BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716352.2.1
(990 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_914833.1| putative glycine-rich RNA-binding protein ... 179 2e-43
gb|ABA40461.1| RNA binding protein-like protein [Solanum tu... 145 2e-33
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] 144 5e-33
emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana] 143 9e-33
ref|NP_849377.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2... 143 9e-33
ref|NP_193121.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2... 143 9e-33
dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris] 140 6e-32
gb|AAM63053.1| glycine-rich RNA binding protein, putative [... 138 3e-31
ref|NP_850629.1| RNA binding / nucleic acid binding [Arabid... 138 3e-31
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pis... 131 4e-29
emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidops... 131 4e-29
gb|ABA98638.1| RNA-binding protein precursor [Oryza sativa ... 129 2e-28
ref|NP_200911.1| RNA binding / nucleic acid binding [Arabid... 119 2e-25
dbj|BAA05170.1| RNA-binding glycine rich protein (RGP-2) [N... 117 9e-25
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tab... 115 2e-24
dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomit... 114 6e-24
gb|AAL07519.1| RNA-binding protein precursor [Solanum tuber... 113 1e-23
gb|AAM01112.1| Putative RNA-binding protein [Oryza sativa] 105 2e-21
dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thal... 104 6e-21
emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclea... 103 8e-21
ref|NP_568681.1| RPS19; RNA binding [Arabidopsis thaliana] ... 103 8e-21
emb|CAA05728.1| OsGRP1 [Oryza sativa (japonica cultivar-gro... 102 3e-20
gb|ABA99935.1| glycine-rich RNA-binding protein, putative [... 102 3e-20
dbj|BAA06521.1| cp31 [Arabidopsis thaliana] 101 4e-20
gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] >... 101 4e-20
ref|NP_194208.1| RBP31 (31-KDA RNA BINDING PROTEIN); RNA bi... 101 4e-20
emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana] 101 4e-20
gb|AAA18380.1| RNA-binding protein 3 101 4e-20
gb|AAA18379.1| RNA-binding protein 2 101 4e-20
dbj|BAA06520.1| cp31 [Arabidopsis thaliana] 101 4e-20
gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca] 101 5e-20
gb|AAB65412.1| glycine-rich protein [Oryza sativa] 101 5e-20
dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomit... 100 7e-20
emb|CAC83314.1| glycine rich RNA binding protein [Oryza sat... 100 7e-20
ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella... 100 9e-20
ref|NP_177563.1| RNA binding / nucleic acid binding [Arabid... 100 1e-19
emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvest... 100 2e-19
gb|ABB97027.1| unknown [Brassica rapa] 99 2e-19
dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae] 99 2e-19
gb|AAA75104.1| single-stranded nucleic acid binding protein... 99 2e-19
gb|AAA33486.1| nucleic acid-binding protein 99 2e-19
gb|AAB66885.1| glycine-rich protein [Oryza sativa] 99 3e-19
emb|CAA88558.1| glycine rich protein, RNA binding protein [... 99 3e-19
emb|CAA41152.1| glycine-rich protein [Daucus carota] >gi|54... 99 3e-19
gb|AAT85299.1| glycine-rich RNA-binding protein, putative [... 99 3e-19
gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa] 99 3e-19
emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbagin... 98 4e-19
emb|CAD18921.1| RNA-binding protein precursor [Persea ameri... 98 4e-19
emb|CAA73034.1| SGRP-1 [Solanum commersonii] 98 4e-19
ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago m... 98 4e-19
gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays] ... 98 6e-19
gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAB07749.1| low temperature-responsive RNA-binding protein 98 6e-19
gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays] 98 6e-19
gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays] ... 98 6e-19
emb|CAD29693.1| putative glycine rich protein [Rumex obtusi... 98 6e-19
gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays] ... 98 6e-19
gb|ABB87126.1| putative glycine-rich RNA binding protein-li... 97 8e-19
emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea] 97 8e-19
pir||S15348 RNA-binding protein, 28K - spinach 97 8e-19
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast ... 97 8e-19
emb|CAA78513.1| glycine-rich RNA binding protein [Brassica ... 97 8e-19
gb|AAF31402.1| putative glycine-rich RNA binding protein 1 ... 97 1e-18
gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays] 97 1e-18
dbj|BAA03741.1| RNA-binding glycine-rich protein-1 (RGP-1a)... 97 1e-18
gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max] 97 1e-18
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A... 97 1e-18
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis th... 96 2e-18
ref|NP_181259.1| RNA binding / nucleic acid binding [Arabid... 96 2e-18
emb|CAA31077.1| ABA-inducible gene protein [Zea mays] >gi|1... 96 2e-18
gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 ... 96 2e-18
emb|CAD18922.1| RNA-binding protein precursor [Persea ameri... 96 2e-18
gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargon... 96 2e-18
dbj|BAD46651.1| putative nucleic acid-binding protein [Oryz... 96 2e-18
ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa] ... 96 2e-18
emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum b... 96 2e-18
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A... 96 2e-18
gb|AAF31403.1| putative glycine-rich RNA binding protein 3 ... 96 3e-18
gb|AAL13082.1| putative glycine-rich RNA-binding protein [P... 96 3e-18
ref|NP_187457.1| RNA binding / nucleic acid binding [Arabid... 96 3e-18
gb|AAA33039.1| RNA-binding protein 96 3e-18
ref|NP_850017.1| ATGRP7; RNA binding [Arabidopsis thaliana] 96 3e-18
ref|NP_179760.1| ATGRP7; RNA binding [Arabidopsis thaliana]... 96 3e-18
gb|AAB66884.1| glycine-rich protein [Oryza sativa] 96 3e-18
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus c... 96 3e-18
dbj|BAA03743.1| RNA-binding gricine-rich protein-1 (RGP-1c)... 96 3e-18
gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidop... 96 3e-18
gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays] ... 95 4e-18
gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bi... 95 4e-18
gb|AAW44674.1| glycine-rich RNA binding protein, putative [... 95 4e-18
gb|AAW44675.1| glycine-rich RNA binding protein, putative [... 95 4e-18
gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays] 95 4e-18
gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays] 95 4e-18
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus un... 95 5e-18
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa] 95 5e-18
ref|XP_483744.1| nucleic acid-binding protein-like [Oryza s... 94 6e-18
ref|NP_849524.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 94 6e-18
ref|NP_849523.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 94 6e-18
ref|XP_483743.1| putative nucleic acid-binding protein [Ory... 94 6e-18
ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella... 94 6e-18
emb|CAA37880.1| unnamed protein product [Nicotiana sylvestr... 94 6e-18
ref|NP_195637.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 94 6e-18
dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomit... 94 8e-18
gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays] 94 8e-18
gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays] 94 8e-18
ref|NP_917982.1| putative 29 kDa ribonucleoprotein A, chlor... 94 8e-18
gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexica... 94 1e-17
emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotia... 94 1e-17
dbj|BAA22411.1| Ps16 protein [Triticum aestivum] 94 1e-17
emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vul... 94 1e-17
ref|NP_190914.1| CP29; RNA binding [Arabidopsis thaliana] >... 93 1e-17
dbj|BAA06519.1| cp29 [Arabidopsis thaliana] 93 1e-17
ref|NP_850692.1| CP29; RNA binding [Arabidopsis thaliana] >... 93 1e-17
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia ... 93 2e-17
gb|AAF06329.1| glycine-rich RNA binding protein [Medicago s... 93 2e-17
gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays] 92 2e-17
ref|NP_199836.1| RNA binding / nucleic acid binding [Arabid... 92 2e-17
ref|XP_754757.1| hypothetical protein Afu3g08580 [Aspergill... 92 2e-17
dbj|BAA03742.1| RNA-binding glycine-rich protein-1 (RGP-1b)... 92 2e-17
emb|CAA74889.1| ribonucleoprotein [Pisum sativum] >gi|10179... 92 4e-17
emb|CAA43431.1| glycine-rich protein [Zea mays] 92 4e-17
gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar] 91 5e-17
ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus... 91 7e-17
ref|XP_868602.1| PREDICTED: similar to cold inducible RNA b... 91 7e-17
emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] 91 7e-17
gb|AAH54250.1| Xcirp2 protein [Xenopus laevis] >gi|11761319... 91 7e-17
gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia ... 91 9e-17
ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumiga... 91 9e-17
gb|AAH06580.1| Rbm3 protein [Mus musculus] >gi|74228699|dbj... 90 1e-16
gb|AAH86491.1| Rbm3 protein [Mus musculus] 90 1e-16
gb|AAH59098.1| Rbm3 protein [Mus musculus] >gi|26352956|dbj... 90 1e-16
gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus] 90 2e-16
ref|XP_343774.2| PREDICTED: RNA binding motif (RNP1, RRM) p... 90 2e-16
ref|XP_863171.1| PREDICTED: similar to RNA binding motif pr... 90 2e-16
emb|CAA89058.1| putative glycine rich RNA binding protein [... 90 2e-16
ref|XP_868600.1| PREDICTED: similar to cold inducible RNA b... 89 2e-16
gb|AAI02774.1| Hypothetical protein LOC507120 [Bos taurus] ... 89 2e-16
gb|AAP36943.1| Homo sapiens cold inducible RNA binding prot... 89 2e-16
pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18... 89 2e-16
ref|NP_001271.1| cold inducible RNA binding protein [Homo s... 89 2e-16
gb|AAZ38826.1| aggrecan promoter binding protein [Gallus ga... 89 2e-16
ref|XP_533961.1| PREDICTED: similar to cold inducible RNA b... 89 2e-16
ref|NP_001026518.1| cold inducible RNA binding protein [Gal... 89 2e-16
