BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419390.2.1
(1603 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB71836.1| replication protein A1 [Oryza sativa] 652 0.0
dbj|BAC77529.1| replication protein A 70b [Oryza sativa (ja... 650 0.0
ref|NP_196419.1| DNA binding / nucleic acid binding [Arabid... 506 e-141
ref|NP_200908.1| DNA binding / nucleic acid binding [Arabid... 498 e-139
dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana] 337 1e-90
ref|NP_178690.1| DNA binding / nucleic acid binding [Arabid... 214 1e-53
ref|NP_973433.1| DNA binding / nucleic acid binding [Arabid... 214 1e-53
gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus ... 213 2e-53
emb|CAG59321.1| unnamed protein product [Candida glabrata C... 209 3e-52
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum] 208 5e-52
gb|AAU05383.1| replication protein A 70 kDa subunit [Ustila... 202 2e-50
ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago m... 202 2e-50
ref|NP_199353.1| DNA binding / nucleic acid binding [Arabid... 202 4e-50
ref|XP_507007.1| PREDICTED OSJNBb0013K01.36 gene product [O... 200 1e-49
gb|AAW42928.1| damaged DNA binding protein, putative [Crypt... 199 3e-49
gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]... 199 3e-49
gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [S... 199 4e-49
dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo... 199 4e-49
emb|CAH92206.1| hypothetical protein [Pongo pygmaeus] >gi|7... 198 5e-49
gb|AAU44205.1| unknown protein [Oryza sativa (japonica cult... 197 8e-49
dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa (... 196 2e-48
emb|CAD21282.1| probable single-stranded DNA-binding protei... 196 2e-48
ref|XP_581025.2| PREDICTED: similar to Replication protein ... 194 7e-48
dbj|BAE39655.1| unnamed protein product [Mus musculus] >gi|... 194 9e-48
gb|AAH19119.1| Replication protein A1 [Mus musculus] >gi|56... 194 9e-48
dbj|BAE31105.1| unnamed protein product [Mus musculus] 194 9e-48
ref|XP_868491.1| PREDICTED: similar to Replication protein ... 193 2e-47
ref|XP_868487.1| PREDICTED: similar to Replication protein ... 193 2e-47
ref|XP_451388.1| unnamed protein product [Kluyveromyces lac... 193 2e-47
ref|XP_548316.2| PREDICTED: similar to Replication protein ... 193 2e-47
emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis... 192 3e-47
gb|AAH70559.1| LOC397937 protein [Xenopus laevis] 192 3e-47
emb|CAA22533.1| ssb1 [Schizosaccharomyces pombe] >gi|191118... 191 6e-47
ref|NP_001016043.1| replication protein A1, 70kDa [Xenopus ... 191 8e-47
ref|XP_719663.1| hypothetical protein CaO19_9640 [Candida a... 189 2e-46
emb|CAG32101.1| hypothetical protein [Gallus gallus] >gi|57... 189 3e-46
gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895] >gi|45... 189 4e-46
emb|CAB78915.1| replication A protein-like [Arabidopsis tha... 187 8e-46
ref|XP_749761.1| replication protein A 70 kDa DNA-binding s... 186 2e-45
ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella... 184 9e-45
ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus... 181 8e-44
ref|XP_503990.1| hypothetical protein [Yarrowia lipolytica]... 178 5e-43
ref|NP_567576.1| DNA binding / nucleic acid binding [Arabid... 176 2e-42
dbj|BAD69789.1| Replication protein A large subunit [Bombyx... 176 3e-42
emb|CAG08885.1| unnamed protein product [Tetraodon nigrovir... 176 3e-42
gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium ... 175 6e-42
gb|AAT68105.1| replication protein A 70kd subunit [Danio re... 174 7e-42
dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae] 174 1e-41
emb|CAA94241.1| replication protein A [Drosophila melanogas... 173 2e-41
emb|CAG84575.1| unnamed protein product [Debaryomyces hanse... 172 5e-41
ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Enceph... 168 7e-40
gb|EAL27901.1| GA21928-PA [Drosophila pseudoobscura] 166 3e-39
gb|EAA01767.2| ENSANGP00000015823 [Anopheles gambiae str. P... 165 4e-39
emb|CAA80682.1| replication protein A 51 kilodalton subunit... 157 2e-36
gb|AAR84278.1| putative replication protein A subunit 1 [Le... 156 2e-36
emb|CAJ05550.1| replication factor A, 51kDa subunit, putati... 156 3e-36
gb|AAK84867.1| replication protein A subunit 1 [Leishmania ... 153 2e-35
ref|XP_786722.1| PREDICTED: similar to replication protein ... 151 9e-35
ref|XP_819019.1| replication factor A, 51kDa subunit [Trypa... 146 2e-33
ref|XP_828978.1| replication factor A 51kDa subunit [Trypan... 145 6e-33
gb|AAB63407.1| Hypothetical protein F18A1.5 [Caenorhabditis... 142 5e-32
ref|XP_680439.1| replication factor a protein [Plasmodium b... 137 1e-30
ref|XP_724343.1| replication A protein [Plasmodium yoelii y... 137 2e-30
ref|XP_702119.1| PREDICTED: hypothetical protein XP_697027 ... 136 2e-30
dbj|BAE02429.1| unnamed protein product [Macaca fascicularis] 136 3e-30
emb|CAI74881.1| replication factor-a protein 1, putative [T... 135 6e-30
emb|CAB62873.1| replication factor a protein, putative [Pla... 133 2e-29
pdb|1FGU|B Chain B, Ssdna-Binding Domain Of The Large Subun... 131 7e-29
pdb|1JMC|A Chain A, Single Stranded Dna-Binding Domain Of H... 131 7e-29
emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae] >... 129 5e-28
ref|XP_764664.1| replication factor A protein [Theileria pa... 126 2e-27
gb|AAP92635.1| Cb1-727 [Rattus norvegicus] >gi|62656540|ref... 121 1e-25
ref|XP_667409.1| replication protein A large subunit [Crypt... 120 1e-25
gb|AAD42062.1| replication protein A large subunit [Cryptos... 120 2e-25
ref|XP_626789.1| replication protein A1 large subunit [Cryp... 120 2e-25
ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium pa... 117 2e-24
ref|XP_666551.1| replication protein A 70kDa [Cryptosporidi... 117 2e-24
gb|AAW71479.1| replication protein A large subunit [Cryptos... 115 7e-24
emb|CAG08930.1| unnamed protein product [Tetraodon nigrovir... 103 2e-20
ref|XP_765009.1| replication factor A protein [Theileria pa... 102 4e-20
gb|EAR92088.1| hypothetical protein TTHERM_00106890 [Tetrah... 101 1e-19
emb|CAI74544.1| replication factor A-related protein, putat... 93 3e-17
ref|XP_636195.1| hypothetical protein DDB0188462 [Dictyoste... 88 1e-15
ref|XP_792076.1| PREDICTED: similar to replication protein ... 86 3e-15
ref|XP_511254.1| PREDICTED: replication protein A1, 70kDa [... 85 1e-14
ref|XP_650233.1| replication factor A protein 1 [Entamoeba ... 82 5e-14
ref|XP_725495.1| replication protein A large subunit [Plasm... 82 8e-14
ref|XP_680462.1| replication factor A-related protein [Plas... 81 1e-13
ref|XP_745376.1| replication factor A-related protein [Plas... 79 4e-13
gb|AAH44372.1| Replication protein A1 [Danio rerio] >gi|410... 79 7e-13
pdb|1L1O|F Chain F, Structure Of The Human Replication Prot... 78 1e-12
dbj|BAD87135.1| DNA binding protein-like [Oryza sativa (jap... 77 2e-12
ref|NP_914252.1| P0401G10.31 [Oryza sativa (japonica cultiv... 77 3e-12
ref|NP_919093.1| DNA binding protein-like [Oryza sativa (ja... 76 4e-12
emb|CAD51733.1| replication factor A-related protein, putat... 75 1e-11
ref|XP_740979.1| hypothetical protein PC000124.04.0 [Plasmo... 75 1e-11
gb|ABA94881.1| hypothetical protein LOC_Os11g40920 [Oryza s... 74 2e-11
emb|CAG08929.1| unnamed protein product [Tetraodon nigrovir... 74 2e-11
ref|NP_178764.1| unknown protein [Arabidopsis thaliana] >gi... 73 3e-11
ref|NP_174826.1| unknown protein [Arabidopsis thaliana] >gi... 73 3e-11
gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza s... 72 7e-11
ref|XP_476960.1| DNA binding protein-like [Oryza sativa (ja... 72 9e-11
ref|NP_175703.1| unknown protein [Arabidopsis thaliana] >gi... 70 3e-10
ref|NP_568511.1| unknown protein [Arabidopsis thaliana] 69 4e-10
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza s... 69 7e-10
dbj|BAD81690.1| helicase-like protein [Oryza sativa (japoni... 69 7e-10
dbj|BAB11360.1| replication protein A1-like protein [Arabid... 67 2e-09
dbj|BAB10788.1| replication protein A1-like [Arabidopsis th... 67 2e-09
ref|NP_198346.1| unknown protein [Arabidopsis thaliana] 67 2e-09
gb|ABA96519.1| hypothetical protein LOC_Os12g06230 [Oryza s... 67 2e-09
ref|NP_189742.1| unknown protein [Arabidopsis thaliana] 67 3e-09
gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza s... 66 4e-09
gb|AAV44036.1| hypothetical protein [Oryza sativa (japonica... 66 4e-09
ref|XP_739325.1| replication factor a protein [Plasmodium c... 66 4e-09
gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza s... 66 4e-09
gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza s... 66 4e-09
dbj|BAB02796.1| replication protein A1-like [Arabidopsis th... 65 6e-09
dbj|BAD87333.1| DNA binding protein-like [Oryza sativa (jap... 64 1e-08
ref|NP_198524.1| unknown protein [Arabidopsis thaliana] 63 3e-08
ref|NP_179052.2| unknown protein [Arabidopsis thaliana] 60 2e-07
ref|XP_470551.1| Putative helicase [Oryza sativa (japonica ... 59 4e-07
ref|NP_187935.1| unknown protein [Arabidopsis thaliana] 58 1e-06
gb|AAM15454.1| putative replication protein A1 [Arabidopsis... 57 3e-06
ref|NP_178584.2| unknown protein [Arabidopsis thaliana] 57 3e-06
emb|CAB49209.1| RPA41 subunit of the hetero-oligomeric comp... 55 1e-05
gb|ABA98117.1| hypothetical protein LOC_Os12g26850 [Oryza s... 55 1e-05
ref|NP_567321.1| unknown protein [Arabidopsis thaliana] >gi... 54 1e-05
ref|XP_472095.1| OSJNBa0061G20.6 [Oryza sativa (japonica cu... 54 2e-05
dbj|BAA31015.1| 361aa long hypothetical protein [Pyrococcus... 52 9e-05
ref|NP_189676.1| unknown protein [Arabidopsis thaliana] 50 2e-04
ref|NP_178646.1| unknown protein [Arabidopsis thaliana] >gi... 50 2e-04
ref|XP_466062.1| replication protein-like [Oryza sativa (ja... 49 5e-04
ref|XP_470467.1| expressed protein, with alternative splici... 49 8e-04
ref|XP_470466.1| expressed protein, with alternative splici... 49 8e-04
gb|AAS01985.2| expressed protein, with alternative splicing... 49 8e-04
ref|NP_189797.1| unknown protein [Arabidopsis thaliana] >gi... 48 0.001
gb|EAS00303.1| hypothetical protein TTHERM_00218760 [Tetrah... 48 0.001
ref|XP_213231.3| PREDICTED: similar to 60S ribosomal protei... 48 0.001
ref|NP_913628.1| B1008C01.13 [Oryza sativa (japonica cultiv... 47 0.002
ref|NP_922202.1| putative replication protein [Oryza sativa... 47 0.002
gb|AAG00002.2| Hypothetical protein R03H10.6 [Caenorhabditi... 47 0.002
gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza s... 47 0.002
dbj|BAB01022.1| replication protein A1-like [Arabidopsis th... 46 0.005
ref|XP_789630.1| PREDICTED: similar to Replication protein ... 45 0.007
ref|NP_198305.1| unknown protein [Arabidopsis thaliana] 45 0.009
ref|NP_918352.1| replication protein-like [Oryza sativa (ja... 44 0.015
ref|XP_471182.1| OSJNBa0095H06.12 [Oryza sativa (japonica c... 44 0.019
ref|XP_477680.1| replication protein-like [Oryza sativa (ja... 44 0.019
ref|XP_778757.1| hypothetical protein GLP_82_33470_32019 [G... 44 0.019
dbj|BAB30034.1| unnamed protein product [Mus musculus] >gi|... 43 0.033
ref|XP_731701.1| hypothetical protein PC300559.00.0 [Plasmo... 43 0.043
ref|XP_656777.1| replication factor A-related protein [Enta... 42 0.056
ref|NP_189826.1| unknown protein [Arabidopsis thaliana] >gi... 42 0.096
dbj|BAD45339.1| hypothetical protein [Oryza sativa (japonic... 41 0.13
gb|AAL82144.1| replication factor A related protein [Pyroco... 41 0.16
ref|XP_473791.1| OSJNBb0015N08.3 [Oryza sativa (japonica cu... 41 0.16
dbj|BAB47563.1| RPA41 [Pyrococcus furiosus] 41 0.16
ref|XP_466063.1| replication protein-like [Oryza sativa (ja... 40 0.21
ref|XP_481696.1| DNA binding protein-like [Oryza sativa (ja... 40 0.37
gb|AAT43258.1| replication factor A, large subunit [Picroph... 40 0.37
gb|EAS06917.1| hypothetical protein TTHERM_00726370 [Tetrah... 39 0.48
ref|NP_918821.1| helicase-like protein [Oryza sativa (japon... 39 0.48
gb|AAH29829.1| Hypothetical protein MGC35212 [Homo sapiens]... 39 0.62
ref|NP_920307.1| putative DNA binding protein [Oryza sativa... 39 0.82
ref|XP_875913.1| PREDICTED: hypothetical protein XP_870820 ... 38 1.1
ref|YP_437293.1| DNA-directed RNA polymerase, beta' subunit... 38 1.4
gb|ABB37948.1| heat shock protein HtpG [Desulfovibrio desul... 38 1.4
ref|NP_917821.1| OSJNBb0035I14.14 [Oryza sativa (japonica c... 37 1.8
ref|NP_850112.1| unknown protein [Arabidopsis thaliana] >gi... 37 2.4
gb|AAU44445.1| hypothetical protein AT2G05642 [Arabidopsis ... 37 2.4
ref|XP_414840.1| PREDICTED: similar to hypothetical protein... 37 2.4
ref|NP_914915.1| P0506E04.19 [Oryza sativa (japonica cultiv... 37 2.4
ref|ZP_00411872.1| Fibronectin, type III [Arthrobacter sp. ... 37 2.4
ref|NP_198375.1| unknown protein [Arabidopsis thaliana] 37 3.1
gb|ABA98395.1| hypothetical protein LOC_Os12g27380 [Oryza s... 36 4.0
gb|AAM37051.1| hemolysin-type calcium binding protein [Xant... 36 4.0
gb|AAB85861.1| replication factor A related protein [Methan... 36 5.3
ref|XP_421389.1| PREDICTED: similar to kinesin light chain ... 36 5.3
ref|ZP_00883990.1| conserved hypothetical protein [Shewanel... 36 5.3
gb|AAR19789.1| BSU1 Ser/Thr phosphatase [Arabidopsis thalia... 35 9.0
ref|XP_759715.1| hypothetical protein UM03568.1 [Ustilago m... 35 9.0
gb|AAF86539.1| F21B7.7 [Arabidopsis thaliana] 35 9.0
emb|CAE68440.1| Hypothetical protein CBG14225 [Caenorhabdit... 35 9.0
ref|NP_171844.3| BSU1; hydrolase/ protein serine/threonine ... 35 9.0
>gb|AAB71836.1| replication protein A1 [Oryza sativa]
Length = 630
Score = 652 bits (1682), Expect = 0.0
Identities = 312/376 (82%), Positives = 351/376 (93%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SKGSLR+ANKQFKTV NDYE++LNENA+VEEAEGETF+P +QYN VKIDQLGPY
Sbjct: 255 GKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEAEGETFIPQIQYNFVKIDQLGPY 314
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
VGGRELVD++GVVQSVSPTLSVRRKIDNETIPKRDIVVADDS KTVTISLWNDLATTTGQ
Sbjct: 315 VGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQ 374
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
ELLDMVDS+P++AIKSLKVSDFQG+SLST+GRST+ +NPDLPEA+ L++WYDSEGK TS+
Sbjct: 375 ELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSM 434
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
A I +++GA+R GG +SMYSDRVFLSHITSDP +GQ+KPVFFSL A IS IKPDQ MWYR
Sbjct: 435 ASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYR 494
Query: 871 ACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
AC TCNKKVTEA GSGYWCEGCQKND+ECSLRYIMVIK+SDPTGEAW+S+FN+ AE+I+G
Sbjct: 495 ACKTCNKKVTEAMGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVG 554
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
CSADELDRIRKEEGDDSY+LKLKEATWVPHLFRVSVTQ+EYMNEKRQRITVR EAPVD A
Sbjct: 555 CSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHA 614
Query: 511 AESKYLLEEIAKLTAC 464
AE+KY+LEEIAKLT C
Sbjct: 615 AEAKYMLEEIAKLTGC 630
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa (japonica cultivar-group)]
Length = 630
Score = 650 bits (1676), Expect = 0.0
Identities = 311/376 (82%), Positives = 351/376 (93%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SKGSLR+A+KQFKTV NDYE++LNENA+VEEAEGETF+P +QYN VKIDQLGPY
Sbjct: 255 GKVYYISKGSLRVADKQFKTVHNDYEMTLNENAVVEEAEGETFIPQIQYNFVKIDQLGPY 314
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
VGGRELVD++GVVQSVSPTLSVRRKIDNETIPKRDIVVADDS KTVTISLWNDLATTTGQ
Sbjct: 315 VGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQ 374
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
ELLDMVDS+P++AIKSLKVSDFQG+SLST+GRST+ +NPDLPEA+ L++WYDSEGK TS+
Sbjct: 375 ELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVLNPDLPEAEQLRAWYDSEGKGTSM 434
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
A I +++GA+R GG +SMYSDRVFLSHITSDP +GQ+KPVFFSL A IS IKPDQ MWYR
Sbjct: 435 ASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYR 494
Query: 871 ACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
AC TCNKKVTEA GSGYWCEGCQKND+ECSLRYIMVIK+SDPTGEAW+S+FN+ AE+I+G
Sbjct: 495 ACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVG 554
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
CSADELDRIRKEEGDDSY+LKLKEATWVPHLFRVSVTQ+EYMNEKRQRITVR EAPVD A
Sbjct: 555 CSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHA 614
Query: 511 AESKYLLEEIAKLTAC 464
AE+KY+LEEIAKLT C
Sbjct: 615 AEAKYMLEEIAKLTGC 630
>ref|NP_196419.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
emb|CAB62614.1| replication factor A-like protein [Arabidopsis thaliana]
Length = 604
Score = 506 bits (1302), Expect = e-141
Identities = 243/374 (64%), Positives = 305/374 (81%), Gaps = 2/374 (0%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E F P ++N V ID+LG
Sbjct: 226 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGT 285
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
YV ++L+D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT G
Sbjct: 286 YVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIG 345
Query: 1234 QELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTS 1055
QELLDM D+ PV+AIKSLKV FQGVSLSTI RS + INP+ PEA LKSWYD+EGK+TS
Sbjct: 346 QELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETS 405
Query: 1054 LAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWY 875
++ I + + ++ G +SMYSDRVFLSHITS+P++G+EKPVFFS A IS IKPDQ MWY
Sbjct: 406 MSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWY 465
Query: 874 RACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
RAC TCNKKVTEA SGYWCE CQK D ECSLRYIM +K+SD TGE W+S FN+ AEKII
Sbjct: 466 RACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDEAEKII 525
Query: 694 GCSADELDRIRKEEGD-DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
GC+AD+L+ ++ EEG+ + + KLKEATW HLFR+SV+Q EY +EKRQRITVRG +P+D
Sbjct: 526 GCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVSPID 585
Query: 517 FAAESKYLLEEIAK 476
FAAE++ LL++I+K
Sbjct: 586 FAAETRLLLQDISK 599
>ref|NP_200908.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAO41995.1| putative RNA helicase [Arabidopsis thaliana]
Length = 629
Score = 498 bits (1282), Expect = e-139
Identities = 238/373 (63%), Positives = 304/373 (81%), Gaps = 2/373 (0%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E F+P ++N V I++LG
Sbjct: 250 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGL 309
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
YV +EL+D++GVVQSVSPT+S+RR+ DNE IPKRDI +AD+S KTV +SLWNDLAT G
Sbjct: 310 YVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIG 369
Query: 1234 QELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTS 1055
QELLDM D SPV+AIKSLKV DFQGVSLSTI RS + INP+ PEAK LKSW+DSEGK+ S
Sbjct: 370 QELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEIS 429
Query: 1054 LAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWY 875
++ I + + + G +S+Y+DRV LSHITS+P++ +EKPVFFS A IS IKPDQ MWY
Sbjct: 430 MSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWY 489
Query: 874 RACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
+AC TCNKKVTEA SGYWCEGCQ+ ECSLRYIM +K++D +GE W+S FN+ AEKI+
Sbjct: 490 QACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKIL 549
Query: 694 GCSADELDRIRKEEGD-DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
GCSADEL++++ EEG+ + Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+D
Sbjct: 550 GCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLD 609
Query: 517 FAAESKYLLEEIA 479
FAAE++ LL++I+
Sbjct: 610 FAAETRLLLQDIS 622
>dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
Length = 253
Score = 337 bits (863), Expect = 1e-90
Identities = 158/246 (64%), Positives = 200/246 (81%), Gaps = 1/246 (0%)
Frame = -1
Query: 1213 DSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
D SPV+AIKSLKV DFQGVSLSTI RS + INP+ PEAK LKSW+DSEGK+ S++ I +
Sbjct: 1 DQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSG 60
Query: 1033 VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCN 854
+ + G +S+Y+DRV LSHITS+P++ +EKPVFFS A IS IKPDQ MWY+AC TCN
Sbjct: 61 MSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQACKTCN 120
Query: 853 KKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADEL 674
KKVTEA SGYWCEGCQ+ ECSLRYIM +K++D +GE W+S FN+ AEKI+GCSADEL
Sbjct: 121 KKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADEL 180
Query: 673 DRIRKEEGD-DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKY 497
++++ EEG+ + Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++
Sbjct: 181 NKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRL 240
Query: 496 LLEEIA 479
LL++I+
Sbjct: 241 LLQDIS 246
>ref|NP_178690.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana]
gb|AAO64881.1| At2g06510 [Arabidopsis thaliana]
dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 640
Score = 214 bits (544), Expect = 1e-53
Identities = 130/382 (34%), Positives = 218/382 (57%), Gaps = 10/382 (2%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ +SKGSL+ A K F +KN++E+ L + VE E +P Q++ I +
Sbjct: 266 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDI-E 324
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
++D++GVV SV+P++ + RK ET +R + + D+SGK V ++LW + G
Sbjct: 325 NAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEFCNRDG 383
Query: 1234 QELLDMVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKD 1061
++L +MVDS+ PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKD
Sbjct: 384 RQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKD 443
Query: 1060 TSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
T+ IS + T GG S R +S I + +KP + ++ A IS IK D +
Sbjct: 444 TASFSISRD---TMPGGV-SRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTD-SF 498
Query: 880 WYRAC------TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
Y AC CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F
Sbjct: 499 CYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAF 558
Query: 718 NEHAEKIIGCSADELDRIRKE-EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRIT 542
E E+I+GC A +L ++ E E ++ + +++ + ++ ++ + + Y +E+R ++T
Sbjct: 559 QETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMT 618
Query: 541 VRGEAPVDFAAESKYLLEEIAK 476
V V++ +ESKY+L+ + +
Sbjct: 619 VVKVDKVNYTSESKYMLDLLVR 640
>ref|NP_973433.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
Length = 617
Score = 214 bits (544), Expect = 1e-53
Identities = 130/382 (34%), Positives = 218/382 (57%), Gaps = 10/382 (2%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ +SKGSL+ A K F +KN++E+ L + VE E +P Q++ I +
Sbjct: 243 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDI-E 301
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
++D++GVV SV+P++ + RK ET +R + + D+SGK V ++LW + G
Sbjct: 302 NAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEFCNRDG 360
Query: 1234 QELLDMVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKD 1061
++L +MVDS+ PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKD
Sbjct: 361 RQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKD 420
Query: 1060 TSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
T+ IS + T GG S R +S I + +KP + ++ A IS IK D +
Sbjct: 421 TASFSISRD---TMPGGV-SRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTD-SF 475
Query: 880 WYRAC------TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
Y AC CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F
Sbjct: 476 CYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAF 535
Query: 718 NEHAEKIIGCSADELDRIRKE-EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRIT 542
E E+I+GC A +L ++ E E ++ + +++ + ++ ++ + + Y +E+R ++T
Sbjct: 536 QETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMT 595
Query: 541 VRGEAPVDFAAESKYLLEEIAK 476
V V++ +ESKY+L+ + +
Sbjct: 596 VVKVDKVNYTSESKYMLDLLVR 617
>gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 213 bits (541), Expect = 2e-53
Identities = 130/376 (34%), Positives = 207/376 (55%), Gaps = 7/376 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
VS+ + IA KQF V N+YE+ + +E E+ +P V+YN I LG + +
Sbjct: 246 VSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES-VPQVKYNFKGIGDLGE-LQKDD 303
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
+ D++GVV+ V SV + N+ KR++ + D SG++V ++LW A T
Sbjct: 304 VCDVIGVVREVGELGSVTSRATNKPFAKRELQLVDQSGQSVRLTLWGKQAETF------Q 357
Query: 1216 VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL-APIS 1040
D PV+A K +KV DF G SLS +T+ INPD+PEA +L+ W+D+EG + A +
Sbjct: 358 ADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHFTAYTT 417
Query: 1039 AEVGATR---AGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRA 869
A VG + A G + ++ ++ + + EK FFS A ++ IK D Y A
Sbjct: 418 ASVGDSAINTAAGAATRPAELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKDP-FSYPA 476
Query: 868 CTT---CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
C C KKV E GSG+WCE CQ+ E RYI+ + + D TG+ W++ FNE AE+I
Sbjct: 477 CANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNETAEQI 535
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
+G SA++L +++ E D Y + +AT ++F++ Q + ++ R R R AP D
Sbjct: 536 MGISANDLMKLKNEGNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRKVAPPD 595
Query: 517 FAAESKYLLEEIAKLT 470
+ A+S +L + I++++
Sbjct: 596 YVADSAHLSQMISQMS 611
>emb|CAG59321.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_446394.1| unnamed protein product [Candida glabrata]
Length = 627
Score = 209 bits (532), Expect = 3e-52
Identities = 126/378 (33%), Positives = 200/378 (52%), Gaps = 5/378 (1%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ VSK L+ A QF + + YEL+L+ ++EE+ E +P +N +K+D +
Sbjct: 258 GKVYYVSKARLQPAKPQFTNLSHPYELNLDRETVIEESFDENNVPKTHFNFIKLDNIQSQ 317
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
VD++G++Q+V+P + + + +RDI + DDSG +++ LWN Q
Sbjct: 318 ENNSN-VDVLGIIQTVNPHFELTSRAGKK-FDRRDIQIVDDSGFAISVGLWN-------Q 368
Query: 1231 ELLDM-VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTS 1055
+ LD + VVAIK ++VSDF G SLS STL NP++PEA LK WYD +GKD
Sbjct: 369 QALDFNLPEGSVVAIKGVRVSDFGGKSLSMGFNSTLIANPEIPEAYKLKGWYDQQGKDQD 428
Query: 1054 LAPISAEVGA--TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
+ + GA T A S R+ ++ ++ E+ FFS+ A IS +K D N
Sbjct: 429 FTSLKQDAGAGTTSAANLAKFISQRITIARAEAENLGKNERGDFFSVKAAISFMKVD-NF 487
Query: 880 WYRACT--TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHA 707
Y AC+ CNKKV E + CE C N+ RYI+ I + D TG W+++F++ A
Sbjct: 488 AYPACSNENCNKKVIEQPDGTWRCEKCDINNPSPRWRYILTISIIDETGNLWLTLFDDQA 547
Query: 706 EKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEA 527
++++G A+ L + KE D + + + FR+ + Y ++ R R TV
Sbjct: 548 KQLLGVDANTLMSL-KENDPDEFTRTTQNVQMNQYDFRIRAREDNYNDQTRIRYTVANLH 606
Query: 526 PVDFAAESKYLLEEIAKL 473
++F AE+ YL +E+ K+
Sbjct: 607 KLNFKAEADYLADELTKV 624
>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
Length = 637
Score = 208 bits (530), Expect = 5e-52
Identities = 128/382 (33%), Positives = 220/382 (57%), Gaps = 10/382 (2%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ +SKG+L+ A K F +KN++E+ L+ N+ VE E P Q++ I +
Sbjct: 260 GKVYLISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFRPISDI-E 318
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
V ++D++GVV SV+P++ + RK ET+ +R + + D+SG++V ++LW + G
Sbjct: 319 NVESNAILDVIGVVTSVNPSVPILRKNGMETL-RRILNLKDNSGRSVELTLWGEFCNREG 377
Query: 1234 QELLDMVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKD 1061
Q+L +MVD+ P++A+K+ KV++F G S+ +I + L INPD PEA++L++W+D GKD
Sbjct: 378 QKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKD 437
Query: 1060 TSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
++ IS ++ GG K+ R +S I + +KP + ++ A IS +K D
Sbjct: 438 SASLSISKDI---THGGPKNEI--RKTVSQIRDEGLGRSDKPDWITIRATISFMKTD-TF 491
Query: 880 WYRACTT------CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
Y AC CNKKVT + + + C+ C + EC RY++ ++ D TG WV+ F
Sbjct: 492 CYTACPLMIGDRQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAF 551
Query: 718 NEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPH-LFRVSVTQHEYMNEKRQRIT 542
E E+I+G A EL ++ E+ DD + ++ H +FR+ + + Y E++ + T
Sbjct: 552 QEGGEEIMGYPAKELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKST 611
Query: 541 VRGEAPVDFAAESKYLLEEIAK 476
V V+++AES+Y+L+ I+K
Sbjct: 612 VVKADKVNYSAESRYMLDLISK 633
>gb|AAU05383.1| replication protein A 70 kDa subunit [Ustilago maydis]
Length = 623
Score = 202 bits (515), Expect = 2e-50
Identities = 118/370 (31%), Positives = 193/370 (52%), Gaps = 5/370 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+SK + IA KQF ++N+YE++ + +EE T +P V+Y V+I++L V +
Sbjct: 255 ISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATDVPEVKYEFVRINELES-VEANQ 313
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
D++G++ S + K + KR++ + D ++V ++LW A T
Sbjct: 314 TCDVIGILDSYGELSEIVSKASQRPVQKRELTLVDQGNRSVKLTLWGKTAETFPTNA--G 371
Query: 1216 VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS- 1040
VD PV+A K +KV DF G SLS ST+ INPD+ E+ L+ WYD++G P +
Sbjct: 372 VDEKPVLAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRGWYDNDGAHAQFQPYTN 431
Query: 1039 --AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
GA GG + ++R + + + EKP +F++ A + +IK +N++Y AC
Sbjct: 432 GGVGGGAMGGGGAGANMAERRTIVQVKDENLGMSEKPDYFNVRATVVYIK-QENLYYTAC 490
Query: 865 TT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
+ CNKKV + + CE C ++ + RYI+ ++D TG+ W+S FNE A ++IG
Sbjct: 491 ASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQMWLSGFNEDATQLIG 550
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
SA EL ++R EE + + L A ++F + + R R T+ APVDFA
Sbjct: 551 MSAGELHKLR-EESESEFSAALHRAANRMYMFNCRAKMDTFNDTARVRYTISRAAPVDFA 609
Query: 511 AESKYLLEEI 482
L++ I
Sbjct: 610 KAGMELVDAI 619
>ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
