [Macaca mulatta]
Length = 102
Score = 38.1 bits (87), Expect = 0.80
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -2
Query: 636 SSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDV 460
S A +GG + P+ V N + NL+ + GL+ +D+ ++LK +
Sbjct: 21 SEAGNFGGNSFLPANGLTVAQNQVLNLI-------KACPRPEGLNFQDLKNQLKHMSVSS 73
Query: 459 VSAAIQGHVDVGNIYNTIDDFHYKS 385
+ A+ + G+IY+T+DD H+KS
Sbjct: 74 IKQAVDFLSNEGHIYSTVDDDHFKS 98
>pdb|1Z1D|A Chain A, Structural Model For The Interaction Between Rpa32 C-
Terminal Domain And Sv40 T Antigen Origin Binding Domain
Length = 103
Score = 38.1 bits (87), Expect = 0.80
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -2
Query: 636 SSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDV 460
S A +GG + P+ V N + NL+ + GL+ +D+ ++LK +
Sbjct: 22 SEAGNFGGNSFMPANGLTVAQNQVLNLI-------KACPRPEGLNFQDLKNQLKHMSVSS 74
Query: 459 VSAAIQGHVDVGNIYNTIDDFHYKS 385
+ A+ + G+IY+T+DD H+KS
Sbjct: 75 IKQAVDFLSNEGHIYSTVDDDHFKS 99
>pdb|1DPU|A Chain A, Solution Structure Of The C-Terminal Domain Of Human Rpa32
Complexed With Ung2(73-88)
Length = 99
Score = 38.1 bits (87), Expect = 0.80
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -2
Query: 636 SSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLK-LPDDV 460
S A +GG + P+ V N + NL+ + GL+ +D+ ++LK +
Sbjct: 18 SEAGNFGGNSFMPANGLTVAQNQVLNLI-------KACPRPEGLNFQDLKNQLKHMSVSS 70
Query: 459 VSAAIQGHVDVGNIYNTIDDFHYKS 385
+ A+ + G+IY+T+DD H+KS
Sbjct: 71 IKQAVDFLSNEGHIYSTVDDDHFKS 95
>ref|XP_743944.1| hypothetical protein [Plasmodium chabaudi chabaudi]
emb|CAH76068.1| conserved hypothetical protein [Plasmodium chabaudi]
Length = 187
Score = 37.0 bits (84), Expect = 1.8
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = -2
Query: 1029 PLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVN 850
P+T+K ++ S NF I+ ++S I + G++ E + ++F + D TG I+
Sbjct: 56 PITIKLLLNKMMHS---ENFEIHDFQISGIIVFGKITNVKELASAIIFEICDYTGTIEA- 111
Query: 849 RWENEASDAKEMADANN---ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHF 688
++ +A + K N ++V ++GG+ + K V ++ + ++ +F
Sbjct: 112 KYNKDAKNDKIKNHIENLKVNDHVKIVGGVYSPESKTEQVQISISYINKVDDWVSYF 168
>gb|AAT29571.1| prophage LambdaBa04, tape measure protein, putative [Bacillus
anthracis str. 'Ames Ancestor']
gb|AAT52785.1| prophage LambdaBa04, tape measure protein, putative [Bacillus
anthracis str. Sterne]
ref|YP_026734.1| prophage LambdaBa04, tape measure protein, putative [Bacillus
anthracis str. Sterne]
gb|AAP24502.1| prophage LambdaBa04, tape measure protein, putative [Bacillus
anthracis phage lambda Ba01]
ref|YP_017096.1| prophage lambdaba04, tape measure protein, putative [Bacillus
anthracis str. 'Ames Ancestor']
ref|NP_843016.1| prophage LambdaBa04, tape measure protein, putative [Bacillus
anthracis str. Ames]
Length = 1311
Score = 34.7 bits (78), Expect = 8.8
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Frame = -2
Query: 1074 ENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAI-NGVEVS-----TIRLVGR-MLG 916
+ S R +TL T K D A G+R AI NG S I +VGR LG
Sbjct: 124 QEKAASSTRQLETLFSATGKSVDDFADALGNRLVNAIKNGTASSRQLEQAIEIVGREALG 183
Query: 915 K---VERVTDVVFTLDDGTG----KIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQ 757
+ ++ + ++DDG + D+N+ EA +A E V+GG+
Sbjct: 184 AEADIGKLQQALRSVDDGNSIQNIRNDLNQLSQEAEEASESVKGLGVELENVLGGIVAGG 243
Query: 756 GKRHVVAYAV 727
G + V+ A+
Sbjct: 244 GIQEVIGQAL 253
>ref|ZP_00390860.1| COG5280: Phage-related minor tail protein [Bacillus anthracis str.
A2012]
Length = 1311
Score = 34.7 bits (78), Expect = 8.8
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Frame = -2
Query: 1074 ENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAI-NGVEVS-----TIRLVGR-MLG 916
+ S R +TL T K D A G+R AI NG S I +VGR LG
Sbjct: 124 QEKAASSTRQLETLFSATGKSVDDFADALGNRLVNAIKNGTASSRQLEQAIEIVGREALG 183
Query: 915 K---VERVTDVVFTLDDGTG----KIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQ 757
+ ++ + ++DDG + D+N+ EA +A E V+GG+
Sbjct: 184 AEADIGKLQQALRSVDDGNSIQNIRNDLNQLSQEAEEASESVKGLGVELENVLGGIVAGG 243
Query: 756 GKRHVVAYAV 727
G + V+ A+
Sbjct: 244 GIQEVIGQAL 253
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,444,252,043
Number of Sequences: 3454138
Number of extensions: 49793609
Number of successful extensions: 116375
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 110767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116195
length of database: 1,185,965,366
effective HSP length: 133
effective length of database: 726,565,012
effective search space used: 215063243552
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)