ref|XP_868601.1| PREDICTED: similar to cold inducible RNA b... 89 2e-16
gb|AAH69219.1| Cold inducible RNA binding protein [Rattus n... 89 3e-16
gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetul... 89 3e-16
ref|ZP_00592006.1| RNA-binding region RNP-1 (RNA recogniti... 89 4e-16
gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis] 88 5e-16
gb|AAG09816.1| cold-inducible RNA binding protein XCIRP-1 [... 88 5e-16
dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hy... 88 5e-16
sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein (G... 88 5e-16
ref|NP_006734.1| RNA binding motif protein 3 isoform a [Hom... 88 5e-16
dbj|BAB92955.1| cold inducible RNA-binding protein alpha [H... 88 5e-16
gb|AAK01176.1| RNA-binding protein [Triticum aestivum] 88 5e-16
ref|NP_956311.1| cold inducible RNA binding protein [Danio ... 88 6e-16
dbj|BAA88978.1| BFCIRP [Rana catesbeiana] 87 8e-16
gb|AAB04133.1| cutinase negative acting protein 87 8e-16
dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae] 87 8e-16
emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvest... 87 8e-16
emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbagin... 87 8e-16
ref|XP_965121.1| hypothetical protein [Neurospora crassa N1... 87 8e-16
ref|NP_001017228.1| hypothetical protein LOC549982 [Xenopus... 87 8e-16
ref|ZP_00766004.1| RNA-binding region RNP-1 (RNA recogniti... 86 2e-15
gb|AAA79045.1| 24 kDa RNA binding protein 86 2e-15
ref|NP_920649.1| putative RNA-binding protein [Oryza sativa... 86 2e-15
gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium ... 86 3e-15
ref|XP_896365.1| PREDICTED: similar to Putative RNA-binding... 85 4e-15
gb|AAO90692.1| nucleic acid binding domain protein [Coxiell... 85 4e-15
ref|ZP_01150371.1| RNA-binding region RNP-1 (RNA recogniti... 85 4e-15
gb|AAL39067.1| single-stranded DNA binding protein precurso... 85 5e-15
dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae] 85 5e-15
emb|CAH25380.1| putative glycine-rich RNA-binding protein [... 85 5e-15
ref|XP_657084.1| RNA-binding protein [Entamoeba histolytica... 84 7e-15
ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis... 84 7e-15
ref|ZP_00769324.1| RNA-binding region RNP-1 (RNA recogniti... 84 7e-15
emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae] >gi|1045265... 84 7e-15
gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevi... 84 7e-15
ref|NP_001017797.1| hypothetical protein LOC550495 [Danio r... 84 7e-15
gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium ... 84 9e-15
emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica... 84 1e-14
ref|XP_485004.1| PREDICTED: similar to Putative RNA-binding... 84 1e-14
ref|NP_189273.1| ARRZ-1A; RNA binding / nucleotide binding ... 84 1e-14
gb|AAM62588.1| glycine-rich RNA-binding protein, putative [... 84 1e-14
gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] >... 84 1e-14
ref|NP_173298.1| RNA binding / nucleic acid binding [Arabid... 84 1e-14
emb|CAB86413.1| gar2 [Schizosaccharomyces pombe] >gi|191144... 83 1e-14
gb|ABC18895.1| RNA-binding region RNP-1 [Moorella thermoace... 83 1e-14
dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobac... 83 1e-14
gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition m... 83 1e-14
ref|ZP_00532200.1| RNA-binding region RNP-1 (RNA recogniti... 83 1e-14
ref|XP_468382.1| putative RNA-binding protein RNP1 precurso... 83 1e-14
ref|NP_179221.1| RNA binding / nucleic acid binding [Arabid... 83 1e-14
ref|XP_719050.1| putative nuclear localization sequence bin... 83 1e-14
ref|NP_193122.2| RNA binding / nucleic acid binding [Arabid... 83 2e-14
ref|XP_470338.1| putative RNA binding protein [Oryza sativa... 83 2e-14
ref|XP_452713.1| unnamed protein product [Kluyveromyces lac... 82 3e-14
ref|NP_196239.1| RNA binding / nucleic acid binding [Arabid... 82 3e-14
gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus ... 82 3e-14
emb|CAA88179.1| gar2 [Schizosaccharomyces pombe] 82 3e-14
gb|AAW41016.1| single-stranded DNA binding protein, putativ... 82 3e-14
ref|XP_478915.1| putative heterogeneous nuclear ribonucleop... 82 3e-14
emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriov... 82 3e-14
ref|ZP_00661830.1| RNA-binding region RNP-1 (RNA recogniti... 82 3e-14
emb|CAG58749.1| unnamed protein product [Candida glabrata C... 82 3e-14
ref|ZP_00243386.1| COG0724: RNA-binding proteins (RRM domai... 82 4e-14
gb|AAB61213.1| glycine-rich protein [Oryza sativa] 82 4e-14
ref|XP_476928.1| glycine-rich RNA-binding protein-like [Ory... 82 4e-14
gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatu... 81 6e-14
gb|AAX07503.1| unknown [Gemmata sp. Wa1-1] 81 6e-14
ref|XP_549003.1| PREDICTED: similar to RNA binding motif pr... 81 6e-14
ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis... 81 6e-14
ref|ZP_00512687.1| RNA-binding region RNP-1 (RNA recogniti... 81 6e-14
ref|XP_855044.1| PREDICTED: similar to RNA binding motif pr... 81 6e-14
ref|ZP_00527889.1| RNA-binding region RNP-1 (RNA recogniti... 81 7e-14
ref|XP_915256.1| PREDICTED: similar to Putative RNA-binding... 81 7e-14
emb|CAG84877.1| unnamed protein product [Debaryomyces hanse... 81 7e-14
emb|CAC86462.1| glycin-rich RNA binding protein [Polytomell... 81 7e-14
ref|NP_910645.1| RNA recognition motif (RRM)-containing pro... 81 7e-14
gb|AAX07506.1| unknown [Gemmata sp. Wa1-1] 80 1e-13
gb|AAH57481.1| Cirbp protein [Danio rerio] 80 1e-13
gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition m... 80 1e-13
ref|YP_431499.1| RNA-binding protein (RRM domain) [Hahella ... 80 1e-13
ref|XP_385593.1| conserved hypothetical protein [Gibberella... 80 1e-13
ref|ZP_00533321.1| RNA-binding region RNP-1 (RNA recogniti... 80 1e-13
ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus... 80 1e-13
ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recogniti... 80 1e-13
ref|ZP_00310979.1| COG0724: RNA-binding proteins (RRM domai... 80 2e-13
gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] 80 2e-13
ref|ZP_00522665.1| RNA-binding region RNP-1 (RNA recogniti... 80 2e-13
ref|ZP_01073434.1| RNA-binding protein [Campylobacter fetus... 80 2e-13
ref|XP_962723.1| hypothetical protein [Neurospora crassa N1... 80 2e-13
dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvest... 80 2e-13
gb|ABB37594.1| RNA-binding region RNP-1 [Desulfovibrio desu... 79 2e-13
ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago m... 79 2e-13
gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895] >gi|45... 79 3e-13
emb|CAH08430.1| putative RNA-binding protein [Bacteroides f... 79 3e-13
gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]... 79 3e-13
ref|NP_181287.1| RNA binding / nucleic acid binding [Arabid... 79 3e-13
gb|ABB37976.1| RNA-binding region RNP-1 [Desulfovibrio desu... 79 4e-13
gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium ... 79 4e-13
emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum b... 79 4e-13
emb|CAG60192.1| unnamed protein product [Candida glabrata C... 79 4e-13
gb|AAH76956.1| MGC89376 protein [Xenopus tropicalis] >gi|52... 78 5e-13
ref|NP_849832.1| RNA binding / nucleic acid binding [Arabid... 78 5e-13
gb|ABB14351.1| RNA-binding protein [Carboxydothermus hydrog... 78 5e-13
ref|ZP_01090592.1| RNA-binding protein [Blastopirellula mar... 78 5e-13
gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium ... 78 5e-13
ref|XP_476683.1| putative RNA-binding protein [Oryza sativa... 78 5e-13
ref|NP_176208.1| RNA binding / nucleic acid binding [Arabid... 78 5e-13
dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae] 78 6e-13
ref|XP_469309.1| putative RNA-binding protein [Oryza sativa... 78 6e-13
gb|AAY51685.1| RNA-binding protein [Chlorobium tepidum TLS] 77 8e-13
gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition m... 77 8e-13
ref|ZP_00661617.1| RNA-binding region RNP-1 (RNA recogniti... 77 8e-13
emb|CAE47924.1| oligouridylate binding protein, putative [A... 77 8e-13
ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA... 77 8e-13
emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare] 77 8e-13
gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris ... 77 1e-12
emb|CAF23617.1| probable nucleic acid-binding protein [Para... 77 1e-12
dbj|BAD39994.1| glycine-rich RNA-binding protein [Symbiobac... 77 1e-12
emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio ... 77 1e-12
ref|ZP_00590701.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
emb|CAF96554.1| unnamed protein product [Tetraodon nigrovir... 77 1e-12
ref|XP_623982.1| PREDICTED: similar to ENSANGP00000015329 [... 77 1e-12
ref|XP_612948.2| PREDICTED: similar to RNA-binding region c... 77 1e-12
gb|AAH80020.1| EPAB protein [Xenopus laevis] 77 1e-12
gb|AAK29408.1| embryonic poly(A) binding protein [Xenopus l... 77 1e-12
ref|ZP_01019076.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
ref|ZP_00502429.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
ref|NP_904912.1| RNA-binding protein [Porphyromonas gingiva... 77 1e-12
gb|AAC65342.1| RNA-binding protein, putative [Treponema pal... 77 1e-12
ref|ZP_00512344.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
emb|CAE71715.1| Hypothetical protein CBG18692 [Caenorhabdit... 77 1e-12
ref|XP_345478.2| PREDICTED: hypothetical protein XP_345477 ... 77 1e-12
ref|ZP_00509395.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
gb|EAQ20775.1| RNA-binding region RNP-1 (RNA recognition m... 77 1e-12
ref|ZP_01021329.1| RNA-binding region RNP-1 (RNA recogniti... 77 1e-12
ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus... 77 1e-12
ref|XP_380618.1| hypothetical protein FG00442.1 [Gibberella... 77 1e-12
pdb|2CQD|A Chain A, Solution Structure Of The Rna Recogniti... 76 2e-12
dbj|BAE38891.1| unnamed protein product [Mus musculus] 76 2e-12
gb|AAI14277.1| Unknown (protein for MGC:136803) [Danio reri... 76 2e-12
gb|AAH81649.1| Rnpc1 protein [Danio rerio] 76 2e-12
dbj|BAD87838.1| hypothetical protein [Oryza sativa (japonic... 76 2e-12
gb|EAQ20895.1| RNA-binding region RNP-1 (RNA recognition m... 76 2e-12
emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus ... 76 2e-12