gb|EAK83030.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
Length = 623
Score = 202 bits (515), Expect = 2e-50
Identities = 118/370 (31%), Positives = 193/370 (52%), Gaps = 5/370 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+SK + IA KQF ++N+YE++ + +EE T +P V+Y V+I++L V +
Sbjct: 255 ISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATDVPEVKYEFVRINELES-VEANQ 313
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
D++G++ S + K + KR++ + D ++V ++LW A T
Sbjct: 314 TCDVIGILDSYGELSEIVSKASQRPVQKRELTLVDQGNRSVKLTLWGKTAETFPTNA--G 371
Query: 1216 VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS- 1040
VD PV+A K +KV DF G SLS ST+ INPD+ E+ L+ WYD++G P +
Sbjct: 372 VDEKPVLAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRGWYDNDGAHAQFQPYTN 431
Query: 1039 --AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
GA GG + ++R + + + EKP +F++ A + +IK +N++Y AC
Sbjct: 432 GGVGGGAMGGGGAGANMAERRTIVQVKDENLGMSEKPDYFNVRATVVYIK-QENLYYTAC 490
Query: 865 TT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
+ CNKKV + + CE C ++ + RYI+ ++D TG+ W+S FNE A ++IG
Sbjct: 491 ASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQMWLSGFNEDATQLIG 550
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
SA EL ++R EE + + L A ++F + + R R T+ APVDFA
Sbjct: 551 MSAGELHKLR-EESESEFSAALHRAANRMYMFNCRAKMDTFNDTARVRYTISRAAPVDFA 609
Query: 511 AESKYLLEEI 482
L++ I
Sbjct: 610 KAGMELVDAI 619
>ref|NP_199353.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
dbj|BAB09168.1| replication protein A1-like [Arabidopsis thaliana]
Length = 853
Score = 202 bits (513), Expect = 4e-50
Identities = 117/378 (30%), Positives = 204/378 (53%), Gaps = 10/378 (2%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+S+G+L+ A K F + NDYE+ L+ + ++ E + +P ++ I + +
Sbjct: 373 ISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCEDDGTIPRYHFHFRNIGDI-ENMENNS 431
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
D++G+V S+SPT+++ RK E + KR + + D SG++V +++W + GQ+L ++
Sbjct: 432 TTDVIGIVSSISPTVAIMRKNLTE-VQKRSLQLKDMSGRSVEVTMWGNFCNAEGQKLQNL 490
Query: 1216 VDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
DS PV+A+K+ ++ +F G +STIG S I PD PEA+ L+ WY+ EG++ I
Sbjct: 491 CDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREGRNAHFTSI 550
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
S E R ++ I + EKP + ++ A IS +K + N Y AC
Sbjct: 551 SREFSGV------GRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVE-NFCYTACP 603
Query: 862 T------CNKKVTEAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAE 704
C+KKVT G G W CE C K EC RYI+ I+L D T W + F E E
Sbjct: 604 IMNGDRPCSKKVTNN-GDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGE 662
Query: 703 KIIGCSADELDRIRKEEGD-DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEA 527
+I+G SA +L ++ E D + + ++ + ++F++ + + Y +E+R + TV
Sbjct: 663 EIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAE 722
Query: 526 PVDFAAESKYLLEEIAKL 473
+++++ ++++LE I KL
Sbjct: 723 KLNYSSNTRFMLEAIDKL 740
>ref|XP_507007.1| PREDICTED OSJNBb0013K01.36 gene product [Oryza sativa (japonica
cultivar-group)]
ref|XP_468069.1| replication protein A 70kDa [Oryza sativa (japonica cultivar-group)]
dbj|BAD17384.1| replication protein A 70kDa [Oryza sativa (japonica cultivar-group)]
dbj|BAD16963.1| replication protein A 70kDa [Oryza sativa (japonica cultivar-group)]
Length = 656
Score = 200 bits (509), Expect = 1e-49
Identities = 124/382 (32%), Positives = 214/382 (56%), Gaps = 12/382 (3%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGE-TFLPPVQYNLVKIDQLGPYVGGR 1400
VS+G+LR A K + + N++E+ L + V+ E + +P +++ I+++
Sbjct: 285 VSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIED-AQNN 343
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
++DI+GVV SV+P +++RK ET KR + + D SG++V +++W D G +L
Sbjct: 344 AILDIIGVVTSVNPCTTIQRKNGMET-QKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQG 402
Query: 1219 MVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
MV+ PV+A+K+ KVSDF G S+ TI + L INPD EA +L+ W+DS G+D S
Sbjct: 403 MVERGIFPVLAVKAGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQS 462
Query: 1045 ISAEV--GATRAGGFKSMYSDRVFLSHITSDPAMGQ-EKPVFFSLYAIISHIKPDQNMWY 875
IS ++ GA+R K++ + D +G +KP + ++ A + K +++ +Y
Sbjct: 463 ISRDITPGASRNEIRKTVAQIK--------DEGLGMGDKPDWITVKATVIFFK-NESFFY 513
Query: 874 RACTT------CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNE 713
AC CNKKVT++ + C+ C + EC RY++ ++ D +G AWV+ F E
Sbjct: 514 TACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQE 573
Query: 712 HAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRG 533
++++GCSA EL+ + KE D + + + +L R+ V + Y +E++ + T
Sbjct: 574 AGQELLGCSATELNAL-KEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVK 632
Query: 532 EAPVDFAAESKYLLEEIAKLTA 467
VD + ESK+LL+ I+K +A
Sbjct: 633 VEKVDPSGESKFLLDLISKSSA 654
>gb|AAW42928.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_570235.1| damaged DNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
Length = 597
Score = 199 bits (506), Expect = 3e-49
Identities = 126/376 (33%), Positives = 202/376 (53%), Gaps = 7/376 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
VS+ + IA KQF V N+YE+ + +E E+ +P V+YN I LG + +
Sbjct: 246 VSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES-VPQVKYNFKGIGDLGE-LQKDD 303
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
+ D++GVV+ + KR++ + D SG++V ++LW A T
Sbjct: 304 VCDVIGVVREFA---------------KRELQLVDQSGQSVRLTLWGKQAETF------Q 342
Query: 1216 VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL-APIS 1040
D PV+A K +KV DF G SLS +T+ INPD+PEA +L+ W+D+EG + A +
Sbjct: 343 ADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHFTAYTT 402
Query: 1039 AEVGATR---AGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRA 869
A VG + A G + ++ ++ + + EK FFS A ++ IK D Y A
Sbjct: 403 ASVGDSAINTAAGAATRPAELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKDP-FSYPA 461
Query: 868 CTT---CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
C C KKV E GSG+WCE CQ+ E RYI+ + + D TG+ W++ FNE AE+I
Sbjct: 462 CANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNETAEQI 520
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
+G SA++L +++ E D Y + +AT ++F++ Q + ++ R R R AP D
Sbjct: 521 MGISANDLMKLKNEGNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRKVAPPD 580
Query: 517 FAAESKYLLEEIAKLT 470
+ A+S +L + I++++
Sbjct: 581 YVADSAHLSQMISQMS 596
>gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]
ref|NP_002936.1| replication protein A1, 70kDa [Homo sapiens]
gb|AAH18126.1| Replication protein A1, 70kDa [Homo sapiens]
sp|P27694|RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (p70)
gb|AAA36584.1| replication protein A, 70-kDa subunit
Length = 616
Score = 199 bits (506), Expect = 3e-49
Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 258 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSL 316
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + + +N + KR+I + D SGK VT +LW + A D
Sbjct: 317 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA--------DKF 368
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ NPD+PEA L+ W+D+EG+ A
Sbjct: 369 DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ----ALDG 424
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ ++GG ++ L + S+ +KP +FS A + +++ +N Y+AC T
Sbjct: 425 VSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLR-KENCMYQACPT 483
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C R I+ + ++D WV+ F E AE I+G +
Sbjct: 484 QDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQN 543
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + K++ + ++ + A + +FRV V Y +E R + TV PVD+
Sbjct: 544 AAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREY 602
Query: 505 SKYLLEEIAK 476
+ L+ I +
Sbjct: 603 GRRLVMSIRR 612
>gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [Saccharomyces cerevisiae]
emb|CAA42420.1| replication factor-A protein 1 [Saccharomyces cerevisiae]
ref|NP_009404.1| Subunit of heterotrimeric Replication Factor A (RF-A), which is a
highly conserved single-stranded DNA binding protein
involved in DNA replication, repair, and recombination;
Rfa1p [Saccharomyces cerevisiae]
gb|AAB27889.1| BUF2 [Saccharomyces cerevisiae]
sp|P22336|RFA1_YEAST Replication factor-A protein 1 (RF-A) (Single-stranded DNA-binding
protein) (DNA binding protein BUF2) (Replication protein
A 69 kDa DNA-binding subunit)
gb|AAA34994.1| single stranded DNA binding protein
Length = 621
Score = 199 bits (505), Expect = 4e-49
Identities = 119/377 (31%), Positives = 205/377 (54%), Gaps = 5/377 (1%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ VSK L+ A QF + + YEL+L+ + ++EE E+ +P +N +K+D +
Sbjct: 252 GKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESNVPKTHFNFIKLDAIQNQ 311
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
VD++G++Q+++P + + + +RDI + DDSG ++++ LWN Q
Sbjct: 312 EVNSN-VDVLGIIQTINPHFELTSRAGKK-FDRRDITIVDDSGFSISVGLWN-------Q 362
Query: 1231 ELLDM-VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTS 1055
+ LD + V AIK ++V+DF G SLS STL NP++PEA LK WYDS+G++ +
Sbjct: 363 QALDFNLPEGSVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNAN 422
Query: 1054 LAPISAE--VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
+ E +G A + R+ ++ ++ EK FFS+ A IS +K D N
Sbjct: 423 FITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAISFLKVD-NF 481
Query: 880 WYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHA 707
Y AC+ CNKKV E + CE C N++ + RYI+ I + D T + W+++F++ A
Sbjct: 482 AYPACSNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWLTLFDDQA 541
Query: 706 EKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEA 527
++++G A+ L + KEE + + + + FR+ + Y ++ R R TV
Sbjct: 542 KQLLGVDANTLMSL-KEEDPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIRYTVANLH 600
Query: 526 PVDFAAESKYLLEEIAK 476
+++ AE+ YL +E++K
Sbjct: 601 SLNYRAEADYLADELSK 617
>dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo sapiens]
Length = 630
Score = 199 bits (505), Expect = 4e-49
Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 272 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSL 330
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + + +N + KR+I + D SGK VT +LW + A D
Sbjct: 331 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDASGKVVTATLWGEDA--------DKF 382
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ NPD+PEA L+ W+D+EG+ A
Sbjct: 383 DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ----ALDG 438
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ ++GG ++ L + S+ +KP +FS A + +++ +N Y+AC T
Sbjct: 439 VSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLR-KENCMYQACPT 497
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C R I+ + ++D WV+ F E AE I+G +
Sbjct: 498 QDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQN 557
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + K++ + ++ + A + +FRV V Y +E R + TV PVD+
Sbjct: 558 AAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREY 616
Query: 505 SKYLLEEIAK 476
+ L+ I +
Sbjct: 617 GRRLVMSIRR 626
>emb|CAH92206.1| hypothetical protein [Pongo pygmaeus]
sp|Q5R7Q4|RFA1_PONPY Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 616
Score = 198 bits (504), Expect = 5e-49
Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 258 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSL 316
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + + +N + KR+I + D SGK VT +LW + A D
Sbjct: 317 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA--------DKF 368
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ NPD+PEA L+ W+D+EG+ A
Sbjct: 369 DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ----ALDG 424
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ ++GG ++ L + S+ +KP +FS A + +++ +N Y+AC T
Sbjct: 425 VSISDLKSGGVGGGNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLR-KENCMYQACPT 483
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C R I+ + ++D WV+ F E AE I+G +
Sbjct: 484 QDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQN 543
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + K++ + ++ + A + +FRV V Y +E R + TV PVD+
Sbjct: 544 AAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREY 602
Query: 505 SKYLLEEIAK 476
+ L+ I +
Sbjct: 603 GRRLVMSIRR 612
>gb|AAU44205.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 951
Score = 197 bits (502), Expect = 8e-49
Identities = 134/397 (33%), Positives = 209/397 (52%), Gaps = 16/397 (4%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEE--AEGETFLPPVQYNLVKIDQLG 1418
GR +S+GSL+ A K++ T+ +DYE++L+ E ++ + +P +QYN +I +L
Sbjct: 376 GRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCSDDDNSIPRLQYNFRQISEL- 434
Query: 1417 PYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTT 1238
+ +VD++GVV SVSP+ ++ RKI ET KR I + D SG+++ ++LW +
Sbjct: 435 ENMANETIVDLLGVVTSVSPSATIMRKIGTET-RKRSIQLKDLSGRSIEVTLWGNFCDAE 493
Query: 1237 GQELLDMVDS--SPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGK 1064
GQ+L DS +P++A K +V DF G S+STIG + L INPD PE + L+ WY +EGK
Sbjct: 494 GQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQLIINPDFPEVERLRQWYMTEGK 553
Query: 1063 DTSLAPISAE---VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKP 893
+S E +G T A R ++ I + EKP + ++ A ISH+
Sbjct: 554 TAPCISLSREMLNMGRTDA---------RKTIAQIKDENLGRLEKPDWITVKAAISHV-T 603
Query: 892 DQNMWYRAC-------TTCNKKVTEAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGE 737
++ Y AC CNKK G G W C+ C ++ RY++ ++ D TG
Sbjct: 604 TESFCYPACPKLLPVGRQCNKKAINN-GDGMWHCDRCDESFQNPEYRYMLRFQIQDHTGS 662
Query: 736 AWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEAT-WVPHLFRVSVTQHEYMNE 560
+ S F+E E+I G A EL IR + DD+ ++ E W +LF++ V + Y +E
Sbjct: 663 TYASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETYNDE 722
Query: 559 KRQRITVRGEAPVDFAAESKYLLEEIAKLTAC*KTQS 449
+ + T +D + ES LL I L K QS
Sbjct: 723 QSLKCTAVKVEKLDPSKESNVLLGAIDNLLLDPKGQS 759
>dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa (japonica cultivar-group)]
Length = 654
Score = 196 bits (499), Expect = 2e-48
Identities = 122/382 (31%), Positives = 212/382 (55%), Gaps = 12/382 (3%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGE-TFLPPVQYNLVKIDQLGPYVGGR 1400
VS+G+LR A K + + N++E+ L + V+ E + +P +++ I+++
Sbjct: 283 VSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIED-AQNN 341
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
++DI+GVV SV+P +++RK ET KR + + D SG++V +++W D G +L
Sbjct: 342 AILDIIGVVTSVNPCTTIQRKNGMET-QKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQG 400
Query: 1219 MVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
MV+ PV+A+K+ KVSDF G S+ TI + INPD EA +L+ W+DS G+D
Sbjct: 401 MVERGIFPVLAVKAGKVSDFSGKSVGTISSTQFFINPDSAEAHSLRQWFDSGGRDAFTQS 460
Query: 1045 ISAEV--GATRAGGFKSMYSDRVFLSHITSDPAMGQ-EKPVFFSLYAIISHIKPDQNMWY 875
IS ++ GA+R K++ + D +G +KP + ++ A + K +++ +Y
Sbjct: 461 ISRDITPGASRNEIRKTVAQIK--------DEGLGMGDKPDWITVKATVIFFK-NESFFY 511
Query: 874 RACTT------CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNE 713
AC CNKKVT++ + C+ C + EC RY++ ++ D +G AWV+ F E
Sbjct: 512 TACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQE 571
Query: 712 HAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRG 533
++++GCSA EL+ + KE D + + + +L R+ V + Y +E++ + T
Sbjct: 572 AGQELLGCSATELNAL-KEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVK 630
Query: 532 EAPVDFAAESKYLLEEIAKLTA 467
VD + ESK+LL+ I+K +A
Sbjct: 631 VEKVDPSGESKFLLDLISKSSA 652
>emb|CAD21282.1| probable single-stranded DNA-binding protein 68k chain [Neurospora
crassa]
ref|XP_961333.1| hypothetical protein [Neurospora crassa N150]
ref|XP_322908.1| hypothetical protein [Neurospora crassa]
gb|EAA32097.1| hypothetical protein [Neurospora crassa]
Length = 610
Score = 196 bits (498), Expect = 2e-48
Identities = 125/365 (34%), Positives = 190/365 (52%), Gaps = 5/365 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
+++A KQ+ + NDYEL+ + ++E+AE +T +P V++N V I +L V VDI+
Sbjct: 253 VQLAKKQWSNLPNDYELTFERDTVIEKAEDQTSVPQVRFNFVNIQELQD-VERDATVDII 311
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V + K + KR++ + D++G +V ++W AT D+ P
Sbjct: 312 GVLKEVQEVTQIVSKTTQKPYDKRELTLVDNTGYSVRCTIWGKTATN--------FDAQP 363
Query: 1201 --VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVG 1028
+VA K KVSDF G SLS + T+ I+PD+PEA +LK WYDS G++ + A +
Sbjct: 364 ESIVAFKGTKVSDFGGRSLSLLSSGTMAIDPDIPEAHHLKGWYDSSGRNNTFATHN---N 420
Query: 1027 ATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT--CN 854
GG D +S + + E P +F+L A + IK D N Y C + CN
Sbjct: 421 MQTLGGATGRKDDAKTISQVKEENLGTNEAPDYFALKATVVFIKQD-NFAYPGCRSEGCN 479
Query: 853 KKVTEAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADE 677
+KVT+ G G W CE CQ N RYIM + ++D TG+ W+S F++ A I+G SADE
Sbjct: 480 RKVTD-MGDGTWRCEKCQINHDRPQYRYIMSVNVNDHTGQLWLSCFDDTARVIMGKSADE 538
Query: 676 LDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKY 497
L IR E + + ++A FR + ++R R V AP+D+ E
Sbjct: 539 LMEIR-ETDETRLPAEFEQANCRKLNFRCRAKMDTFGEQQRIRYQVMSVAPLDYKMEGNK 597
Query: 496 LLEEI 482
L E I
Sbjct: 598 LNELI 602
>ref|XP_581025.2| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) [Bos taurus]
Length = 599
Score = 194 bits (494), Expect = 7e-48
Identities = 130/373 (34%), Positives = 192/373 (51%), Gaps = 4/373 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E LP VQ++ I L L
Sbjct: 241 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQFDFTGIGDLESK-SKDSL 299
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ ++ + K +N + KR+I + D SGK V +LW D A D
Sbjct: 300 VDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATLWGDDA--------DKF 351
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ +L IS
Sbjct: 352 DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ--ALDGIS 409
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ ++GG ++ L + S+ +KP +FS A + +++ +N Y+AC T
Sbjct: 410 --ISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLR-KENCMYQACPT 466
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C R I+ + ++D WV+ F E AE I+G S
Sbjct: 467 QDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQS 526
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
L + KE+ + ++ + A + FR+ V Y +E R + TV PVD+
Sbjct: 527 TAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYREY 585
Query: 505 SKYLLEEIAKLTA 467
+ L+ I + A
Sbjct: 586 GRRLVMNIRRNAA 598
>dbj|BAE39655.1| unnamed protein product [Mus musculus]
dbj|BAE41250.1| unnamed protein product [Mus musculus]
Length = 621
Score = 194 bits (493), Expect = 9e-48
Identities = 130/370 (35%), Positives = 188/370 (50%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E LP VQ++ I L L
Sbjct: 265 SKGALKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPTVQFDFTGIGDLESKAKDA-L 323
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S ++ + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 324 VDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDA--------DKF 375
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ IS
Sbjct: 376 DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSIS 435
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
R+GG ++ L S+ +K +FS A + ++ +N Y+AC T
Sbjct: 436 DH----RSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLR-KENCMYQACPT 490
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C + R I+ ++D WV+ F E AE I+G +
Sbjct: 491 QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQN 550
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
L + KE+ + ++ + A + FR+ V Y +E R + TV PVDF
Sbjct: 551 TMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDY 609
Query: 505 SKYLLEEIAK 476
+ L+ I K
Sbjct: 610 GRRLIANIRK 619
>gb|AAH19119.1| Replication protein A1 [Mus musculus]
emb|CAI23976.1| replication protein A1 [Mus musculus]
dbj|BAE29849.1| unnamed protein product [Mus musculus]
dbj|BAE28302.1| unnamed protein product [Mus musculus]
dbj|BAE30530.1| unnamed protein product [Mus musculus]
dbj|BAE31755.1| unnamed protein product [Mus musculus]
dbj|BAE38134.1| unnamed protein product [Mus musculus]
dbj|BAE38476.1| unnamed protein product [Mus musculus]
sp|Q8VEE4|RFA1_MOUSE Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
ref|NP_080929.1| replication protein A1 [Mus musculus]
Length = 623
Score = 194 bits (493), Expect = 9e-48
Identities = 130/370 (35%), Positives = 188/370 (50%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E LP VQ++ I L L
Sbjct: 267 SKGALKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPTVQFDFTGIGDLESKAKDA-L 325
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S ++ + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 326 VDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDA--------DKF 377
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ IS
Sbjct: 378 DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSIS 437
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
R+GG ++ L S+ +K +FS A + ++ +N Y+AC T
Sbjct: 438 DH----RSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLR-KENCMYQACPT 492
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C + R I+ ++D WV+ F E AE I+G +
Sbjct: 493 QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQN 552
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
L + KE+ + ++ + A + FR+ V Y +E R + TV PVDF
Sbjct: 553 TMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDY 611
Query: 505 SKYLLEEIAK 476
+ L+ I K
Sbjct: 612 GRRLIANIRK 621
>dbj|BAE31105.1| unnamed protein product [Mus musculus]
Length = 644
Score = 194 bits (493), Expect = 9e-48
Identities = 130/370 (35%), Positives = 188/370 (50%), Gaps = 4/370 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E LP VQ++ I L L
Sbjct: 288 SKGALKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPTVQFDFTGIGDLESKAKDA-L 346
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S ++ + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 347 VDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDA--------DKF 398
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ IS
Sbjct: 399 DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSIS 458
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
R+GG ++ L S+ +K +FS A + ++ +N Y+AC T
Sbjct: 459 DH----RSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLR-KENCMYQACPT 513
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + Y CE C + R I+ ++D WV+ F E AE I+G +
Sbjct: 514 QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQN 573
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
L + KE+ + ++ + A + FR+ V Y +E R + TV PVDF
Sbjct: 574 TMYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDY 632
Query: 505 SKYLLEEIAK 476
+ L+ I K
Sbjct: 633 GRRLIANIRK 642
>ref|XP_868491.1| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 3 [Canis
familiaris]
Length = 611
Score = 193 bits (491), Expect = 2e-47
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 4/371 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+SKG L+IANKQF VKNDYE++ N V E LP VQ++ I L
Sbjct: 252 ISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQFDFTGIGDLESKTKD-S 310
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
L+DI+G+ +S + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 311 LIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATLWGEDA--------DR 362
Query: 1216 VDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ +L I
Sbjct: 363 FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ--ALDGI 420
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
S + ++GG ++ L + S+ +K +FS A + +++ +N Y+AC
Sbjct: 421 S--ISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLR-KENCMYQACP 477
Query: 862 T--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGC 689
T CNKKV + Y CE C R I+ + ++D WV+ F E AE IIG
Sbjct: 478 TQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIGQ 537
Query: 688 SADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAA 509
+ L + KE+ + ++ + A + FR+ V Y +E R + TV PVD+
Sbjct: 538 NTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYRE 596
Query: 508 ESKYLLEEIAK 476
+ L+ I +
Sbjct: 597 YGRRLIMNIRR 607
>ref|XP_868487.1| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 2 [Canis
familiaris]
Length = 614
Score = 193 bits (491), Expect = 2e-47
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 4/371 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+SKG L+IANKQF VKNDYE++ N V E LP VQ++ I L
Sbjct: 255 ISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQFDFTGIGDLESKTKD-S 313
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
L+DI+G+ +S + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 314 LIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATLWGEDA--------DR 365
Query: 1216 VDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ +L I
Sbjct: 366 FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ--ALDGI 423
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
S + ++GG ++ L + S+ +K +FS A + +++ +N Y+AC
Sbjct: 424 S--ISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLR-KENCMYQACP 480
Query: 862 T--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGC 689
T CNKKV + Y CE C R I+ + ++D WV+ F E AE IIG
Sbjct: 481 TQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIGQ 540
Query: 688 SADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAA 509
+ L + KE+ + ++ + A + FR+ V Y +E R + TV PVD+
Sbjct: 541 NTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYRE 599
Query: 508 ESKYLLEEIAK 476
+ L+ I +
Sbjct: 600 YGRRLIMNIRR 610
>ref|XP_451388.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH02976.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 621
Score = 193 bits (491), Expect = 2e-47
Identities = 118/376 (31%), Positives = 192/376 (51%), Gaps = 4/376 (1%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF--LPPVQYNLVKIDQLG 1418
G+ VSK ++ A QF +K+ YELSL + +VEE E +P + +N +K++ +
Sbjct: 256 GKAYFVSKARVQPAKPQFSNLKHPYELSLERDCVVEECMNEDANDVPEMHFNFIKLNDVN 315
Query: 1417 PYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTT 1238
V +D+VG+++SV P + K + +RD+ + DDSG +++ LW +
Sbjct: 316 N-VEKNTAIDVVGILKSVGPHFELAAK-SGKKFDRRDVEIVDDSGACISLGLWGE----- 368
Query: 1237 GQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT 1058
Q + + VVA+K ++V+DF G SLS S+L NPD+ EA LK WYD+ +T
Sbjct: 369 -QAIKFNLPEGSVVALKGVRVTDFNGKSLSMGNTSSLFANPDIQEAYTLKGWYDANASNT 427
Query: 1057 SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMW 878
+ + E G +DR ++ EK +FS+ A +S +K D N
Sbjct: 428 TFKALKTESGG--GADTSKFIADRTTIARAIESNLGRSEKGDYFSVKAAVSFLKVD-NFA 484
Query: 877 YRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAE 704
Y AC C KKV + CE C N RY++ I + D TG+ W+++FN+ AE
Sbjct: 485 YPACLNEGCQKKVIMQSDGTWRCEKCDMNHPHPKYRYMLTISIMDQTGQIWLTLFNDQAE 544
Query: 703 KIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 524
+++G SA+EL + KE + ++V ++ + FR+ + Y NE R R TV
Sbjct: 545 QLVGVSANELTEL-KENNNQAFVALTQKVQMNEYDFRIRAREDNYNNETRIRYTVANLHD 603
Query: 523 VDFAAESKYLLEEIAK 476
+ + AE+ +L E+ K
Sbjct: 604 LRWKAEADFLAAELLK 619
>ref|XP_548316.2| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) isoform 1 [Canis
familiaris]
Length = 616
Score = 193 bits (491), Expect = 2e-47
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 4/371 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+SKG L+IANKQF VKNDYE++ N V E LP VQ++ I L
Sbjct: 257 ISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQFDFTGIGDLESKTKD-S 315
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
L+DI+G+ +S + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 316 LIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATLWGEDA--------DR 367
Query: 1216 VDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+DSEG+ +L I
Sbjct: 368 FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ--ALDGI 425
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
S + ++GG ++ L + S+ +K +FS A + +++ +N Y+AC
Sbjct: 426 S--ISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLR-KENCMYQACP 482
Query: 862 T--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGC 689
T CNKKV + Y CE C R I+ + ++D WV+ F E AE IIG
Sbjct: 483 TQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIGQ 542
Query: 688 SADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAA 509
+ L + KE+ + ++ + A + FR+ V Y +E R + TV PVD+
Sbjct: 543 NTAYLGEL-KEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYRE 601
Query: 508 ESKYLLEEIAK 476
+ L+ I +
Sbjct: 602 YGRRLIMNIRR 612
>emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis]
sp|Q01588|RFA1_XENLA Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (p70)
Length = 609
Score = 192 bits (488), Expect = 3e-47
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 4/371 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQ+ +VKNDYE++ N V + +P VQ+ V I +L +
Sbjct: 249 SKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSADVPMVQFEFVSIGELESK-NKDTV 307
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
+DI+GV ++V V K +N + KR I + D SGK V+ +LW + A D
Sbjct: 308 LDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDA--------DKF 359
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PVVAIK ++SDF G SLS + ST+ INPD+PEA L++W+DSEG+ IS
Sbjct: 360 DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSIS 419
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
G GG + S L + ++ EK +F+ A I +++ +N Y+AC +
Sbjct: 420 ESRGGGTGGGNTNWKS----LLEVKNENLGHGEKADYFTSVATIVYLR-KENCLYQACPS 474
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + + CE C K R I+ ++D W++ F E AE I+G +
Sbjct: 475 QDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQN 534
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + KE+ + +Y + A + + FR V Y +E R + T PVD
