BLASTX 2.2.6 [Apr-09-2003]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2192890.2.1
         (531 letters)

Database: nr 
           3,454,138 sequences; 1,185,965,366 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98999.1|  hypothetical protein LOC_Os12g38650 [Oryza s...    89   8e-17
ref|NP_196421.1|  unknown protein [Arabidopsis thaliana] >gi...    69   8e-11

>gb|ABA98999.1| hypothetical protein LOC_Os12g38650 [Oryza sativa (japonica
           cultivar-group)]
          Length = 54

 Score = 89.0 bits (219), Expect = 8e-17
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = +1

Query: 76  AASSAVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 231
           AA++AVEK+K LWDSQVNDEE WA NYKL+KA GLF  SIF+MRNFGDLMAI
Sbjct: 3   AAAAAVEKVKALWDSQVNDEEAWAFNYKLMKAGGLFVASIFVMRNFGDLMAI 54



>ref|NP_196421.1| unknown protein [Arabidopsis thaliana]
 gb|AAR92288.1| At5g08040 [Arabidopsis thaliana]
 emb|CAB62616.1| putative protein [Arabidopsis thaliana]
 gb|AAR24145.1| At5g08040 [Arabidopsis thaliana]
 sp|Q9SD80|TOM5_ARATH Mitochondrial import receptor subunit TOM5 homolog (Translocase of
           outer membrane 5 kDa subunit homolog)
          Length = 54

 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 27/48 (56%), Positives = 41/48 (85%)
 Frame = +1

Query: 88  AVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 231
           ++EK+K LW S+V+DE++WA+N KLL+A G+FAG + LMR++GDLM +
Sbjct: 7   SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54



  Database: nr
    Posted date:  Apr 6, 2006  2:41 PM
  Number of letters in database: 1,185,965,366
  Number of sequences in database:  3,454,138
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 972,548,702
Number of Sequences: 3454138
Number of extensions: 16655499
Number of successful extensions: 35883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 35292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35881
length of database: 1,185,965,366
effective HSP length: 121
effective length of database: 768,014,668
effective search space used: 42240806740
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)