gb|AAH85307.1| Seb4 [Mus musculus] >gi|74222042|dbj|BAE2684... 76 2e-12
ref|NP_919356.1| RNA-binding region containing protein 1 [D... 76 2e-12
ref|XP_686641.1| PREDICTED: similar to RNA binding protein ... 76 2e-12
gb|AAV59339.1| unknown protein [Oryza sativa (japonica cult... 76 2e-12
ref|NP_190188.1| RNA binding / nucleic acid binding [Arabid... 76 2e-12
ref|ZP_00532230.1| RNA-binding region RNP-1 (RNA recogniti... 76 2e-12
ref|NP_564168.1| RNA binding / nucleic acid binding [Arabid... 76 2e-12
ref|XP_472268.1| OSJNBa0044M19.2 [Oryza sativa (japonica cu... 76 2e-12
gb|AAH75431.1| RNA-binding region (RNP1, RRM) containing 1 ... 76 2e-12
ref|XP_472414.1| OJ000126_13.13 [Oryza sativa (japonica cul... 76 2e-12
gb|AAF87259.1| Contains similarity to seb4D protein from Mu... 76 2e-12
emb|CAA53065.1| SEB4 [Mus musculus] >gi|28201881|sp|Q62176|... 76 2e-12
emb|CAC36889.1| OTTHUMP00000016066 [Homo sapiens] 76 2e-12
gb|AAS55633.1| unknown [Homo sapiens] 76 2e-12
dbj|BAC04474.1| unnamed protein product [Homo sapiens] 76 2e-12
gb|AAK92717.1| putative RNA-binding protein [Arabidopsis th... 75 3e-12
ref|NP_566321.1| RNA binding / nucleic acid binding [Arabid... 75 3e-12
pir||S38382 SEB4D protein - human (fragment) 75 3e-12
gb|AAF21191.1| putative RNA-binding protein [Arabidopsis th... 75 3e-12
dbj|BAC90471.1| RNA-binding protein [Gloeobacter violaceus ... 75 3e-12
emb|CAC32281.1| RNPC1 [Homo sapiens] 75 3e-12
ref|NP_906270.1| RNA-binding region containing protein 1 is... 75 3e-12
ref|NP_495120.1| C18A3.5b [Caenorhabditis elegans] >gi|1457... 75 3e-12
emb|CAC21462.1| RNPC1 [Homo sapiens] >gi|17511712|gb|AAH187... 75 3e-12
ref|NP_059965.2| RNA-binding region containing protein 1 is... 75 3e-12
emb|CAA53064.1| SEB4B [Homo sapiens] 75 3e-12
ref|NP_850539.1| RNA binding / nucleic acid binding [Arabid... 75 3e-12
emb|CAA53063.1| SEB4D [Homo sapiens] 75 3e-12
pir||S38383 SEB4B protein - human (fragment) 75 3e-12
ref|XP_963862.1| hypothetical protein [Neurospora crassa N1... 75 4e-12
emb|CAF99380.1| unnamed protein product [Tetraodon nigrovir... 75 4e-12
gb|AAY25469.1| At2g46780 [Arabidopsis thaliana] 75 4e-12
ref|NP_495121.1| C18A3.5a [Caenorhabditis elegans] >gi|1457... 75 4e-12
ref|NP_182201.1| RNA binding / nucleic acid binding [Arabid... 75 4e-12
dbj|BAD40750.1| glycine-rich RNA-binding protein [Symbiobac... 75 4e-12
ref|XP_863236.1| PREDICTED: similar to RNA binding motif pr... 75 4e-12
ref|XP_700480.1| PREDICTED: similar to RNA binding motif pr... 75 4e-12
ref|NP_495123.2| C18A3.5e [Caenorhabditis elegans] >gi|2463... 75 4e-12
gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana] 75 4e-12
pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis e... 75 4e-12
ref|NP_851195.1| RNA binding / nucleic acid binding [Arabid... 75 4e-12
ref|NP_871980.1| C18A3.5f [Caenorhabditis elegans] >gi|2463... 75 4e-12
ref|NP_998030.1| RNA binding motif protein 24 [Danio rerio]... 75 4e-12
ref|NP_974937.1| RNA binding / nucleic acid binding [Arabid... 75 4e-12
ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella... 75 4e-12
dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thali... 75 4e-12
emb|CAE59176.1| Hypothetical protein CBG02484 [Caenorhabdit... 75 5e-12
ref|XP_417367.1| PREDICTED: similar to embryonic poly(A) bi... 75 5e-12
ref|NP_915014.1| P0698A10.29 [Oryza sativa (japonica cultiv... 75 5e-12
emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba v... 75 5e-12
ref|NP_849525.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 75 5e-12
ref|YP_431779.1| RNA-binding protein (RRM domain) [Hahella ... 75 5e-12
dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryz... 75 5e-12
ref|NP_974169.1| RNA binding / nucleic acid binding [Arabid... 75 5e-12
ref|XP_214446.2| PREDICTED: similar to Autosomal Highly Con... 75 5e-12
ref|NP_565175.1| RNA binding / nucleic acid binding [Arabid... 75 5e-12
gb|AAF71806.1| F3F9.20 [Arabidopsis thaliana] 75 5e-12
gb|AAK43947.1| unknown protein [Arabidopsis thaliana] 75 5e-12
ref|NP_199943.1| nucleic acid binding [Arabidopsis thaliana... 75 5e-12
ref|XP_354752.3| PREDICTED: similar to RNA binding motif pr... 75 5e-12
emb|CAE63445.1| Hypothetical protein CBG07904 [Caenorhabdit... 75 5e-12
gb|AAG51218.1| RNA-binding protein; 68390-68829 [Arabidopsi... 74 7e-12
ref|NP_973958.1| RNA binding / nucleic acid binding [Arabid... 74 7e-12
ref|NP_174613.2| RNA binding / nucleic acid binding [Arabid... 74 7e-12
dbj|BAA06523.1| cp33 [Arabidopsis thaliana] 74 9e-12
emb|CAG31969.1| hypothetical protein [Gallus gallus] 74 9e-12
emb|CAB96420.1| hypothetical protein [Xenopus laevis] >gi|2... 74 9e-12
gb|AAH71118.1| MGC81363 protein [Xenopus laevis] 74 9e-12
gb|AAA02808.1| RNA-binding protein 74 9e-12
gb|AAH61322.1| RNA-binding region (RNP1, RRM) containing 1 ... 74 9e-12
emb|CAB78428.1| RNA-binding protein like [Arabidopsis thali... 74 9e-12
ref|NP_001029535.1| hypothetical protein LOC509771 [Bos tau... 74 9e-12
emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana] >... 74 9e-12
ref|NP_190806.1| CP33; RNA binding [Arabidopsis thaliana] >... 74 9e-12
dbj|BAD35670.1| putative SEB4D [Oryza sativa (japonica cult... 74 9e-12
ref|NP_001031725.1| RNA binding / nucleic acid binding [Ara... 74 9e-12
emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae] >gi|6324312... 74 9e-12
emb|CAG31140.1| hypothetical protein [Gallus gallus] >gi|61... 74 9e-12
gb|AAC37364.1| poly(A)-binding protein >gi|295646|gb|AAC373... 74 9e-12
gb|AAH72812.1| Seb4-A-prov protein [Xenopus laevis] 74 9e-12
ref|NP_567753.1| RNA binding / nucleic acid binding [Arabid... 74 9e-12
gb|AAS95735.1| RNA-binding protein [Desulfovibrio vulgaris ... 74 1e-11
ref|ZP_00525966.1| RNA-binding region RNP-1 (RNA recogniti... 74 1e-11
gb|AAS51760.1| ADL160Wp [Ashbya gossypii ATCC 10895] >gi|45... 74 1e-11
gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabido... 74 1e-11
emb|CAB60356.1| Hypothetical protein Y46G5A.13 [Caenorhabdi... 74 1e-11
gb|AAH72792.1| LOC398603 protein [Xenopus laevis] 74 1e-11
gb|AAP42281.1| RRM-type RNA-binding protein XSEB4R [Xenopus... 74 1e-11
gb|AAV59341.1| unknown protein [Oryza sativa (japonica cult... 73 2e-11
ref|NP_001017430.1| RNA binding motif protein 3 isoform b [... 73 2e-11
gb|AAS96903.1| RNA-binding protein [Desulfovibrio vulgaris ... 73 2e-11
dbj|BAD40256.1| glycine-rich RNA-binding protein [Symbiobac... 73 2e-11
emb|CAE71707.1| Hypothetical protein CBG18684 [Caenorhabdit... 73 2e-11
gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related p... 73 2e-11
gb|AAG51948.1| putative RNA-binding protein; 24808-23340 [A... 73 2e-11
ref|NP_565132.2| RNA binding / nucleic acid binding [Arabid... 73 2e-11
ref|NP_651609.1| CG12870-PA [Drosophila melanogaster] >gi|2... 73 2e-11
gb|AAF13099.1| putative RNA-binding protein, 3' partial [Ar... 73 2e-11
dbj|BAD42153.1| glycine-rich RNA-binding protein [Symbiobac... 73 2e-11
ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recogniti... 73 2e-11
gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oc... 73 2e-11
gb|AAQ94565.1| RNA binding motif protein [Danio rerio] 73 2e-11
ref|NP_196048.1| RNA binding / nucleic acid binding [Arabid... 73 2e-11
ref|XP_480007.1| putative RNA recognition motif (RRM)-conta... 73 2e-11
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicoti... 73 2e-11
dbj|BAC87434.1| unnamed protein product [Homo sapiens] 73 2e-11
ref|XP_757329.1| hypothetical protein UM01182.1 [Ustilago m... 73 2e-11
gb|EAA00247.2| ENSANGP00000015329 [Anopheles gambiae str. P... 72 3e-11
ref|NP_175810.1| mRNA 3'-UTR binding [Arabidopsis thaliana]... 72 3e-11
gb|AAC04442.1| Suppressor protein 12 [Caenorhabditis elegan... 72 3e-11
ref|NP_200269.1| RNA binding / nucleic acid binding [Arabid... 72 3e-11
gb|AAH49509.1| RNA binding motif protein, X-linked [Danio r... 72 3e-11
ref|XP_505375.1| hypothetical protein [Yarrowia lipolytica]... 72 3e-11
ref|NP_917667.1| P0410E01.24 [Oryza sativa (japonica cultiv... 72 3e-11
emb|CAG11982.1| unnamed protein product [Tetraodon nigrovir... 72 3e-11
gb|AAD30604.1| Unknown protein [Arabidopsis thaliana] 72 3e-11
gb|ABA94921.1| RNA recognition motif. (a.k.a. RRM, RBD, or ... 72 3e-11
gb|AAK30205.1| poly(A)-binding protein [Daucus carota] 72 3e-11
emb|CAB03236.1| Hypothetical protein R09B3.2 [Caenorhabditi... 72 3e-11
gb|AAO76994.1| putative RNA-binding protein rbpA [Bacteroid... 72 3e-11
gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or ... 72 3e-11
ref|NP_568685.1| RNA binding / nucleic acid binding [Arabid... 72 3e-11
gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana] 72 3e-11
gb|AAN28829.1| At1g20880/F9H16_14 [Arabidopsis thaliana] 72 3e-11
gb|AAK73977.1| At1g20880/F9H16_14 [Arabidopsis thaliana] 72 3e-11
ref|NP_564127.1| RNA binding / nucleic acid binding [Arabid... 72 3e-11
dbj|BAD61233.1| heterogeneous nuclear ribonucleoprotein A2/... 72 3e-11
ref|XP_624668.1| PREDICTED: similar to ENSANGP00000019306 [... 72 3e-11
dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thali... 72 3e-11
ref|XP_865070.1| PREDICTED: similar to RNA-binding region (... 72 4e-11
ref|XP_865185.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_865304.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis] 72 4e-11
gb|AAH86645.1| Rnpc2 protein [Mus musculus] >gi|74151058|db... 72 4e-11
ref|XP_873382.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
gb|AAL32373.1| transcription coactivator CAPER [Mus musculu... 72 4e-11
gb|AAH04000.1| Rnpc2 protein [Mus musculus] 72 4e-11
gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or ... 72 4e-11
ref|ZP_00673743.1| RNA-binding region RNP-1 (RNA recogniti... 72 4e-11
ref|ZP_00591248.1| RNA-binding region RNP-1 (RNA recogniti... 72 4e-11
gb|AAH75146.1| MGC81970 protein [Xenopus laevis] 72 4e-11
ref|XP_886666.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_886555.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_865289.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
gb|AAH66672.1| Hypothetical protein LOC323529 [Danio rerio]... 72 4e-11
gb|AAH93451.1| RNA-binding region (RNP1, RRM) containing 2 ... 72 4e-11