Sbjct: 535 ATYLGEL-KEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEY 593
Query: 505 SKYLLEEIAKL 473
S+ L+ I K+
Sbjct: 594 SRRLIMNIRKM 604
>gb|AAH70559.1| LOC397937 protein [Xenopus laevis]
Length = 607
Score = 192 bits (488), Expect = 3e-47
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 4/371 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQ+ +VKNDYE++ N V + +P VQ+ V I +L +
Sbjct: 247 SKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSADVPMVQFEFVSIGELESK-NKDTV 305
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
+DI+GV ++V V K +N + KR I + D SGK V+ +LW + A D
Sbjct: 306 LDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDA--------DKF 357
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PVVAIK ++SDF G SLS + ST+ INPD+PEA L++W+DSEG+ IS
Sbjct: 358 DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSIS 417
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
G GG + S L + ++ EK +F+ A I +++ +N Y+AC +
Sbjct: 418 ESRGGGTGGGNTNWKS----LLEVKNENLGHGEKADYFTSVATIVYLR-KENCLYQACPS 472
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + + CE C K R I+ ++D W++ F E AE I+G +
Sbjct: 473 QDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQN 532
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + KE+ + +Y + A + + FR V Y +E R + T PVD
Sbjct: 533 ATYLGEL-KEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEY 591
Query: 505 SKYLLEEIAKL 473
S+ L+ I K+
Sbjct: 592 SRRLIMNIRKM 602
>emb|CAA22533.1| ssb1 [Schizosaccharomyces pombe]
ref|NP_595092.1| replication factor-a protein 1 [Schizosaccharomyces pombe 972h-]
gb|AAC49694.1| Rpa1 [Schizosaccharomyces pombe]
gb|AAC49437.1| single-stranded DNA binding protein p68 subunit
sp|Q92372|RFA1_SCHPO Replication factor-A protein 1 (Single-stranded DNA-binding protein
p68 subunit)
Length = 609
Score = 191 bits (486), Expect = 6e-47
Identities = 114/367 (31%), Positives = 203/367 (55%), Gaps = 2/367 (0%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+S+ + IA KQ+ V+N+YEL + + +AE +T +P +++ V + ++G V
Sbjct: 252 ISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQTAVPVAKFSFVSLQEVGD-VAKDA 310
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
++D++GV+Q+V P + + + KRDI + D +G + ++LW A
Sbjct: 311 VIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEFS------ 364
Query: 1216 VDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISA 1037
V ++A K +KV+DFQG SLS + ST+ ++PD+ E+ LK WYD +G+ A S
Sbjct: 365 VSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHSV 424
Query: 1036 EVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC--T 863
+ +T + +S ++R ++ + ++ E P +FSL I +I+ +N+ Y AC
Sbjct: 425 -ISSTLSTTGRS--AERKNIAEVQAEHLGMSETPDYFSLKGTIVYIR-KKNVSYPACPAA 480
Query: 862 TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
CNKKV + GS + CE C K RYI+ I + D TG+ W++VF++ + I+ +A
Sbjct: 481 DCNKKVFDQGGS-WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTA 539
Query: 682 DELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAES 503
DEL+ + +E +++++ + EA ++P++F+ Q + E R R TV +D+ ES
Sbjct: 540 DELNDL-QENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKEES 598
Query: 502 KYLLEEI 482
K L+ I
Sbjct: 599 KRLINFI 605
>ref|NP_001016043.1| replication protein A1, 70kDa [Xenopus tropicalis]
ref|NP_001015732.1| MGC107891 protein [Xenopus tropicalis]
gb|AAH89665.1| MGC107891 protein [Xenopus tropicalis]
sp|Q5FW17|RFA1_XENTR Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
emb|CAJ81527.1| replication protein A1 [Xenopus tropicalis]
Length = 609
Score = 191 bits (485), Expect = 8e-47
Identities = 125/373 (33%), Positives = 193/373 (51%), Gaps = 4/373 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQ+ +VKNDYE++ N V + +P VQ+ V I +L +
Sbjct: 250 SKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSADVPMVQFEFVPIGELESK-NKDTV 308
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
+DI+G+ ++ V + +N + KR+I + D SGK V+ +LW + A D
Sbjct: 309 LDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTLWGEDA--------DKF 360
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PVVAIK ++SDF G SLS + ST+ INPD+PEA L++W+DSEG+ IS
Sbjct: 361 DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSIS 420
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
G T G ++ L + ++ EK +F+ A I +++ +N Y+AC +
Sbjct: 421 ESRGGTGGGN-----TNWKSLLEVKTENLGHGEKADYFTSVATIVYLR-KENCLYQACPS 474
Query: 859 --CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCS 686
CNKKV + + CE C K R I+ ++D W++ F E AE I+G +
Sbjct: 475 QDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGENQWITCFQESAESILGQN 534
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
A L + KE+ + +Y + A + + FR+ V Y +E R + T PVD
Sbjct: 535 ATYLGEL-KEKNEQAYDEVFQNANFRSYTFRIRVKLETYNDESRIKATAMDVKPVDHKEY 593
Query: 505 SKYLLEEIAKLTA 467
S+ L+ I K+ A
Sbjct: 594 SRRLIMNIRKMAA 606
>ref|XP_719663.1| hypothetical protein CaO19_9640 [Candida albicans SC5314]
ref|XP_719539.1| hypothetical protein CaO19_2093 [Candida albicans SC5314]
gb|EAL00787.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gb|EAL00659.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
Length = 624
Score = 189 bits (481), Expect = 2e-46
Identities = 113/387 (29%), Positives = 199/387 (51%), Gaps = 14/387 (3%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SK + A K+F T+ + YEL+ +++ + E E+ +P + +N VK+DQ+
Sbjct: 249 GKVYYISKARVAAARKKFNTLSHPYELTFDKDTEITECFDESDVPKLNFNFVKLDQV-QN 307
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
+ ++D++G +++V P + K + +R+I+V D++G + + LWN+ AT
Sbjct: 308 LEANAIIDVLGALKTVFPPFQITAKSTGKVFDRRNILVVDETGFGIELGLWNNTATDFN- 366
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
++ VVA+K KVSD+ G +LS ++ NP PE+ LK WYD+ G S
Sbjct: 367 -----IEEGTVVAVKGCKVSDYDGRTLSLTQAGSIIPNPGTPESFKLKGWYDNIGIHESF 421
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
+ + AG S R+ ++ + + EKP +FS+ A ++ KP+ N Y
Sbjct: 422 KSLKID----NAGSGGDKISQRISINQALEEHSGSTEKPDYFSIKASVTFCKPE-NFAYP 476
Query: 871 ACTT-------------CNKKVTEAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGEA 734
AC CNKK+ G W CE C K E + RY++ ++D TG
Sbjct: 477 ACPNLVQNADATRPAQVCNKKLVFQDNDGTWRCERCAKTYEEPTWRYVLSCSVTDSTGHM 536
Query: 733 WVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKR 554
WV++FN+ AEK++G A EL + +KE+ + + + RV Q Y +E +
Sbjct: 537 WVTLFNDQAEKLLGIDATELVK-KKEQKSEVANQIMNNTLFKEFSLRVKAKQETYNDELK 595
Query: 553 QRITVRGEAPVDFAAESKYLLEEIAKL 473
R + G +D+A+ES++L++++ +L
Sbjct: 596 TRYSAAGINELDYASESQFLIKKLDQL 622
>emb|CAG32101.1| hypothetical protein [Gallus gallus]
ref|NP_001006221.1| replication protein A1, 70kDa [Gallus gallus]
sp|Q5ZJJ2|RFA1_CHICK Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 614
Score = 189 bits (480), Expect = 3e-46
Identities = 122/374 (32%), Positives = 192/374 (51%), Gaps = 8/374 (2%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
+KG+L+ ANKQ+ VKNDYE++ N V + LP VQ++ V I L +
Sbjct: 255 TKGNLKTANKQYTAVKNDYEITFNNETSVVPCDDAQHLPSVQFDFVSISDL-ENTPKDSI 313
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VD++G+ +S + K N + KR++ + D SGK VT +LW + A +
Sbjct: 314 VDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGNEA--------EKF 365
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
D S PV+AIK +VSDF G SLS + ST+ +NPD PEA L+ W+DSEG+ A IS
Sbjct: 366 DGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLECASIS 425
Query: 1039 AEVGATRAG---GFKSMYSDRVFLSHITSDPAMGQ-EKPVFFSLYAIISHIKPDQNMWYR 872
G + +G +K++Y +GQ +K +FS I H++ +N Y+
Sbjct: 426 DVRGGSASGVNTNWKTLYE--------AKSERLGQGDKADYFSCVGTIVHLR-KENCMYQ 476
Query: 871 ACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
AC + CNKKV + Y CE C + R ++++ ++D WV+ F E AE I
Sbjct: 477 ACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFI 536
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
+G SA L + K++ + ++ + A + + F++ V Y +E R + T PV+
Sbjct: 537 LGQSATFLGEL-KDKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVN 595
Query: 517 FAAESKYLLEEIAK 476
+ SK L+ I +
Sbjct: 596 YREYSKRLIASIRR 609
>gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895]
ref|NP_985540.1| AFL008Wp [Eremothecium gossypii]
Length = 694
Score = 189 bits (479), Expect = 4e-46
Identities = 116/374 (31%), Positives = 191/374 (51%), Gaps = 2/374 (0%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ VSK ++ A QF +K+ YEL L+ + +VEE +P + ++ +K+DQ+
Sbjct: 330 GKVYYVSKARIQPAKPQFSNLKHPYELQLDRDTVVEECFEAADVPKMNFSFIKLDQISSM 389
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
VDI+GV+Q+V+P + K + +RDIV+ D++G +V + LWN+ A
Sbjct: 390 EANSN-VDILGVIQTVNPPFEMIAK-SGKKFNRRDIVIVDETGYSVNVGLWNEQAVDFN- 446
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
+ V+A+KS++V+DF G SLS STL NPD+PEA +K WY S+G T+
Sbjct: 447 -----LPEGSVIAVKSVRVTDFGGKSLSMGFSSTLHPNPDIPEAYAIKGWYSSKGTSTTF 501
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
+ E G + + +DR+ + D +K +F++ ++ +K D N Y
Sbjct: 502 HSLKMEGGDRNSMRY---VADRITIGKAKDDNLGRSDKGDYFNVRGAVNFLKVD-NFAYP 557
Query: 871 ACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
AC+T C KKV E + CE CQ + RY++ + D T + W+++FN+ AEK+
Sbjct: 558 ACSTEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILDETSQIWITLFNDQAEKL 617
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
+ A+ L + K + + + + FRV + Y E R R TV P+
Sbjct: 618 LSMDANTLTEL-KNTDPEKFQKVTQSVQMNEYDFRVRAREDTYNEETRIRYTVTNLYPLR 676
Query: 517 FAAESKYLLEEIAK 476
+ E+ YL E+ K
Sbjct: 677 WKVEADYLAGELTK 690
>emb|CAB78915.1| replication A protein-like [Arabidopsis thaliana]
emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana]
Length = 717
Score = 187 bits (476), Expect = 8e-46
Identities = 120/377 (31%), Positives = 209/377 (55%), Gaps = 9/377 (2%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGR 1400
+S+GSLR A K F ++NDYE+ L+ + +++ E + +P Q++ I + +
Sbjct: 243 ISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIES-MENN 301
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
+VD++G+V S+SPT+++ RK T PKR + + D SG++V +++W D Q L D
Sbjct: 302 CIVDVIGIVSSISPTVTITRKNGTAT-PKRSLQLKDMSGRSVEVTMWGDF-----QSLCD 355
Query: 1219 MVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S
Sbjct: 356 S-GVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLS 414
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC-- 866
E + R +S I + EKP + ++ A I ++K D N Y AC
Sbjct: 415 REFSGS------GKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFD-NFCYTACPI 467
Query: 865 ----TTCNKKVTEAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEK 701
C+KKVT+ G G W CE C K+ EC RYI+ +++ D T V+ F E E+
Sbjct: 468 MNGDRPCSKKVTDN-GDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEE 526
Query: 700 IIGCSADELDRIRKEEGD-DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 524
I+G SA +L ++ E D + + +++ + + F++ V + + +E+R + TV
Sbjct: 527 IMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDK 586
Query: 523 VDFAAESKYLLEEIAKL 473
++++A+++ +L + KL
Sbjct: 587 LNYSADTRTMLGAMDKL 603
>ref|XP_749761.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
gb|EAL87723.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
Length = 529
Score = 186 bits (473), Expect = 2e-45
Identities = 116/363 (31%), Positives = 191/363 (52%), Gaps = 6/363 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
++IA KQF + NDYEL+ ++ +VE+AE ++ +P V++N + L V +DI+
Sbjct: 174 VQIAKKQFTNLNNDYELTFEKDTVVEKAEDQSDVPQVRFNFTTVGDLQS-VEKDTTIDII 232
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V T + K ++ KR++ + D SG +V +++W A
Sbjct: 233 GVLKDVGETTQIVSKTTSKPYDKRELTLVDSSGFSVRLTIWGSTALNFN------ATPES 286
Query: 1201 VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP----ISAE 1034
V+A K +KVSDF G SLS + ++ ++PD+ EA LK WYD++G+ + A +A
Sbjct: 287 VIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFASHATMSNAS 346
Query: 1033 VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT-- 860
A R K+ ++ + + E V+FSL + +IK D NM Y AC +
Sbjct: 347 SSAKRLDHLKT-------IAQVREEQLGMSEDAVYFSLKGTVIYIKQD-NMCYPACLSEG 398
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVTE + CE C K RYIM+I +SD TG+ W+S F+E ++++G SAD
Sbjct: 399 CNKKVTELDPGQWRCESCDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMGTSAD 458
Query: 679 ELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESK 500
+L +R + G+ + +EA FR + +++R R V PV+++ E+
Sbjct: 459 QLMDLR-QNGEKAAGDIFQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNYSEEAS 517
Query: 499 YLL 491
L+
Sbjct: 518 RLM 520
>ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
gb|EAA67349.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
Length = 607
Score = 184 bits (467), Expect = 9e-45
Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 4/364 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
+++A KQF + NDYEL+ + +VE+AE +T +P V++N I +L V VD++
Sbjct: 251 VQLAKKQFSNLPNDYELTFERDTVVEKAEDQTNVPQVRFNFCSIQELQS-VEKDNTVDVI 309
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V + K D KR++ + DD+G +V +++W A + D++P
Sbjct: 310 GVLKEVGEIGDITSKKDGRPFQKRELTLVDDTGFSVRVTIWGKNANS--------FDAAP 361
Query: 1201 --VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVG 1028
VVA K KVSDF G SLS + T+ ++PD+P+A LK WYDS G+ + A
Sbjct: 362 ESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYDSAGRTDTFATHQNMAS 421
Query: 1027 ATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT--CN 854
A G K D ++ + D +G + ++++ A I +K +N Y AC + CN
Sbjct: 422 VGSATGRK---EDLKTIAQV-KDENLGMDDQAYYTIKATIVFVK-QENFCYAACLSQGCN 476
Query: 853 KKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADEL 674
KKVT+ + CE C + + RY++ + ++D T W++ F++ +++G +ADE+
Sbjct: 477 KKVTQMPDGTWQCEKCNLSHEKPEYRYVLSLNVADHTSHQWLTGFDDFGRQVMGRTADEM 536
Query: 673 DRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYL 494
+ KE D +EA FR + +R R V P+DF +E L
Sbjct: 537 MEL-KENDDTKLTAAFEEANCKKFTFRCRAKMDNFGEAQRIRYQVMSVTPLDFKSEGTKL 595
Query: 493 LEEI 482
E I
Sbjct: 596 AELI 599
>ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
gb|EAA62003.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
Length = 606
Score = 181 bits (459), Expect = 8e-44
Identities = 113/365 (30%), Positives = 196/365 (53%), Gaps = 5/365 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
++IA KQF + NDYEL+ + +VE+AE + +P V++N I L V +D++
Sbjct: 252 VQIAKKQFTNLNNDYELTFERDTLVEKAEEQNDVPQVRFNFTTIGDLQS-VEKDTTIDVI 310
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V T + K + KR++ + D++G +V +++W TT +S
Sbjct: 311 GVLKDVGETTQIVSKTTKKPYDKRELTLVDNTGFSVRLTIWG----TTAMNFAASPES-- 364
Query: 1201 VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVG-- 1028
VVA K +KVSDF G SLS + ++ ++PD+ EA LK WYD++G++ + A ++ VG
Sbjct: 365 VVAFKGVKVSDFGGKSLSLLSSGSVTVDPDIEEAHRLKGWYDAQGRNENFASHASSVGTM 424
Query: 1027 -ATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT--C 857
AT+ K+ ++ + + E+P +F+L A + +IK D N+ Y AC + C
Sbjct: 425 SATKRDQLKT-------IAQVREEQLGMSEEPSYFTLRATVVYIKQD-NLCYPACLSEGC 476
Query: 856 NKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADE 677
NKKVTE + CE C K RYIM++ +SD TG+ +++ F++ ++G SA++
Sbjct: 477 NKKVTEVDPGQWRCERCDKTHPRAEYRYIMLVNVSDHTGQLYLNCFDDVGRLLLGMSANQ 536
Query: 676 LDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKY 497
L + + +G + ++ AT F Y +++R R V PV+++ E+
Sbjct: 537 LMELPQNDG-KALGNVIQNATCRTWTFGCRAKIDHYGDQQRIRYQVSYAKPVNYSEEASR 595
Query: 496 LLEEI 482
L + I
Sbjct: 596 LADII 600
>ref|XP_503990.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79583.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 589
Score = 178 bits (452), Expect = 5e-43
Identities = 119/375 (31%), Positives = 185/375 (49%), Gaps = 10/375 (2%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVG 1406
V++ + +ANK+F V NDYEL + ++ +EAE +P Y+ V +D+L
Sbjct: 232 VTQCRVSMANKKFSNVNNDYELVFGRDTVIIQADEAEAAA-IPTANYSFVTLDKLQDVEV 290
Query: 1405 GRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQEL 1226
G VD++GVVQ+V P K +R++++ D SG ++ + + AT+ +
Sbjct: 291 GNN-VDVLGVVQNVGPLEDGVAKATGNPYKRRNLMLGDKSGFATRLTFFGEKATSFDE-- 347
Query: 1225 LDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
V ++AIK +V DF G +LST ST+ + P + E LK WY SEGK TS
Sbjct: 348 -GTVPVGTIIAIKGARVGDFNGRNLSTSHSSTIAVEPAIDETYALKGWYASEGKQTSFKQ 406
Query: 1045 ISAE-----VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
+ V AT S Y EKP +++L A + H++ N
Sbjct: 407 LQTTTTNKPVAATPIDVATSSYGQ--------------SEKPDYYTLQAWVVHVRTG-NF 451
Query: 880 WYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHA 707
Y AC T CNKKV E G + CE C+KN + RYI+ I + D TG W++ FNE A
Sbjct: 452 AYPACQTPDCNKKVVE-HGDEWRCEKCEKNMDKPLYRYILSINVGDATGSMWLTAFNEPA 510
Query: 706 EKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEA 527
E I+G +AD+L I+ +GDD + +++ T + R Q Y E + R V
Sbjct: 511 EVIMGMTADQLTEIQTSQGDDEFEQAVQKVTGKQYTLRCRSKQEFYNEESKARHQVLTAQ 570
Query: 526 PVDFAAESKYLLEEI 482
+D+ + L++++
Sbjct: 571 ALDYLKDIDELIKDL 585
>ref|NP_567576.1| DNA binding / nucleic acid binding [Arabidopsis thaliana]
Length = 461
Score = 176 bits (447), Expect = 2e-42
Identities = 111/354 (31%), Positives = 193/354 (54%), Gaps = 10/354 (2%)
Frame = -1
Query: 1504 NENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNE 1325
N + I + E + +P Q++ I + + +VD++G+V S+SPT+++ RK
Sbjct: 4 NASTIKQCYEEDAAIPRHQFHFRTIGDIES-MENNCIVDVIGIVSSISPTVTITRKNGTA 62
Query: 1324 TIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS--PVVAIKSLKVSDFQGVSL 1151
T PKR + + D SG++V +++W D GQ L + DS PV+A+K+ ++S+F G ++
Sbjct: 63 T-PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTV 121
Query: 1150 STIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSH 971
STIG S L I+PD EA+ LK+W++ EGK +S E + R +S
Sbjct: 122 STIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGS------GKVDVRKTISQ 175
Query: 970 ITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC------TTCNKKVTEAFGSGYW-CE 812
I + EKP + ++ A I ++K D N Y AC C+KKVT+ G G W CE
Sbjct: 176 IKDEKLGTSEKPDWITVSATILYLKFD-NFCYTACPIMNGDRPCSKKVTDN-GDGTWRCE 233
Query: 811 GCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD-DSYV 635
C K+ EC RYI+ +++ D T V+ F E E+I+G SA +L ++ E D + +
Sbjct: 234 KCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFE 293
Query: 634 LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+++ + + F++ V + + +E+R + TV ++++A+++ +L + KL
Sbjct: 294 DIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKL 347
>dbj|BAD69789.1| Replication protein A large subunit [Bombyx mori]
Length = 598
Score = 176 bits (445), Expect = 3e-42
Identities = 112/374 (29%), Positives = 195/374 (52%), Gaps = 5/374 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEG-ETFLPPVQYNLVKIDQLGPYVGGR 1400
+S+ +++ ANK+F T+KNDYE++ +V E G E+ +P VQY+ + I ++
Sbjct: 236 ISRCAIKTANKKFTTLKNDYEMTFTAETVVGEYVGDESAVPTVQYDFLPISEIANKET-E 294
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLW-NDLATTTGQELL 1223
L+D++ V +S S + K + + KR++++ D SG VT++LW N+ G
Sbjct: 295 TLIDLIDVCKSASDVQELTAKSTGKLLKKREVMLVDASGGAVTLTLWGNEAEKFEG---- 350
Query: 1222 DMVDSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
+++P++A+K ++++F G SLS + + L +NPD+PEA L+ WYD+ G D +
Sbjct: 351 ---NTNPILAVKGARLTEFNGSKSLSCLSSTMLRLNPDVPEAHKLRGWYDNGGADADIVN 407
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
ISA ++G F ++ + S S EK ++SL +++ +N Y+AC
Sbjct: 408 ISA-----KSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTF-SENAVYKAC 461
Query: 865 TT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
CNKK+ + + CE C + R ++ +SDPTG+ V++FNE AE ++G
Sbjct: 462 PQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLG 521
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
SA+E+ R+ E + Y E + +F+ + +E R + TV PVD+
Sbjct: 522 KSAEEIARL-SEYDKNEYNKIFDEVKFKTFVFKFRTKMENFNDESRLKTTVVNVQPVDYK 580
Query: 511 AESKYLLEEIAKLT 470
LL+ I T
Sbjct: 581 DGIARLLKNIKTAT 594
>emb|CAG08885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 631
Score = 176 bits (445), Expect = 3e-42
Identities = 121/377 (32%), Positives = 204/377 (54%), Gaps = 4/377 (1%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLN-ENAIVEEAEGETFLPPVQYNLVKIDQLGP 1415
G+ +SK +L++ANKQ+ T+ +DYE++L+ ++IV A+G+ +P Q + V I +L
Sbjct: 272 GKVYYISKATLKVANKQYNTLNHDYEMTLHAHSSIVPCADGQD-IPAAQCDFVPIAELEN 330
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT-T 1238
++D++GV ++V + + E + KR + + D +GK V +LW + A
Sbjct: 331 R-DKDAIIDVIGVCKTVEDVSRITTRTSRE-VSKRTLHLIDTTGKMVAATLWGEEAEKFD 388
Query: 1237 GQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT 1058
G E PVVAIK ++SDF G SLST+ ST+ +NPD+PEA L++WYD G
Sbjct: 389 GSE-------QPVVAIKGARLSDFGGRSLSTLFSSTVMVNPDIPEAIRLRAWYDHGG--- 438
Query: 1057 SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMW 878
A S + T++ G + + + LS + ++ G + +FS A + +I+ D +
Sbjct: 439 -YAQDSQSLSETKSRGSGARMNWKT-LSEVKNE-NFGTRRKDYFSCVATLLYIRKDSCL- 494
Query: 877 YRAC--TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAE 704
YRAC + CNKKV + F + CE C ++ R ++ L+D WV+ F E AE
Sbjct: 495 YRACPSSDCNKKVIDQFNGWFRCEKCNQDFPNFEYRLLLSANLADFGDNQWVTCFQETAE 554
Query: 703 KIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 524
++G SA+ L R+R + + ++ ++A + ++F++ V Y +E R + TV P
Sbjct: 555 VLLGHSAETLGRLR-DTDEAAFDAVFQKANFTSYIFKIRVKLETYNDESRVKATVMEVQP 613
Query: 523 VDFAAESKYLLEEIAKL 473
+D S+ LL I KL
Sbjct: 614 LDHREYSRRLLGNIRKL 630
>gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 175 bits (443), Expect = 6e-42
Identities = 108/339 (31%), Positives = 176/339 (51%), Gaps = 3/339 (0%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
+++A KQF V NDYE+ + ++E+AE ++ +P V++N I +L V +D++
Sbjct: 261 VQMAKKQFSNVANDYEIMFQHDTVIEKAEDQSSVPQVRFNFCTIQELQE-VEKDATIDVI 319
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V ++ K + KR++ + DD+G +V +++W A L
Sbjct: 320 GVLKDVGKQEEIQSKTTQKGYDKRELTLVDDTGYSVRVTIWGKAAAEFDASL------ES 373
Query: 1201 VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGK-DTSLAPISAEVGA 1025
VVA K ++VSDF G SLS + T+ I+PD+PEA LK WYD++G+ +T+ A S
Sbjct: 374 VVAFKGMRVSDFGGRSLSLLSSGTMAIDPDIPEAHKLKGWYDAQGRGNTTFATHSHLSSI 433
Query: 1024 TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT--CNK 851
A G K + ++ I S+ +G E +F++ I H++ +N Y AC + C+K
Sbjct: 434 GAAAGQKD---EMKMIAQIKSEN-IGMEDTAYFTIKGTIVHLR-QENFAYPACISENCSK 488
Query: 850 KVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELD 671
KVT + + CE C RYIM +SD TG WVS F++ A I+G SADE+
Sbjct: 489 KVTPSMDDKWRCERCNITHDRAQYRYIMSADVSDHTGHTWVSCFDDSARIIMGKSADEMM 548
Query: 670 RIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKR 554
++ E D S + A +FR Y ++ +
Sbjct: 549 ELKNRE-DGSCAEAFEAANCRKMVFRCRAKMDTYGDQPK 586
>gb|AAT68105.1| replication protein A 70kd subunit [Danio rerio]
gb|AAH66711.1| Wu:fi14b08 protein [Danio rerio]
sp|Q6NY74|RFA1_BRARE Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (p70)
Length = 601
Score = 174 bits (442), Expect = 7e-42
Identities = 120/381 (31%), Positives = 196/381 (51%), Gaps = 6/381 (1%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SKG+L+IANKQF ++KNDYE++LN + E +P +Q + V I L
Sbjct: 239 GKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPCEDSNDVPMLQCDFVSIADLE-- 296
Query: 1411 VGGRE---LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLW-NDLAT 1244
RE ++D++GV ++ + K E + KR+I + D SG+ + +++W +D T
Sbjct: 297 --SREKDTILDVIGVCKNAEDVARIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDAET 353
Query: 1243 TTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGK 1064
G P++AIK ++SDF G SLST+ ST+ INPD+PEA L+ WYD EG
Sbjct: 354 FDGS-------GQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGH 406
Query: 1063 DTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQN 884
E+ GG + + L+ + ++ +K +FS A I +I+ +N
Sbjct: 407 ALD-GQSMTELRGPGGGGNTNWKT----LAEVKNEHLGHGDKADYFSCIATIVYIR-KEN 460
Query: 883 MWYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
Y+AC + CNKKV + + CE C K + R ++ ++D WV+ F +
Sbjct: 461 CLYQACPSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDT 520
Query: 709 AEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGE 530
AE ++G ++ L ++ K+ + ++ + A + +FR V Y +E R ++TV
Sbjct: 521 AETLLGQNSSYLGQL-KDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDA 579
Query: 529 APVDFAAESKYLLEEIAKLTA 467
PVD SK L+ I KL A
Sbjct: 580 KPVDHREYSKRLIINIRKLAA 600
>dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae]
Length = 605
Score = 174 bits (440), Expect = 1e-41
Identities = 111/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
+++A KQF + NDYEL+ + +VE+AE + +P ++++ I L V +D++
Sbjct: 250 VKLAKKQFTNLNNDYELTFERDTVVEKAEDQADVPQIRFSFTTIGDLQS-VEKDTTIDVI 308
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
GV++ V+ + K N+ KR++ + D +G +V +++W A V
Sbjct: 309 GVLKEVAEVSQIMSKTTNKPYNKRELTLVDSTGFSVRLTVWGSTALNFN------VTPES 362
Query: 1201 VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGA- 1025
V+A K +KVSDF G SLS + ++ ++PD+ EA LK WYD++G+D A ++ G
Sbjct: 363 VIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHKLKGWYDAQGRDGVFASHASMPGVA 422
Query: 1024 ---TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT-- 860
T+ FK++ + + + ++ +FSL A + +IK D M Y AC +
Sbjct: 423 ASTTKLEQFKTV-------AQVKEEQLGMSDEVAYFSLKATVIYIKQD-TMCYPACLSEG 474
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVTE + CE C K RYIM+I +SD TG+ ++S F+E ++G SAD
Sbjct: 475 CNKKVTELDPGQWRCERCDKTHPRPEYRYIMLISVSDHTGQLYLSCFDEVGRYMMGTSAD 534
Query: 679 ELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESK 500
+L IR+ + D + ++A FR + +++R R + PV+++ E+
Sbjct: 535 QLMEIRQND-DKAAGDIFQDANCRTWNFRCRAKIDNFGDQQRIRCQIVTAKPVNYSEEAL 593
Query: 499 YLLEEI 482
L I
Sbjct: 594 RLANMI 599
>emb|CAA94241.1| replication protein A [Drosophila melanogaster]
ref|NP_524274.1| Replication Protein A 70 CG9633-PA [Drosophila melanogaster]
gb|AAL39476.1| LD04815p [Drosophila melanogaster]
gb|AAF54206.1| CG9633-PA [Drosophila melanogaster]
sp|Q24492|RFA1_DROME Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A)
(Replication factor-A protein 1) (Single-stranded
DNA-binding protein) (DmRPA1)
Length = 603
Score = 173 bits (438), Expect = 2e-41
Identities = 111/375 (29%), Positives = 194/375 (51%), Gaps = 6/375 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEG--ETFLPPVQYNLVKIDQLGPYVGG 1403
+SK L+ ANKQ+ ++ N YE++ + +V+ E + +P ++YNLV I + +
Sbjct: 239 ISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSG-MEN 297
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
+ VD +G+ + V S + N+ KRDI + D S ++++LW D A +
Sbjct: 298 KAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV- 356
Query: 1222 DMVDSSPVVAIKSLKVSDFQG-VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
PV+ +K ++++F G SLS G S ++INPD+PEA L+ W+D+ G D+
Sbjct: 357 -----QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANM 411
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
+SA G GG S ++ + L + +KP +F A++ HI +N +YRAC
Sbjct: 412 VSARTG----GG--SFSTEWMTLKDARARNLGSGDKPDYFQCKAVV-HIVKQENAFYRAC 464
Query: 865 --TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
+ CNKKV + + CE C R ++ + + D T WVS FNE E+++G
Sbjct: 465 PQSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLG 524
Query: 691 CSADELDRIRKEEGDDSYVLKLKEA-TWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDF 515
++ E+ E D + ++ A + H+F++ Y + R ++TV+ AP++
Sbjct: 525 HTSQEVGEAL--ENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINH 582
Query: 514 AAESKYLLEEIAKLT 470
+K+LL+E+ +LT
Sbjct: 583 KEYNKHLLKELQELT 597
>emb|CAG84575.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_456619.1| hypothetical protein DEHA0A06875g [Debaryomyces hansenii CBS767]
Length = 620
Score = 172 bits (435), Expect = 5e-41
Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 15/385 (3%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SK ++ A QF + + YEL+L+ + VEE T +P + +N K++Q+
Sbjct: 244 GKVYYISKARIQQAKPQFSHLSHPYELALDRDTNVEECFDTTDVPKIHFNFTKLNQIES- 302
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
++D++GV++ V+P + K + +R+I + DDS +T+ LWN+ A
Sbjct: 303 CEPNSIIDVIGVLKEVNPVFQITAKSTGKPFDRRNITIVDDSNFAITVGLWNNTAVD--- 359
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
D + S V+A K K+ DF G SL+ ++ NPD EA LK W+D++G + +
Sbjct: 360 --FDTSEGS-VIAFKGCKIQDFAGRSLTLTHAGSMMANPDTAEAYQLKGWFDNQGVNENF 416
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
+ E + + ++ ++R + + EKP FF++ A ++ K + N Y
Sbjct: 417 KTLKNENSSNQ-----NLINNRKSILQAQEENLGMSEKPDFFNIKATVNFFKTE-NFCYP 470
Query: 871 AC------------TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWV 728
AC TTCN+KV E + CE C N +E RYI+ + D +G+ W+
Sbjct: 471 ACNNSLQSSSQQPSTTCNRKVVEQPDGTWRCEKCDINFNEPHYRYILNCSVMDSSGQLWM 530
Query: 727 SVFNEHAEKIIGCSADELDRIRKEE-GDDSYVLK--LKEATWVPHLFRVSVTQHEYMNEK 557
++F++ A K+ G +A EL +R+++ +++ V + + + T FR+ Q Y
Sbjct: 531 TLFDQEANKLFGKTAGELLTLREQQTNNENNVFQDLINDITMKEFNFRLKARQDSYNGVV 590
Query: 556 RQRITVRGEAPVDFAAESKYLLEEI 482
R R VDF AE ++L E+
Sbjct: 591 RVRYQAMTINDVDFNAECEHLCSEL 615
>ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
emb|CAD25779.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 623
Score = 168 bits (425), Expect = 7e-40
Identities = 120/375 (32%), Positives = 180/375 (48%), Gaps = 2/375 (0%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ ++KG++++ANKQ+ T DYE+ L++++ V A + P +N VKI L
Sbjct: 282 GKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAADDGS-PKYFFNFVKISDL--- 337
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
G D +GVV+ V +V + + KRD V+ DD G +V ++LW A
Sbjct: 338 TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELLKRDAVLVDDGG-SVRLTLWGPKAELE-- 394
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
++S V+A+KS+KVS+F G+S+ST G S + NPD+ EA L+ WY S GKD +
Sbjct: 395 -----IESGMVLALKSIKVSEFNGISISTTGGSQVVTNPDIAEAHELEGWYQSIGKDMQV 449
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
E K V S +T G + +K D +WY
Sbjct: 450 TLPRREE--------KRRLIQEVKESDLTYSTVQG-----------TVMFLKED-GLWYT 489