ref|XP_865167.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
dbj|BAE32977.1| unnamed protein product [Mus musculus] >gi|... 72 4e-11
ref|XP_886717.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_865220.1| PREDICTED: similar to RNA-binding region (... 72 4e-11
ref|XP_886645.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
emb|CAH18281.2| hypothetical protein [Homo sapiens] 72 4e-11
ref|XP_865090.1| PREDICTED: similar to RNA-binding region (... 72 4e-11
emb|CAE45890.1| hypothetical protein [Homo sapiens] 72 4e-11
emb|CAD97833.1| hypothetical protein [Homo sapiens] 72 4e-11
ref|XP_865145.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_514612.1| PREDICTED: similar to Rnpc2 protein [Pan t... 72 4e-11
dbj|BAE22477.1| unnamed protein product [Mus musculus] 72 4e-11
ref|NP_921939.1| putative RNA-binding protein [Oryza sativa... 72 4e-11
gb|AAI05542.1| Unknown (protein for IMAGE:8120827) [Bos tau... 72 4e-11
ref|XP_886657.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_585544.2| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_865202.1| PREDICTED: similar to RNA-binding region (... 72 4e-11
gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium ... 72 4e-11
ref|XP_425690.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_886631.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_886619.1| PREDICTED: similar to RNA-binding region c... 72 4e-11
ref|XP_709359.1| PREDICTED: similar to heterogeneous nuclea... 71 6e-11
gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica ole... 71 6e-11
gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabili... 71 6e-11
dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120] >... 71 6e-11
ref|XP_863190.1| PREDICTED: similar to RNA binding motif pr... 71 6e-11
ref|XP_709358.1| PREDICTED: similar to heterogeneous nuclea... 71 6e-11
ref|NP_723243.1| CG11266-PA, isoform A [Drosophila melanoga... 71 6e-11
emb|CAH25374.1| putative 29 kDa ribonucleoprotein A [Guilla... 71 6e-11
gb|AAM65229.1| oligouridylate binding protein, putative [Ar... 71 6e-11
ref|NP_188026.1| mRNA 3'-UTR binding [Arabidopsis thaliana]... 71 6e-11
gb|AAD00327.1| RBM1 [Macropus eugenii] 71 6e-11
ref|NP_723248.1| CG11266-PG, isoform G [Drosophila melanoga... 71 6e-11
gb|AAH87677.1| Unknown (protein for MGC:105811) [Rattus nor... 71 6e-11
ref|XP_689957.1| PREDICTED: similar to heterogeneous nuclea... 71 6e-11
ref|XP_512236.1| PREDICTED: similar to DAZ associated prote... 71 6e-11
dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona i... 71 8e-11
ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus... 71 8e-11
dbj|BAD46650.1| putative nucleic acid-binding protein [Oryz... 71 8e-11
emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]... 71 8e-11
ref|NP_001027768.1| glycine rich RNA binding protein [Ciona... 71 8e-11
gb|AAH44487.1| RNA-binding region (RNP1, RRM) containing 2 ... 71 8e-11
emb|CAG09825.1| unnamed protein product [Tetraodon nigrovir... 71 8e-11
dbj|BAD37252.1| putative RRM-containing protein [Oryza sati... 71 8e-11
ref|NP_180899.1| RNA binding / nucleic acid binding [Arabid... 71 8e-11
ref|ZP_00694628.1| RNA-binding region RNP-1 (RNA recogniti... 71 8e-11
ref|XP_521047.1| PREDICTED: similar to Putative RNA-binding... 71 8e-11
ref|NP_193166.2| RNA binding / nucleic acid binding [Arabid... 71 8e-11
dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus ... 70 1e-10
gb|AAN49119.1| RNA-binding protein [Leptospira interrogans ... 70 1e-10
ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recogniti... 70 1e-10
ref|XP_884345.1| PREDICTED: similar to Probable RNA-binding... 70 1e-10
ref|XP_649094.1| TIA-1 protein [Entamoeba histolytica HM-1:... 70 1e-10
ref|XP_872013.1| PREDICTED: similar to RNA-binding region (... 70 1e-10
ref|XP_875397.1| PREDICTED: similar to testes-specific hete... 70 1e-10
ref|XP_591446.1| PREDICTED: similar to Probable RNA-binding... 70 1e-10
ref|XP_884271.1| PREDICTED: similar to RNA-binding region (... 70 1e-10
gb|AAI14041.1| Unknown (protein for MGC:137496) [Bos taurus] 70 1e-10
dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleopr... 70 1e-10
ref|XP_464699.1| putative heterogeneous nuclearribonucleopr... 70 1e-10
>ref|NP_914833.1| putative glycine-rich RNA-binding protein 2 [Oryza sativa (japonica
cultivar-group)]
emb|CAA05729.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
dbj|BAB86134.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
dbj|BAB92683.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
Length = 150
Score = 179 bits (454), Expect = 2e-43
Identities = 85/121 (70%), Positives = 101/121 (83%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MAAFNKLG LRHS L S + GSSPA+FNAARLMSTKLF+GGL W +D L+EAF+SF
Sbjct: 1 MAAFNKLGSFLRHSGLTSSASAGSSPAMFNAARLMSTKLFVGGLSWNTNDDSLKEAFTSF 60
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
G+VTEARVI DRE+GRSRGFGFV++++ D AK A+ AMDGKE++GR +RVN ANERP GN
Sbjct: 61 GDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANERPPGN 120
Query: 391 R 389
R
Sbjct: 121 R 121
>gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 145 bits (366), Expect = 2e-33
Identities = 70/118 (59%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSP--AVFNAARLMSTKLFIGGLDWGVDDVKLREAFS 578
MA NKLGGLLR S +SP A+ NA R MS++LF+GGL WG DD L+EAF+
Sbjct: 1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFT 60
Query: 577 SFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
SFG+V +A+VI DR++GRSRGFGFVN+SD D AKEA++AMDG+++ GR +RVN+A ER
Sbjct: 61 SFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118
>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
Length = 144
Score = 144 bits (363), Expect = 5e-33
Identities = 69/117 (58%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSS-PAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSS 575
MA +NKLGGLLR S + ++ S P++ +A R MSTKLF+GGL WG DD LR+AF++
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFAT 60
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
FG+V +ARVI DR++GRSRGFGFVN+SD + A EAI AMDG+E+ GR +RV++A ER
Sbjct: 61 FGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117
>emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 143 bits (361), Expect = 9e-33
Identities = 73/121 (60%), Positives = 90/121 (74%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA NKLGGLLR + +G +S + + RLMSTKLFIGGL WG DD LR+AF+ F
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTS--MLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
G+V +A+VI DRETGRSRGFGFVN++D AA AIS MDGKE++GR +RVN AN+RP+
Sbjct: 59 GDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAP 118
Query: 391 R 389
R
Sbjct: 119 R 119
>ref|NP_849377.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / nucleic
acid binding [Arabidopsis thaliana]
Length = 153
Score = 143 bits (361), Expect = 9e-33
Identities = 73/121 (60%), Positives = 90/121 (74%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA NKLGGLLR + +G +S + + RLMSTKLFIGGL WG DD LR+AF+ F
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTS--MLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
G+V +A+VI DRETGRSRGFGFVN++D AA AIS MDGKE++GR +RVN AN+RP+
Sbjct: 59 GDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAP 118
Query: 391 R 389
R
Sbjct: 119 R 119
>ref|NP_193121.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / nucleic
acid binding [Arabidopsis thaliana]
emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor
(AtGRP2)
Length = 158
Score = 143 bits (361), Expect = 9e-33
Identities = 73/121 (60%), Positives = 90/121 (74%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA NKLGGLLR + +G +S + + RLMSTKLFIGGL WG DD LR+AF+ F
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTS--MLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
G+V +A+VI DRETGRSRGFGFVN++D AA AIS MDGKE++GR +RVN AN+RP+
Sbjct: 59 GDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAP 118
Query: 391 R 389
R
Sbjct: 119 R 119
>dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 140 bits (354), Expect = 6e-32
Identities = 68/117 (58%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSS-PAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSS 575
MA +NKLGGLLR S + ++ S ++ +A R MSTKLF+GGL WG DD LR+AF++
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFAT 60
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
FG+V +ARVI DR++GRSRGFGFVN+SD + A EAI AMDG+E+ GR +RV +A ER
Sbjct: 61 FGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQER 117
>gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 138 bits (348), Expect = 3e-31
Identities = 70/121 (57%), Positives = 88/121 (72%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA NKL G+LR VS + G ++ + R MS+KLF+GGL WG DD L++AF+SF
Sbjct: 1 MAFCNKLSGILRQG--VSHSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSF 58
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
GEVTEA VI DRETGRSRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER +
Sbjct: 59 GEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
Query: 391 R 389
R
Sbjct: 119 R 119
>ref|NP_850629.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
ref|NP_189025.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
Length = 136
Score = 138 bits (348), Expect = 3e-31
Identities = 70/121 (57%), Positives = 88/121 (72%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA NKL G+LR VS + G ++ + R MS+KLF+GGL WG DD L++AF+SF
Sbjct: 1 MAFCNKLSGILRQG--VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSF 58
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGN 392
GEVTEA VI DRETGRSRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER +
Sbjct: 59 GEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
Query: 391 R 389
R
Sbjct: 119 R 119
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
Length = 146
Score = 131 bits (330), Expect = 4e-29
Identities = 70/122 (57%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAFSS 575
MA NKLG LLR A S SS + N R MS+ KLFIGGL +GVDD L++AF+S
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSS--MLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFAS 58
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
+GEV EARVITDR+TGRSRGFGFVN++ ++A A+SAMDG++++GR +RV+ AN+RP+
Sbjct: 59 YGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPSA 118
Query: 394 NR 389
R
Sbjct: 119 PR 120
>emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 131 bits (330), Expect = 4e-29
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 6 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 65
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 66 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 100
>gb|ABA98638.1| RNA-binding protein precursor [Oryza sativa (japonica
cultivar-group)]
Length = 258
Score = 129 bits (323), Expect = 2e-28
Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAFSS 575
MA NK+G LL+ + SSPA++ + R MS+ KLF+GGL +G D+ LR+ F++
Sbjct: 1 MALANKIGNLLKRAT-------SSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFAN 53
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
+G+V EA++I DRETGRSRGFGF+ Y+ S+ A AI+A+DGK++DGR +RVN ANER G
Sbjct: 54 YGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANERTGG 113
Query: 394 NR 389
R
Sbjct: 114 FR 115
>ref|NP_200911.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
Length = 309
Score = 119 bits (297), Expect = 2e-25
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 3/122 (2%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSA--LVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 581
MA +K G +L+ + ++ SSP++F A R MS+ KLFIGG+ + +D+ LREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 580 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
+ +GEV + RVI DRETGRSRGFGFV ++ S+AA AI A+DG+++ GR V+VN AN+R
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 400 AG 395
+G
Sbjct: 121 SG 122
>dbj|BAA05170.1| RNA-binding glycine rich protein (RGP-2) [Nicotiana sylvestris]
Length = 259
Score = 117 bits (292), Expect = 9e-25
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Frame = -3
Query: 751 MAAFNKLGGLL-----RHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLR 590
MA NK+G +L RH+ L S +++ A R MS+ KLF+GGL WG D+ L+
Sbjct: 1 MAFVNKIGNMLKQIVSRHANLE---LCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLK 57
Query: 589 EAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMAN 410
EAFS GEV EARVI DR+TGRSRGFGFV+++ ++ A A++A+DG+++ GRQ+RVN A
Sbjct: 58 EAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYAT 117
Query: 409 ERPAGN 392
E+ G+
Sbjct: 118 EKLRGS 123
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 115 bits (289), Expect = 2e-24
Identities = 58/119 (48%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGIT--GGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 581
MA FN++G +L+ S S+ ++F A R MS+ KLF+GGL +G D+ L+EAF
Sbjct: 1 MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60
Query: 580 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
S +G+V EARVI DR+TGRSRGFGF+++ S+ A A+ AMDG+++ GR++RVN A E+
Sbjct: 61 SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEK 119
>dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 114 bits (285), Expect = 6e-24
Identities = 60/126 (47%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSS----PAVFNAARLMS-TKLFIGGLDWGVDDVKLRE 587
MA +LGGL+R S + + SS PA+F +R MS +KLF+GGL WG D ++E
Sbjct: 1 MAFLAQLGGLVRQSIARNALQRHSSAAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKE 60
Query: 586 AFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANE 407
AFS+FGEVTE ++I DR+TGRSRGFGFV ++ A+ A+ A+DG+++ GR +RVN A +
Sbjct: 61 AFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATK 120
Query: 406 RPAGNR 389
+ +R
Sbjct: 121 QSPQDR 126
>gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 113 bits (283), Expect = 1e-23
Identities = 57/119 (47%), Positives = 82/119 (68%), Gaps = 3/119 (2%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSA--LVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 581
MA NK+G +L+H + S+ ++F R MS+ KLF+GGL +G D+ L+E F
Sbjct: 1 MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60
Query: 580 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
S +GEV EARVI DRETGRSRGFGF+++ S+ A A+ AMDG+++ GR+++VN A E+
Sbjct: 61 SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEK 119
>gb|AAM01112.1| Putative RNA-binding protein [Oryza sativa]
Length = 119
Score = 105 bits (263), Expect = 2e-21
Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAFSS 575
MA K+G L+R SA GS +F A R MS+ KLFIGG+ +G DD L+EAF++
Sbjct: 1 MAFLRKVGNLVRQSA-------GSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFAN 53
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 449
+GEV EARVI DR TGRSRGFGFV Y+ +D A AI+ MDGK
Sbjct: 54 YGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGK 95
>dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 104 bits (259), Expect = 6e-21
Identities = 56/119 (47%), Positives = 79/119 (66%)
Frame = -3
Query: 754 AMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSS 575
+MA KLGG + V ++ + R MSTKL+IGGL G D+ L++AFSS
Sbjct: 32 SMAFCTKLGGHWKQGVNVP------VSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSS 85
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPA 398
F VTEARV+T++ TGRSRG+GFVN+ D+A AISAM+G+E++G + VN+A + P+
Sbjct: 86 FNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPS 144
>emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 103 bits (258), Expect = 8e-21
Identities = 56/118 (47%), Positives = 78/118 (66%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA KLGG + V ++ + R MSTKL+IGGL G D+ L++AFSSF
Sbjct: 1 MAFCTKLGGHWKQGVNVP------VSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSF 54
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPA 398
VTEARV+T++ TGRSRG+GFVN+ D+A AISAM+G+E++G + VN+A + P+
Sbjct: 55 NGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPS 112
>ref|NP_568681.1| RPS19; RNA binding [Arabidopsis thaliana]
gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor
Length = 212
Score = 103 bits (258), Expect = 8e-21
Identities = 56/118 (47%), Positives = 78/118 (66%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MA KLGG + V ++ + R MSTKL+IGGL G D+ L++AFSSF
Sbjct: 1 MAFCTKLGGHWKQGVNVP------VSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSF 54
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPA 398
VTEARV+T++ TGRSRG+GFVN+ D+A AISAM+G+E++G + VN+A + P+
Sbjct: 55 NGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPS 112
>emb|CAA05728.1| OsGRP1 [Oryza sativa (japonica cultivar-group)]
Length = 160
Score = 102 bits (253), Expect = 3e-20
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS+FGE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>gb|ABA99935.1| glycine-rich RNA-binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 102 bits (253), Expect = 3e-20
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS+FGE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>dbj|BAA06521.1| cp31 [Arabidopsis thaliana]
Length = 304
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 220 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 279
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 280 LDGQNLEGRAIRVNVAEERP 299
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 126 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 185
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 186 FNRYDLNGRLLTVNKA--APRGSR 207
>gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
gb|AAK95304.1| AT4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 305 LDGQNLEGRAIRVNVAEERP 324
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 211 FNRYDLNGRLLTVNKA--APRGSR 232
>ref|NP_194208.1| RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding [Arabidopsis
thaliana]
emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor (RNA-binding
protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33)
(RNA-binding protein cp31)
gb|AAA32860.1| 31 kDa RNA binding protein
prf||1921382A RNA-binding protein
gb|AAA18378.1| RNA-binding protein 1
Length = 329
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 305 LDGQNLEGRAIRVNVAEERP 324
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 211 FNRYDLNGRLLTVNKA--APRGSR 232
>emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 226 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 285
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 286 LDGQNLEGRAIRVNVAEERP 305
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 132 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 191
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 192 FNRYDLNGRLLTVNKA--APRGSR 213
>gb|AAA18380.1| RNA-binding protein 3
Length = 162
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 78 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 137
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 138 LDGQNLEGRAIRVNVAEERP 157
Score = 49.3 bits (116), Expect = 2e-04
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -3
Query: 583 FSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
F G V A VI +RET +SRGFGFV S D A+ A+ + +++GR + VN A
Sbjct: 3 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKA--A 60
Query: 403 PAGNR 389
P G+R
Sbjct: 61 PRGSR 65
>gb|AAA18379.1| RNA-binding protein 2
Length = 315
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 231 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 290
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 291 LDGQNLEGRAIRVNVAEERP 310
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 137 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 196
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 197 FNRYDLNGRLLTVNKA--APRGSR 218
>dbj|BAA06520.1| cp31 [Arabidopsis thaliana]
Length = 314
Score = 101 bits (252), Expect = 4e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D EAISA
Sbjct: 230 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 289
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 290 LDGQNLEGRAIRVNVAEERP 309
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + V+ L F G V A VI +RET +SRGFGFV S D A+ A+
Sbjct: 136 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 195
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ +++GR + VN A P G+R
Sbjct: 196 FNRYDLNGRLLTVNKA--APRGSR 217
>gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 101 bits (251), Expect = 5e-20