Query: 871 AC--TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
+C CNKKV G Y CE C +C RY++ + L D +G+ WVS+F+E A
Sbjct: 490 SCKGEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFSGQMWVSLFDEVATSF 549
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
G SA E+ ++ EE ++ + LFR+ Q Y +E R R + +D
Sbjct: 550 FGISAREM-KVMSEEAPGELQALIRRMYFRECLFRIKSKQDSYNDEIRMRYSGLSVENLD 608
Query: 517 FAAESKYLLEEIAKL 473
ESK LL I K+
Sbjct: 609 ILKESKRLLGVIEKM 623
>gb|EAL27901.1| GA21928-PA [Drosophila pseudoobscura]
Length = 590
Score = 166 bits (419), Expect = 3e-39
Identities = 108/374 (28%), Positives = 187/374 (50%), Gaps = 6/374 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEG--ETFLPPVQYNLVKIDQLGPYVGGR 1400
SK L+ ANKQF + N YE++ V+ E + +P ++YNLV I ++ + +
Sbjct: 227 SKCQLKPANKQFSQLNNAYEMTFTGETAVQLCEDADDGAIPDIKYNLVPISEVSG-MENK 285
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
VD +G+ + V + + N+ KRD+ + D S ++++LW D A +
Sbjct: 286 AAVDTIGICKEVGELQAFTSRTTNKEFKKRDLTLVDMSNSAISLTLWGDDAVNFDGHV-- 343
Query: 1219 MVDSSPVVAIKSLKVSDFQG-VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
PV+ +K ++++F G SLS G S ++INPD+PEA L+ W+D+ G D +
Sbjct: 344 ----QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDNVANMV 399
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC- 866
SA G GG S +D + L + +KP +F A++ HI +N +YRAC
Sbjct: 400 SARTG----GG--SFSTDWMTLKDARARNLGSGDKPDYFQCKAVV-HIVKQENAFYRACP 452
Query: 865 -TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGC 689
CNKKV + Y CE C R ++ + + D T WV+ FNE E+++
Sbjct: 453 QADCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRWVTCFNETGEQLLKH 512
Query: 688 SADELDRIRKEEGDDSYVLKLKEA-TWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
++ E+ E D + ++ A + H+F++ Y + R ++TV+ P++
Sbjct: 513 TSQEIGEAL--ENDPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVGPLNHK 570
Query: 511 AESKYLLEEIAKLT 470
+++LL+E+ +LT
Sbjct: 571 EYNRHLLKELKELT 584
>gb|EAA01767.2| ENSANGP00000015823 [Anopheles gambiae str. PEST]
ref|XP_321709.2| ENSANGP00000015823 [Anopheles gambiae str. PEST]
Length = 612
Score = 165 bits (418), Expect = 4e-39
Identities = 111/377 (29%), Positives = 193/377 (51%), Gaps = 8/377 (2%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGR 1400
+SK L+ ANKQ+ ++KNDYE+++ + IV+E + + +P +QYN V I Q+ +
Sbjct: 249 ISKCQLKPANKQYTSLKNDYEMTMTNDTIVQECKDADGSMPEIQYNFVPISQIAN-MEPN 307
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
+VD++G+ + S + K + KR+I + D S +V ++LW D A
Sbjct: 308 AMVDVIGMCKDASDVVQFTAKTSGRELRKREITLVDSSNASVQLTLWGDDAQNFP----- 362
Query: 1219 MVDSSPVVAIKSLKVSDFQG-VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
+ PVV +K +VS+F G SL IG S +++NPDL A ++ W+++ G + S++ +
Sbjct: 363 -ATTHPVVLLKGARVSEFGGGKSLGLIGGSVMKLNPDLEMAHKVRGWFENGGSEASVSSV 421
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC- 866
SA R GG + ++ + +KP +F + A+I IK N Y+AC
Sbjct: 422 SA-----RTGGAAGVSTEWLSFQEAKDKNLGAGDKPDYFQVKAMIHTIK-SANAVYKACP 475
Query: 865 -TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGC 689
CNKKV + + CE C R ++ + + D T WV+VF E AE+++G
Sbjct: 476 QADCNKKVIDQENGQFRCEKCNAEFPNFKYRLLVNMLIGDWTSNRWVTVFTELAEEMLGK 535
Query: 688 SADELD---RIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEK-RQRITVRGEAPV 521
S+ E+ +KEE + + ++ +F++ T+ EY E+ R + + APV
Sbjct: 536 SSQEIGSSLEYQKEEAEKLFT----SISFKSFVFKLR-TKVEYFGEQPRNKTSAVSVAPV 590
Query: 520 DFAAESKYLLEEIAKLT 470
+ + L++ I +LT
Sbjct: 591 NHKEYNALLIKSIQELT 607
>emb|CAA80682.1| replication protein A 51 kilodalton subunit [Crithidia fasciculata]
sp|Q23696|RFA1_CRIFA Replication factor A 51 kDa subunit (RP-A) (RF-A) (Replication
factor-A protein 1) (Single-stranded DNA-binding protein
P51 subunit)
Length = 467
Score = 157 bits (396), Expect = 2e-36
Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 6/325 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLN---ENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGG 1403
S G ++ AN++F V NDYEL+ + E + + LP +YN V I+ L G
Sbjct: 84 SGGQVKNANRRFSNVNNDYELTFDRASEVILARQDSSAAALPMQRYNFVPIELLKQREVG 143
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
LVD++GVV V S+ +K + KR++ + D S V ++ WND A +
Sbjct: 144 -SLVDVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMSA-AVEVTFWNDEAKAWNYPV- 200
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP 1046
VVA++ LKV F GV+LS+ ++ +++NP DLP+ K L +WY S G ++
Sbjct: 201 -----GTVVALRQLKVGSFDGVTLSSTYQTKIDVNPADLPDVKKLATWYVSTGGANVVSL 255
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
S +GA GG + R +L I S+ KP + + + + K D WY AC
Sbjct: 256 SSQGLGAGGGGGGEGNRG-RKYLDEIQSEGIGRGAKPEYVDVRCVPIYFKQDAQ-WYDAC 313
Query: 865 TTCNKKVTE--AFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
TCNKKVTE A G + CE C RY++ I+++D + W+++FNE + G
Sbjct: 314 PTCNKKVTEEGAQGDRFRCEKCDATVVPTQ-RYLVSIQVTDNVSQVWLTLFNEAGVEFFG 372
Query: 691 CSADELDRIRKEEGDDSYVLKLKEA 617
A EL R +E D Y+ KL +A
Sbjct: 373 MEASELKRRAQE--DPLYIAKLAQA 395
>gb|AAR84278.1| putative replication protein A subunit 1 [Leishmania amazonensis]
Length = 467
Score = 156 bits (395), Expect = 2e-36
Identities = 110/324 (33%), Positives = 168/324 (51%), Gaps = 6/324 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF---LPPVQYNLVKIDQLGPYVGG 1403
S G ++ AN++F V NDYEL+ + ++ + A +T LP +YN V I+ L G
Sbjct: 84 SGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPMQRYNFVPIELLKQREVG 143
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
LVD++GVV V S+ +K + KR++ + D + V ++ WND A +
Sbjct: 144 -SLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA-AVEVTFWNDEAKAWCYPV- 200
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP 1046
VVA++ LKV F GV S+ ++ ++INP DLP+ K L +WY + G ++
Sbjct: 201 -----GTVVALRQLKVGSFHGVPFSSTYQTKIDINPTDLPDVKKLATWYVTTGGANVMSL 255
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
S +GA G +S R +L I SD KP + + + + K D WY AC
Sbjct: 256 SSQGLGAASGAGGESDRG-RKYLDEIQSDGIGRGLKPEYVDVRCVPIYFKQDAQ-WYDAC 313
Query: 865 TTCNKKVTE--AFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
TCNKKVTE A G + CE C K + RY++ I+++D +AW+++FNE + G
Sbjct: 314 PTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAGIEFFG 372
Query: 691 CSADELDRIRKEEGDDSYVLKLKE 620
A EL R +E D Y+ KL +
Sbjct: 373 MEAAELKRRAQE--DPLYIAKLAQ 394
>emb|CAJ05550.1| replication factor A, 51kDa subunit, putative [Leishmania major]
Length = 467
Score = 156 bits (394), Expect = 3e-36
Identities = 110/324 (33%), Positives = 169/324 (52%), Gaps = 6/324 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF---LPPVQYNLVKIDQLGPYVGG 1403
S G ++ AN++F V NDYEL+ + ++ + A +T LP +YN V I+ L G
Sbjct: 84 SGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPMQRYNFVPIELLKQREVG 143
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
LVD++GVV V S+ +K + KR++ + D + V ++ WND A +
Sbjct: 144 -SLVDVLGVVLKVDEVSSITQKSTGRELMKRNVKMGDMTA-AVEVTFWNDEAKAWCYPV- 200
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP 1046
VVA++ LKV F GV+LS+ ++ ++INP DLP+ K L +WY + G +
Sbjct: 201 -----GTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPDVKKLATWYVATGGANVTSL 255
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
S +GA G +S R +L I S+ KP + + + + K D WY AC
Sbjct: 256 SSQGLGAASGAGGESDRG-RKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQ-WYDAC 313
Query: 865 TTCNKKVTE--AFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
TCNKKVTE A G + CE C K + RY++ I+++D +AW+++FNE + G
Sbjct: 314 PTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAGIEFFG 372
Query: 691 CSADELDRIRKEEGDDSYVLKLKE 620
A EL R +E D Y+ KL +
Sbjct: 373 MEAAELKRRAQE--DPLYIAKLAQ 394
>gb|AAK84867.1| replication protein A subunit 1 [Leishmania infantum]
Length = 467
Score = 153 bits (387), Expect = 2e-35
Identities = 109/324 (33%), Positives = 168/324 (51%), Gaps = 6/324 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF---LPPVQYNLVKIDQLGPYVGG 1403
S G ++ AN++F V NDYEL+ + ++ + A +T LP +YN V I+ L G
Sbjct: 84 SGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPMQRYNFVPIELLKQREVG 143
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
LVD++GVV V S+ +K + KR++ + D + V ++ WND A +
Sbjct: 144 -SLVDVLGVVLKVDEVSSITQKSKGRELVKRNVKMGDMTA-AVEVTFWNDEAKAWCYPV- 200
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP 1046
VVA++ LKV F GV+LS+ ++ ++INP DL + K L +WY + G +
Sbjct: 201 -----GTVVALRQLKVGSFDGVTLSSTYKTKIDINPTDLADVKKLATWYVTTGGANVTSL 255
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
S +GA G +S R +L I S+ KP + + + + K D WY AC
Sbjct: 256 SSQGLGAASGAGGESDRG-RKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQ-WYDAC 313
Query: 865 TTCNKKVTE--AFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
TCNKKVTE A G + CE C K + RY++ I+++D +AW+++FNE + G
Sbjct: 314 PTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVTDNVSQAWLTLFNEAGIEFFG 372
Query: 691 CSADELDRIRKEEGDDSYVLKLKE 620
A EL R +E D Y+ KL +
Sbjct: 373 MEAAELKRRAQE--DPLYIAKLAQ 394
>ref|XP_786722.1| PREDICTED: similar to replication protein A1 [Strongylocentrotus
purpuratus]
Length = 305
Score = 151 bits (381), Expect = 9e-35
Identities = 94/309 (30%), Positives = 158/309 (51%), Gaps = 6/309 (1%)
Frame = -1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
+++GV +S S +V K N + KR + + DDS K V+++LW G+E D
Sbjct: 3 NVIGVCKSTSDLTAVTIKSSNREVNKRSLQLVDDSQKEVSLTLW-------GKEAEDFDG 55
Query: 1210 S-SPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
S +PV+A+K ++S F G SLS + S ++NPD+P+A +LK W+DSEG IS
Sbjct: 56 SGNPVIAVKGARLSGFGGRSLSVLQNSIFQVNPDIPKAHHLKGWFDSEGHSQDSQSISTR 115
Query: 1033 VGATRAGGFKSMYSDRVFLSHITSDPAMGQ-EKPVFFSLYAIISHIKPDQNMWYRACTT- 860
G+ GG + + H +GQ EKP +F++ I ++ +N Y AC +
Sbjct: 116 QGSGGGGGANTNW----MTFHDVHAQNLGQGEKPDYFTVKGTILFVR-KENCMYMACPSA 170
Query: 859 -CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
CNKKV+E Y CE C K+ R ++ ++D T W + F E AE+++ SA
Sbjct: 171 ECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQLLLKSA 230
Query: 682 DELDRIRK--EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAA 509
EL ++ E + + ++A ++ ++FR+ + Y E R + T P++
Sbjct: 231 QELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQPINVRD 290
Query: 508 ESKYLLEEI 482
+ L+++I
Sbjct: 291 YTNKLIKDI 299
>ref|XP_819019.1| replication factor A, 51kDa subunit [Trypanosoma cruzi strain CL
Brener]
gb|EAN97168.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 146 bits (369), Expect = 2e-33
Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 5/324 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAE--GETFLPPVQYNLVKIDQLGPYVGG 1403
+S G ++ AN++F V NDYEL+ + ++ + A +P +YN + I L G
Sbjct: 83 LSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPSSATIPLQRYNFLPIAILKQREVG 142
Query: 1402 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
LVD++ VV SV S+ +K + KR++ V D + V ++LWND A
Sbjct: 143 -SLVDVLAVVLSVEELSSITQKSTGRELIKRNVKVGDITA-AVEVTLWNDQAKEWAYS-- 198
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
V+A++ LKV F GV+LS +S ++NP++P+ K L WY S G +
Sbjct: 199 ----PGTVLAMRQLKVGSFDGVTLSATFQSAFDVNPNIPDVKKLAEWYISTGGRDVSSLS 254
Query: 1042 SAEVGA-TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
S VGA AGG Y R + I+++ K F + + ++K D WY AC
Sbjct: 255 SLGVGAGNNAGG--ENYRGRKYFDDISAEGLGRGPKADFIDVRCVPVYLKQDA-QWYDAC 311
Query: 865 TTCNKKVT--EAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
CNKKVT A G Y CE C + + RY++ I+ SD + W+++FNE + G
Sbjct: 312 PQCNKKVTLEGAQGERYRCEKCDRQVVP-TQRYLVSIQASDNVSQKWLTLFNEAGVEFFG 370
Query: 691 CSADELDRIRKEEGDDSYVLKLKE 620
A EL +++E D +V K+ +
Sbjct: 371 MPATELK--KQQEADPMFVTKIAQ 392
>ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma brucei TREU927]
gb|EAN79866.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei]
Length = 463
Score = 145 bits (365), Expect = 6e-33
Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 14/372 (3%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEG--ETFLPPVQYNLVKIDQLGPYVGGR 1400
S G ++ AN++F V NDYELS + + A + +P +YN V I L G
Sbjct: 84 SGGQVKNANRKFSNVNNDYELSFDNTCQISAARDVVSSSIPLQRYNFVPIAILKQREVG- 142
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
LVD++ VV +V ++ ++ + +R + VAD + + ++LWN+ A +
Sbjct: 143 SLVDVLAVVLNVEELGTIVQRSTGRELVRRTVKVADSTAG-IDVTLWNENAKEWPHQ--- 198
Query: 1219 MVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSE-GKDTSLAPI 1043
V+A++ LKV F GV+LST +S+ ++NP++P+ K L+ W++S G+D S +
Sbjct: 199 ---PGTVLAMRQLKVGSFDGVTLSTTMQSSFDVNPNIPDVKKLREWFESTGGRDVSSLSM 255
Query: 1042 SAE--VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRA 869
+G +G Y ++ IT++ KP + L + ++K D WY A
Sbjct: 256 QGNNALGLASSG---ETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQD-TQWYDA 311
Query: 868 CTTCNKKV--TEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
C CNKKV A G + CE C ++ + RY++ I+++D + W+++FNE +
Sbjct: 312 CPQCNKKVMLEGAMGDRFRCEKCDQSIVP-TQRYLVSIQVTDNVSQVWLTLFNESGAEFF 370
Query: 694 GCSADELDRIRKEEGDDSYVLKLKEATW-VPHLFRVSVTQHEY-MNEKRQR-----ITVR 536
G +A EL R++E D +V K+ + P L R+ V + NE +R + +
Sbjct: 371 GMTAPELK--RRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGGNEDSERVRLNVVRIT 428
Query: 535 GEAPVDFAAESK 500
P+D E K
Sbjct: 429 EFMPLDTVTEDK 440
>gb|AAB63407.1| Hypothetical protein F18A1.5 [Caenorhabditis elegans]
ref|NP_495606.1| F18A1.5 [Caenorhabditis elegans]
sp|Q19537|RFA1_CAEEL Probable replication factor A 73 kDa subunit (RP-A) (RF-A)
(Replication factor-A protein 1)
Length = 655
Score = 142 bits (357), Expect = 5e-32
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 5/366 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+S GS++ ANK+F +DYE++L ++I+E P + VK+ ++ Y G +
Sbjct: 295 LSGGSVKQANKKFNNTGHDYEITLRSDSIIEAGGELLAAPKLILKRVKLGEIAGYAG--Q 352
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
L+D++ VV+ + P + +++ KR++ + D+SG V ++LW D AT +
Sbjct: 353 LIDVLVVVEKMDPEATEFTSKAGKSLIKREMELIDESGALVRLTLWGDEATKA------L 406
Query: 1216 VDS--SPVVAIKSLKVSDFQG-VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
VD V+A K + +F G SL T + + P++ L WY + T +
Sbjct: 407 VDDYVQKVIAFKGVIPREFNGGFSLGTGSATRIISVPEIAGVSELYDWYANVKPTTEVKM 466
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
+S G + + R +K + ++ A+I+ + P N YR C
Sbjct: 467 MSQAAGGSNE-------APRTIAGLQEMQFGKDSDKGDYATVKAMITRVNPT-NALYRGC 518
Query: 865 TT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
+ C KK+ G Y CE C KN ++ Y+M +LSD TG+ +V+ F + A KI+G
Sbjct: 519 ASEGCQKKLVGENGD-YRCEKCNKNMNKFKWLYMMQFELSDETGQVYVTAFGDSAAKIVG 577
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFA 512
SA EL + +E D Y + +VP ++R+ Y E RQ++TV G VD
Sbjct: 578 KSAAELGELH-DESPDEYNAIFERLQFVPKMWRLRCKMDSYNEEVRQKMTVYG---VDDV 633
Query: 511 AESKYL 494
+ KY+
Sbjct: 634 NQDKYI 639
>ref|XP_680439.1| replication factor a protein [Plasmodium berghei strain ANKA]
emb|CAI04746.1| replication factor a protein, putative [Plasmodium berghei]
Length = 1169
Score = 137 bits (345), Expect = 1e-30
Identities = 103/398 (25%), Positives = 200/398 (50%), Gaps = 24/398 (6%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAE-GETFLPPVQYNLVKIDQLGP 1415
G+ ++SKG+++ ANK+F T+K+D E++L+EN+I+E E + +P YN I+++
Sbjct: 775 GKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYPINEIKA 834
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
+ LVD++GVV S + K + K+D+++ D++ +T+ ++LW + A
Sbjct: 835 NLNTGTLVDVIGVVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGENAVK-- 892
Query: 1234 QELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT- 1058
E +++ ++ ++ K LKV ++QG L + ++ +EINP+L +A LK+W+ + K+
Sbjct: 893 MEEMNITENC-IICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWINNKKNVY 951
Query: 1057 ---SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQ 887
+L ++ K++ + ++ + G K + F+ + I HI +
Sbjct: 952 NTINLTTTTSNNNMLNLESQKTIQEIKKNVNLANEEVLSG--KGIIFTTFGFIDHIY-NA 1008
Query: 886 NMWYRACTTCNKKVT------------EAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPT 743
Y AC CNKK+ + +C C KN+ Y + +K++D T
Sbjct: 1009 IPVYSACPNCNKKMVATVIEDGEEDMDQNVSESMYCAKCNKNNIPV-YNYSINLKITDNT 1067
Query: 742 GEAWVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYVLKLKEATWVPHLFRVSVTQ 578
VS F A+ I+ G SA+E ++R+E E +++ L +++A FR+
Sbjct: 1068 DSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDL-IEKAKLNEFFFRIKAYM 1126
Query: 577 HEYMNEKRQRITVRGEAPVD--FAAESKYLLEEIAKLT 470
+M+E ++ T+ P+ +YL++EI T
Sbjct: 1127 TSHMDEIKKNYTILETIPLSKLLVDSCRYLIKEIKLAT 1164
>ref|XP_724343.1| replication A protein [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA15908.1| putative replication A protein [Plasmodium yoelii yoelii]
Length = 1168
Score = 137 bits (344), Expect = 2e-30
Identities = 102/398 (25%), Positives = 199/398 (50%), Gaps = 24/398 (6%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVE-EAEGETFLPPVQYNLVKIDQLGP 1415
G+ ++SKG+++ ANK+F T+K+D E++L+EN+I+E E + +P YN I ++
Sbjct: 774 GKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYSISEIKA 833
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
+ LVD++G+V S + K + K+D+++ D++ +T+ ++LW + A
Sbjct: 834 NMNTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGENAVK-- 891
Query: 1234 QELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT- 1058
E +++ ++ ++ K LKV ++QG L + ++ +EINP+L +A LK+W+ + K+
Sbjct: 892 MEEMNITENC-IICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWVNNKKNVY 950
Query: 1057 ---SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQ 887
+L ++ K++ + ++ + G K + F+ + I HI +
Sbjct: 951 NTINLTTTTSNNNMLNLESQKTIQEIKKNVNLANEEVLSG--KGIIFTTFGFIDHIY-NA 1007
Query: 886 NMWYRACTTCNKKVT------------EAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPT 743
Y AC CNKK+ + +C C KN+ Y + +K++D T
Sbjct: 1008 IPVYSACPNCNKKMVATVIEDGEQDMDQNVSESMYCAKCNKNNIPV-YNYSINLKITDNT 1066
Query: 742 GEAWVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYVLKLKEATWVPHLFRVSVTQ 578
VS F A+ I+ G SA+E ++R+E E +++ L +++A FR+
Sbjct: 1067 DSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDL-IEKAKLNEFFFRIKAYM 1125
Query: 577 HEYMNEKRQRITVRGEAPVD--FAAESKYLLEEIAKLT 470
+M+E ++ T+ P+ +YL++EI T
Sbjct: 1126 TSHMDEIKKNYTILETIPLSKLLVDNCRYLIKEIKLAT 1163
>ref|XP_702119.1| PREDICTED: hypothetical protein XP_697027 [Danio rerio]
Length = 558
Score = 136 bits (343), Expect = 2e-30
Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 3/317 (0%)
Frame = -1
Query: 1408 GGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLW-NDLATTTGQ 1232
G R + ++GV ++ + K E + KR+I + D SG+ + +++W +D T G
Sbjct: 256 GERHHLHVIGVCKNAEDVARIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDAETFDGS 314
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
P++AIK ++SDF G SLST+ ST+ INPD+PEA L+ WYD EG
Sbjct: 315 -------GQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHALD- 366
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
E+ GG + + L+ + ++ +K +FS A I +I+ +N Y+
Sbjct: 367 GQSMTELRGPGGGGNTNWKT----LAEVKNEHLGHGDKADYFSCIATIVYIR-KENCLYQ 421
Query: 871 ACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
AC + CNKKV + + CE C K + R ++ ++D WV+ F + AE +
Sbjct: 422 ACPSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDTAETL 481
Query: 697 IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
+G ++ L ++ K+ + ++ + A + +FR V Y +E R ++TV PVD
Sbjct: 482 LGQNSSYLGQL-KDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVD 540
Query: 517 FAAESKYLLEEIAKLTA 467
SK L+ I KL A
Sbjct: 541 HREYSKRLIINIRKLAA 557
>dbj|BAE02429.1| unnamed protein product [Macaca fascicularis]
Length = 268
Score = 136 bits (342), Expect = 3e-30
Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 4/277 (1%)
Frame = -1
Query: 1294 DDSGKTVTISLWNDLATTTGQELLDMVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEI 1121
D SGK VT +LW D A D D S PV+AIK +VSDF G SLS + ST+
Sbjct: 2 DTSGKVVTATLWGDDA--------DKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIA 53
Query: 1120 NPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQE 941
NPD+PEA L+ W+D+EG+ A + ++GG ++ L + S+ +
Sbjct: 54 NPDIPEAYKLRGWFDAEGQ----ALDGVSISDLKSGGVGGGNTNWKTLYEVKSENLGQGD 109
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIM 767
KP +FS A + +++ +N Y+AC T CNKKV + Y CE C R I+
Sbjct: 110 KPDYFSSVATVVYLR-KENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMIL 168
Query: 766 VIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVS 587
+ ++D WV+ F E AE I+G +A L + K++ + ++ + A + +FRV
Sbjct: 169 SVNIADFQENQWVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVR 227
Query: 586 VTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
V Y +E R + +V PVD+ + L+ I +
Sbjct: 228 VKVETYNDESRIKASVMDVKPVDYREYGRRLVLSIRR 264
>emb|CAI74881.1| replication factor-a protein 1, putative [Theileria annulata]
ref|XP_952613.1| replication factor-A protein 1 [Theileria annulata strain Ankara]
Length = 625
Score = 135 bits (339), Expect = 6e-30
Identities = 95/385 (24%), Positives = 175/385 (45%), Gaps = 12/385 (3%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +S G L+ ANK++ +K+ EL L+E++ ++ + + +P Y+ +DQL
Sbjct: 253 GQVYSISGGQLKPANKRYNNLKHSCELILDESSYIQLFQNDESIPSFCYSFTPLDQLQDI 312
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
G E +D++ +V + + K + KRD ++ D + TV ++ W
Sbjct: 313 KSG-ETIDVIAIVVTARDLQKINNKATGNNVEKRDFLLCDSTNTTVWVTSWGQKTQLFNY 371
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
E +S P+V +K +KV ++QG L + + P +PEA L+ W++ G + +
Sbjct: 372 E---GDNSHPLVCLKGVKVGEWQGKKLDVQISTQVICEPVIPEALKLRKWWNENGHNINF 428
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMG------QEKPVFFSLYAIISHIKPD 890
+ + + ++ +SHI S G + F+ +I +K D
Sbjct: 429 KQETVKTN-------NNFFNKLCTISHIISSTNQGLQFKSIDSNGMVFTTRGLIEVLK-D 480
Query: 889 QNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
N + +CT C KK++ G Y C C + + L YI+ IK+ D + W S +
Sbjct: 481 TNFCFPSCTGCRKKMSNDQGCWY-CSKCNSSTNPIHL-YILNIKIVDESSHIWASAMADV 538
Query: 709 AEKIIGCSADEL----DRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRIT 542
E I+G A L +R E + S++ ++A ++F++ T +M+E R +
Sbjct: 539 GESIMGIKAYNLINLMERGPSNENEKSFINYFEDARLTEYIFKIKATVENFMDEPRIKYR 598
Query: 541 VRGEAPVDFAAE--SKYLLEEIAKL 473
V P+D + K +E I KL
Sbjct: 599 VLKATPLDRELDLAIKDRIENIKKL 623
>emb|CAB62873.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
ref|NP_702753.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
Length = 1145
Score = 133 bits (334), Expect = 2e-29
Identities = 106/397 (26%), Positives = 195/397 (49%), Gaps = 22/397 (5%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKIDQLGP 1415
G+ ++SKG +++ANK+F T+ +DYE++L+EN+++E + E +P YN + ID +
Sbjct: 751 GKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDEENENIPKYNYNFISIDNIKN 810
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
G VDI+ VV + + + K + KRD+ + D+S T+ ++LW AT
Sbjct: 811 MNTG-SFVDIIAVVLNYQEKMQIFVKKTGQYKDKRDVTLIDESFDTIQVTLWEKNATIID 869
Query: 1234 QELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPD-LPEAKNLKSWYDSEGKDT 1058
+ +++ D+ +V K LK+ ++QG L + R+ +EINPD + +A LK+W+ K
Sbjct: 870 E--MNLRDNC-IVCFKYLKIGEWQGKKLESHARTKIEINPDNIEKAYILKNWW-IHNKKM 925
Query: 1057 SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMW 878
I+ K++ + ++ + + G K + F+ Y I I + +
Sbjct: 926 ICNSINLSSNYINIETQKTIQEIKKNVNLVNEEALSG--KGIMFTTYGFIDQIYNNMPV- 982
Query: 877 YRACTTCNKKV-------------TEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGE 737
Y AC CNKK+ + +C C KN+ Y + +K++D T
Sbjct: 983 YSACPDCNKKMISNSVDDNEYEPSSNLLEETMYCAKCNKNNIPV-YNYYINLKITDSTDS 1041
Query: 736 AWVSVFNEHAEKII-GCSADELDRIRKE----EGDDSYVLKLKEATWVPHLFRVSVTQHE 572
S F A+ I+ G SA+E ++R+E E +++ + +++ FR+ V
Sbjct: 1042 IRASAFANCAKIIMNGLSAEEYMKLRQEYIMQENIENFDI-IEKIKLNEFFFRIKVYMTS 1100
Query: 571 YMNEKRQRITVRGEAPVD--FAAESKYLLEEIAKLTA 467
+M+E ++ T+ APV +YL++ I LT+
Sbjct: 1101 HMDELKKNYTIIDIAPVGKLLIDNCRYLIKSIKNLTS 1137
>pdb|1FGU|B Chain B, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
pdb|1FGU|A Chain A, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
Length = 252
Score = 131 bits (330), Expect = 7e-29
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 78 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSL 136
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + + +N + KR+I + D SGK VT +LW + A D
Sbjct: 137 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA--------DKF 188
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGK 1064
D S PV+AIK +VSDF G SLS + ST+ NPD+PEA L+ W+D+EG+
Sbjct: 189 DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ 240
>pdb|1JMC|A Chain A, Single Stranded Dna-Binding Domain Of Human Replication
Protein A Bound To Single Stranded Dna, Rpa70 Subunit,
Residues 183 - 420
Length = 246
Score = 131 bits (330), Expect = 7e-29
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 82 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSL 140
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + + +N + KR+I + D SGK VT +LW + A D
Sbjct: 141 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA--------DKF 192
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGK 1064
D S PV+AIK +VSDF G SLS + ST+ NPD+PEA L+ W+D+EG+
Sbjct: 193 DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ 244
>emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae]
emb|CAA10310.1| F18A1.5 protein [Caenorhabditis briggsae]
emb|CAE67510.1| Hypothetical protein CBG13026 [Caenorhabditis briggsae]
Length = 658
Score = 129 bits (323), Expect = 5e-28
Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 5/351 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE 1397
+S GS+R ANK+F +DYE++L +++VE P + V + ++ + G E
Sbjct: 295 LSGGSVRQANKKFNNTGHDYEITLRNDSVVEAGGELLAAPKLNLKRVSLAEIAGHCG--E 352
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
++D++ +V+ + + +T+ KR++ + D+S V ++LW D A
Sbjct: 353 MIDVLVIVEKMDAEATEFTSKAGKTLTKREMELIDESQALVRLTLWGDEAIKAN------ 406
Query: 1216 VDS--SPVVAIKSLKVSDFQG-VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
VD V+A K + +F G SL T + + P++ L WY +E + L
Sbjct: 407 VDDYHGKVIAFKGVIPREFNGGYSLGTGSGTRIIPVPEISGVSELYDWYTTEKPHSELKL 466
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
IS +GG + R +K + S+ A+I+ I P+ + Y+ C
Sbjct: 467 ISQT-----SGGMSE--APRTIAGLQEMQFGKDSDKGDYASVKAMITRINPNSAL-YKGC 518
Query: 865 TT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
+ C KKV E+ G Y CE C K+ ++ Y+M +LSD TG+ +V+ F + A K++G
Sbjct: 519 ASEGCQKKVIESDGE-YRCEKCNKSMNKFKWLYMMQFELSDETGQVYVTAFGDSAAKVVG 577
Query: 691 CSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITV 539
+A E+ + K+E + Y + +VP ++R+ Y E RQ++TV
Sbjct: 578 KTAQEVGDL-KDENLNEYNATFERLQFVPKMWRLRCKMETYNEEVRQKMTV 627
>ref|XP_764664.1| replication factor A protein [Theileria parva strain Muguga]
gb|EAN32381.1| replication factor A protein, putative [Theileria parva]
Length = 458
Score = 126 bits (317), Expect = 2e-27
Identities = 89/356 (25%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +S G L+ ANK+F +K+ EL L+E++ ++ + + +P Y+ +DQL
Sbjct: 109 GQVYSISGGQLKPANKRFNNLKHTCELILDESSHIQLFQNDESIPSFCYSFTPLDQLQDV 168
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
G E +D++ +V + + K + KRD ++ D + TV ++ W
Sbjct: 169 KSG-ETIDVIAIVVTAKDVQKINNKSTGNNVEKRDFLLCDSTNTTVWVTSWGQKTQLFNY 227
Query: 1231 ELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
+ +S P+ V ++QG L G + + P +PEA L+ W++ ++ +
Sbjct: 228 Q---GENSHPL-------VGEWQGKKLDVQGSTQVICEPVIPEALKLRKWWNENSQNVN- 276
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMG------QEKPVFFSLYAIISHIKPD 890
EV T F + + +SHI S G + F+ A+I +K D
Sbjct: 277 --FQQEVSKTTNSTFNKLCT----ISHIISSTNQGLQFKSIDSNGMVFTTRALIEVLK-D 329
Query: 889 QNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
N + +CT C KK+T G Y C C + + L YI+ IK+ D T W + ++
Sbjct: 330 TNFCFPSCTGCRKKMTNDQGIWY-CPKCNSSTNPVHL-YILNIKIVDETSHIWATAMSDV 387
Query: 709 AEKIIGCSADELDRIRK----EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKR 554
E I+G A +L ++ + +E + ++V ++A ++F++ T +M+E R
Sbjct: 388 GESIMGIKAYKLIKLMENGPSDENEKNFVNYFEDARLTEYIFKIKATVENFMDEPR 443
>gb|AAP92635.1| Cb1-727 [Rattus norvegicus]
ref|XP_213389.3| PREDICTED: similar to Cb1-727 [Rattus norvegicus]
Length = 680
Score = 121 bits (303), Expect = 1e-25
Identities = 71/167 (42%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E LP VQ++ I L L
Sbjct: 245 SKGTLKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPTVQFDFTGIGDLESK-SKDSL 303
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VDI+G+ +S + K +N + KR+I + D SGK VT +LW + A D
Sbjct: 304 VDIIGICKSYEDATKITVKSNNREVAKRNICLMDMSGKVVTATLWGEDA--------DKF 355
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWY 1079
D S PV+AIK +VSDF G SLS + ST+ +NPD+PEA L+ W+
Sbjct: 356 DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVLVNPDIPEAYKLRGWH 402
Score = 75.9 bits (185), Expect = 5e-12
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Frame = -1
Query: 1081 YDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISH 902
+DSEG+ A + R+GG ++ L S+ +K +FS A +
Sbjct: 473 FDSEGQ----ALDGVSISDLRSGGTGGSNTNWKTLYEAKSENLGQGDKADYFSTVATVVF 528
Query: 901 IKPDQNMWYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWV 728
++ + N Y+AC T CNKKV + Y CE C + R I+ + ++D WV
Sbjct: 529 LRKE-NCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWV 587
Query: 727 SVFNEHAEKIIGCSADELDRIRKEEG-------DDSYVLKLKEATWVPHLFRVSVTQHEY 569
+ F E AE I+G + L ++++ G + ++ + A + FR+ V Y
Sbjct: 588 TCFQESAEAILGQNTVYLGELKEKVGCVFVSMNEQAFEEVFQNANFRSFTFRIRVKLETY 647
Query: 568 MNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
+E R + TV PVD+ SK L+ I K
Sbjct: 648 NDESRIKATVIDVKPVDYRDYSKRLIMNIRK 678
>ref|XP_667409.1| replication protein A large subunit [Cryptosporidium hominis TU502]
gb|EAL37178.1| replication protein A large subunit [Cryptosporidium hominis]
Length = 473
Score = 120 bits (302), Expect = 1e-25
Identities = 96/383 (25%), Positives = 176/383 (45%), Gaps = 23/383 (6%)
Frame = -1