Identities = 45/82 (54%), Positives = 61/82 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L+EAFS +GEV E+++I+DRETGRSRGFGFV ++D + ++AI A
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GK +DGR + VN A R G
Sbjct: 69 MNGKMLDGRSITVNPAQSRGNG 90
>gb|AAB65412.1| glycine-rich protein [Oryza sativa]
Length = 161
Score = 101 bits (251), Expect = 5e-20
Identities = 46/90 (51%), Positives = 63/90 (70%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAGN 392
++AI M+GKE+DGR + VN A R +G+
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSGS 91
>dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 100 bits (250), Expect = 7e-20
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAF FGEV + +VITDRETGRSRGFGFV ++D ++ EAI
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 460 MDGKEIDGRQVRVNMANERPAGN 392
M+GKE+DGR + VN A R G+
Sbjct: 66 MNGKELDGRNITVNQAQSRGGGS 88
>emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa (indica
cultivar-group)]
Length = 194
Score = 100 bits (250), Expect = 7e-20
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
gb|EAA74887.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 100 bits (249), Expect = 9e-20
Identities = 43/83 (51%), Positives = 63/83 (75%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
+KL++G L W D LR+ FS FGEVT++ ++ DR+TGR+RGFGFV +S + A A+
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 463 AMDGKEIDGRQVRVNMANERPAG 395
A++ +E+DGR++RVN+AN RPAG
Sbjct: 62 ALNEQELDGRRIRVNVANARPAG 84
>ref|NP_177563.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gb|AAG52402.1| putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 100 bits (248), Expect = 1e-19
Identities = 53/120 (44%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAFSS 575
MA +K+G L ++ S +T SS + + R MS+ K+F+GG+ + D+ LREAFS
Sbjct: 1 MAFLSKVGRLFSQTS--SHVTASSS--MLQSIRCMSSSKIFVGGISYSTDEFGLREAFSK 56
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
+GEV +A++I DRETGRSRGF FV ++ ++ A A+ +DG+++ GR++RVN A ER +G
Sbjct: 57 YGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERGSG 115
>emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)
Length = 291
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = -3
Query: 730 GGLLRHSALVSGITGGSSPAVFNAARLM--STKLFIGGLDWGVDDVKLREAFSSFGEVTE 557
GG +S+ G G SS R + S ++++G L WGVDD+ L+E FS G V +
Sbjct: 176 GGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVD 235
Query: 556 ARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
A+V+ DR++GRSRGFGFV YS S +AI +++G ++DGR +RV+ A ERP
Sbjct: 236 AKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERP 287
Score = 67.4 bits (163), Expect = 8e-10
Identities = 38/81 (46%), Positives = 45/81 (55%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD L F G V VI D+ TGRSRGFGFV S + + A
Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147
Query: 460 MDGKEIDGRQVRVNMANERPA 398
+G EIDGR +RVN A PA
Sbjct: 148 FNGYEIDGRAIRVN-AGPAPA 167
>gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 99.4 bits (246), Expect = 2e-19
Identities = 51/120 (42%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAFSS 575
MA +K+G + R ++ + +T +S + + R MS+ K+F+GG+ + D+ LREAFS
Sbjct: 1 MAFLSKVGKIFRQTS--AHVTASNS--MLQSIRCMSSSKIFVGGISYSTDEFGLREAFSK 56
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
+GEV +A++I DRETGRSRGF FV ++ ++ A A+ +DG+++ GR++RVN A ER +G
Sbjct: 57 YGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERGSG 115
>dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae]
Length = 125
Score = 99.4 bits (246), Expect = 2e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ S K+++G L W +D LR+ FS FG V +A V+ DRETGRSRGFGFV +S A
Sbjct: 1 MSSAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI ++ +E+DGR++RVN+AN RPAG
Sbjct: 61 AIGGLNEQELDGRRIRVNLANARPAG 86
>gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 99.4 bits (246), Expect = 2e-19
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L++AFS +GE+ +A++I DRETGRSRGFGFV + ++ ++AI
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GKE+DGR + VN A R +G
Sbjct: 67 MNGKELDGRNITVNEAQSRRSG 88
>gb|AAA33486.1| nucleic acid-binding protein
Length = 303
Score = 99.4 bits (246), Expect = 2e-19
Identities = 45/82 (54%), Positives = 61/82 (74%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VDD +L E FS G+V +ARV+ DRETGRSRGFGFV + D +AI
Sbjct: 218 SLRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAI 277
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ +DGR +RVN+A ERP
Sbjct: 278 AALDGQSLDGRALRVNVAEERP 299
Score = 61.6 bits (148), Expect = 5e-08
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+++G L + VD +L + F G V A VI +RET +SRGFGFV S + A++A+
Sbjct: 126 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEM 185
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+++GR + VN A P G+R
Sbjct: 186 FHRYDVNGRLLTVNKA--APRGSR 207
>gb|AAB66885.1| glycine-rich protein [Oryza sativa]
Length = 161
Score = 99.0 bits (245), Expect = 3e-19
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W D+ L AFS++GE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 98.6 bits (244), Expect = 3e-19
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L+ AFS +GE+ +A++I DRETGRSRGFGFV + ++ ++AI
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 460 MDGKEIDGRQVRVNMANER 404
M+GKE+DGRQV VN A R
Sbjct: 67 MNGKELDGRQVTVNEAQSR 85
>emb|CAA41152.1| glycine-rich protein [Daucus carota]
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein
prf||1908438A Gly-rich protein
Length = 157
Score = 98.6 bits (244), Expect = 3e-19
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W +D L +AFS FG++T++++I DRETGRSRGFGFV + D + ++AI
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+E+DGR + VN A R +G
Sbjct: 67 MNGQELDGRNITVNEAQSRGSG 88
>gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 98.6 bits (244), Expect = 3e-19
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GE+ ++++I DRETGRSRGFGFV +S +
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa]
Length = 165
Score = 98.6 bits (244), Expect = 3e-19
Identities = 45/89 (50%), Positives = 61/89 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W D+ L AFS++GE+ E+++I DRETGRSRGFGFV +S A
Sbjct: 2 AAPDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMSGKELDGRNITVNEAQSRRSG 90
>emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)
Length = 292
Score = 98.2 bits (243), Expect = 4e-19
Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = -3
Query: 730 GGLLRHSALVSGITGGSSPAVFNAARLM--STKLFIGGLDWGVDDVKLREAFSSFGEVTE 557
GG +S+ G G SS R + S ++++G L WGVDD+ L+E FS G V +
Sbjct: 177 GGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVD 236
Query: 556 ARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
A+V+ DR++GRSRGFGFV YS + +AI +++G ++DGR +RV+ A ERP
Sbjct: 237 AKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERP 288
Score = 65.5 bits (158), Expect = 3e-09
Identities = 37/81 (45%), Positives = 45/81 (55%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD L F G V VI D+ +GRSRGFGFV S + + A
Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148
Query: 460 MDGKEIDGRQVRVNMANERPA 398
+G EIDGR +RVN A PA
Sbjct: 149 FNGYEIDGRAIRVN-AGPAPA 168
>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 98.2 bits (243), Expect = 4e-19
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VDD +L + FS G+V EARV+ DRETGRSRGFGFV S +AI+A
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ +DGR +RVN+A +RP
Sbjct: 276 LDGQSLDGRAIRVNVAEDRP 295
Score = 65.1 bits (157), Expect = 4e-09
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD L E F G V A VI +RET +SRGFGFV S + A++A+
Sbjct: 122 KLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEM 181
Query: 460 MDGKEIDGRQVRVNMANERPA 398
+ +I+GR + VN A R A
Sbjct: 182 FNRYDINGRLLTVNKAAPRGA 202
>emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 98.2 bits (243), Expect = 4e-19
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = -3
Query: 634 FIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMD 455
F+GGL W D L +AFS++GEV ++++I DRETGRSRGFGFV + D + KEAIS M+
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMN 69
Query: 454 GKEIDGRQVRVNMANERPAG 395
G E+DGR + VN A R +G
Sbjct: 70 GSELDGRNITVNEAQARGSG 89
>ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 98.2 bits (243), Expect = 4e-19
Identities = 44/85 (51%), Positives = 63/85 (74%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M+ K+++G L W D L AFS++G++T+ V+ DRETGRSRGFGFV ++ A A
Sbjct: 1 MAAKVYVGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAA 60
Query: 469 ISAMDGKEIDGRQVRVNMANERPAG 395
I+A++ +E+DGR++RVNMAN RPAG
Sbjct: 61 IAALNEQELDGRRIRVNMANSRPAG 85
>gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 12 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 71
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 72 MRSAIEGMNGKELDGRNITVNEAQSR 97
>gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 7 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 66
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 67 MRSAIEGMNGKELDGRNITVNEAQSR 92
>gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 9 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDA 68
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 69 MRSAIEGMNGKELDGRNITVNEAQSR 94
>gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
Length = 145
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 2 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 62 MRSAIEGMNGKELDGRNITVNEAQSR 87
>gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 12 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 71
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 72 MRSAIEGMNGKELDGRNITVNEAQSR 97
>gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 6 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 65
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 66 MRSAIEGMNGKELDGRNITVNEAQSR 91
>gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 5 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 64
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 65 MRSAIEGMNGKELDGRNITVNEAQSR 90
>gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 4 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 63
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 64 MRSAIEGMNGKELDGRNITVNEAQSR 89