Query: 1555 IANKQFKTVKNDYELSLNENAIVEEAEGETF----LPPVQYNLVKIDQLGPYVGGRELVD 1388
++N +F N YE++ ++ V + E + P ++ VK + P +VD
Sbjct: 80 VSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKYVFSTVKDIREIPVPS---IVD 136
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++G+V+ SP+ V + +N+ + +R I V D +G + I+LW +LA + ++ L
Sbjct: 137 LIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINITLWGELAEVSDEKFL----G 192
Query: 1207 SPVVAIKSLKVSDFQGVSLSTI-GRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+PVVA+KS+++ ++QG ST+ GRS +E + D + + L+ WYDS G IS
Sbjct: 193 NPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELRDWYDSIGSSIKFESISNIS 252
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVF-----FSLYAIISHI----------- 899
F+ +D+++ D E F F + A IS I
Sbjct: 253 SNESPNNFR--VNDKLYSGRTLKDIRNRMEDNEFSSTQSFQVIARISKIGSINVNQQVSG 310
Query: 898 KPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
++ Y AC C KKV F + Y CE C ++ +++ + + D T V F
Sbjct: 311 DKGGSLTYDACPICKKKV--LFSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCF 366
Query: 718 NEHAEKIIGCSADELDRIRKEEGDD--SYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRI 545
+E I + + ++ D +++L L + W + ++ + EY N+K+ R
Sbjct: 367 HEIGSTFIKELSASACKEMEQNNDKKLNFILNL-QCMWRHYNLKIQLKAEEYNNQKKTRA 425
Query: 544 TVRGEAPVDFAAESKYLLEEIAK 476
++ P+D S +LE I++
Sbjct: 426 IIQSAEPIDLNQISYLMLESISQ 448
>gb|AAD42062.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 473
Score = 120 bits (301), Expect = 2e-25
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 23/383 (6%)
Frame = -1
Query: 1555 IANKQFKTVKNDYELSLNENAIVEEAEGETF----LPPVQYNLVKIDQLGPYVGGRELVD 1388
++N +F N YE++ ++ V + E + P + VK + P +VD
Sbjct: 80 VSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKYVFTTVKDIREIPVPS---IVD 136
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++G+V+ SP+ V + +N+ + +R I V D +G + I+LW +LA + ++ L
Sbjct: 137 LIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINITLWGELAEVSDEKFL----G 192
Query: 1207 SPVVAIKSLKVSDFQGVSLSTI-GRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+PVVA+KS+++ ++QG ST+ GRS +E + D + + L+ WYDS G IS
Sbjct: 193 NPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELRDWYDSIGSSIKFESISNIS 252
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVF-----FSLYAIISHI----------- 899
F+ +D+++ D E F F + A IS I
Sbjct: 253 SNESPNNFR--VNDKLYSGRTLKDIRNRMEDNEFSSTPSFQVIARISKIGSINVNQQVSG 310
Query: 898 KPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
++ Y AC C KKV F + Y CE C ++ +++ + + D T V F
Sbjct: 311 DKGGSLTYDACPICKKKV--LFSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCF 366
Query: 718 NEHAEKIIGCSADELDRIRKEEGDD--SYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRI 545
+E I + + ++ D +++L L + W + ++ + EY N+K+ R
Sbjct: 367 HEIGSTFIKELSASACKEMEQNNDKKLNFILNL-QCMWRHYNLKIQLKAEEYNNQKKTRA 425
Query: 544 TVRGEAPVDFAAESKYLLEEIAK 476
++ P+D S +LE I++
Sbjct: 426 IIQSAEPIDLNQISYLMLESISQ 448
>ref|XP_626789.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa II]
gb|EAK89268.1| replication protein A1 large subunit [Cryptosporidium parvum]
Length = 484
Score = 120 bits (301), Expect = 2e-25
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 23/383 (6%)
Frame = -1
Query: 1555 IANKQFKTVKNDYELSLNENAIVEEAEGETF----LPPVQYNLVKIDQLGPYVGGRELVD 1388
++N +F N YE++ ++ V + E + P + VK + P +VD
Sbjct: 91 VSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKYVFTTVKDIREIPVPS---IVD 147
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++G+V+ SP+ V + +N+ + +R I V D +G + I+LW +LA + ++ L
Sbjct: 148 LIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINITLWGELAEVSDEKFL----G 203
Query: 1207 SPVVAIKSLKVSDFQGVSLSTI-GRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+PVVA+KS+++ ++QG ST+ GRS +E + D + + L+ WYDS G IS
Sbjct: 204 NPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELRDWYDSIGSSIKFESISNIS 263
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVF-----FSLYAIISHI----------- 899
F+ +D+++ D E F F + A IS I
Sbjct: 264 SNESPNNFR--VNDKLYSGRTLKDIRNRMEDNEFSSTPSFQVIARISKIGSINVNQQVSG 321
Query: 898 KPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
++ Y AC C KKV F + Y CE C ++ +++ + + D T V F
Sbjct: 322 DKGGSLTYDACPICKKKV--LFSTSY-CEKCDESVVP-ETKFLFPVTIEDHTCSLTVQCF 377
Query: 718 NEHAEKIIGCSADELDRIRKEEGDD--SYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRI 545
+E I + + ++ D +++L L + W + ++ + EY N+K+ R
Sbjct: 378 HEIGSTFIKELSASACKEMEQNNDKKLNFILNL-QCMWRHYNLKIQLKAEEYNNQKKTRA 436
Query: 544 TVRGEAPVDFAAESKYLLEEIAK 476
++ P+D S +LE I++
Sbjct: 437 IIQSAEPIDLNQISYLMLESISQ 459
>ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
gb|EAK90646.1| Rf-A (OB fold protein) [Cryptosporidium parvum]
Length = 707
Score = 117 bits (292), Expect = 2e-24
Identities = 82/337 (24%), Positives = 158/337 (46%), Gaps = 32/337 (9%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
S+G ++ AN +F T +++E+ NE+A ++ + +P +N V I ++ Y G+ L
Sbjct: 286 SRGDVKEANTRFNTTGHEFEIIFNEDAEIQSLPQDDRIPKKTFNFVPISEIRGYSKGQSL 345
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD-- 1220
D++G++ P ++ K KR++ + D SG ++ ++LW++ + LD
Sbjct: 346 -DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLTLWSE------RTHLDEG 398
Query: 1219 MVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPD-LPEAKNLKSWYDSEG----KDTS 1055
++ +PV+A+K+ V +F G L S++E NP + +++ LK+W+ S+ S
Sbjct: 399 LISQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELKNWFFSQSNLHESVVS 458
Query: 1054 LAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQ--EKPVFFSLYAIISHIKPDQNM 881
L+ S G T + S ++ TS + + ++ Y I I+ D
Sbjct: 459 LSSSSPSPGNTNSSSSAKRLSIDEIVATATSGSSSSDMLDGGIWVHTYGTIRSIR-DNKY 517
Query: 880 WYRACTTCNKKVTE----------------------AFGSGYWCEGCQKNDSECSLRYIM 767
++ +C C +KVTE + G Y C CQ++ +YI+
Sbjct: 518 YWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYIL 577
Query: 766 VIKLSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK 659
++ D TG F EH E I+ G S ++L+ +++
Sbjct: 578 SCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKE 614
>ref|XP_666551.1| replication protein A 70kDa [Cryptosporidium hominis TU502]
gb|EAL36324.1| replication protein A 70kDa [Cryptosporidium hominis]
Length = 686
Score = 117 bits (292), Expect = 2e-24
Identities = 82/337 (24%), Positives = 158/337 (46%), Gaps = 32/337 (9%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
S+G ++ AN +F T +++E+ NE+A ++ + +P +N V I ++ Y G+ L
Sbjct: 265 SRGDVKEANTRFNTTGHEFEIIFNEDAEIQSLPQDDRIPKKTFNFVPISEIRGYSKGQSL 324
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD-- 1220
D++G++ P ++ K KR++ + D SG ++ ++LW++ + LD
Sbjct: 325 -DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLTLWSE------RTHLDEG 377
Query: 1219 MVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPD-LPEAKNLKSWYDSEG----KDTS 1055
++ +PV+A+K+ V +F G L S++E NP + +++ LK+W+ S+ S
Sbjct: 378 LISQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELKNWFFSQSNLHESVVS 437
Query: 1054 LAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQ--EKPVFFSLYAIISHIKPDQNM 881
L+ S G T + S ++ TS + + ++ Y I I+ D
Sbjct: 438 LSSSSPSPGNTNSNSSAKRLSIDEIVATATSGSSSSDMLDGGIWVHTYGTIRSIR-DNKY 496
Query: 880 WYRACTTCNKKVTE----------------------AFGSGYWCEGCQKNDSECSLRYIM 767
++ +C C +KVTE + G Y C CQ++ +YI+
Sbjct: 497 YWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYIL 556
Query: 766 VIKLSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK 659
++ D TG F EH E I+ G S ++L+ +++
Sbjct: 557 SCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKE 593
>gb|AAW71479.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 688
Score = 115 bits (287), Expect = 7e-24
Identities = 81/337 (24%), Positives = 158/337 (46%), Gaps = 32/337 (9%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
S+G ++ AN +F T +++E+ +E+A ++ + +P +N V I ++ Y G+ L
Sbjct: 267 SRGDVKEANTRFNTTGHEFEIIFHEDAEIQSLPQDDRIPKKTFNFVPISEIRGYSKGQSL 326
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD-- 1220
D++G++ P ++ K KR++ + D SG ++ ++LW++ + LD
Sbjct: 327 -DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLTLWSE------RTHLDEG 379
Query: 1219 MVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPD-LPEAKNLKSWYDSEGK----DTS 1055
++ +PV+A+K+ V +F G L S++E NP + +++ LK+W+ S+ S
Sbjct: 380 LISQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELKNWFFSQSNLHESVVS 439
Query: 1054 LAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQ--EKPVFFSLYAIISHIKPDQNM 881
L+ S G T + S ++ TS + + ++ Y I I+ ++
Sbjct: 440 LSSSSPSPGNTNSSSSAKRLSIDEIVATATSGSSSSDMLDGGIWVHTYGTIRSIRDNKYY 499
Query: 880 WYRACTTCNKKVTE----------------------AFGSGYWCEGCQKNDSECSLRYIM 767
W +C C +KVTE + G Y C CQ++ +YI+
Sbjct: 500 W-SSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYIL 558
Query: 766 VIKLSDPTGEAWVSVFNEHAEKII-GCSADELDRIRK 659
++ D TG F EH E I+ G S ++L+ +++
Sbjct: 559 SCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKE 595
>emb|CAG08930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 103 bits (257), Expect = 2e-20
Identities = 71/197 (36%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SK +L+IANKQ+ +VKNDYE++LN + + E +P VQ + V I L
Sbjct: 222 GKVYYISKCTLKIANKQYTSVKNDYEMTLNGESTIIPCEDSCDVPLVQCDFVSISDLENK 281
Query: 1411 VGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG- 1235
+VD++GV +SV + + N + KR + + D SGK VT++LW + T
Sbjct: 282 EKDA-IVDVIGVCKSVDEATRLTTR-SNREVSKRTLHLMDMSGKLVTVTLWGEEVRTVRG 339
Query: 1234 ------------------------QELLDMVDSS--PVVAIKSLKVSDFQGVSLSTIGRS 1133
L + D S PVVAIK K+SDF G SLS S
Sbjct: 340 TSVRRSFTLLNIRMKTATRFPGRMNRLAENFDGSGEPVVAIKGAKLSDFGGRSLSASFSS 399
Query: 1132 TLEINPDLPEAKNLKSW 1082
TL INPD+PEA L+ W
Sbjct: 400 TLMINPDIPEAYKLRGW 416
>ref|XP_765009.1| replication factor A protein [Theileria parva strain Muguga]
gb|EAN32726.1| replication factor A protein, putative [Theileria parva]
Length = 466
Score = 102 bits (255), Expect = 4e-20
Identities = 94/382 (24%), Positives = 170/382 (44%), Gaps = 18/382 (4%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG++ ++NK+F T ++YE++ ++ ++ P + N +K+++ +V R++
Sbjct: 77 SKGTVNLSNKKFNTTPHNYEITFTTDSKID--------PSDELNDIKVERNYEFVTLRDI 128
Query: 1393 ----------VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLAT 1244
VDI+ V+S++P K + +T KR + V DD+ + ++LW +
Sbjct: 129 KSTSRDTPFVVDILCFVKSLTPVSVTNTKFNRDT-KKRLLYVVDDTSYELEVTLWGQMTE 187
Query: 1243 TT-GQELLDMVDSSPVVAIKSLKVSDFQGVSLST-IGRSTLEINPDLPEAKNLKSWYDSE 1070
+++LD V IK F SL+T I + + + L++WY
Sbjct: 188 LPIFEDILDKPVILSQVTIKEWNGGRFGQTSLNTDIKFADFQSVRNKDRLSTLEAWYQKA 247
Query: 1069 GKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIIS----H 902
+E + + ++M S R T D A+ + K F + + +
Sbjct: 248 ---------MSENESFKTMKTQTMSSSRESYEFTTIDDALTRSKGYFIFICKLRKLFWKN 298
Query: 901 IKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSV 722
+ +WY AC TC KKV E + + C C + LRYI+ D +G+ + +V
Sbjct: 299 KDGEMRLWYHACPTCLKKVVEEQENVWRCITCDDSIVTPVLRYIVSCVFVDFSGQLFSTV 358
Query: 721 FNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVS--VTQHEYMNEKRQR 548
++E +K++G S ELD + KEE ++ + F+VS Y E R
Sbjct: 359 YSESGKKLLGYSEQELDAMDKEELKNTLDFDVLHKD-----FKVSGFFKNKTYNGESRNT 413
Query: 547 ITVRGEAPVDFAAESKYLLEEI 482
V VD+A E++ LLE +
Sbjct: 414 FNVTNIEEVDYAKEAESLLERM 435
>gb|EAR92088.1| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila SB210]
Length = 713
Score = 101 bits (251), Expect = 1e-19
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 5/295 (1%)
Frame = -1
Query: 1549 NKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQ 1370
N + K D+ +++N+ + + + + +P ++ N I + G +L+D++ VV+
Sbjct: 349 NNNHQYNKGDHTVTVNKESKILICQEDPSIPMIKLNRQFIQDMQNKQKG-DLIDLIVVVK 407
Query: 1369 SVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAI 1190
+ + ++ K DN+ KRDI+ D+S I+LW + A + D ++
Sbjct: 408 ADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGETAKDYDAKQGD------IIVF 461
Query: 1189 KSLKVSDFQGVSLSTIGRST-LEINPD---LPEAKNLKSWYDSEGKDTSLAPISAEVGAT 1022
K K+ +F+ IG T + +NPD P+ ++K WY S D A+ T
Sbjct: 462 KDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQIHDVKKWYLSLNSDQLSTIQKAQGNDT 521
Query: 1021 RAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVT 842
S S L + E ++ + I +IK D ++Y AC +C KK+
Sbjct: 522 GPREVTSFESSLNILKEEIKNLQTDPEMKIWKEIRGQIMYIK-DTPLYYNACFSCKKKI- 579
Query: 841 EAFGSGYW-CEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
A + W C C K+ +E RYI+ + +SD T WVS F+E +KI+G D
Sbjct: 580 -ARNNEVWTCINCNKDFNEPDSRYILSLNISDSTDTIWVSAFDEVGQKILGVKGD 633
>emb|CAI74544.1| replication factor A-related protein, putative [Theileria annulata]
ref|XP_952276.1| hypothetical protein TA13200 [Theileria annulata strain Ankara]
Length = 466
Score = 93.2 bits (230), Expect = 3e-17
Identities = 92/385 (23%), Positives = 168/385 (43%), Gaps = 21/385 (5%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKGS+ ++NK+F ++YE++ + +++ P + + + +++ +V R++
Sbjct: 77 SKGSVNLSNKKFNNTPHNYEITFGTDGVID--------PSDELDDINVERNYEFVTLRDI 128
Query: 1393 ----------VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLAT 1244
VDI+ V+S++P K + +T KR + V DD+ + ++LW +
Sbjct: 129 KSTSRDTPFVVDILCFVKSLTPVSVTNTKFNRDT-KKRLLYVVDDTSYELEVTLWGQM-- 185
Query: 1243 TTGQELLDMVDSSPV----VAIKSLKVSDFQGVSLST-IGRSTLEINPDLPEAKNLKSWY 1079
T + D + PV V IK F SL+T I + + + L++WY
Sbjct: 186 -TELPIFDDILDKPVILSQVTIKEWNGGRFGQTSLTTDIKLADFQSVRNKDRLSTLEAWY 244
Query: 1078 DSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFF---SLYAII 908
+E + ++M S R T + AM + K F L +
Sbjct: 245 QKA---------MSENETFKTMKTQTMSSSRDSYEFSTIEDAMTRAKGYFTFNCKLRKLF 295
Query: 907 SHIKP-DQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAW 731
K D +WY +C C KKV E + + C C + LRYI+ D +G+
Sbjct: 296 WKNKDGDMRLWYHSCPNCYKKVVEEQENVWRCITCDDSIVTPVLRYIVTCVFVDFSGQMV 355
Query: 730 VSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVS--VTQHEYMNEK 557
+V++++ +K++G + ELD + KE+ ++ + F+VS Y E
Sbjct: 356 STVYSDNGKKLLGYTEQELDAMDKEQLKNTLDFDVLHRD-----FKVSGFFKNKTYNGES 410
Query: 556 RQRITVRGEAPVDFAAESKYLLEEI 482
R V VD+A E++ LLE++
Sbjct: 411 RNIFNVTNVEEVDYAKETELLLEKM 435
>ref|XP_636195.1| hypothetical protein DDB0188462 [Dictyostelium discoideum]
gb|EAL62688.1| hypothetical protein DDB0188462 [Dictyostelium discoideum]
Length = 679
Score = 87.8 bits (216), Expect = 1e-15
Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 26/363 (7%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIV 1382
++ ANK + T+ + ELS+N + V + +T P YN KI + + + VD++
Sbjct: 297 VKSANKLYNTLSHQSELSINSESRVMISPDQTQFTP-HYNFKKIADI-ENLEKNDTVDVI 354
Query: 1381 GVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSP 1202
G + ++ P ++ K E K I +ADD+ ++ + WN+ AT E+ V
Sbjct: 355 GAITNIDPIANLTSKQGKE-FTKFGITIADDTNASINVVFWNEKAT----EVAPQVKVGD 409
Query: 1201 VVAIKSLKVSDFQGVSLSTIGRSTLEINPD-LPEAKNLKSWYDSEGKDTSLAPISAEVGA 1025
++A+K +KVSDF G +LS S+ +N + L E NL++ + +++
Sbjct: 410 IIAMKGVKVSDFSGRTLSYSFGSSFGLNDEQLQETSNLRAHLQN-------FDVNSLQSL 462
Query: 1024 TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFS-------LYAII-------------- 908
T A + ++V L I + + P+F S LY I
Sbjct: 463 TIASSYTQSSYEQVNLP-IFLIRTISEGSPLFISDPKTNKKLYRTIGQFQRVVPLSQAGE 521
Query: 907 ----SHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTG 740
I Y+AC C K E GS C C +D E + Y M +KLSD
Sbjct: 522 MDKGDEISSKMEWKYKACKKCKKSCPE--GS---CPQCGSDDWEYA--YRMSLKLSDGDD 574
Query: 739 EAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNE 560
V V + +++ G SA EL ++ +E+ ++ + T + + + VS+ YM
Sbjct: 575 AISVEVMGKTGDRLFGKSAAELYQMNQEQINEIF------NTVLSNNYVVSLAPSSYMGS 628
Query: 559 KRQ 551
Q
Sbjct: 629 NGQ 631
>ref|XP_792076.1| PREDICTED: similar to replication protein A1 [Strongylocentrotus
purpuratus]
Length = 249
Score = 86.3 bits (212), Expect = 3e-15
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Frame = -1
Query: 1207 SPVVAIKSLKVSDFQGVSLSTIGRS-TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+PV+A+K ++S F G SLS + S T + P DS+ IS
Sbjct: 19 NPVIAVKGARLSGFGGRSLSVLQNSLTARVTPQ-----------DSQS-------ISTRQ 60
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQ-EKPVFFSLYAIISHIKPDQNMWYRACTT-- 860
G+ GG + + H +GQ EKP +F++ I ++ + N Y AC +
Sbjct: 61 GSGGGGGANTNW----MTFHDVHAQNLGQGEKPDYFTVKGTILFVRKE-NCMYMACPSAE 115
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKV+E Y CE C K+ R ++ ++D T W + F E AE+++ SA
Sbjct: 116 CNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQLLLKSAQ 175
Query: 679 ELDRIRK--EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAE 506
EL ++ E + + ++A ++ ++FR+ + Y E R + T P++
Sbjct: 176 ELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQPINVRDY 235
Query: 505 SKYLLEEI 482
+ L+++I
Sbjct: 236 TNKLIKDI 243
>ref|XP_511254.1| PREDICTED: replication protein A1, 70kDa [Pan troglodytes]
Length = 462
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/107 (41%), Positives = 62/107 (57%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SKG+L+IANKQF VKNDYE++ N V E + LP VQ++ ID L L
Sbjct: 258 SKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQFDFTGIDDL-ENKSKDSL 316
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWND 1253
VDI+G+ +S + + +N + KR+I + D SGK VT +LW +
Sbjct: 317 VDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGE 363
Score = 43.9 bits (102), Expect = 0.019
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = -1
Query: 733 WVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKR 554
WV+ F E AE I+G +A L + K++ + ++ + A + +FRV V Y +E R
Sbjct: 374 WVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESR 432
Query: 553 QRITVRGEAPVDFAAESKYLLEEIAK 476
+ TV PVD+ + L+ I +
Sbjct: 433 IKATVMDVKPVDYREYGRRLVMSIRR 458
>ref|XP_650233.1| replication factor A protein 1 [Entamoeba histolytica HM-1:IMSS]
gb|EAL44846.1| replication factor A protein 1, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 588
Score = 82.4 bits (202), Expect = 5e-14
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Frame = -1
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGR 1136
K + D S V + WN+ T +++ V + SLK+ +F+ +L+
Sbjct: 296 KVTLTFMDQSSYAVEVDFWNEDIDKTKD-----MENGVVYVLTSLKLKEFKYKTLTVTKA 350
Query: 1135 STLEINPDLPEA-------KNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFL 977
+ + N D+ + K ++ EG S A +D+++
Sbjct: 351 TKILSNTDIEQYDEASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDIRTADQLYC 410
Query: 976 SHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKN 797
+ + V ++Y + K D Y +C C KK+ E GS + CE CQK
Sbjct: 411 LRKLEEKTSETSEDVKANVYGYFTMFKVDNGFCYLSCPDCKKKIVE--GSTF-CEKCQK- 466
Query: 796 DSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEA 617
D + R+I+ ++D T WV++F+E +KIIG SADE+ I E+ + + K+
Sbjct: 467 DIQPMRRFIVRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEI-NEQDSELFENLFKQL 525
Query: 616 TWVPHLFRVSVTQHEYMNEKRQRITV 539
T++ F + + EY E R R TV
Sbjct: 526 TFIECRFHLICKKDEYNGETRTRFTV 551
>ref|XP_725495.1| replication protein A large subunit [Plasmodium yoelii yoelii str.
17XNL]
gb|EAA17060.1| replication protein A large subunit, putative [Plasmodium yoelii
yoelii]
Length = 487
Score = 81.6 bits (200), Expect = 8e-14
Identities = 87/400 (21%), Positives = 172/400 (43%), Gaps = 33/400 (8%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE- 1397
SKG + IAN ++ TVK+ YEL+ NE++ + E + + + +Q N+ ++ + +E
Sbjct: 79 SKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEI-KIQKNISLVNLRDIKIATKET 137
Query: 1396 --LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
D++G+V+ + P +++ K N+ I K++I++ DD+ + IS W+ ++L
Sbjct: 138 PFTADLIGIVKHICPPNNLKTKQGNDII-KQNIIIVDDTKHSFEISFWDSNVNLIEKDLK 196
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIG-RSTLE----INPDLPE-AKNLKSWYDSEGKD 1061
+ + + ++ + ++ + T G S++E +N +L E + WY++ GK
Sbjct: 197 E----NEIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKEKCLGISEWYNNNGKY 252
Query: 1060 TSLAP----ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKP 893
+S +V T + + V + +G+ K +++ +
Sbjct: 253 EQFTNMKNILSNDVIQTPDKHYALSDVNDVLTKISGTYTLVGRIKRIYW------KSKEN 306
Query: 892 DQNMWYRACTTCNKKVTEAFGSG------------------YWCEGCQKNDSECSLRYIM 767
+ +Y ACT C KK+ + Y C C +N+ + Y
Sbjct: 307 EHRFYYPACTKCKKKLLSSGQDNTQGGDYDNSNFNNEENCVYSCMNCDENNVKPFYNYTF 366
Query: 766 VIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYVLKLKEATWVPHLFR 593
D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 367 NFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDSLDYLFNYDFLYKEYKVV----- 421
Query: 592 VSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
V V+Q Y +R T P + ++ YLL EI L
Sbjct: 422 VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 460
>ref|XP_680462.1| replication factor A-related protein [Plasmodium berghei strain ANKA]
emb|CAH98106.1| replication factor A-related protein, putative [Plasmodium berghei]
Length = 514
Score = 81.3 bits (199), Expect = 1e-13
Identities = 87/400 (21%), Positives = 172/400 (43%), Gaps = 33/400 (8%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE- 1397
SKG + IAN ++ TVK+ YEL+ NE++ + E + + + +Q N+ ++ + +E
Sbjct: 107 SKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEI-KIQKNISLVNLRDIKIATKET 165
Query: 1396 --LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
D++G+V+ + P +++ K N+ I K++I++ DD+ + IS W+ ++L
Sbjct: 166 PFTADLIGIVKHICPPNNLKTKQGNDII-KQNIIIVDDTKHSFEISFWDSNVNLIEKDLK 224
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIG-RSTLE----INPDLPE-AKNLKSWYDSEGKD 1061
+ + + ++ + ++ + T G S++E +N +L E + WY++ GK
Sbjct: 225 E----NEIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKEKCLGISEWYNNNGKY 280
Query: 1060 TSLAP----ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKP 893
+S +V T + + V + +G+ K +++ +
Sbjct: 281 EQFTNMKNILSNDVIQTPDKHYALSDVNDVLAKISGTYTLVGRIKRIYW------KSKEN 334
Query: 892 DQNMWYRACTTCNKKVTEAFGSG------------------YWCEGCQKNDSECSLRYIM 767
+ +Y ACT C KK+ + Y C C +N+ + Y
Sbjct: 335 EHRFYYPACTKCKKKLLSSGQDSAQGVDYDNSNFNNEENCVYSCMNCDENNVKPFYNYTF 394
Query: 766 VIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYVLKLKEATWVPHLFR 593
D +G + F++ ++G A+EL + ++ D +Y KE V
Sbjct: 395 NFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDFLYKEYKVV----- 449
Query: 592 VSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
V V+Q Y +R T P + ++ YLL EI L
Sbjct: 450 VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 488
>ref|XP_745376.1| replication factor A-related protein [Plasmodium chabaudi chabaudi]
emb|CAH78783.1| replication factor A-related protein, putative [Plasmodium chabaudi]
Length = 482
Score = 79.3 bits (194), Expect = 4e-13
Identities = 90/408 (22%), Positives = 170/408 (41%), Gaps = 41/408 (10%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE- 1397
SKG + IAN ++ VK+ YEL+ NE++ + E + + + +Q N+ ++ + +E
Sbjct: 74 SKGRVSIANPKYNNVKHKYELTFNEDSEIHEVKDDGEI-KIQKNISLVNLRDIKIATKET 132
Query: 1396 --LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
D++G+V+ + P +++ K N+ I K++I++ DD+ + IS W+ ++L
Sbjct: 133 PFTADLIGIVKHICPPNNLKTKQGND-IVKQNIIIVDDTKHSFEISFWDSNVNLIEKDLK 191
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIG-RSTLEINPDL-PEAKN----LKSWYDSEGKD 1061
+ + + ++ + ++ + T G S++E +L E KN + WY++ GK
Sbjct: 192 E----NEIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKNKCLGISEWYNNNGKY 247
Query: 1060 TSLAPISAEVGATRAGGFKSMYSDRVFLS----HITSDPAMGQEKPVFFSLYAIISHIK- 896
K++ S+ V + + SD + Y ++ IK
Sbjct: 248 EQFT------------NMKNILSNDVIQTPDKHYAVSD--VNDVLGKISGTYTLVGRIKR 293
Query: 895 -------PDQNMWYRACTTCNKKVTEAFGSG------------------YWCEGCQKNDS 791
+ +Y ACT C KK+ + Y C C +ND
Sbjct: 294 IYWKSKENEHRFYYPACTKCKKKLLSSGQDNTQGMDYDNSNFNNDESCVYSCMNCDENDV 353
Query: 790 ECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYVLKLKEA 617
+ Y D +G + F++ ++G A+EL + ++ D +Y KE
Sbjct: 354 KPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDFLYKEY 413
Query: 616 TWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
V V V+Q Y +R T P + ++ YLL EI L
Sbjct: 414 KVV-----VRVSQKIYNGIERVNFTAMRIFPQKY-SDISYLLNEIQLL 455
>gb|AAH44372.1| Replication protein A1 [Danio rerio]
ref|NP_956105.1| replication protein A1 [Danio rerio]
Length = 381
Score = 78.6 bits (192), Expect = 7e-13
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPY 1412
G+ +SKG+L+IANKQF ++KNDYE++LN + E +P +Q + V I L
Sbjct: 239 GKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPCEDSNDVPMLQCDFVSIADL--- 295
Query: 1411 VGGRE---LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLW-NDLAT 1244
RE ++D++GV ++ + K E + KR+I + D SG+ + +++W +D T
Sbjct: 296 -ESREKDTILDVIGVCKNAEDVARIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDAET 353
Query: 1243 TTGQELLDMVDSSPVVAIKSLKVSDFQG 1160
G P++AIK ++SDF G
Sbjct: 354 FDG-------SGQPILAIKGARLSDFGG 374
>pdb|1L1O|F Chain F, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
pdb|1L1O|C Chain C, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 181
Score = 77.8 bits (190), Expect = 1e-12
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Frame = -1
Query: 952 MGQ-EKPVFFSLYAIISHIKPDQNMWYRACTT--CNKKVTEAFGSGYWCEGCQKNDSECS 782
+GQ +KP +FS A + +++ + N Y+AC T CNKKV + Y CE C
Sbjct: 18 LGQGDKPDYFSSVATVVYLRKE-NCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFK 76
Query: 781 LRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPH 602
R I+ + ++D WV+ F E AE I+G +A L + K++ + ++ + A +
Sbjct: 77 YRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANFRSF 135
Query: 601 LFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
+FRV V Y +E R + TV PVD+ + L+ I +
Sbjct: 136 IFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRR 177
>dbj|BAD87135.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD87224.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 609
Score = 77.4 bits (189), Expect = 2e-12
Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 22/380 (5%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGREL-V 1391
+++ AN+ ++ V ND+ + ++ +EE + P + ++L ++ VG V
Sbjct: 67 TVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPTITFSLTHFQEIPSLVGKNIFYV 126
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVAD-----------DSGKTVTISLWNDLAT 1244
DI+GV+ +S T VR + + KR + + D S T+ ++LW D +T
Sbjct: 127 DIMGVITEISSTSIVRPRSRDADSLKRTLQICDASYTNFTVNAKHSNSTLPVTLWGDRST 186
Query: 1243 TTGQELL--DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYD 1076
E + D VV V D+ G+ L+ G S + IN D+P+ LK
Sbjct: 187 AFDAEKIYKDGQTKPQVVVFVGTLVRDYAGIGLTITGSSPCKWYINLDIPDVLKLK---- 242
Query: 1075 SEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIK 896
E + PI A A + ++ + +P + K F + I I
Sbjct: 243 -ESFSVNFQPIKWVENAAPAFN-QDTPEEKTIKEILKLNP--HKYKRARFIVNVTIKSIH 298
Query: 895 PDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL-----RYIMVIKLSDPTGEAW 731
+ WY +C C + ++ +GS Y C C C + RY +V+ +D T EA
Sbjct: 299 DENCWWYNSCDRC-CRTSKPYGSTYRCSSC------CYIGMPVPRYKVVLTTADNTSEAA 351
Query: 730 VSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQ 551
+F A ++I + L +E D +++ ++ VS T+H KR
Sbjct: 352 FVLFGRIAHRLIHRPVESL---IEENPPDFIPAEIQALVDQAFVWNVSFTEH---TVKRN 405
Query: 550 RITVRGEAPVDFAAESKYLL 491
+ +++ + V A ++ L
Sbjct: 406 QESLQVNSIVSSGAPKQHFL 425
>ref|NP_914252.1| P0401G10.31 [Oryza sativa (japonica cultivar-group)]
Length = 501
Score = 76.6 bits (187), Expect = 3e-12
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 22/352 (6%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGREL-V 1391
+++ AN+ ++ V ND+ + ++ +EE + P + ++L ++ VG V
Sbjct: 119 TVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPTITFSLTHFQEIPSLVGKNIFYV 178
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVAD-----------DSGKTVTISLWNDLAT 1244
DI+GV+ +S T VR + + KR + + D S T+ ++LW D +T
Sbjct: 179 DIMGVITEISSTSIVRPRSRDADSLKRTLQICDASYTNFTVNAKHSNSTLPVTLWGDRST 238
Query: 1243 TTGQELL--DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYD 1076
E + D VV V D+ G+ L+ G S + IN D+P+ LK
Sbjct: 239 AFDAEKIYKDGQTKPQVVVFVGTLVRDYAGIGLTITGSSPCKWYINLDIPDVLKLK---- 294
Query: 1075 SEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIK 896
E + PI A A + ++ + +P + K F + I I
Sbjct: 295 -ESFSVNFQPIKWVENAAPAFN-QDTPEEKTIKEILKLNP--HKYKRARFIVNVTIKSIH 350
Query: 895 PDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL-----RYIMVIKLSDPTGEAW 731
+ WY +C C + ++ +GS Y C C C + RY +V+ +D T EA
Sbjct: 351 DENCWWYNSCDRC-CRTSKPYGSTYRCSSC------CYIGMPVPRYKVVLTTADNTSEAA 403
Query: 730 VSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQH 575
+F A ++I + L +E D +++ ++ VS T+H
Sbjct: 404 FVLFGRIAHRLIHRPVESL---IEENPPDFIPAEIQALVDQAFVWNVSFTEH 452
>ref|NP_919093.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC22296.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC16155.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 566
Score = 76.3 bits (186), Expect = 4e-12
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 6/295 (2%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETF-LPPVQYNLVKIDQLGPYVGGRE-LVD 1388
++ +NK ++ V N ++ + VE+ F P V Y L ++++ +V E VD
Sbjct: 67 VKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVD 126
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++G + +S +R K + + KR I + D + T+ +SLW + A E +
Sbjct: 127 VIGFITEISTPTMLRPKSRDASSLKRIIQICDANNSTLNVSLWAEQALAFDAESIHKAGQ 186
Query: 1207 SP--VVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
S +V ++ G+ L+ S + IN ++PE +LK+ + + L
Sbjct: 187 SEPQIVLFVGTLAKNYPGIGLALSRGSACKWYININVPEMVDLKNRIGANFQPIKL---- 242
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ A D+ + +P + + F I I D + WY +C
Sbjct: 243 --LQAPTTNIADENADDKTVRELLDMNPH--KNRRTRFQANVTIRKICNDSSWWYNSCEK 298
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
C +V + FG Y C GC N + RY + + D T +A +F + A++I+
Sbjct: 299 C-LRVVKPFGYTYKCTGCY-NIAMAVPRYKLSVLAGDDTADAVFILFGKIAQRIV 351
>emb|CAD51733.1| replication factor A-related protein, putative [Plasmodium falciparum
3D7]
ref|NP_704590.1| replication factor A-related protein, putative [Plasmodium falciparum
3D7]
Length = 484
Score = 74.7 bits (182), Expect = 1e-11
Identities = 86/399 (21%), Positives = 170/399 (42%), Gaps = 30/399 (7%)
Frame = -1
Query: 1573 SKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRE- 1397
SKG + IAN ++ TVK+ YEL+ NE++ + E + + + +Q + ++ + +E
Sbjct: 79 SKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEI-KIQKKISLVNLRDIKIATKET 137
Query: 1396 --LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 1223
D++G+V+ + +++ K N+ I K++I++ DD+ + IS W+ +E++
Sbjct: 138 PFTADLIGIVKHIGTVSNLKTKQGND-IAKQNIIIVDDTKHSFEISFWDSNVNLIKEEIV 196
Query: 1222 DMVDSSPVVAIKSLKVSDFQGVSLSTIG-RSTLE----INPDL-PEAKNLKSWYDSEGK- 1064
+ + + ++ + ++ + T G S++E +N +L + + WY++ GK
Sbjct: 197 E----NEIYIFTNINIRNWNDMKNGTFGVTSSIEKMENLNDELKAKCAKISQWYNNSGKY 252
Query: 1063 --DTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSD-PAMGQEKPVFFSLYAIISHIKP 893
T++ I + S+ LS I+ +G+ K +++ +
Sbjct: 253 EQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYW------KSKEN 306
Query: 892 DQNMWYRACTTCNKKV---------------TEAFGSGYWCEGCQKNDSECSLRYIMVIK 758
+ +Y AC C KK+ E Y C C +N+ + Y
Sbjct: 307 EHRFYYPACMKCKKKLLSSGHDNNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFL 366
Query: 757 LSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD--DSYVLKLKEATWVPHLFRVSV 584
D +G + F++ ++G A+EL + ++ D +Y KE V V V
Sbjct: 367 FMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIV-----VRV 421
Query: 583 TQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKLTA 467
Q Y +R T P+ + LL EI L A
Sbjct: 422 NQKAYNGIERVNFTAMKIFPLK-PTDITSLLTEIQLLIA 459
>ref|XP_740979.1| hypothetical protein PC000124.04.0 [Plasmodium chabaudi chabaudi]
emb|CAH80613.1| hypothetical protein PC000124.04.0 [Plasmodium chabaudi]
Length = 360
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/116 (31%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAE-GETFLPPVQYNLVKIDQLGP 1415
G+ ++SKG+++ ANK+F T+K+D E++L+EN+I+E E + +P YN I ++
Sbjct: 230 GKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYPISEIKA 289
Query: 1414 YVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLA 1247
+ LVD++G+V S + K + K+D+++ D++ +T+ ++LW + A
Sbjct: 290 NINTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGESA 345
>gb|ABA94881.1| hypothetical protein LOC_Os11g40920 [Oryza sativa (japonica
cultivar-group)]
Length = 2175
Score = 73.9 bits (180), Expect = 2e-11
Identities = 76/323 (23%), Positives = 132/323 (40%), Gaps = 13/323 (4%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVK-------IDQLGPYV 1409
++R AN+ ++ V N + ++ EE E P + ++L +D+ YV
Sbjct: 1658 TVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYV 1717
Query: 1408 GGRELV-DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQ 1232
G + D++GV+ V VR K N KR I + D S T+ ++LW + A
Sbjct: 1718 GLYGMQPDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERADAFDA 1777
Query: 1231 ELLDMV--DSSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGK 1064
+ + V+ V D+ G+ L+ G S + +N D+PE LK E
Sbjct: 1778 NSVYNAGQTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYLNLDIPEVLELK-----ESF 1832
Query: 1063 DTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQN 884
+ PIS V G + ++ + +P + + F + + I + +
Sbjct: 1833 SANFRPIS-WVDNPATGYNQDTAEEKTIQEILALNP--HKNRSTRFIVNVTVRRICSENS 1889
Query: 883 MWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAE 704
WY +C C + ++ +GS Y C C N RY +V+ D + A +F A
Sbjct: 1890 WWYNSCRLC-YRTSKPYGSSYKCSSC-SNIGIPDPRYKVVLIAGDASSNATFILFGRVAH 1947
Query: 703 KIIGCSADELDRIRKEEGDDSYV 635
++I S + L I D Y+
Sbjct: 1948 RLIKKSVESL--IEDNPPDSDYI 1968
>emb|CAG08929.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 73.9 bits (180), Expect = 2e-11
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Frame = -1
Query: 979 LSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT--CNKKVTEAFGSGYWCEGC 806
L+ + S+ EK +++ A I ++ + N Y+AC + CNKKV + + CE C
Sbjct: 24 LADVKSEHLGHGEKADYYTCIATIVFLRKE-NCLYQACPSQDCNKKVVDQQNGMFRCEKC 82
Query: 805 QKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKL 626
K R I+ ++D WV+ F E AE I+G +A L ++ KE + ++
Sbjct: 83 DKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQL-KESNEAAFNEVF 141
Query: 625 KEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
++A + +FR V Y +E R + TV PVD SK L+ I KL
Sbjct: 142 QQANFNSFIFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKRLIMNIRKL 192
>ref|NP_178764.1| unknown protein [Arabidopsis thaliana]
gb|AAD32756.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 458
Score = 73.2 bits (178), Expect = 3e-11
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 14/320 (4%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQL 1421
G + L A QFK + Y++ V + FL +N D L
Sbjct: 38 GEWRAIENFGLTYATGQFKATDHRYKMGFMAQTRVVRIDPLSDSYFLSLTAFN----DVL 93
Query: 1420 GPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT 1241
+ L+D+VG + +V ++ + N+ K D + D + + +LW A
Sbjct: 94 NGGLNQNYLIDVVGQIVNVGEMETI--DVHNQPTKKIDFELRDQKDERLPCTLWGSFAEQ 151
Query: 1240 TGQELLDMVDSSPVVAIKSLKVSDFQGV-SLST-IGRSTLEINPDLPEAKNLKSWYDSEG 1067
+ ++ K+ ++ V S+S S + INPDLPE K D+
Sbjct: 152 VFTACEAANGEMIICLVRFAKLKTYKDVRSISNAFNTSQILINPDLPEILEFK---DALP 208
Query: 1066 KDTSLAPI-----SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISH 902
KD + +++ G F ++ + + ++ +G+ K + I
Sbjct: 209 KDCLALTLIESKPKSKIDEFPTGDFYLQFAKKT-IKEVSEMFDVGRVK-----VLCTIYD 262
Query: 901 IKPDQNMWYRACTTCNKKVTE----AFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEA 734
I D + +Y C CNKKVT+ + + WCE C+ + RY + +K+ D +GE
Sbjct: 263 IDRDWSWYYIVCKKCNKKVTKVVMTSLKAQLWCETCRAPITNVLARYKLHVKVMDSSGEM 322
Query: 733 WVSVFNEHAEKIIGCSADEL 674
+ +F+ + +I+GC A+ L
Sbjct: 323 KLMLFDAMSSEIVGCPANNL 342
>ref|NP_174826.1| unknown protein [Arabidopsis thaliana]
gb|AAG51090.1| hypothetical protein [Arabidopsis thaliana]
Length = 567
Score = 73.2 bits (178), Expect = 3e-11
Identities = 80/354 (22%), Positives = 147/354 (41%), Gaps = 19/354 (5%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELV 1391
L A+ QF+ + Y+++ V FL ++ ++ +L P++ LV
Sbjct: 80 LTYASGQFRPTNHLYKMAFQVRTEVMGCASVSDSNFLTLASFSKIQSGELNPHM----LV 135
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D +G + +V + K +N+ K D + D + + ++LW A + + +
Sbjct: 136 DAIGQIITVGELEEL--KANNKRTTKIDFEIRDQMDERMQVTLWGTYAQEVYRACQES-E 192
Query: 1210 SSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
++KSL ++ S + +NPD PE + ++G ++ A V
Sbjct: 193 GKNTASVKSLS---------NSFDASQVHVNPDFPEVHDFSQTLLNDG---AICVFRARV 240
Query: 1030 GATRAGGFKSM-YSD--RVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
K YS+ R + ++ S +G+ + V ++YA+ + D +Y +C T
Sbjct: 241 PRFEMVAVKRTDYSEYTRNTIENLLSSTEVGKVR-VLCTIYAVDT----DWAWYYISCKT 295
Query: 859 CNKKVTEAFGS-----------GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNE 713
CNKKV +WC+ C + RY++ K+ D TGEA + +F+
Sbjct: 296 CNKKVNHIHAGVNGVNNKGKKPRFWCDTCTSVVTNVVSRYMIYAKVMDSTGEAKLLLFDS 355
Query: 712 HAEKIIGCSADELDRIRKEEGDDSYVL--KLKEATWVPHLFRVSVTQHEYMNEK 557
+IIG SA + +E DD L +K LF V V + ++ K
Sbjct: 356 ICSEIIGESAASVFNGSVDEIDDPEDLPDSVKNLIGKTFLFLVCVEKDNILDGK 409
>gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza sativa (japonica
cultivar-group)]
Length = 786
Score = 72.0 bits (175), Expect = 7e-11
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VD++GV+ V VR K N KR I + D S T+ ++LW D A + +
Sbjct: 341 VDVMGVITEVGAPAIVRPKSRNTDSLKRTIQICDASNSTLPVTLWGDKAAIFDADTIYNA 400
Query: 1213 DSS--PVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTSLAP 1046
+ V+ + V D+ G+ L G S + +N D+PE LK + + +
Sbjct: 401 GQTQPQVIVFVGMLVKDYPGLGLIVTGSSPCQWYLNLDIPEVLELKESFSANFR------ 454
Query: 1045 ISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
A V G + + ++ L + +P + + F + + I + + WY +C
Sbjct: 455 AIAWVDNPATGYNQDIAEEKKILEILALNP--HKNRSTRFIVTVTVKKICTENSWWYNSC 512
Query: 865 TTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
C + + +GS Y C GC N RY +V+ D + +A +F A ++I
Sbjct: 513 RMC-YRTSRPYGSTYKCSGC-SNIGIPDPRYKVVLIAGDDSCDATFILFGRIAHRLI 567
>ref|XP_476960.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC83855.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 544
Score = 71.6 bits (174), Expect = 9e-11
Identities = 79/317 (24%), Positives = 131/317 (41%), Gaps = 12/317 (3%)
Frame = -1
Query: 1588 RGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF--LPPVQYNLVK---IDQ 1424
R RVS+ + K+ V + Y + IVEE E LP +N V +D+
Sbjct: 77 RNFRVSRQT-----KKLNAVPSTYAIFFTPWTIVEEIPTEISGSLPLYIFNFVDFEDLDE 131
Query: 1423 LGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLAT 1244
+ G LVD++G + V P V+ N +R++ + D S + + I+LW + AT
Sbjct: 132 RARHPNG--LVDVIGQLTVVHPL--VQSNGLNGPSVRRNVELRDLSDRLLEITLWAEHAT 187
Query: 1243 TTGQELLDMV---DSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYD 1076
+ E L D ++ L + F G S + + IN D+PE ++
Sbjct: 188 SFEDEFLIETIGKDEPVIIVFAGLNMKLFSGAPSCRSSAATKWYINIDIPEINAFRTSLQ 247
Query: 1075 SEGKDTSLAPISAEV--GATRAGGFKSMYSDRVFLS-HITSDPAMGQEKPVFFSLYAIIS 905
G + L P A A + S+ + L+ H +D V F+ A I
Sbjct: 248 GRGCEVLLVPSDGAALGAANEADANRKSISELLSLNPHDNND--------VRFTCDARIK 299
Query: 904 HIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVS 725
I WY+AC+ C K V G+ C C + + Y + + + D T A +
Sbjct: 300 EIDVSSGWWYKACSICRKGVKPTL-QGFECVNCDNTEPIITPSYKLNVVIEDNTDRAKIF 358
Query: 724 VFNEHAEKIIGCSADEL 674
+F AE+++ +A +L
Sbjct: 359 MFGGMAEQVVRRTAADL 375
>ref|NP_175703.1| unknown protein [Arabidopsis thaliana]
gb|AAG52278.1| putative replication protein; 94555-97079 [Arabidopsis thaliana]
Length = 566
Score = 69.7 bits (169), Expect = 3e-10
Identities = 72/329 (21%), Positives = 140/329 (42%), Gaps = 13/329 (3%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEA---EGETFLPPVQYNLVKIDQL 1421
G T + + S+ A+ +++ + Y +++ + + E +L V +N D L
Sbjct: 72 GHWTIIEEFSVTKASGLYRSTTHPYRINIQSSTRFSNSPTISDEIWLDLVNFN----DVL 127
Query: 1420 GPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT 1241
+ +LV+++G + +V + + + K D + D + SLW A
Sbjct: 128 SGTLDQNKLVNVIGQLVNVGEIQLL--DVQGKPTKKIDFQLRDTDDNRLPCSLWGKFADQ 185
Query: 1240 TGQELLDMVDSSPVVAIKSLKVSDFQGV-SLST-IGRSTLEINPDLPEAKNLKSWYDSEG 1067
+ + V + I+ K+ ++ + S+S S + INP L E + K+ S+G
Sbjct: 186 IHKVSKESVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEEFKNLLPSDG 245
Query: 1066 KDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQ 887
++ R +S +R ++ + + + + K + I I D
Sbjct: 246 LALTIMEPKPRFQPLRVREERSKQFERKTIAELKASFEVEKVK-----IICSILSIDLDY 300
Query: 886 NMWYRACTTCNKKVTEA---FGSG-----YWCEGCQKNDSECSLRYIMVIKLSDPTGEAW 731
+ +Y A CNKKV ++ SG Y C+ C + + RY + + + D TGE+
Sbjct: 301 SWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIMDNTGESK 360
Query: 730 VSVFNEHAEKIIGCSADELDRIRKEEGDD 644
+ +F+ E IIGC A EL + E+ D+
Sbjct: 361 LMLFDSFVEPIIGCPATELLDVTNEQIDE 389
>ref|NP_568511.1| unknown protein [Arabidopsis thaliana]
Length = 485
Score = 69.3 bits (168), Expect = 4e-10
Identities = 84/328 (25%), Positives = 134/328 (40%), Gaps = 29/328 (8%)
Frame = -1
Query: 1570 KGSLRIANKQFK-------------TVKNDYELSLN--ENAIVEEAEGETFLPPVQYNLV 1436
+G R+ N QFK TV ND LSL E+ IV GE L
Sbjct: 44 RGQFRVTNHQFKMAFVNSTFVSPCPTVTNDAYLSLPTFESIIV----GELNL------FY 93
Query: 1435 KIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWN 1256
+D LG V ++ DIV ++NE+ K + + ++ + +LW
Sbjct: 94 LVDVLGQVVNVGKVEDIV---------------VNNESTKKLEFELRNEMNDRLPCTLWG 138
Query: 1255 DLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLST--IGRSTLEINPDLPEAKNLKSW 1082
A QE + V I+ K++ F+G + T S + INP+ PE ++ K+
Sbjct: 139 KFADQVIQECENSTGEIVVCLIRFAKINTFRGENQITNAFDASVVTINPEFPEVEHFKNS 198
Query: 1081 YDSEGKDTSLAPISAEVGATRAGGFKSM-YSDRVFLSHITSDPAMGQEKPVFFSLYAIIS 905
+G LA +E R F S Y D+ + I+ + + + I
Sbjct: 199 LPKDG----LALTISETNPRRELSFGSDGYFDQYPIKSISCLLHFLEVQKC--KVMCKIH 252
Query: 904 HIKPDQNMWYRACTTCNKKVT-----------EAFGSGYWCEGCQKNDSECSLRYIMVIK 758
I+ D +Y AC C+KKV + + YWC C N ++ R+ + +
Sbjct: 253 TIEGDFGWFYVACKKCSKKVEMNNKDKTAIADKPTKTTYWCPKCNLNITQVVPRFKLHVG 312
Query: 757 LSDPTGEAWVSVFNEHAEKIIGCSADEL 674
+ D TG+ +F+ A K+IG SA +L
Sbjct: 313 VIDQTGDIKCIMFDSAASKMIGHSAFDL 340
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
gb|ABA92343.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 68.6 bits (166), Expect = 7e-10
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 4/256 (1%)
Frame = -1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV- 1214
D++GV+ V VR K N KR I + D S T+ ++LW + A +
Sbjct: 1707 DVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERADAFDANSVYNAG 1766
Query: 1213 -DSSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTSLAPI 1043
+ V+ V D+ G+ L+ G S + +N D+PE LK E + P+
Sbjct: 1767 QTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYLNLDIPEVLELK-----ESFSANFRPV 1821
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
S V G + ++ + +P + + F + + I + + WY +C
Sbjct: 1822 S-WVDNPATGYNQDTAEEKTIQEILALNP--HKNRSTRFIVNVTVRRICSENSWWYNSCR 1878
Query: 862 TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
C + ++ +GS Y C C N RY +V+ D + A +F A ++I S
Sbjct: 1879 LC-YRTSKPYGSSYKCSSC-SNIGIPDPRYKVVLIAGDASSNATFILFGRVAHRLIKKSV 1936
Query: 682 DELDRIRKEEGDDSYV 635
+ L I D Y+
Sbjct: 1937 ESL--IEDNPPDSDYI 1950
>dbj|BAD81690.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 474
Score = 68.6 bits (166), Expect = 7e-10
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 9/335 (2%)
Frame = -1
Query: 1540 FKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGRE-LVDIVGVVQS 1367
+K N Y + L VE+ E P +NLV+ L VG +E D++G++
Sbjct: 127 YKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSYLSLRVGMQEYFTDVIGMIIG 186
Query: 1366 VSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVA-- 1193
VS VR PKR I + D + V + LW + A + + V V
Sbjct: 187 VSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHAPDFDADAVHSVGQDNAVVGI 246
Query: 1192 -IKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT---SLAPISAEVGA 1025
+ +L + +LS +N D+PE + ++DS G AE
Sbjct: 247 FVDTLMKAYNNEETLSGGSACKWYLNEDIPE---INQFFDSLGDSAPKIQWISTGAESFG 303
Query: 1024 TRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKV 845
+ + + L I A G FS I+ + P Q+ W+ +C+ C++
Sbjct: 304 SSQRPARLEHKSVADLKKIDPWEAAGAG----FSCTVTIAKLSPSQSWWFSSCSRCHRAA 359
Query: 844 TEAFGSGYWC-EGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDR 668
T A+GS Y C GC + +Y + + +D T A +F A++++G ++
Sbjct: 360 T-AYGSSYKCSSGC--SSVTAIPKYRLCLIGTDGTNSAEFVLFGRVAQQVVG--RPVMNL 414
Query: 667 IRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMN 563
I+ + D+ ++ F VSVT+ M+
Sbjct: 415 IKFQGRSDNIPKEIAAVVSQKFTFAVSVTERSLMH 449
>dbj|BAB11360.1| replication protein A1-like protein [Arabidopsis thaliana]
Length = 543
Score = 67.4 bits (163), Expect = 2e-09
Identities = 87/373 (23%), Positives = 151/373 (40%), Gaps = 20/373 (5%)
Frame = -1
Query: 1543 QFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVV 1373
++K Y ++ N N V + FL + VK + V L+DI+G V
Sbjct: 88 KYKISSLTYRMAFNHNTDVIKCDPVSDSVFLDLADFEGVKTESYDENV----LIDILGQV 143
Query: 1372 QSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV-DSSPVV 1196
V + + N+ K + + D S + + +LW A L + D VV
Sbjct: 144 VRVGKVDEIMAQ--NKPNKKLEFQIRDASNERLPCTLWGVFAEKVFSALKSIKHDEKTVV 201
Query: 1195 AIKSLKVSDFQGVSLSTIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAPISAEVGATR 1019
I+ K+++F+G + S + INP +PE + S+G ++
Sbjct: 202 LIRYAKINNFKGNHAFDV--SEVIINPVHVPEVELFVKSLPSDGLALTI----------- 248
Query: 1018 AGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKK--- 848
+ Y +R + +GQ + + S++AI + D +Y C CN+K
Sbjct: 249 ----QDNYVNRDLIK-------VGQWR-ILGSIFAIDT----DWGWFYFGCPKCNRKTEL 292
Query: 847 VTEAFGSG----------YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
V E+ +G +WC+ CQ++ + RY + +++ D T E + VF +A K+
Sbjct: 293 VKESTSTGKMVKTPMKPKFWCDKCQESITNVEARYKLHVRVMDQTAEIKLMVFENNATKL 352
Query: 697 IGCSADELDRIRKEEGDDSYVLK--LKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 524
IG S++EL + EE D ++ + F VSV + K +
Sbjct: 353 IGKSSEELVDGQYEEIKDPTIISDVITNLCGKTFHFLVSVEKANIYGGKDIYKVTKVHFG 412
Query: 523 VDFAAESKYLLEE 485
D A E LLE+
Sbjct: 413 TDIAKEESGLLED 425
>dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis thaliana]
Length = 1073
Score = 67.0 bits (162), Expect = 2e-09
Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 51/344 (14%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELV 1391
L A+ QF+ + Y+++ V FL ++ ++ +L P++ LV
Sbjct: 30 LTYASSQFRPTNHLYKMAFQVRTEVMGCASVSDSNFLTLAPFSKIQSGELNPHM----LV 85
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D +G + +V + + +N+ K D + D + + ++LW A + +
Sbjct: 86 DAIGQIITVGELEEL--EANNKPTTKIDFEIRDQMDERMQVTLWGTYAQQVYRACQESEG 143
Query: 1210 SSPVVAIKSLKVSDFQGV----------------------------SLS-TIGRSTLEIN 1118
+ + I+ K+ ++G+ SLS + S + +N
Sbjct: 144 KNVIFLIRFAKIKSYKGIFSFFVPIPFLSILHDLWSLKCYETAGVKSLSNSFDASQVHVN 203
Query: 1117 PDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHIT--------S 962
PD PEA + ++G + V TR F+ + R+ S T S
Sbjct: 204 PDFPEAHHFSQTLPNDG--------AICVYRTRVPRFEMVAVKRIDYSVYTRNTIEDLLS 255
Query: 961 DPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGS-----------GYWC 815
+G+ + V ++YAI + D +Y +C TCNKKV +WC
Sbjct: 256 STEVGKVR-VLCTIYAIDT----DWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWC 310
Query: 814 EGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
+ C+ + RY++ K+ D T EA + +F+ +IIG SA
Sbjct: 311 DTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICFEIIGESA 354
>ref|NP_198346.1| unknown protein [Arabidopsis thaliana]
Length = 1033
Score = 67.0 bits (162), Expect = 2e-09
Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 51/344 (14%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELV 1391
L A+ QF+ + Y+++ V FL ++ ++ +L P++ LV
Sbjct: 30 LTYASSQFRPTNHLYKMAFQVRTEVMGCASVSDSNFLTLAPFSKIQSGELNPHM----LV 85
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D +G + +V + + +N+ K D + D + + ++LW A + +
Sbjct: 86 DAIGQIITVGELEEL--EANNKPTTKIDFEIRDQMDERMQVTLWGTYAQQVYRACQESEG 143
Query: 1210 SSPVVAIKSLKVSDFQGV----------------------------SLS-TIGRSTLEIN 1118
+ + I+ K+ ++G+ SLS + S + +N
Sbjct: 144 KNVIFLIRFAKIKSYKGIFSFFVPIPFLSILHDLWSLKCYETAGVKSLSNSFDASQVHVN 203
Query: 1117 PDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHIT--------S 962
PD PEA + ++G + V TR F+ + R+ S T S
Sbjct: 204 PDFPEAHHFSQTLPNDG--------AICVYRTRVPRFEMVAVKRIDYSVYTRNTIEDLLS 255
Query: 961 DPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGS-----------GYWC 815
+G+ + V ++YAI + D +Y +C TCNKKV +WC
Sbjct: 256 STEVGKVR-VLCTIYAIDT----DWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWC 310
Query: 814 EGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
+ C+ + RY++ K+ D T EA + +F+ +IIG SA
Sbjct: 311 DTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICFEIIGESA 354
>gb|ABA96519.1| hypothetical protein LOC_Os12g06230 [Oryza sativa (japonica
cultivar-group)]
Length = 2248
Score = 67.0 bits (162), Expect = 2e-09
Identities = 79/361 (21%), Positives = 145/361 (40%), Gaps = 22/361 (6%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVKIDQLGP 1415
G+ R++ +R ++ ++ V N ++ + +EE + P Y+ ++L
Sbjct: 1473 GKVYRLTFYRVRPCSRNYRPVNNRMSINFTKWTTLEEHLDVPADFPCYAYSPTPYNELRS 1532
Query: 1414 YVGGRE-LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTT 1238
+V ++ D++GV+ VS +++ +I + KR + + + + I+LW + AT+
Sbjct: 1533 HVDRKDSFTDVIGVITEVSSVTTIQTRIKDGDSLKRSVCIRNADNVIINIALWGERATSF 1592
Query: 1237 GQE-LLDMVDSSPVVAI-------KSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSW 1082
++ ++ + P VAI ++ + VSLS IN D PE + K
Sbjct: 1593 PEDAIISAGEKEPQVAIFVGTLVRGYVRNASLGNVSLSGNSACKWYINIDTPEVNSFKD- 1651
Query: 1081 YDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISH 902
+G + I V G + + L + K F + +I
Sbjct: 1652 -SIKGNYEPIQFIDIPVPNVIVGAEQKTVAQLKELHPF-------KFKKHEFQVTVVIKK 1703
Query: 901 IKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSEC------SLRYIMVIKLSDPTG 740
+ WY AC C KK + +G Y C D C S R+ + I D T
Sbjct: 1704 FCMQASWWYTACDIC-KKTAKPYGRAYRC-----GDPTCPPIVSASPRFKLNIIAGDETA 1757
Query: 739 EAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYV------LKLKEATWVPHLFRVSVTQ 578
E +F A+++IG S D L + + D Y+ L K+ W VS+T+
Sbjct: 1758 ETTFILFGRLAQRLIGRSVDTL--LHENPSDKDYIPSAITDLLEKQFVW-----NVSITE 1810
Query: 577 H 575
+
Sbjct: 1811 N 1811
>ref|NP_189742.1| unknown protein [Arabidopsis thaliana]
Length = 450
Score = 66.6 bits (161), Expect = 3e-09
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Frame = -1
Query: 1246 TTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEG 1067
T G+ ++ +V + + K D + +S + S + IN D+PE K +G
Sbjct: 131 TANGEMIICLVRFAKLKTYK-----DVRSIS-NAFNTSQILINTDIPEILEFKDALPKDG 184
Query: 1066 KDTSL--APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKP 893
+L + +EV G F ++ + +E F + I I
Sbjct: 185 LALTLIESKPKSEVAELPTGDFYLQFAKKTI-----------KEVSEMFDVLCTIYDIDR 233
Query: 892 DQNMWYRACTTCNKKVTEAFGSG----YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVS 725
D + +Y AC CNKKVT+ + +WCE C+ + RY + +K+ D +GE +
Sbjct: 234 DWSWYYIACKKCNKKVTKVVTTSLKAQFWCETCRAPVNNVLARYKLHVKVMDSSGEMKLM 293
Query: 724 VFNEHAEKIIGCSADEL 674
+F+ A +I+GC A+ L
Sbjct: 294 LFDAMASEIVGCPANNL 310
>gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza sativa (japonica
cultivar-group)]
Length = 764
Score = 66.2 bits (160), Expect = 4e-09
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKR-----DIVVADDSGKTVTISLWNDLATTTGQE 1229
+D++G++ + P +R + T +R +I + G+ V I+LW D+ +
Sbjct: 112 LDVIGLLSGMKPI--EQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDD 169
Query: 1228 LLDMVDSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
D++ V L V +++ + S + + ++ ++P + + S +++E +
Sbjct: 170 --DLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAE----KV 223
Query: 1051 APISAEVGATRAGGFKS-MYSDRVFLSHITSDPAMG-QEKPVFFSLYAIISHIKPDQNMW 878
P EV A+ G + M+ +R L IT Q+K ++ A I IK +N W
Sbjct: 224 LPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIK-SRNWW 282
Query: 877 YRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
Y +C C T + Y C C K RY++ +++SD T ++FNE AE+I
Sbjct: 283 YMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERI 341
Query: 697 IG 692
G
Sbjct: 342 FG 343
>gb|AAV44036.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 820
Score = 66.2 bits (160), Expect = 4e-09
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKR-----DIVVADDSGKTVTISLWNDLATTTGQE 1229
+D++G++ + P +R + T +R +I + G+ V I+LW D+ +
Sbjct: 112 LDVIGLLSGMKPI--EQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDD 169
Query: 1228 LLDMVDSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
D++ V L V +++ + S + + ++ ++P + + S +++E +
Sbjct: 170 --DLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAE----KV 223
Query: 1051 APISAEVGATRAGGFKS-MYSDRVFLSHITSDPAMG-QEKPVFFSLYAIISHIKPDQNMW 878
P EV A+ G + M+ +R L IT Q+K ++ A I IK +N W
Sbjct: 224 LPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIK-SRNWW 282
Query: 877 YRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
Y +C C T + Y C C K RY++ +++SD T ++FNE AE+I
Sbjct: 283 YMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERI 341
Query: 697 IG 692
G
Sbjct: 342 FG 343
>ref|XP_739325.1| replication factor a protein [Plasmodium chabaudi chabaudi]
emb|CAH77169.1| replication factor a protein, putative [Plasmodium chabaudi]
Length = 255
Score = 66.2 bits (160), Expect = 4e-09
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 23/255 (9%)
Frame = -1
Query: 1165 QGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT----SLAPISAEVGATRAGGFKSM 998
QG L + ++ +EI+P+L +A LK+W+ + K+ +LA ++ K++
Sbjct: 1 QGKKLESHPKTKVEIDPELDKAYTLKNWWANNKKNVYNTINLATSTSNNNMLNLESQKTI 60
Query: 997 YSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVT-------- 842
+ ++ + G K + F+ + I HI + Y AC CNKK+
Sbjct: 61 QEIKKNVNLANEEVLSG--KGIIFTTFGFIDHIYNSIPV-YSACPNCNKKMVATVIEDGE 117
Query: 841 ----EAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII-GCSADE 677
E +C C KN+ Y + +K++D T VS F A+ I+ G SA+E
Sbjct: 118 QDMDENVSESMYCSKCNKNNIPV-YNYSINLKITDNTDSLRVSAFANAAKTIMNGLSAEE 176
Query: 676 LDRIRKE----EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD--F 515
++R+E E +++ L +++A FR+ +M+E ++ T+ P+
Sbjct: 177 FMKLRQEHISQENIENFDL-IEKAKLNEFFFRIKAYMTSHMDEIKKNYTILETIPLSKLL 235
Query: 514 AAESKYLLEEIAKLT 470
+YL++EI T
Sbjct: 236 VDNCRYLIKEIKLAT 250
>gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa (japonica
cultivar-group)]
Length = 800
Score = 66.2 bits (160), Expect = 4e-09
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKR-----DIVVADDSGKTVTISLWNDLATTTGQE 1229
+D++G++ + P +R + T +R +I + G+ V I+LW D+ +
Sbjct: 112 LDVIGLLSGMKPI--EQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDD 169
Query: 1228 LLDMVDSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
D++ V L V +++ + S + + ++ ++P + + S +++E +
Sbjct: 170 --DLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAE----KV 223
Query: 1051 APISAEVGATRAGGFKS-MYSDRVFLSHITSDPAMG-QEKPVFFSLYAIISHIKPDQNMW 878
P EV A+ G + M+ +R L IT Q+K ++ A I IK +N W
Sbjct: 224 LPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIK-SRNWW 282
Query: 877 YRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
Y +C C T + Y C C K RY++ +++SD T ++FNE AE+I
Sbjct: 283 YMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERI 341
Query: 697 IG 692
G
Sbjct: 342 FG 343
>gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza sativa (japonica
cultivar-group)]
Length = 757
Score = 66.2 bits (160), Expect = 4e-09
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKR-----DIVVADDSGKTVTISLWNDLATTTGQE 1229
+D++G++ + P +R + T +R +I + G+ V I+LW D+ +
Sbjct: 112 LDVIGLLSGMKPI--EQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDD 169
Query: 1228 LLDMVDSSPVVAIKSLKVSDFQGV-SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
D++ V L V +++ + S + + ++ ++P + + S +++E +
Sbjct: 170 --DLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAE----KV 223
Query: 1051 APISAEVGATRAGGFKS-MYSDRVFLSHITSDPAMG-QEKPVFFSLYAIISHIKPDQNMW 878
P EV A+ G + M+ +R L IT Q+K ++ A I IK +N W
Sbjct: 224 LPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIK-SRNWW 282
Query: 877 YRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKI 698
Y +C C T + Y C C K RY++ +++SD T ++FNE AE+I
Sbjct: 283 YMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERI 341
Query: 697 IG 692
G
Sbjct: 342 FG 343
>dbj|BAB02796.1| replication protein A1-like [Arabidopsis thaliana]
Length = 581
Score = 65.5 bits (158), Expect = 6e-09
Identities = 74/356 (20%), Positives = 145/356 (40%), Gaps = 20/356 (5%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELS-LNENAIVEE--AEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SL A F+ + Y++S +N +++ +L + ++ +L P + L
Sbjct: 79 SLNYAGGSFRPTSHLYKMSFVNGTSVIPSPSVSDSNYLTLATFEKIQSGELNPTM----L 134
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VD++G + + + + +N+ K D + D S + + ++LW A + +
Sbjct: 135 VDVIGQIVMIGELEEL--EANNKPTTKIDFDIRDASDERIGVTLWGTFAQQVYRGCNEAG 192
Query: 1213 DSSPVVAIKSLKVSDFQGVS--LSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI- 1043
V ++ +K+ ++GV ++ S + +NP PE +G +
Sbjct: 193 ARPVVCVLRFVKIKSYKGVRNLSNSFDASQVFVNPQFPEVDAFLRTLPQDGILLTYRERI 252
Query: 1042 -SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC 866
E+ ++ Y R + + + +G+ + L I I D +Y +C
Sbjct: 253 PKLEIVVSKKSDSCLEYP-RNTIQQLLNAVDVGKAR-----LMCTIYAIDTDWAWYYISC 306
Query: 865 TTCNKKVTEAFGS-----------GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
CNKKVT +WC+ C+ + RY++ K+ D TGE+ + +F
Sbjct: 307 RACNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTNVIARYMIYAKVMDNTGESKLLLF 366
Query: 718 NEHAEKIIGCSADELDRIRKEEGDDSYVL--KLKEATWVPHLFRVSVTQHEYMNEK 557
++ +IIG +A + +E DD L LK LF VS+ + + K
Sbjct: 367 DQICTEIIGETAPSVLNGSVDEIDDPDDLPDALKNLYGKTFLFLVSIEKENIWDGK 422
>dbj|BAD87333.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD87158.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 1083
Score = 64.3 bits (155), Expect = 1e-08
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 6/295 (2%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETF-LPPVQYNLVKIDQLGPYVGGRE-LVD 1388
++ +NK ++ V N ++ + VE+ F P V Y+L ++++ +V E VD
Sbjct: 594 VKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVD 653
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++GV+ +S +R K + + KR + + + T+ +SLW + A E +
Sbjct: 654 VIGVITEISTPTMLRPKSRDASSLKRTVQICYANNSTLNVSLWAEQALAFDAESIHKAGQ 713
Query: 1207 S--PVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTSLAPIS 1040
S +V ++ G+ L+ S + IN ++P+ +LK+ + + L
Sbjct: 714 SEPQIVLFVGTLAKNYPGIGLALSRGSVCKWYININVPKMVDLKNRIGANFQPIKL---- 769
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
+ A D+ + +P + + F I I D + WY +C
Sbjct: 770 --LQAPTTNIADENADDKTVRERLDMNP--HKNRRTRFQANVTIRKICNDSSWWYNSCEK 825
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKII 695
C +V + FG Y + RY + + D T +A +F + A++I+
Sbjct: 826 C-LRVVKPFGYTY--------NEIIMYRYKLSVLAGDDTADAVFILFGKIAQRIV 871
>ref|NP_198524.1| unknown protein [Arabidopsis thaliana]
Length = 566
Score = 63.2 bits (152), Expect = 3e-08
Identities = 89/379 (23%), Positives = 149/379 (39%), Gaps = 26/379 (6%)
Frame = -1
Query: 1543 QFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVV 1373
++K Y ++ N N V + FL + VK + V L+DI+G V
Sbjct: 116 KYKISSLTYRMAFNHNTDVIKCDPVSDSVFLDLADFEGVKTESYDENV----LIDILGQV 171
Query: 1372 QSVSPTLSV------RRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV- 1214
V + +K+DNE +P +LW A L +
Sbjct: 172 VRVGKVDEIMAQNKPNKKLDNERLP---------------CTLWGVFAEKVFSALKSIKH 216
Query: 1213 DSSPVVAIKSLKVSDFQG-VSL-STIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAPI 1043
D VV I+ K+++F+G +S+ S S + INP +PE + S+G ++
Sbjct: 217 DEKTVVLIRYAKINNFKGEISITSAFDVSEVIINPVHVPEVELFVKSLPSDGLALTI--- 273