>gb|AAB07749.1| low temperature-responsive RNA-binding protein
Length = 161
Score = 97.8 bits (242), Expect = 6e-19
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L+ AFS +G+V ++++ITDRETGRSRGFGFV ++ +A ++AI A
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 460 MDGKEIDGRQVRVNMANER 404
M+G+++DGR + VN A R
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 97.8 bits (242), Expect = 6e-19
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AFS++G+V E+++I DRETGRSRGFGFV +S A ++AI
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 68 MNGQDLDGRNITVNEAQSRGSG 89
>gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 97.8 bits (242), Expect = 6e-19
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA
Sbjct: 5 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 64
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 65 MRSAIEGMNGKELDGRNITVNEAQSR 90
>gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 97.4 bits (241), Expect = 8e-19
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS +GEV E+++I DRETGRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGGG 88
>emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 97.4 bits (241), Expect = 8e-19
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VD +L + FS G+V ARV++DRETGRSRGFGFV S +AI
Sbjct: 141 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 200
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ +DGR VRVN+A ERP
Sbjct: 201 AALDGQTLDGRAVRVNVAEERP 222
Score = 73.6 bits (179), Expect = 1e-11
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD KL F + G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 49 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 108
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++G ++DGRQ+ VN A R + R
Sbjct: 109 LNGYDMDGRQLTVNKAAPRGSPER 132
>pir||S15348 RNA-binding protein, 28K - spinach
Length = 233
Score = 97.4 bits (241), Expect = 8e-19
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VD +L + FS G+V ARV++DRETGRSRGFGFV S +AI
Sbjct: 148 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ +DGR VRVN+A ERP
Sbjct: 208 AALDGQTLDGRAVRVNVAEERP 229
Score = 73.6 bits (179), Expect = 1e-11
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD KL F + G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++G ++DGRQ+ VN A R + R
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPER 139
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP)
Length = 233
Score = 97.4 bits (241), Expect = 8e-19
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VD +L + FS G+V ARV++DRETGRSRGFGFV S +AI
Sbjct: 148 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ +DGR VRVN+A ERP
Sbjct: 208 AALDGQTLDGRAVRVNVAEERP 229
Score = 73.6 bits (179), Expect = 1e-11
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD KL F + G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++G ++DGRQ+ VN A R + R
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPER 139
>emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10
Length = 169
Score = 97.4 bits (241), Expect = 8e-19
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D +L FS FGEV ++++I DRETGRSRGFGFV + D + K+AI
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GKE+DGR + VN A R G
Sbjct: 67 MNGKELDGRTITVNEAQSRGGG 88
>gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 97.1 bits (240), Expect = 1e-18
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS +GEV E+++I DRETGRSRGFGFV + D + K+AI
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR V VN A R +G
Sbjct: 69 MNGQTLDGRNVTVNEAQSRGSG 90
>gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 97.1 bits (240), Expect = 1e-18
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S DA + AI
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 460 MDGKEIDGRQVRVNMANER 404
M+GKE+DGR + VN A R
Sbjct: 63 MNGKELDGRNITVNEAQSR 81
>dbj|BAA03741.1| RNA-binding glycine-rich protein-1 (RGP-1a) [Nicotiana sylvestris]
Length = 156
Score = 96.7 bits (239), Expect = 1e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS FGE+ ++++I DRETGRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 96.7 bits (239), Expect = 1e-18
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AFS +GE+ E ++I DRETGRSRGFGFV ++ + K+AI A
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGGG 90
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A
gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
Length = 166
Score = 96.7 bits (239), Expect = 1e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AFS +GEV ++++I DRETGRSRGFGFV + D + K+AI
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 96.3 bits (238), Expect = 2e-18
Identities = 47/100 (47%), Positives = 63/100 (63%)
Frame = -3
Query: 700 SGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRS 521
SG GG + R+ ++G L WGVDD+ L FS G+V EARVI DR++GRS
Sbjct: 190 SGYGGGGGSGAGSGNRV-----YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRS 244
Query: 520 RGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
+GFGFV Y S + AI ++DG ++DGRQ+RV+ A RP
Sbjct: 245 KGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARP 284
Score = 69.7 bits (169), Expect = 2e-10
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD +L + F S G V VI D+ TGRSRGFGFV S + A
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G E+DGR +RVN P
Sbjct: 152 FNGYELDGRPLRVNAGPPPP 171
>ref|NP_181259.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAK43982.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor
Length = 289
Score = 96.3 bits (238), Expect = 2e-18
Identities = 47/100 (47%), Positives = 63/100 (63%)
Frame = -3
Query: 700 SGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRS 521
SG GG + R+ ++G L WGVDD+ L FS G+V EARVI DR++GRS
Sbjct: 190 SGYGGGGGSGAGSGNRV-----YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRS 244
Query: 520 RGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
+GFGFV Y S + AI ++DG ++DGRQ+RV+ A RP
Sbjct: 245 KGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARP 284
Score = 69.7 bits (169), Expect = 2e-10
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD +L + F S G V VI D+ TGRSRGFGFV S + A
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G E+DGR +RVN P
Sbjct: 152 FNGYELDGRPLRVNAGPPPP 171
>emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
prf||1410284A abscisic acid inducible gene
Length = 157
Score = 96.3 bits (238), Expect = 2e-18
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W + L AF+S+GE+ +++VITDRETGRSRGFGFV +S ++
Sbjct: 2 AAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
+AI M+GKE+DGR + VN A R G
Sbjct: 62 MLDAIENMNGKELDGRNITVNQAQSRGGG 90
>gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 96.3 bits (238), Expect = 2e-18
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS +GEV E++VI DRETGRSRGFGFV + D + K+AI
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R +G
Sbjct: 69 MNGQTLDGRNITVNEAQSRGSG 90
>emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 96.3 bits (238), Expect = 2e-18
Identities = 40/80 (50%), Positives = 62/80 (77%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G + W VD+++L + FS +G+V EAR++ DRETGRSRGFGFV S ++AI+A
Sbjct: 231 RVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEMEDAIAA 290
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG ++DGR ++V+MA ERP
Sbjct: 291 LDGSDLDGRAIKVSMAQERP 310
Score = 62.4 bits (150), Expect = 3e-08
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+F+G L + ++ L + F+ G V A VI +RET +SRGFGFV+ S + +AI
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
D +I+GR + VN A P G+R
Sbjct: 197 FDRYDINGRTLTVNKA--APRGSR 218
>gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
Length = 166
Score = 96.3 bits (238), Expect = 2e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L +AFS +GEV E+++I DRETGRSRGFGFV +S+ + +AI
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R +G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 322
Score = 95.9 bits (237), Expect = 2e-18
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VDD +L + FS G+V +ARV+ DRETGRSRGFGFV + + +AI
Sbjct: 236 SFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAI 295
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ +DGR +RVN+A ERP
Sbjct: 296 AALDGQSLDGRALRVNVAEERP 317
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+++G L + +D +L + F G V + VI +RET RSRGFGFV S + A++A+
Sbjct: 144 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 203
Query: 460 MDGKEIDGRQVRVNMANERPA 398
++DGR + VN A R A
Sbjct: 204 FHRYDVDGRLLTVNKAAPRGA 224
>ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa]
gb|AAL82527.1| putative ribonucleoprotein [Oryza sativa]
Length = 265
Score = 95.9 bits (237), Expect = 2e-18
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
A R + ++++G L WGVD+ L FS GEV EA+VI DRE+GRSRGFGFV Y ++
Sbjct: 174 APRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERP 401
+ A+S +DG ++DGRQ+RV +A +P
Sbjct: 234 VENAVSNLDGADMDGRQIRVTVAESKP 260
Score = 63.9 bits (154), Expect = 9e-09
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++F+G L + VD +L F G V VI D+ TGRSRGFGFV S + + A+
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G +DGR +RVN P
Sbjct: 147 FNGYILDGRSLRVNSGPPPP 166
>emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2
Length = 168
Score = 95.9 bits (237), Expect = 2e-18
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W ++ L +AF++FG+V +++VITDRETGRSRGFGFV +S +
Sbjct: 2 AAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
+AI M+GKE+DGR + VN A R G
Sbjct: 62 MLDAIENMNGKELDGRNITVNQAQSRGGG 90
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A
gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
Length = 169
Score = 95.9 bits (237), Expect = 2e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D+ L AFS FGE+ ++++I DRETGRSRGFGFV + D + K+AI
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 95.5 bits (236), Expect = 3e-18
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS +GE+ E+++I DRETGRSRGFGFV + D + ++AI
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R +G
Sbjct: 69 MNGQTLDGRNITVNEAQSRGSG 90
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D+ L AFS FGE+ E+++I DRETGRSRGFGFV +S+ A ++AI