Query: 1042 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACT 863
+ Y +R + +GQ + + S++AI + D +Y C
Sbjct: 274 ------------QDNYVNRDLIK-------VGQWR-ILGSIFAIDT----DWGWFYFGCP 309
Query: 862 TCNKK---VTEAFGSG----------YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSV 722
CN+K V E+ +G +WC+ CQ++ + RY + +++ D T E + V
Sbjct: 310 KCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVEARYKLHVRVMDQTAEIKLMV 369
Query: 721 FNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRIT 542
F +A K+IG S++EL + EE + F VSV + K
Sbjct: 370 FENNATKLIGKSSEELVDGQYEEDPTIISDVITNLCGKTFHFLVSVEKANIYGGKDIYKV 429
Query: 541 VRGEAPVDFAAESKYLLEE 485
+ D A E LLE+
Sbjct: 430 TKVHFGTDIAKEESGLLED 448
>ref|NP_179052.2| unknown protein [Arabidopsis thaliana]
Length = 544
Score = 60.5 bits (145), Expect = 2e-07
Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 16/306 (5%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIV---EEAEGETFLPPVQYNLVKIDQLGPYVGGRELV 1391
L A+ QF+ + Y+++ + V FL ++ ++ +L P++ LV
Sbjct: 74 LTYASGQFRPTNHLYKMAFHVRTKVMGCASVSDSNFLTLAPFSKIQSGELNPHM----LV 129
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D +G + +V + + +N+ K D + D + + ++LW A + +
Sbjct: 130 DAIGQIITVGELEEL--EANNKPTTKIDFEIRDQMDERMQVTLWGTYAQQVYRACQESEG 187
Query: 1210 SSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+ + I+ K+ + +S ++ S + +NPD PEA + + P V
Sbjct: 188 KNVIFLIRFAKIKSVKSLS-NSFDASQVHVNPDFPEAHHF----------SQTVPRFEMV 236
Query: 1030 GATRAGGFKSMYSD--RVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTC 857
R YS+ R + + S +G+ + V ++YAI + D +Y C TC
Sbjct: 237 AVKRID-----YSEYTRNTIEDLLSSTEVGKVR-VLCTIYAIDT----DWAWYYINCKTC 286
Query: 856 NKKVTEAFGS-----------GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
NKKV +WCE C+ ++M D TGEA + +F+
Sbjct: 287 NKKVNHIHAGVNGVNNKGKKPRFWCETCKS--------FVM-----DSTGEAKLLLFDSI 333
Query: 709 AEKIIG 692
+IIG
Sbjct: 334 CSEIIG 339
>ref|XP_470551.1| Putative helicase [Oryza sativa (japonica cultivar-group)]
gb|AAN65446.1| Putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 764
Score = 59.3 bits (142), Expect = 4e-07
Identities = 69/314 (21%), Positives = 143/314 (45%), Gaps = 11/314 (3%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETF-LPPVQYNLVKIDQLGPYVGGR 1400
+SK ++ A ++ V N Y + LN+ + EA+ + P ++LV D+L +
Sbjct: 317 ISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTFDLVSFDKLHDFTSKT 376
Query: 1399 E-LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT-TGQEL 1226
+ +D++G + +VS + + + +R + + D SGKT+ +SL A G+ +
Sbjct: 377 DRFLDVIGKIIAVSNAAMISTSSSDYRM-RRIVKLQDLSGKTIDLSLSGKRAVEFDGETI 435
Query: 1225 LDMVDSSPVVAI---KSLKV--SDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKD 1061
L++ ++ ++AI S+K+ ++ +S +T R + N D+PE K +
Sbjct: 436 LEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYINEN-DIPEIKMFQKCLPPHADP 494
Query: 1060 TSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM 881
+ ++ R+ K++ L I DP + +++ + A I I+ +
Sbjct: 495 IQKLYLQSDEDMQRSIEHKTLAE----LKEI--DPFVDKDEK--YQCTATIIGIQERKTW 546
Query: 880 WYRACTTCNKKVTEAFGSGYWCEGCQKNDSEC---SLRYIMVIKLSDPTGEAWVSVFNEH 710
Y+AC CN K+ G + C+K + C +Y + +D T + +F +
Sbjct: 547 CYQACKLCNCKM---IWDGSILK-CKKENCPCRQYEYKYKIPFIANDGTASLELVLFEKK 602
Query: 709 AEKIIGCSADELDR 668
++IG +A+ + R
Sbjct: 603 GTELIGRTAETMKR 616
>ref|NP_187935.1| unknown protein [Arabidopsis thaliana]
Length = 570
Score = 58.2 bits (139), Expect = 1e-06
Identities = 74/354 (20%), Positives = 140/354 (39%), Gaps = 18/354 (5%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELS-LNENAIVEE--AEGETFLPPVQYNLVKIDQLGPYVGGREL 1394
SL A F+ + Y++S +N +++ +L + ++ +L P + L
Sbjct: 79 SLNYAGGSFRPTSHLYKMSFVNGTSVIPSPSVSDSNYLTLATFEKIQSGELNPTM----L 134
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV 1214
VD++G + + + + +N+ K D + D S + + ++LW A + +
Sbjct: 135 VDVIGQIVMIGELEEL--EANNKPTTKIDFDIRDASDERIGVTLWGTFAQQVYRGCNE-A 191
Query: 1213 DSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI--S 1040
+ PVV + + F S + +NP PE +G +
Sbjct: 192 GARPVVCVLRNLSNSFDA--------SQVFVNPQFPEVDAFLRTLPQDGILLTYRERIPK 243
Query: 1039 AEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTT 860
E+ ++ Y R + + + +G+ + L I I D +Y +C
Sbjct: 244 LEIVVSKKSDSCLEYP-RNTIQQLLNAVDVGKAR-----LMCTIYAIDTDWAWYYISCRA 297
Query: 859 CNKKVTEAFGS-----------GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNE 713
CNKKVT +WC+ C+ + RY++ K+ D TGE+ + +F++
Sbjct: 298 CNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTNVIARYMIYAKVMDNTGESKLLLFDQ 357
Query: 712 HAEKIIGCSADELDRIRKEEGDDSYVL--KLKEATWVPHLFRVSVTQHEYMNEK 557
+IIG +A + +E DD L LK LF VS+ + + K
Sbjct: 358 ICTEIIGETAPSVLNGSVDEIDDPDDLPDALKNLYGKTFLFLVSIEKENIWDGK 411
>gb|AAM15454.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 521
Score = 56.6 bits (135), Expect = 3e-06
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Frame = -1
Query: 1543 QFKTVKNDYELSLNENAIVEEAEG---ETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVV 1373
++K Y + N V + + FL + +K + V L+DI+G V
Sbjct: 36 KYKISSLSYPMGFKHNTEVSKCDSVSDSVFLDLADFEGIKTESYDENV----LIDILGQV 91
Query: 1372 QSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV-DSSPVV 1196
SV + + N+ K + + D S + ++ +LW A L + D VV
Sbjct: 92 VSVGKVDEIVAQ--NKPNKKLEFQIRDVSNELLSCTLWGVFAEKVFSALKSVKHDQKTVV 149
Query: 1195 AIKSLKVSDFQG-VSL-STIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP--ISAEV 1031
I+ K+++F+ +S+ S S + I+P +PE S+G ++ ++ ++
Sbjct: 150 LIRYAKINNFKSEISITSAFDVSDVIIHPVHVPEVDLFVKSLPSDGLALTIQDSYVNRDI 209
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNK 851
T++ F + + + + +GQ + + S++AI + D +Y C CN+
Sbjct: 210 IKTKSVDFFDYPAKTIV--DLLNGRDVGQWR-ILGSIFAIDT----DWGWFYFGCPKCNR 262
Query: 850 KVTEAFGSG-------------YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
K+ S +WC+ Q++ + RY + I++ D TGE + VF +
Sbjct: 263 KIELVKESTSTVKRIQAPTKPKFWCDKYQESITNVEARYKLHIRVMDQTGEIKLMVFENN 322
Query: 709 AEKIIGCSADELDRIRKEEGDD 644
A +I S++EL + EE +D
Sbjct: 323 ATNLIRKSSEELLDGQYEEIED 344
>ref|NP_178584.2| unknown protein [Arabidopsis thaliana]
Length = 572
Score = 56.6 bits (135), Expect = 3e-06
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Frame = -1
Query: 1543 QFKTVKNDYELSLNENAIVEEAEG---ETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVV 1373
++K Y + N V + + FL + +K + V L+DI+G V
Sbjct: 87 KYKISSLSYPMGFKHNTEVSKCDSVSDSVFLDLADFEGIKTESYDENV----LIDILGQV 142
Query: 1372 QSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV-DSSPVV 1196
SV + + N+ K + + D S + ++ +LW A L + D VV
Sbjct: 143 VSVGKVDEIVAQ--NKPNKKLEFQIRDVSNELLSCTLWGVFAEKVFSALKSVKHDQKTVV 200
Query: 1195 AIKSLKVSDFQG-VSL-STIGRSTLEINP-DLPEAKNLKSWYDSEGKDTSLAP--ISAEV 1031
I+ K+++F+ +S+ S S + I+P +PE S+G ++ ++ ++
Sbjct: 201 LIRYAKINNFKSEISITSAFDVSDVIIHPVHVPEVDLFVKSLPSDGLALTIQDSYVNRDI 260
Query: 1030 GATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNK 851
T++ F + + + + +GQ + + S++AI + D +Y C CN+
Sbjct: 261 IKTKSVDFFDYPAKTIV--DLLNGRDVGQWR-ILGSIFAIDT----DWGWFYFGCPKCNR 313
Query: 850 KVTEAFGSG-------------YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEH 710
K+ S +WC+ Q++ + RY + I++ D TGE + VF +
Sbjct: 314 KIELVKESTSTVKRIQAPTKPKFWCDKYQESITNVEARYKLHIRVMDQTGEIKLMVFENN 373
Query: 709 AEKIIGCSADELDRIRKEEGDD 644
A +I S++EL + EE +D
Sbjct: 374 ATNLIRKSSEELLDGQYEEIED 395
>emb|CAB49209.1| RPA41 subunit of the hetero-oligomeric complex involved in homologous
recombination [Pyrococcus abyssi GE5]
ref|NP_125978.1| hypothetical protein PAB2163 [Pyrococcus abyssi GE5]
Length = 375
Score = 54.7 bits (130), Expect = 1e-05
Identities = 81/360 (22%), Positives = 143/360 (39%), Gaps = 19/360 (5%)
Frame = -1
Query: 1495 AIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIP 1316
A++ E G + + +L++I +L P + RE V++VG V P RK D
Sbjct: 62 ALLAERLGIDLIEKEEVSLMRISELYPGMDPRE-VNVVGRVLKKYPPREYTRK-DGSVGR 119
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSD-FQGVSLSTIG 1139
+++ DDSG+ + LW+ + E + ++ V+ + +V + G+ I
Sbjct: 120 VASLIIYDDSGRARVV-LWDAKVS----EYYNKIEVGDVIKVLDAQVKESLSGLPELHIN 174
Query: 1138 -RSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITS 962
R+ + +NPD P + + P+ AT R + I +
Sbjct: 175 FRARIILNPDDPRVE-------------MIPPLEEVRVATYT---------RKKIKDIEA 212
Query: 961 DPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECS 782
+ + +Y +++ Y AC C KKV G G W C ++
Sbjct: 213 GDRFVEVRGTIAKVYRVLT---------YDACPECKKKVDYDEGLGVWI--CPEHGEVQP 261
Query: 781 LRY-IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVP 605
++ I+ L D TG V++F + AE+++G S +E+ KE + L KEA
Sbjct: 262 IKMTILDFGLDDGTGYIRVTLFGDDAEELLGVSPEEIAEKIKELEESG--LTTKEAA--- 316
Query: 604 HLFRVSVTQHEYMNEKRQRITVRGEA----------------PVDFAAESKYLLEEIAKL 473
+ + E+ N + I VRG VD+ E + + EE+ KL
Sbjct: 317 ----RKLAEDEFYNIIGREIVVRGNVIEDRFLGLILRASSWEDVDYRREIERIKEELEKL 372
>gb|ABA98117.1| hypothetical protein LOC_Os12g26850 [Oryza sativa (japonica
cultivar-group)]
Length = 1201
Score = 54.7 bits (130), Expect = 1e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGP 1415
G+ + ++R AN+ ++ V + + + +EE + P + ++L +
Sbjct: 756 GKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPS 815
Query: 1414 YVGGREL-VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT- 1241
V VDI+GV+ + T +VR + N KR + + D S T+ ++LW + AT
Sbjct: 816 LVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGERATAF 875
Query: 1240 TGQELLDMVDSSP-VVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWY 1079
+ + + P VV V +++G+ L+ G S + IN ++PE LK Y
Sbjct: 876 DAENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVVELKERY 932
>ref|NP_567321.1| unknown protein [Arabidopsis thaliana]
emb|CAB81115.1| AT4g07450 [Arabidopsis thaliana]
gb|AAD48951.1| contains similarity to Oryza sativa replication protein A1
(GB:AF009179) [Arabidopsis thaliana]
Length = 439
Score = 54.3 bits (129), Expect = 1e-05
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 15/249 (6%)
Frame = -1
Query: 1333 DNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVS---DFQ 1163
+N+ K D + D + +LW A Q + D + V I+ K++ D +
Sbjct: 78 NNKPTKKIDFHLRDQHDTRLACTLWGKYAEIVDQACQESADGTVVCLIRFAKINLYNDTK 137
Query: 1162 GVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT-SLAPISAEVGATRAGGFKSMYSDR 986
VS ++ S + ++P L E K ++G S + A R G Y +
Sbjct: 138 SVS-NSFDVSQVFVDPTLAELGLFKQSIPTDGLTLGSSGSFHKRLYAPRTGDDDGDYPRQ 196
Query: 985 VFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFG-------- 830
+TS +G+ K V +S I D +Y C NKKV E
Sbjct: 197 TIKDVLTSSD-VGKCKTV-----CTVSAIDTDWPWYYFCCRAHNKKVVEEEAIKLEDVKL 250
Query: 829 ---SGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 659
+WCE C ++ + + + TGEA +F+ HA++I G A EL
Sbjct: 251 PQKPRFWCEICNGFAKYVVAKFWLHLHIMGQTGEARCMLFDSHAKEIFGTIAPELLDGSF 310
Query: 658 EEGDDSYVL 632
+E +D VL
Sbjct: 311 DEIEDPTVL 319
>ref|XP_472095.1| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar-group)]
emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 53.5 bits (127), Expect = 2e-05
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVKIDQLGPYVGGRE-LVD 1388
+R ++ +K V N ++ IVEE T P Y+L +QL + ++ D
Sbjct: 711 VRNCSRSYKPVSNSLAIAFTGWTIVEEYVNAPTSFPFYTYSLKSFNQLTALLDNKDSFTD 770
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLAT 1244
+GV+ VS SVR + + KR++ ++D + T+ +SLW D AT
Sbjct: 771 TIGVITEVSSITSVRSRTRDGDSLKRNVFISDANNATIRVSLWGDRAT 818
Score = 38.5 bits (88), Expect = 0.82
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = -1
Query: 898 KPDQNMWYRACTTCNKKVTEAFGSGYWCEG--CQKNDSECSLRYIMVIKLSDPTGEAWVS 725
K D + WY AC C ++ +G Y C G C S R+ + + D T +
Sbjct: 856 KIDGSWWYVACDRC-RRTARPYGKTYRCGGGDCPAT-VPASPRFKLGLIAGDDTADTKFV 913
Query: 724 VFNEHAEKIIGCSADELDRIRKEEGDDSYVLKL------KEATW 611
+F A++IIG S + L + + D++Y+ K K+ TW
Sbjct: 914 MFGRMAQRIIGKSVENL--LDQHPADEAYIPKQITDLLEKQFTW 955
>dbj|BAA31015.1| 361aa long hypothetical protein [Pyrococcus horikoshii OT3]
ref|NP_143719.1| hypothetical protein PH1893 [Pyrococcus horikoshii OT3]
Length = 361
Score = 51.6 bits (122), Expect = 9e-05
Identities = 78/351 (22%), Positives = 145/351 (41%), Gaps = 10/351 (2%)
Frame = -1
Query: 1495 AIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIP 1316
A++ E G + + +L+KI L P + RE V+I+G V P +K D
Sbjct: 48 ALLAERLGIDLIEREETSLMKISDLYPGMDPRE-VNIIGRVLKKYPVREYTKK-DGSIGR 105
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSD-FQGVSLSTIG 1139
+V+ DDSG+ + LW+ E + ++ V+ + +V + G+ I
Sbjct: 106 VASLVIYDDSGRARVV-LWDGKVA----EYYNKIEVGDVIKVLDAQVRESLSGLPELHIN 160
Query: 1138 -RSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITS 962
R+ + +NP+ P S+ P+ AT R + I
Sbjct: 161 FRARIILNPEDPRVD-------------SIPPLEEVRIATYT---------RKKIGDIEP 198
Query: 961 DPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYW-CEGCQKNDSEC 785
+ + +Y +++ Y AC C KKV G+G W C + + E
Sbjct: 199 GDRFIEIRGTIAKVYRVLT---------YDACPECKKKVDYDPGTGVWICP--EHGEVEP 247
Query: 784 SLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADEL-DRIRKEEGD----DSYVLKLKE 620
I+ L D TG V++F + AE+++G S++E+ ++I++ E KL E
Sbjct: 248 IKMTILDFGLDDGTGYIRVTLFGDDAEELLGVSSEEIAEKIKELENSGLTTKEAARKLAE 307
Query: 619 ATWVPHLFRVSVTQHEYMNEKRQRITVRGEA--PVDFAAESKYLLEEIAKL 473
+ + + V + + ++ + +R + VD+ E + + EE+ KL
Sbjct: 308 EEFYKIIGKEIVVRGNVIEDRFLGLILRASSWEEVDYRKEIENIKEELEKL 358
>ref|NP_189676.1| unknown protein [Arabidopsis thaliana]
Length = 509
Score = 50.4 bits (119), Expect = 2e-04
Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 15/270 (5%)
Frame = -1
Query: 1396 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 1217
L +I+G V + S ++ N+ K D + D + +LW A Q +
Sbjct: 130 LHNIIGQVVNRSEIQNLNAS--NKPTKKIDFHLRDQHDTRLACTLWGKYAEIVDQACQES 187
Query: 1216 VDSSPVVAIKSLKVS---DFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT-SLA 1049
D V I+ K++ D + VS ++ S + ++ L E K ++G S
Sbjct: 188 TDGIVVCLIRFAKINLYNDTRSVS-NSFDVSQVFVDHTLAELGLFKQSIPTDGLTLGSSG 246
Query: 1048 PISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRA 869
+ A R G Y R + + + +G+ K V +S I D +Y
Sbjct: 247 SFHKRLYAPRTGDDDGDYP-RQTIKEVLTFSDVGKCKTV-----CTVSAIDTDWPWYYFC 300
Query: 868 CTTCNKKVTEAFG-----------SGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSV 722
C NKKV + +WCE C ++ + + + D TGEA +
Sbjct: 301 CRAHNKKVVKEEAIKFEDVKLPQKPRFWCEICNGFAKSVVPKFWLHLHIMDQTGEAKCML 360
Query: 721 FNEHAEKIIGCSADELDRIRKEEGDDSYVL 632
F+ HA++I+G +A +L +E +D VL
Sbjct: 361 FDSHAKEILGITAHDLLAGSFDEIEDPTVL 390
>ref|NP_178646.1| unknown protein [Arabidopsis thaliana]
gb|AAC95166.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04
Identities = 58/249 (23%), Positives = 97/249 (38%), Gaps = 15/249 (6%)
Frame = -1
Query: 1333 DNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVS---DFQ 1163
+N+ K D + D + LW A + + D V I+ K++ D +
Sbjct: 129 NNKPTKKIDFHLRDQHDTRLACILWGKYAEIVDKACQESTDGIVVCLIRFAKINLYNDTR 188
Query: 1162 GVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDT-SLAPISAEVGATRAGGFKSMYSDR 986
VS + S + ++P L E K ++G S + A R G Y +
Sbjct: 189 SVS-NFFDVSQVFVDPTLAELDLFKQSIPTDGLTLGSSGSFHKRLYAPRTGDDDGDYPRQ 247
Query: 985 VFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFG-------- 830
+TS +G+ K V +S I D +Y C NKKV +
Sbjct: 248 TIKEVLTSSD-VGKCKTV-----CTVSAIDTDWPCYYFCCRAHNKKVVKEEAIKLEDVKQ 301
Query: 829 ---SGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 659
+WCE C ++ + + + D T EA +F+ HA++I+G +A +L
Sbjct: 302 PQKPRFWCEICNGFAKSVVAKFCLHLHIMDQTDEARCMLFDSHAKEILGTTAPQLLDGSF 361
Query: 658 EEGDDSYVL 632
+E +D VL
Sbjct: 362 DEIEDPTVL 370
>ref|XP_466062.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25421.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25604.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 197
Score = 49.3 bits (116), Expect = 5e-04
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Frame = -1
Query: 1291 DSGKTVTISLWNDLATTTGQELLDMVDSSP--VVAIKSLKVSDFQGVSLSTIGRSTLE-- 1124
+S T+ +SLW + A+ + + S ++ ++ G+ L+ G S +
Sbjct: 12 NSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWY 71
Query: 1123 INPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQ 944
IN D+P LK D G T+ PI+ RA + + ++ + +P +
Sbjct: 72 INIDVPAIVELK---DKTG--TNFQPINWIEAPARAA-VEEVAENKTVRELLEINPH--K 123
Query: 943 EKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMV 764
K V F + + I D+ WY +C C K V + +GS Y C C N + RY +V
Sbjct: 124 CKKVRFQAHVTVRRICNDKCWWYGSCQRCFK-VAKPYGSTYKCTSC-SNIAVAVPRYRIV 181
Query: 763 IKLSDPTGEAWVSVF 719
+ D + +A +F
Sbjct: 182 VIAGDDSDDAMFVLF 196
>ref|XP_470467.1| expressed protein, with alternative splicing isoforms [Oryza sativa
(japonica cultivar-group)]
gb|AAS01984.1| expressed protein, with alternative splicing isoforms [Oryza sativa
(japonica cultivar-group)]
Length = 545
Score = 48.5 bits (114), Expect = 8e-04
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 9/276 (3%)
Frame = -1
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELV-DIVGVVQSVSPTLSVRRKIDNETIP 1316
+ E+ + P ++ D+L ++++ D +G++ ++ P +V + +
Sbjct: 105 VTEDTGPPSTFPSYACKILSFDELRARAYKKDIISDAIGIMTAIGPVQTVSYAGVMKAVL 164
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQE-LLDMVDSSPVVAIKSLKVSDFQGVSLSTIG 1139
I + +TV ++LW AT E L D+ VV + F+ L+ G
Sbjct: 165 NDHIT---NGRETVVVALWGPHATQFHAENLQQQADNGHVVMLFVGLTVKFRDRQLALQG 221
Query: 1138 RSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSD 959
+ P+ P + + G + I A G A K SD + +
Sbjct: 222 STVCRWYPNAPIQETISLISSLHGNPQVVRMIEANFGQKEAINVK--VSD---ICDLNPH 276
Query: 958 PAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL 779
A+G + + II + P + WY AC+T K+ T G+ Y C C + E
Sbjct: 277 EALGNS----YVVNIIIRDLVPAEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIE--T 329
Query: 778 RYIMVIKLSDPTG-------EAWVSVFNEHAEKIIG 692
RY +VI DP+ A + F E E++IG
Sbjct: 330 RYRVVIMGIDPSDLANDQAKAAEFTFFGEIGEQLIG 365
>ref|XP_470466.1| expressed protein, with alternative splicing isoforms [Oryza sativa
(japonica cultivar-group)]
Length = 599
Score = 48.5 bits (114), Expect = 8e-04
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 9/276 (3%)
Frame = -1
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELV-DIVGVVQSVSPTLSVRRKIDNETIP 1316
+ E+ + P ++ D+L ++++ D +G++ ++ P +V + +
Sbjct: 159 VTEDTGPPSTFPSYACKILSFDELRARAYKKDIISDAIGIMTAIGPVQTVSYAGVMKAVL 218
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQE-LLDMVDSSPVVAIKSLKVSDFQGVSLSTIG 1139
I + +TV ++LW AT E L D+ VV + F+ L+ G
Sbjct: 219 NDHIT---NGRETVVVALWGPHATQFHAENLQQQADNGHVVMLFVGLTVKFRDRQLALQG 275
Query: 1138 RSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSD 959
+ P+ P + + G + I A G A K SD + +
Sbjct: 276 STVCRWYPNAPIQETISLISSLHGNPQVVRMIEANFGQKEAINVK--VSD---ICDLNPH 330
Query: 958 PAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL 779
A+G + + II + P + WY AC+T K+ T G+ Y C C + E
Sbjct: 331 EALGNS----YVVNIIIRDLVPAEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIE--T 383
Query: 778 RYIMVIKLSDPTG-------EAWVSVFNEHAEKIIG 692
RY +VI DP+ A + F E E++IG
Sbjct: 384 RYRVVIMGIDPSDLANDQAKAAEFTFFGEIGEQLIG 419
>gb|AAS01985.2| expressed protein, with alternative splicing isoforms [Oryza sativa
(japonica cultivar-group)]
Length = 420
Score = 48.5 bits (114), Expect = 8e-04
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 9/276 (3%)
Frame = -1
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELV-DIVGVVQSVSPTLSVRRKIDNETIP 1316
+ E+ + P ++ D+L ++++ D +G++ ++ P +V + +
Sbjct: 10 VTEDTGPPSTFPSYACKILSFDELRARAYKKDIISDAIGIMTAIGPVQTVSYAGVMKAVL 69
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQE-LLDMVDSSPVVAIKSLKVSDFQGVSLSTIG 1139
I + +TV ++LW AT E L D+ VV + F+ L+ G
Sbjct: 70 NDHIT---NGRETVVVALWGPHATQFHAENLQQQADNGHVVMLFVGLTVKFRDRQLALQG 126
Query: 1138 RSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSD 959
+ P+ P + + G + I A G A K SD + +
Sbjct: 127 STVCRWYPNAPIQETISLISSLHGNPQVVRMIEANFGQKEAINVK--VSD---ICDLNPH 181
Query: 958 PAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL 779
A+G + + II + P + WY AC+T K+ T G+ Y C C + E
Sbjct: 182 EALGNS----YVVNIIIRDLVPAEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIE--T 234
Query: 778 RYIMVIKLSDPTG-------EAWVSVFNEHAEKIIG 692
RY +VI DP+ A + F E E++IG
Sbjct: 235 RYRVVIMGIDPSDLANDQAKAAEFTFFGEIGEQLIG 270
>ref|NP_189797.1| unknown protein [Arabidopsis thaliana]
emb|CAB91582.1| putative protein [Arabidopsis thaliana]
Length = 448
Score = 47.8 bits (112), Expect = 0.001
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 20/231 (8%)
Frame = -1
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSL--STI 1142
K + + D++ + + +LW A + D + ++ +K+ ++GV ++
Sbjct: 84 KIEFELHDETDERIGCTLWGTFAEQIFRACQDSNRGMVICILRFVKIKSYKGVRTLSNSF 143
Query: 1141 GRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRV----FLS 974
+ + +NP EA + S+G L+ IS E R ++ + + V +L
Sbjct: 144 DVTQVHVNPPSSEAVFFQQALPSDG----LSLISRE----RQPRWEMVVNKDVDWLDYLR 195
Query: 973 HITSDPAMGQE---KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGS-------- 827
+ SD E V ++YAI + D +Y +C TCNKKV
Sbjct: 196 NSISDLKCSIEIGKARVLCTIYAIDT----DWAWYYISCKTCNKKVNHIHAGVHGVNNKG 251
Query: 826 ---GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
+WC+ C+ + RY++ + D TGEA +F+ ++ G SA
Sbjct: 252 KKPRFWCDTCKTVVTNVIPRYMLYANVMDNTGEAKFLLFDSICSELTGESA 302
>gb|EAS00303.1| hypothetical protein TTHERM_00218760 [Tetrahymena thermophila SB210]
Length = 676
Score = 47.8 bits (112), Expect = 0.001
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Frame = -1
Query: 952 MGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+GQ+K F +Y + I+ ++Y CT K V + G ++CE CQ+ + +
Sbjct: 504 IGQKKE--FYVYGNLVSIQMKNKLYYYRCTCQGKSVLKYHGDSFFCESCQQFINP-QVHL 560
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKII-----GCSADELDRIRK---EEGDDSYVLKL-KE 620
++ + D TG V +F++ + ++I E + K E G + + +L +
Sbjct: 561 MLRAFVQDSTGTIPVMIFDQQSSQLINQIDPSIHVQEAGQYVKNCIENGQEEIIRQLFSK 620
Query: 619 ATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 473
+ +F + E+ NE+ V + ESKYLL+++ L
Sbjct: 621 LDFARFIFEIQFENKEFNNEQEIAYKVLKIEKENIKEESKYLLKKLEHL 669
>ref|XP_213231.3| PREDICTED: similar to 60S ribosomal protein L3-like [Rattus
norvegicus]
Length = 816
Score = 47.8 bits (112), Expect = 0.001
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 17/271 (6%)
Frame = -1
Query: 1447 YNLVKIDQLGPYVGGRELVDIVGVVQSVSP----TLSVRRKIDNETIPKRDIVVADDSGK 1280
Y+L I G + GR +++++ V+SV T S RRK + ++ + D++
Sbjct: 526 YSLADIVANGHSLDGR-IINVLAAVRSVGEPKYFTTSDRRKGQ-----RCEVKLFDETEP 579
Query: 1279 TVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVS--DFQGVSLST-IGRSTLEINPDL 1109
+ T++ W++ + Q + V+ ++++ FQ +T I ++ + +NPD
Sbjct: 580 SFTMTCWDNESILLAQSWMAR---ETVIFASDVRINFNKFQNCMAATVISKTIITVNPDT 636
Query: 1108 PEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAM---GQEK 938
PEA N+ + E K+TS+A E+ + V+ A+ G+
Sbjct: 637 PEA-NILLNFIRENKETSIAD---EIDSYLKESVNLNTIVNVYTVEQLKGKALENEGKVD 692
Query: 937 PVFFSLYAIISHIKPDQ---NMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSEC---SLR 776
P + LYA IS + D + C++C V +A + C C K+ S L
Sbjct: 693 PFYGILYAYISTLNIDDETTKVVRNRCSSCGYIVNDASNT---CTICSKDSSRSRSFCLS 749
Query: 775 YIMVIKLSDPTGE-AWVSVFNEHAEKIIGCS 686
+ +++ L+D TG S+ AE+ +GC+
Sbjct: 750 FDVLVDLTDHTGTLRSCSLSGSVAEETLGCT 780
>ref|NP_913628.1| B1008C01.13 [Oryza sativa (japonica cultivar-group)]
Length = 780
Score = 47.4 bits (111), Expect = 0.002
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 10/236 (4%)
Frame = -1
Query: 1288 SGKTVTISLWNDLATTTG-QELLDMVDSSPVVAI-KSLKVSDFQGVSLSTIGRSTLEINP 1115
S + ++LW + AT+ E++ P +AI V + +SLS IN
Sbjct: 86 SDTILNVALWGERATSFPVDEVVAAGQKEPQIAIFVGTLVRGYGDISLSGNSACKWYINV 145
Query: 1114 DLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKP 935
+ PE + K + + + + A VGA R G + + L+ P M ++
Sbjct: 146 NTPEVNSFKESIQGKYEPIKMIELPA-VGAVRTGAEQKSIAQIKDLN-----PFMFRKNE 199
Query: 934 VFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKL 755
F + +I I + + WY AC TC K+ + +G Y R + +
Sbjct: 200 --FMVTVVIKKIDTESSWWYPACDTC-KRTAKPYGKSY--------------RIKLSLIA 242
Query: 754 SDPTGEAWVSVFNEHAEKIIGCSADEL--------DRIRKEEGDDSYVLKLKEATW 611
D TG+ +F A++IIG + L + I KE D L KE TW
Sbjct: 243 GDDTGDTKFVLFGRTAQRIIGRPVEMLIQNNPAGIEFIPKEITD----LLEKEFTW 294
>ref|NP_922202.1| putative replication protein [Oryza sativa (japonica cultivar-group)]
gb|AAG13631.1| putative replication protein [Oryza sativa (japonica cultivar-group)]
gb|AAP54489.1| replication protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 867
Score = 47.4 bits (111), Expect = 0.002
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Frame = -1
Query: 1288 SGKTVTISLWNDLATTTG-QELLDMVDSSPVVAI-KSLKVSDFQGVSLSTIGRSTLEINP 1115
S + ++LW + AT+ E++ P +AI V + +SLS IN
Sbjct: 86 SDTILNVALWGERATSFPVDEVVAAGQKEPQIAIFVGTLVRGYGDISLSGNSACKWYINV 145
Query: 1114 DLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKP 935
+ PE + K + + + + A VGA R G + + L+ P M ++
Sbjct: 146 NTPEVNSFKESIQGKYEPIKMIELPA-VGAVRTGAEQKSIAQIKDLN-----PFMFRKNE 199
Query: 934 VFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKL 755
F + +I I + + WY AC +C K+ + +G Y R+ + +
Sbjct: 200 --FMVTVVIKKIDTESSWWYPACDSC-KRTAKPYGKSY--------------RFKLSLIA 242
Query: 754 SDPTGEAWVSVFNEHAEKIIGCSADEL--------DRIRKEEGDDSYVLKLKEATW 611
D TG+ +F A++IIG + L + I KE D L KE TW
Sbjct: 243 GDDTGDTKFVLFGRTAQRIIGRPVEMLIQNNPAGIEFIPKEITD----LLEKEFTW 294
>gb|AAG00002.2| Hypothetical protein R03H10.6 [Caenorhabditis elegans]
ref|NP_494733.2| R03H10.6 [Caenorhabditis elegans]
Length = 324
Score = 47.0 bits (110), Expect = 0.002
Identities = 31/136 (22%), Positives = 64/136 (47%)
Frame = -1
Query: 1567 GSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVD 1388
G ++ + + + +E+ L+E +E A +P + N V + + R+ +D
Sbjct: 191 GKVKNGHTLYNQTGHAFEIILDEFPTIEPAPAVLTVPKLNLNRVMLCNVQNEQYYRKPID 250
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
++ V+ ++ L I+N+ R++VV DDS + ++LW A +G E
Sbjct: 251 VIVAVEEINDFLDDYHPIENKPPVLRNMVVIDDSNFRIRLTLWGYRAMDSGVEEF----Q 306
Query: 1207 SPVVAIKSLKVSDFQG 1160
+ +VA K + + F+G
Sbjct: 307 NKIVAFKGIVPTQFEG 322
>gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa (japonica
cultivar-group)]
Length = 296
Score = 47.0 bits (110), Expect = 0.002
Identities = 32/155 (20%), Positives = 71/155 (45%)
Frame = -1
Query: 949 GQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYI 770
G ++ VF S+ I ++ + WY +C CNK V + Y C C K + RY
Sbjct: 7 GSQEFVFTSIVTI-DRVQENIQWWYMSCNLCNKIVIQK-NDKYHCRNCNKYPENTTPRYR 64
Query: 769 MVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRV 590
+ +++SD T ++F++ A+ ++ L + + D+ + +++ +F+
Sbjct: 65 LRLQISDHTTSTSCTIFDDVAQSMLETPVSSLLNLLDGKNDEIPNI-IQQLCGKQLIFKF 123
Query: 589 SVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEE 485
+++ + + E V+ D+ E +YL+ +
Sbjct: 124 KLSE-QNLTEGTPNYVVKKTFVPDYMLEKQYLINK 157
>dbj|BAB01022.1| replication protein A1-like [Arabidopsis thaliana]
Length = 452
Score = 45.8 bits (107), Expect = 0.005
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 15/227 (6%)
Frame = -1
Query: 1267 SLWNDLATTTGQELLDMVDSSPVVAIKSLKVS---DFQGVSLSTIGRSTLEINPDLPEAK 1097
+LW A Q + D V I+ K++ D + VS ++ S + ++ L E
Sbjct: 114 TLWGKYAEIVDQACQESTDGIVVCLIRFAKINLYNDTRSVS-NSFDVSQVFVDHTLAELG 172
Query: 1096 NLKSWYDSEGKDT-SLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSL 920
K ++G S + A R G Y R + + + +G+ K V
Sbjct: 173 LFKQSIPTDGLTLGSSGSFHKRLYAPRTGDDDGDYP-RQTIKEVLTFSDVGKCKTV---- 227
Query: 919 YAIISHIKPDQNMWYRACTTCNKKVTEAFG-----------SGYWCEGCQKNDSECSLRY 773
+S I D +Y C NKKV + +WCE C ++
Sbjct: 228 -CTVSAIDTDWPWYYFCCRAHNKKVVKEEAIKFEDVKLPQKPRFWCEICNGFAKSVVPKF 286
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVL 632
+ + + D TGEA +F+ HA++I+G +A +L +E +D VL
Sbjct: 287 WLHLHIMDQTGEAKCMLFDSHAKEILGITAHDLLAGSFDEIEDPTVL 333
>ref|XP_789630.1| PREDICTED: similar to Replication protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein), partial
[Strongylocentrotus purpuratus]
Length = 69
Score = 45.4 bits (106), Expect = 0.007
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVKIDQL 1421
VS+G+L+ AN+Q+ ++ NDYEL+ N + +VE E + +P VQ++ I L
Sbjct: 8 VSRGTLKPANRQYTSINNDYELTFNNDTMVEPCVEEDVSIPAVQFDFKSISHL 60
>ref|NP_198305.1| unknown protein [Arabidopsis thaliana]
Length = 426
Score = 45.1 bits (105), Expect = 0.009
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 15/223 (6%)
Frame = -1
Query: 1180 KVSDFQGV-SLS-TIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGF 1007
K+ ++GV SLS + S + INPD PE + S ++G + V +
Sbjct: 118 KIKSYKGVRSLSNSFDASQVHINPDFPEVQAFVSRLHADGFSLTFRE---SVPKFQMVTV 174
Query: 1006 KSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGS 827
K + + D E V ++YA+ D + +Y +C CNKKVT
Sbjct: 175 KQDDDCKQYERKSICDLLHSMEVRVVCTIYAL----DLDWSWYYFSCRNCNKKVTHIHAG 230
Query: 826 -----------GYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG--CS 686
+WC+ + + +Y++ +K+ D TGE +F+ ++G C+
Sbjct: 231 VNTTSLKSSKPRFWCDVYKNAVTNVQAKYMLYVKVMDGTGETKCLLFDTIYADMVGESCT 290
Query: 685 ADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEK 557
+ + E + L+ LF VSV + + K
Sbjct: 291 SMLGGSFNETEDPNDVPDGLRNLVGKTFLFLVSVEKENIWDSK 333
>ref|NP_918352.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 635
Score = 44.3 bits (103), Expect = 0.015
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Frame = -1
Query: 1282 KTVTISLWNDLATT-TGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPD 1112
+T I LW + AT+ E+L P + I + G ++S G S + IN D
Sbjct: 91 ETTNIVLWGERATSFPADEILSAGKEKPQIVIFVGTLVRGHGWNVSLSGNSACKWYINID 150
Query: 1111 LPEAK-NLKSWYDS-EGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEK 938
+PE +++ Y++ + D API ++ ++ I DP + K
Sbjct: 151 VPEVNTSVEGNYEAIKWIDLPAAPILQN------------NCEQKTIAEIR-DPHPFKFK 197
Query: 937 PVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIK 758
FS+ +I + + + WY AC C KK + +G+ Y R+ + +
Sbjct: 198 KHEFSVTVVIKKLNMEYSWWYTACDIC-KKTAKPYGNLY-------------RRFKLSVI 243
Query: 757 LSDPTGEAWVSVFNEHAEKIIGCSADEL 674
D TG+ +F A+++IG S + L
Sbjct: 244 AGDDTGDTTFIIFGHLAQRLIGRSVEAL 271
>ref|XP_471182.1| OSJNBa0095H06.12 [Oryza sativa (japonica cultivar-group)]
emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa (japonica cultivar-group)]
Length = 1724
Score = 43.9 bits (102), Expect = 0.019
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Frame = -1
Query: 1540 FKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGRE-LVDIVGVVQS 1367
+K N Y + L VE+ E P +NLV+ L VG +E D++G++
Sbjct: 1333 YKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSDLSQRVGMQEYFTDVIGMIIG 1392
Query: 1366 VSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMV-DSSPVVAI 1190
VS VR PKR I + D + V + LW + A + + V + VV I
Sbjct: 1393 VSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHALDFDADAVHSVGQDNVVVGI 1452
Query: 1189 KSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEG 1067
+ +LS +N D+PE + ++DS G
Sbjct: 1453 FVGTLMKAYNKTLSGGSACKWYLNEDIPE---INQFFDSLG 1490
>ref|XP_477680.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC10358.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 640
Score = 43.9 bits (102), Expect = 0.019
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 3/206 (1%)
Frame = -1
Query: 1282 KTVTISLWNDLATT-TGQELLDMVDSSP--VVAIKSLKVSDFQGVSLSTIGRSTLEINPD 1112
+T I+LW + AT+ E++ P V+ + +L + VSLS IN D
Sbjct: 87 ETTNIALWGERATSFPADEIVSAGKHQPQIVIFVGTLVRGHGRNVSLSGNSACKWYINID 146
Query: 1111 LPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPV 932
PE +KS+ + + + + A G K++ R + K
Sbjct: 147 TPE---VKSFVEGSYEPIKWLDLPSGPAAHNNGEEKTIAEIRELHPF--------KFKKH 195
Query: 931 FFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLS 752
F + +I + + + WY AC C KK + +GS Y R+ + +
Sbjct: 196 EFLVTVVIKKLNMEYSWWYTACDIC-KKTAKPYGSSY-------------SRFKLSVIAG 241
Query: 751 DPTGEAWVSVFNEHAEKIIGCSADEL 674
D T + VF A+++IG S D L
Sbjct: 242 DHTADTTFIVFGRLAQRLIGRSVDAL 267
>ref|XP_778757.1| hypothetical protein GLP_82_33470_32019 [Giardia lamblia ATCC 50803]
gb|EAA41969.1| GLP_82_33470_32019 [Giardia lamblia ATCC 50803]
Length = 483
Score = 43.9 bits (102), Expect = 0.019
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 27/282 (9%)
Frame = -1
Query: 1309 DIVVADDSGKTVTISLWNDL------ATTTGQELLDMVDSSPVVAIKSLKV--SDFQGVS 1154
D++V D +G + +S+W++ A ++ +D + +V ++ S+ G+
Sbjct: 196 DLLVVDKTGN-IKVSIWSEQLEPFLSAYNFTKDNVDTHLTGKIVVFSRVQFRSSERYGIQ 254
Query: 1153 LSTIGRSTLEINPDLP----EAKNLKS----WYDSEGKDT-------SLAPISAEVGATR 1019
S + + + D P E NLK W E K+ ++ P S
Sbjct: 255 CSCTSHTKIFLVTDAPSKPDELGNLKDFRFWWASQEAKEACANLSGANMEPNSPRRDDRG 314
Query: 1018 AGGFKSM-YSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNM---WYRACTTCNK 851
AGG+K+M YS L+ +S+P L A++S + D+N+ YR C +C
Sbjct: 315 AGGWKTMPYSTLGELA--SSEP-----------LRALVSLVL-DRNLELATYRGCASCKC 360
Query: 850 KVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELD 671
+ ++ C CQ+ + + + +SD +++F+ +A ++G SADE
Sbjct: 361 ALRDS----PICPKCQETSAGEKYYWRIGGNISDVLAHTRITIFDPYASTLMGMSADEF- 415
Query: 670 RIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRI 545
E GDD + L + V V +TQ +Y R +
Sbjct: 416 ---MERGDDEKLHLLSKVLEVD--VAVKMTQGKYDGRDRTNL 452
>dbj|BAB30034.1| unnamed protein product [Mus musculus]
ref|XP_128478.3| PREDICTED: hypothetical protein LOC75178 [Mus musculus]
ref|XP_919673.1| PREDICTED: similar to CG15329-PA [Mus musculus]
Length = 226
Score = 43.1 bits (100), Expect = 0.033
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Frame = -1
Query: 1159 VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP--ISAEVGATRAGGFKSMYS-D 989
++ + I ++ + +NPD PEA N+ Y E K+T++A S + +Y+ +
Sbjct: 1 MAATVISKTIITVNPDTPEA-NILLNYIRENKETNVADEIDSYLKESVNLNTIVDVYTVE 59
Query: 988 RVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQ---NMWYRACTTCNKKVTEAFGSGYW 818
++ + + S+ G+ P + LYA IS + D + C++C V EA +
Sbjct: 60 QLKVKALKSE---GKADPFYGILYAYISTLNIDDETTKVVRNRCSSCGYIVNEASNT--- 113
Query: 817 CEGCQKNDSECS---LRYIMVIKLSDPTGEAW-VSVFNEHAEKIIGCSADELDRIRKEE 653
C C ++ S L + +++ L+D TG S+ AE+ +GC+ +E + E+
Sbjct: 114 CTICNQDSSRLKSFFLSFDVLVDLTDHTGTLHSCSLSGSIAEETLGCTINEFLTMTSEQ 172
>ref|XP_731701.1| hypothetical protein PC300559.00.0 [Plasmodium chabaudi chabaudi]
emb|CAH83538.1| hypothetical protein PC300559.00.0 [Plasmodium chabaudi]
Length = 90
Score = 42.7 bits (99), Expect = 0.043
Identities = 18/39 (46%), Positives = 32/39 (82%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAE 1475
G+ ++SKG+++ ANK+F T+K+D E++L+EN+I+E E
Sbjct: 44 GKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLE 82
>ref|XP_656777.1| replication factor A-related protein [Entamoeba histolytica
HM-1:IMSS]
gb|EAL51392.1| replication factor A-related protein [Entamoeba histolytica
HM-1:IMSS]
Length = 569
Score = 42.4 bits (98), Expect = 0.056
Identities = 55/265 (20%), Positives = 103/265 (38%), Gaps = 27/265 (10%)
Frame = -1
Query: 1336 IDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGV 1157
++N K DI++ D+S ++ I ++++ + E +++ + K +K +
Sbjct: 297 LNNTNKDKTDIIIGDESEYSINIQIFSNTLVSLVNEKININSIVLITKCKVIKTKNGDNY 356
Query: 1156 SLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVG-------------ATRA 1016
S + I + N S+ + SL I + +
Sbjct: 357 FGELKKGSQITIINKYSDIPNYVQLLYSQQRYESLLNIKKDSAHILFNELSKKLRKSNEV 416
Query: 1015 GGFKSM--YSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVT 842
G K + Y D V + + P F + A I IK + ++ Y C TC K
Sbjct: 417 IGIKGLKEYCDEVKMRN--------NNHPATFIIKARIKIIKTN-DLTYYGCETCRSKKE 467
Query: 841 EAFGSGYWCEGCQKNDSECSLRYIMVIKLS----DPTGEAWVSVFNEHAEKIIGCSADEL 674
E + +C C + + L Y + + L + + E W +F+E A K+ SADE+
Sbjct: 468 EGYS---YCNKCNRKRNG-KLYYKVNVLLENNEEEESFEQWAIIFDECARKLFNMSADEM 523
Query: 673 -----DRIRKEEG---DDSYVLKLK 623
D ++KE ++LK+K
Sbjct: 524 NVLDEDDVKKEMNKFIGKEFILKVK 548
>ref|NP_189826.1| unknown protein [Arabidopsis thaliana]
emb|CAB87732.1| putative replication protein [Arabidopsis thaliana]
Length = 409
Score = 41.6 bits (96), Expect = 0.096
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Frame = -1
Query: 892 DQNMWYRACTTCNKKVTEAFGS-----------GYWCEGCQKNDSECSLRYIMVIKLSDP 746
D + +Y +C CNKKVT +WC+ C+ + +Y++ +K+ D
Sbjct: 191 DWSWYYFSCRNCNKKVTHIHAGVNTTSSKSSKPRFWCDVCKNAVTNVQAKYMLYVKVMDD 250
Query: 745 TGEAWVSVFNEHAEKIIGCSADEL 674
+GE +F+ ++G S +
Sbjct: 251 SGETKFLLFDTICADMVGESCTSM 274
>dbj|BAD45339.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 457
Score = 41.2 bits (95), Expect = 0.13
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 4/215 (1%)
Frame = -1
Query: 1483 EAEGETFLPPVQYNLVKIDQ-LGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRD 1307
E+ G T +P ++ D+ LG + + L+D++GV+ + P V D + R
Sbjct: 109 ESRGLT-IPKFFFDFCPFDEVLGKNISSKPLIDLIGVISYIGPYDFVSPTSDKKL---RR 164
Query: 1306 IVVADDSGKTVTISLWNDLATTTGQE--LLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
I + + +T + LW + ++ L D V L F ++ ++ +
Sbjct: 165 IKIQNLEEQTQDVLLWGQYGESFNEDATLHKSKDEIVVAIFAGLTAGKFSAITEASSSSA 224
Query: 1132 T-LEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDP 956
T + I+ D P+ + ++ Y E + T + + T MY+ LS I++ P
Sbjct: 225 TEIYIDLDTPQVREFRTSYQWE-RPTLEQQLPKVIRLTPIQAAGKMYT----LSEISAMP 279
Query: 955 AMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNK 851
+ +S A I+ I +Y C C+K
Sbjct: 280 ISAFQGGATYSTTAKITAILSSIKWYYIGCHRCDK 314
>gb|AAL82144.1| replication factor A related protein [Pyrococcus furiosus DSM 3638]
ref|NP_579749.1| hypothetical protein PF2020 [Pyrococcus furiosus DSM 3638]
Length = 358
Score = 40.8 bits (94), Expect = 0.16
Identities = 81/347 (23%), Positives = 136/347 (39%), Gaps = 9/347 (2%)
Frame = -1
Query: 1531 VKNDYELSLNENAIVEEAE--------GETFLPPVQYNLVKIDQLGPYVGGRELVDIVGV 1376
++N + EN I E A G + L+KI L P + E V+IVG
Sbjct: 25 IENQIRQIMRENNISEHAAALLLAERLGVEVTKREEQPLMKISDLYPGMDPHE-VNIVGR 83
Query: 1375 VQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVV 1196
+ P +K D +V+ DD+G+ + LW+ ++L+ V
Sbjct: 84 ILKKYPPREYTKK-DGSIGRVASLVIYDDTGRARVV-LWDS-------KVLEYYSKLEVG 134
Query: 1195 AIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRA 1016
+ +KV D Q V S G L IN A+ +K+ D +D + P+ AT
Sbjct: 135 DV--IKVLDAQ-VRESLSGLPELHINF---RARIIKNPDDPRVQD--IPPLEEVRVATYT 186
Query: 1015 GGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEA 836
R +S + + + +Y ++ Y AC C KKV
Sbjct: 187 ---------RKKISEVEPGDRFVELRGTIAKVYRVLV---------YDACPECKKKVDYD 228
Query: 835 FGSGYWCEGCQKNDSECSLRY-IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 659
G W C ++ ++ I+ L D +G +++F + AE+++G +E+ + K
Sbjct: 229 PGMDVWI--CPEHGEVEPIKITILDFGLDDGSGYIRITLFGDDAEELLGVGPEEIAQKLK 286
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
E +S + LKEA + + E+ N + I VRG D
Sbjct: 287 EM--ESMGMTLKEAA-------RKLAEEEFYNIIGKEIIVRGNVIED 324
>ref|XP_473791.1| OSJNBb0015N08.3 [Oryza sativa (japonica cultivar-group)]
emb|CAE03875.2| OSJNBb0015N08.3 [Oryza sativa (japonica cultivar-group)]
Length = 696
Score = 40.8 bits (94), Expect = 0.16
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Frame = -1
Query: 1393 VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATT-TGQELLDM 1217
VD++G + +VS + + + +R + + D SGKT+ +SL A G+ +L++
Sbjct: 332 VDVIGKIIAVSNAAMISTSSSDYRM-RRIVKLQDLSGKTIDLSLSGKRAVEFDGETILEV 390
Query: 1216 VDSSPVVAI---KSLKV--SDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSL 1052
++ ++AI S+K+ ++ +S +T R + N D+PE K +
Sbjct: 391 GQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYINEN-DIPEIKMFQKCLPPHADPIQK 449
Query: 1051 APISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYR 872
+ ++ R+ K++ L I DP + +++ + A I I+ + Y+
Sbjct: 450 LYLQSDEDMQRSIEHKTLAE----LKEI--DPFVDKDEK--YQCTATIIGIQERKTWCYQ 501
Query: 871 ACTTCNKKVTEAFGSGYWCEGCQKNDSEC---SLRYIMVIKLSDPTGEAWVSVFNEHAEK 701
AC CN K+ G + C+K + C +Y + +D T + +F + +
Sbjct: 502 ACKLCNCKM---IWDGSILK-CKKENCPCRQYEYKYKIPFIANDGTASLELVLFEKKGTE 557
Query: 700 IIGCSADELDR 668
+IG +A+ + R
Sbjct: 558 LIGRTAETMKR 568
>dbj|BAB47563.1| RPA41 [Pyrococcus furiosus]
Length = 360
Score = 40.8 bits (94), Expect = 0.16
Identities = 81/347 (23%), Positives = 136/347 (39%), Gaps = 9/347 (2%)
Frame = -1
Query: 1531 VKNDYELSLNENAIVEEAE--------GETFLPPVQYNLVKIDQLGPYVGGRELVDIVGV 1376
++N + EN I E A G + L+KI L P + E V+IVG
Sbjct: 27 IENQIRQIMRENNISEHAAALLLAERLGVEVTKREEQPLMKISDLYPGMDPHE-VNIVGR 85
Query: 1375 VQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVV 1196
+ P +K D +V+ DD+G+ + LW+ ++L+ V
Sbjct: 86 ILKKYPPREYTKK-DGSIGRVASLVIYDDTGRARVV-LWDS-------KVLEYYSKLEVG 136
Query: 1195 AIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRA 1016
+ +KV D Q V S G L IN A+ +K+ D +D + P+ AT
Sbjct: 137 DV--IKVLDAQ-VRESLSGLPELHINF---RARIIKNPDDPRVQD--IPPLEEVRVATYT 188
Query: 1015 GGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEA 836
R +S + + + +Y ++ Y AC C KKV
Sbjct: 189 ---------RKKISEVEPGDRFVELRGTIAKVYRVLV---------YDACPECKKKVDYD 230
Query: 835 FGSGYWCEGCQKNDSECSLRY-IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 659
G W C ++ ++ I+ L D +G +++F + AE+++G +E+ + K
Sbjct: 231 PGMDVWI--CPEHGEVEPIKITILDFGLDDGSGYIRITLFGDDAEELLGVGPEEIAQKLK 288
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVD 518
E +S + LKEA + + E+ N + I VRG D
Sbjct: 289 EM--ESMGMTLKEAA-------RKLAEEEFYNIIGKEIIVRGNVIED 326
>ref|XP_466063.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25422.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD25605.1| replication protein-like [Oryza sativa (japonica cultivar-group)]
Length = 176
Score = 40.4 bits (93), Expect = 0.21
Identities = 46/191 (24%), Positives = 77/191 (40%)
Frame = -1
Query: 1291 DSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPD 1112
+S T+ +SLW + A+ + + G++LS IN D
Sbjct: 12 NSNSTLNVSLWAEQASAFEADAIHKA-----------------GLALSGGSACKWYINID 54
Query: 1111 LPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPV 932
+P LK D G T+ PI+ RA + + ++ + +P + K V
Sbjct: 55 VPAIVELK---DKTG--TNFQPINWIEAPARAA-VEEVAENKTVRELLEINPH--KCKKV 106
Query: 931 FFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLS 752
F + + I D+ WY +C C K V + +GS Y C C N + RY +V+
Sbjct: 107 RFQAHVTVRRICNDKCWWYGSCQRCFK-VAKPYGSTYKCTSC-SNIAVAVPRYRIVVIAG 164
Query: 751 DPTGEAWVSVF 719
D + +A +F
Sbjct: 165 DDSDDAMFVLF 175
>ref|XP_481696.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD03911.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAD01693.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 445
Score = 39.7 bits (91), Expect = 0.37
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 4/174 (2%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVKIDQLGPYVGGREL-V 1391
++R AN+ ++ V N + ++ EE E P + ++L + V V
Sbjct: 80 TVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYV 139
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GV+ V VR K N KR I + D S GQ
Sbjct: 140 DVMGVITEVGSPTVVRPKSRNADSLKRTIQICDAS---------------AGQ------T 178
Query: 1210 SSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTS 1055
+ V+ V D+ G+ L+ G S + +N D+PE LK + + + S
Sbjct: 179 QAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPVS 232
>gb|AAT43258.1| replication factor A, large subunit [Picrophilus torridus DSM 9790]
ref|YP_023451.1| hypothetical protein PTO0673 [Picrophilus torridus DSM 9790]
Length = 145
Score = 39.7 bits (91), Expect = 0.37
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = -1
Query: 1441 LVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISL 1262
+ KI L P V++VG V SVS ++ + E ++V+ADD+GK +T++L
Sbjct: 4 ITKIKDLNP---SSRRVNVVGKVVSVSEPKEIKTRF-GEDKAVTEVVIADDTGK-ITLTL 58
Query: 1261 WNDLATTTGQELLDMVDSSPVVAIKS---LKVSDFQGVSLSTIGRSTLEINPDL 1109
WN+ A + +D+ V ++ L V + +S + +E N DL
Sbjct: 59 WNEQADNVKDAVALRIDNGYVSLLRGHMRLNVGKYGSLSQTD---DEIEANEDL 109
>gb|EAS06917.1| hypothetical protein TTHERM_00726370 [Tetrahymena thermophila
SB210]
Length = 580
Score = 39.3 bits (90), Expect = 0.48
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Frame = -1
Query: 988 RVFLSHITSDPAMGQE--KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWC 815
R+ L+H T DPA +E K ++ + I ++ +Y AC+ C KK+
Sbjct: 396 RLSLTHSTQDPAFIKEFTKCIYSEIEGEIYSAGIEKKPFYVACSVCKKKIEN-------Y 448
Query: 814 EGCQKNDSECSLRYIMV-----IKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEG 650
QK +C+ I+ + ++D TG FNE E+I G A E +I E
Sbjct: 449 PVIQKCFKKCAGATIIAKMATNLNIADATGALSALAFNEQCEEIFGFDA-EFMKILYEYK 507
Query: 649 DDSYVLKLKEATWVPHLFRVSVTQ 578
+ Y K K+ T+ R S TQ
Sbjct: 508 NSQYYHK-KDPTY-RDFIRQSFTQ 529
>ref|NP_918821.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1955
Score = 39.3 bits (90), Expect = 0.48
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 26/194 (13%)
Frame = -1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGP 1415
G+ + S++ AN+ ++ V N + + +EE + P + ++L +
Sbjct: 1486 GKVYYIDSFSVKYANRTYRPVTNLLMILFTKWTTLEECIDVLGDYPGITFSLTPFQDIPS 1545
Query: 1414 YVGGREL-VDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVAD------------------ 1292
+ +D++GV+ +S T +VR + N KR I + +
Sbjct: 1546 LIDKNTFYIDVMGVITKISDTATVRPRSSNTNSLKRTIQICEASHPAKLTVSKLKNFLAT 1605
Query: 1291 --DSGKTVTISLWNDLATT-TGQELLDMVDSSPVVAI-KSLKVSDFQGVSLSTIGRSTLE 1124
+S T+ I+LW A +E+ + P VA+ V ++ G+ L+ G S +
Sbjct: 1606 YKNSNSTLHITLWGKTAAAFNAEEVHKAGQTRPQVAVFVGTLVRNYTGIGLTLTGSSPCK 1665
Query: 1123 --INPDLPEAKNLK 1088
I D+ EA LK
Sbjct: 1666 WYIGLDMVEALELK 1679
>gb|AAH29829.1| Hypothetical protein MGC35212 [Homo sapiens]
ref|NP_689977.1| hypothetical protein LOC254528 [Homo sapiens]
Length = 198
Score = 38.9 bits (89), Expect = 0.62
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Frame = -1
Query: 1159 VSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVF 980
++ + I ++ + NPD+PEA N+ + E K+T++ + E+ S + + +
Sbjct: 1 MTATVISKTIITTNPDIPEA-NILLNFIRENKETNV--LDDEI--------DSYFKESIN 49
Query: 979 LSHITSDPAM-----------GQEKPVFFSLYAIISHIKPDQ---NMWYRACTTCNKKVT 842
LS I + G+ P + LYA IS + D + C++C V
Sbjct: 50 LSTIVDVYTVEQLKGKALKNEGKADPSYGILYAYISTLNIDDETTKVVRNRCSSCGYIVN 109
Query: 841 EAFGSGYWCEGCQKNDSECS---LRYIMVIKLSDPTGEAW-VSVFNEHAEKIIGCS 686
EA C C KN + L + ++I L+D TG S+ AE+ +GC+
Sbjct: 110 EA---SNMCTTCNKNSLDFKSVFLSFHVLIDLTDHTGTLHSCSLTGSVAEETLGCT 162
>ref|NP_920307.1| putative DNA binding protein [Oryza sativa (japonica cultivar-group)]
gb|AAN09856.1| putative DNA binding protein [Oryza sativa (japonica cultivar-group)]
gb|AAP52594.1| DNA binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 454
Score = 38.5 bits (88), Expect = 0.82
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEE-AEGETFLPPVQYNLVKIDQLGPYVGGREL-V 1391
++R AN+ ++ V N+ + ++ +EE P + ++L + + V V
Sbjct: 80 TIRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPSITFSLTPFEDVPSLVEKNSFYV 139
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
DI+GV+ V ++R K N KR + + D S GQ
Sbjct: 140 DIMGVITEVGAVTTIRPKSRNAESLKRTLQIRDAS---------------AGQ------T 178
Query: 1210 SSPVVAIKSLKVSDFQGVSLSTIGRSTLE--INPDLPEAKNLKSWYDSEGKDTSLAPI 1043
+ VV V D++G+ L+ G S + IN ++P+ L +E T+ PI
Sbjct: 179 QAQVVVFVGTLVKDYRGLGLTLTGSSPCKWYINLNIPKVAEL-----NESFSTNFQPI 231
>ref|XP_875913.1| PREDICTED: hypothetical protein XP_870820 [Bos taurus]
Length = 323
Score = 38.1 bits (87), Expect = 1.1
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Frame = -1
Query: 1204 PVVAIKSLKVSDFQ---GVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+ +++S + ++ + I ++ + NPD PEA L ++ ++ + P+ E
Sbjct: 106 PVIFAADVRISFDKFRNSMTATVISKTIITTNPDTPEANILLNFI---RENKVMNPLDDE 162
Query: 1033 VG-----ATRAGGFKSMYS-DRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQ---NM 881
+ + +Y+ +++ + + ++ G+ +P + LYA IS + D +
Sbjct: 163 IDNYLKESMNLNTIVDVYTVEQLKVKALKNE---GKAEPFYGILYAYISTLNIDDETTKV 219
Query: 880 WYRACTTCNKKVTEAFGSGYWCEGCQKNDS---ECSLRYIMVIKLSDPTGEAW-VSVFNE 713
C+ C V EA + C C K+ S L + M+I L+D TG S+
Sbjct: 220 VRNRCSVCGYTVNEASST---CTTCNKDSSGFKSVFLSFDMLIDLTDHTGTLHSCSLTGS 276
Query: 712 HAEKIIGCS 686
AE+ +GC+
Sbjct: 277 VAEETLGCT 285
>ref|YP_437293.1| DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Hahella
chejuensis KCTC 2396]
gb|ABC32868.1| DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Hahella
chejuensis KCTC 2396]
Length = 1396
Score = 37.7 bits (86), Expect = 1.4
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Frame = -1
Query: 1513 LSLNENAIVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRR-- 1340
L ++ N I+ A G+ + P Q + LG Y RE ++ G S V+R
Sbjct: 483 LMMSTNNILSPANGDPIIVPSQDVV-----LGLYFMTRERINAKGEGMVFSDIKEVQRAY 537
Query: 1339 ---KIDNETIPK---RDIVVADDSGKTVTISLWNDLATTTGQELL 1223
K+D + K RD+V+ +D KTVT+S+ L TT G+ LL
Sbjct: 538 GAKKVDLQAKVKVRIRDVVIDEDRNKTVTVSV---LDTTVGRALL 579
>gb|ABB37948.1| heat shock protein HtpG [Desulfovibrio desulfuricans G20]
ref|YP_387643.1| heat shock protein HtpG [Desulfovibrio desulfuricans G20]
Length = 636
Score = 37.7 bits (86), Expect = 1.4
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Frame = -1
Query: 1333 DNETIPKRDIVVA-DDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGV 1157
D + + K+D A D+ G+ SL + + T G ++ D+ +S+ + + S G+
Sbjct: 485 DFDDVEKKDAPEALDEEGRKTLSSLLSHMKTLLGDKVEDVRESARLSDSPACLASKDGGM 544
Query: 1156 SLS------------TIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEV 1031
+ S ++ R LEINPD P +NL Y ++ D LA + ++
Sbjct: 545 TASMEKLMRVMNKDESVPRKVLEINPDHPLTRNLLRLYRADADDRLLAQATEQL 598
>ref|NP_917821.1| OSJNBb0035I14.14 [Oryza sativa (japonica cultivar-group)]
Length = 361
Score = 37.4 bits (85), Expect = 1.8
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = -1
Query: 949 GQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY- 773
G+E + + II + P + WY AC+ C K+ T G+ Y C C + E R
Sbjct: 157 GEETGNSYVVNIIIRDLVPAEPWWYIACSIC-KRGTAREGNAYKCPRCSTDAIETRYRVA 215
Query: 772 IMVIKLSDPTGE----AWVSVFNEHAEKIIG 692
IM I SD + A + F E E++IG
Sbjct: 216 IMGIDPSDLANDQAKAAEFTFFGEIGEQLIG 246
>ref|NP_850112.1| unknown protein [Arabidopsis thaliana]
gb|AAU44460.1| hypothetical protein AT2G28105 [Arabidopsis thaliana]
gb|AAX55130.1| hypothetical protein At2g28105 [Arabidopsis thaliana]
Length = 166
Score = 37.0 bits (84), Expect = 2.4
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -1
Query: 877 YRACTTCNKKV---TEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHA 707
YR C+ C + + F S +C+ C+ + + L Y +++ ++ V F+ A
Sbjct: 21 YRVCSRCQRVLPSDNNGFASSSFCKFCKSKEPK--LLYRILMSIATDASVKTVICFDRAA 78
Query: 706 EKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRI 545
+ GCSADE K + + + + R+++T+ + N + R+
Sbjct: 79 TVLFGCSADEFFHFTKL---NPLAASMVNQVFDGEMLRMTLTRPQNRNAQHMRV 129
>gb|AAU44445.1| hypothetical protein AT2G05642 [Arabidopsis thaliana]
Length = 364
Score = 37.0 bits (84), Expect = 2.4
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 24/126 (19%)
Frame = -1
Query: 979 LSHITSDPAMGQEKPVFF----------------SLYAIISHIKPDQNMWYRACTTCNKK 848
+S ITS + KP F ++ A I I +Y C C KK
Sbjct: 68 ISTITSSSSSKHSKPSFSLRDQKTIADINSGGACNIIASIFSIDTKVPWFYIGCNICFKK 127
Query: 847 V-------TEAFGSG-YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIG 692
V TE +G Y CE C + S R+ + + + D TGEA +F++ K+I
Sbjct: 128 VSPYFNPETEEIEAGKYECEKCDTFVTTTSTRFRVQVTVLDHTGEASFLLFDQDVIKLIH 187
Query: 691 CSADEL 674
S EL
Sbjct: 188 KSTYEL 193
>ref|XP_414840.1| PREDICTED: similar to hypothetical protein MGC35212 [Gallus gallus]
Length = 398
Score = 37.0 bits (84), Expect = 2.4
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -1
Query: 949 GQEKPVFFSLYAIISHIKPDQN---MWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSL 779
G+ +PVF +Y IS + D N + C+ C V E + +C + +
Sbjct: 238 GKPEPVFGIIYGYISMLDIDDNVSKVIRNRCSVCRFVVNEMSNTCTFCGDISSDSKSTFV 297
Query: 778 RYIMVIKLSDPTGEAWVSVFNE-HAEKIIGCSADE 677
+ +++ L+D TG + ++ AE+ +GC+ E
Sbjct: 298 SFDILVDLTDHTGTLYSCYLSDCIAEETLGCTVQE 332
>ref|NP_914915.1| P0506E04.19 [Oryza sativa (japonica cultivar-group)]
Length = 307
Score = 37.0 bits (84), Expect = 2.4
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -1
Query: 1561 LRIANKQFKTVKNDYELSLNENAIVEEAEGETF-LPPVQYNLVKIDQLGPYVGGRE-LVD 1388
++ +NK ++ V N ++ + VE+ F P V Y+L ++++ +V E VD
Sbjct: 67 VKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVD 126
Query: 1387 IVGVVQSVSPTLSVRRKIDNETIPKRDIVV 1298
++GV+ +S +R K + + KR + +
Sbjct: 127 VIGVITEISTPTMLRPKSRDASSLKRTVQI 156
>ref|ZP_00411872.1| Fibronectin, type III [Arthrobacter sp. FB24]
gb|EAL97195.1| Fibronectin, type III [Arthrobacter sp. FB24]
Length = 2041
Score = 37.0 bits (84), Expect = 2.4
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Frame = -1
Query: 1339 KIDNET----IPKRDIVVADDSG-----KTVTISLWNDLATTTGQELLDMVDSSPVVAIK 1187
K DNE + + ++ DSG KTVT+S+W+ TTTGQ +V+ P A+
Sbjct: 541 KADNEQDQVKVRRDGLLTYQDSGAASGKKTVTVSVWDGRDTTTGQV---VVNVQPPGALA 597
Query: 1186 SLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPIS----AEVGATR 1019
+ +D T + DL A LK+ D G LA + AE+G
Sbjct: 598 PVVNAD----------HVTAVVGQDLVIAP-LKNDVDPNGGALRLAQVEASGPAELGPVT 646
Query: 1018 AGG---FKSMYSDRVFLSHITSD 959
GG F+S + V+L++I S+
Sbjct: 647 DGGTFTFRSETAGPVYLTYIASN 669
>ref|NP_198375.1| unknown protein [Arabidopsis thaliana]
Length = 384
Score = 36.6 bits (83), Expect = 3.1
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 823 YWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
+WCE C ++ + + + D TGEA +F+ HA++I+G +A
Sbjct: 216 FWCEICNGFAKSVVAKFWLHLHIMDQTGEARCMLFDSHAKEILGTTA 262
>gb|ABA98395.1| hypothetical protein LOC_Os12g27380 [Oryza sativa (japonica
cultivar-group)]
Length = 609
Score = 36.2 bits (82), Expect = 4.0
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = -1
Query: 1564 SLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGREL-V 1391
+++ AN+ ++ V ND+ + ++ +EE + P + ++L ++ V V
Sbjct: 296 TVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPAITFSLTPFQEIPSLVDKNIFYV 355
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS----GKTVT 1271
DI+GV+ +S T +VR + + KR + + D S G T+T
Sbjct: 356 DIMGVITEISSTSTVRPRSRDADSLKRTLQICDASSLYTGLTIT 399
>gb|AAM37051.1| hemolysin-type calcium binding protein [Xanthomonas axonopodis pv.
citri str. 306]
ref|NP_642515.1| hemolysin-type calcium binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 1294
Score = 36.2 bits (82), Expect = 4.0
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = -1
Query: 1405 GRELV---DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTG 1235
GR+ V D +G +Q TL D ++ K D+ VAD G+ V ++++ND A+TTG
Sbjct: 550 GRDYVLDQDGLGAIQIDGKTLG-----DAKSAGKADVWVADLDGQRVGLAVYNDAASTTG 604
Query: 1234 QELL 1223
++L+
Sbjct: 605 KKLV 608
>gb|AAB85861.1| replication factor A related protein [Methanothermobacter
thermautotrophicus str. Delta H]
ref|NP_276500.1| replication factor A related protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 181
Score = 35.8 bits (81), Expect = 5.3
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -1
Query: 868 CTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVI--KLSDPTGEAWVSVFNEHAEKII 695
C +CN+++ C C + E RY+++I ++ D TGE ++ F AE I+
Sbjct: 67 CPSCNERLD--LSDENICNFCGELVDEP--RYLLMIPGRIMDDTGEVMITFFGREAESIL 122
Query: 694 GCSADELDRIRKEEGDDS 641
+ DE+ I + D+S
Sbjct: 123 EMTTDEVVNIINQSADES 140
>ref|XP_421389.1| PREDICTED: similar to kinesin light chain 1J; KLC1J [Gallus gallus]
Length = 814
Score = 35.8 bits (81), Expect = 5.3
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = -1
Query: 1300 VADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEI 1121
VA G T S W +L ++ L+ V + S VS Q +++G S+
Sbjct: 3 VAYGEGTRKTRSSWGELMIFWVRQKLEEEACHRVSCVDSSTVSHNQSPRAASVGPSSHPS 62
Query: 1120 NPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGG 1010
PD P+A + S G++ P + TRAGG
Sbjct: 63 PPDRPQAAMTAALRGSSGREGGRPPRTGSHDITRAGG 99
>ref|ZP_00883990.1| conserved hypothetical protein [Shewanella sp. MR-4]
gb|EAP44245.1| conserved hypothetical protein [Shewanella sp. MR-4]
Length = 191
Score = 35.8 bits (81), Expect = 5.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 735 ASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQA 872
+SP ++++T Y++EH S +H PKA++ LLQ V+A
Sbjct: 10 SSPFSDKAVMTAQYIAEHHPSLAFHQPQLPNTPKAAMALLLQYVEA 55
>gb|AAR19789.1| BSU1 Ser/Thr phosphatase [Arabidopsis thaliana]
sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 (Bri1 suppressor protein
1)
Length = 793
Score = 35.0 bits (79), Expect = 9.0
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Frame = +2
Query: 479 RDLFKQVLGLSCEVDRCFTP--HGDSLPLLVHVFMLCDADAEQVRNPGGFLELENVAVVP 652
+DL K+V+ + +TP + D + V LCD + N L+L+
Sbjct: 450 QDLHKKVISTLLR-PKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKV----- 503
Query: 653 LLFPDPIKLVG---AAANDLLRMLVEHGHPSLTSGIGEL------DHHDVSQRALRVILL 805
PIK+ G DL+R+ E+GHPS+ I + D+ D Q +L +I+L
Sbjct: 504 -----PIKVFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIML 558
Query: 806 APLAPVSRPKSFSHLL 853
+ PK+ HL+
Sbjct: 559 LFALKIEYPKNI-HLI 573
>ref|XP_759715.1| hypothetical protein UM03568.1 [Ustilago maydis 521]
gb|EAK84459.1| hypothetical protein UM03568.1 [Ustilago maydis 521]
Length = 1186
Score = 35.0 bits (79), Expect = 9.0
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 16/89 (17%)
Frame = -1
Query: 943 EKPVFFSLYAI----ISHIKPDQNMWYRACTTCN----------KKVTEAFGSGYWCEGC 806
E VF S AI S K + YR+C C V EA + C C
Sbjct: 2 ETEVFVSANAIPLTTSSSAKDSRRRQYRSCDRCRVGKRACNAEYDSVAEAINNKVACSNC 61
Query: 805 QKNDSECSLRYIMVI--KLSDPTGEAWVS 725
QK CS +Y++ I L + G+A V+
Sbjct: 62 QKKGKTCSFQYVLSILGGLPNTAGQAVVA 90
>gb|AAF86539.1| F21B7.7 [Arabidopsis thaliana]
Length = 846
Score = 35.0 bits (79), Expect = 9.0
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Frame = +2
Query: 479 RDLFKQVLGLSCEVDRCFTP--HGDSLPLLVHVFMLCDADAEQVRNPGGFLELENVAVVP 652
+DL K+V+ + +TP + D + V LCD + N L+L+
Sbjct: 503 QDLHKKVISTLLR-PKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKV----- 556
Query: 653 LLFPDPIKLVG---AAANDLLRMLVEHGHPSLTSGIGEL------DHHDVSQRALRVILL 805
PIK+ G DL+R+ E+GHPS+ I + D+ D Q +L +I+L
Sbjct: 557 -----PIKVFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIML 611
Query: 806 APLAPVSRPKSFSHLL 853
+ PK+ HL+
Sbjct: 612 LFALKIEYPKNI-HLI 626
>emb|CAE68440.1| Hypothetical protein CBG14225 [Caenorhabditis briggsae]
Length = 876
Score = 35.0 bits (79), Expect = 9.0
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = +3
Query: 993 EYMDLKPPARVAPTSALIGASEVSLPS--------ESYQDLRFLASGKSGLISRVLLPIV 1148
+Y PP ++ T +GA EV +PS S QD FL LL
Sbjct: 65 DYHKYTPPQNLSVTVPKMGAIEVQIPSWYGWNYAITSVQDDVFLTLMGFSTCPVTLLANN 124
Query: 1149 ERDTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATT 1304
+ + DTF + T G S + S P V++ ++Q E + VLP + TT
Sbjct: 125 YDISTGQGDTFMVLPTTWGSKS-FTFSLPPAVLSGTYQYEQILVLPTTEGTT 175
>ref|NP_171844.3| BSU1; hydrolase/ protein serine/threonine phosphatase [Arabidopsis
thaliana]
Length = 812
Score = 35.0 bits (79), Expect = 9.0
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Frame = +2
Query: 479 RDLFKQVLGLSCEVDRCFTP--HGDSLPLLVHVFMLCDADAEQVRNPGGFLELENVAVVP 652
+DL K+V+ + +TP + D + V LCD + N L+L+
Sbjct: 469 QDLHKKVISTLLR-PKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKV----- 522
Query: 653 LLFPDPIKLVG---AAANDLLRMLVEHGHPSLTSGIGEL------DHHDVSQRALRVILL 805
PIK+ G DL+R+ E+GHPS+ I + D+ D Q +L +I+L
Sbjct: 523 -----PIKVFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIML 577
Query: 806 APLAPVSRPKSFSHLL 853
+ PK+ HL+
Sbjct: 578 LFALKIEYPKNI-HLI 592
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,259,304,758
Number of Sequences: 3454138
Number of extensions: 70936526
Number of successful extensions: 206609
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 191514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205941
length of database: 1,185,965,366
effective HSP length: 135
effective length of database: 719,656,736
effective search space used: 286423380928
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)