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R +G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>ref|NP_187457.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gb|AAF21210.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 143
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLFIGGL W VD+ L++AFSSFGEV E R+ D+ +GRSRGFGFV++++ A A
Sbjct: 40 SSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAK 99
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
AMDGK + GR +R++ A ER G
Sbjct: 100 DAMDGKGLLGRPLRISFALERVRG 123
>gb|AAA33039.1| RNA-binding protein
Length = 289
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VDD +L + FS G+V ARV++DRETGRSRGF FV + EAI
Sbjct: 204 SFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAI 263
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
A+DG+ ++GR +RVN+A ERP
Sbjct: 264 GALDGQTLEGRAIRVNVAEERP 285
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD KL + F G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 112 KLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 171
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
E++GR + VN A P G+R
Sbjct: 172 YHKFEVNGRFLTVNKA--APRGSR 193
>ref|NP_850017.1| ATGRP7; RNA binding [Arabidopsis thaliana]
Length = 159
Score = 95.5 bits (236), Expect = 3e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AF+ +G+V ++++I DRETGRSRGFGFV + D A K+AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>ref|NP_179760.1| ATGRP7; RNA binding [Arabidopsis thaliana]
emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gb|AAL16149.1| At2g22292/F2G1.7_ [Arabidopsis thaliana]
gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7
gb|AAA32853.1| RNA-binding protein
Length = 176
Score = 95.5 bits (236), Expect = 3e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AF+ +G+V ++++I DRETGRSRGFGFV + D A K+AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>gb|AAB66884.1| glycine-rich protein [Oryza sativa]
Length = 162
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GE+ ++++I DRETGRS GFGF+ +S +
Sbjct: 2 AAPDVKYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+GKE+DGR + VN A R +G
Sbjct: 62 MRDAIEGMNGKELDGRNITVNEAQSRRSG 90
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 95.5 bits (236), Expect = 3e-18
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W D L EAFS++GEV E+++I DRETGRSRGFGFV +++ +
Sbjct: 2 AAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
++AI M+G+ +DGR + VN A R G
Sbjct: 62 MRDAIEGMNGQNLDGRNITVNEAQSRGGG 90
>dbj|BAA03743.1| RNA-binding gricine-rich protein-1 (RGP-1c) [Nicotiana sylvestris]
Length = 165
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS +GEV E+++I DRETGRSRGFGFV + D + ++AI
Sbjct: 7 RCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 95.5 bits (236), Expect = 3e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AF+ +G+V ++++I DRETGRSRGFGFV + D A K+AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 95.1 bits (235), Expect = 4e-18
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S A
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 95.1 bits (235), Expect = 4e-18
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W ++ L AF++FG+V +++VITDRETGRSRGFGFV +S +
Sbjct: 2 AAADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQS 61
Query: 481 AKEAISAMDGKEIDGRQVRVNMANERPAG 395
+AI M+GKE+DGR + VN A R G
Sbjct: 62 MLDAIENMNGKELDGRNITVNQAQSRGGG 90
>gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 161
Score = 95.1 bits (235), Expect = 4e-18
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ ++K+++G L W D L + FS++G VT+ V+ DRETGRSRGFGFV Y A+
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI+AM+ +E+DGR+VRVNMAN R +G
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSRGSG 86
>gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 182
Score = 95.1 bits (235), Expect = 4e-18
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ ++K+++G L W D L + FS++G VT+ V+ DRETGRSRGFGFV Y A+
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI+AM+ +E+DGR+VRVNMAN R +G
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSRGSG 86
>gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 95.1 bits (235), Expect = 4e-18
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S A
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 95.1 bits (235), Expect = 4e-18
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S A
Sbjct: 5 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 64
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 65 MRSAIEGMNGKELDGRNITVNEAQSR 90
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 94.7 bits (234), Expect = 5e-18
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L EAFS++G++ E+++I DRETGRSRGFGFV + D + ++AI
Sbjct: 9 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEG 68
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+ +DGR + VN A R +G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 94.7 bits (234), Expect = 5e-18
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L +AFS +GE+ ++++I DRETGRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>ref|XP_483744.1| nucleic acid-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 131
Score = 94.4 bits (233), Expect = 6e-18
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ ++G L W VDD +L + FS GEV A V+ DRE+GRSRGFGFV+ + + +AISA
Sbjct: 48 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 107
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+E+DGR +RVN+A ERP
Sbjct: 108 LDGQELDGRPLRVNVAAERP 127
>ref|NP_849524.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
Length = 92
Score = 94.4 bits (233), Expect = 6e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W +D L+ FS FG+V ++++I DRE+GRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GKE+DGR + VN A R +G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>ref|NP_849523.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
Length = 126
Score = 94.4 bits (233), Expect = 6e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W +D L+ FS FG+V ++++I DRE+GRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GKE+DGR + VN A R +G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>ref|XP_483743.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
ref|XP_507331.1| PREDICTED OJ1150_A11.19-2 gene product [Oryza sativa (japonica
cultivar-group)]
dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 305
Score = 94.4 bits (233), Expect = 6e-18
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ ++G L W VDD +L + FS GEV A V+ DRE+GRSRGFGFV+ + + +AISA
Sbjct: 222 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 281
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+E+DGR +RVN+A ERP
Sbjct: 282 LDGQELDGRPLRVNVAAERP 301
Score = 64.7 bits (156), Expect = 5e-09
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+++G L + VD L + F G V A VI +RETG+SRGFGFV S + A +AI
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++ +I+GR + VN A P G+R
Sbjct: 188 LNRYDINGRLLNVNRA--APRGSR 209
>ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
gb|EAA71543.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 94.4 bits (233), Expect = 6e-18
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
MS K+++G L W D LR AF +G++ ++ V+ DR+TGRSRGFGFV + S A+ A
Sbjct: 1 MSAKVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETA 60
Query: 469 ISAMDGKEIDGRQVRVNMANERPAG 395
I +++ +E+DGR+++VN+AN RP G
Sbjct: 61 IISLNEQELDGRRIKVNLANARPGG 85
>emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)
pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
Length = 276
Score = 94.4 bits (233), Expect = 6e-18
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G + W +DD +L + FS G+V ARV+ DRE+GRSRGFGFV S EAI+
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 460 MDGKEIDGRQVRVNMANERPAGN 392
+DG+ +DGR +RVN A ERP N
Sbjct: 252 LDGQTLDGRTIRVNAAEERPRRN 274
Score = 62.0 bits (149), Expect = 4e-08
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + +D L + F G V A VI +RET RSRGFGFV S + A +A+
Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+++GR + VN A P G+R
Sbjct: 158 YSQYDLNGRLLTVNKA--APRGSR 179
>ref|NP_195637.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 (CCR1 protein)
gb|AAA32854.1| RNA-binding protein
gb|AAA20201.1| ORF
Length = 169
Score = 94.4 bits (233), Expect = 6e-18
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W +D L+ FS FG+V ++++I DRE+GRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GKE+DGR + VN A R +G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
Length = 162
Score = 94.0 bits (232), Expect = 8e-18
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D +L AF FGEV +++VI+DRETGRSRGFGFV ++D ++ AI
Sbjct: 8 RCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKE 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+E+DGR + VN A R G
Sbjct: 68 MNGQELDGRNITVNQAQSRGGG 89
>gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 94.0 bits (232), Expect = 8e-18
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S
Sbjct: 11 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXX 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 XRSAIEGMNGKELDGRNITVNEAQSR 96
>gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 94.0 bits (232), Expect = 8e-18
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S
Sbjct: 5 AASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXX 64
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 65 XRSAIEGMNGKELDGRNITVNEAQSR 90
>ref|NP_917982.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa (japonica cultivar-group)]
dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa (japonica cultivar-group)]
Length = 264
Score = 94.0 bits (232), Expect = 8e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S KL++G L WGVD+ L FS G V +A+VI DRE+GRSRGFGFV Y ++ AI
Sbjct: 179 SNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAI 238
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
S +DG ++DGRQ+RV +A +P
Sbjct: 239 SNLDGVDLDGRQIRVTVAESKP 260
Score = 66.2 bits (160), Expect = 2e-09
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+F+G L + VD +L F G V V+ DR+TGRSRGFGFV S ++ A A+
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G GR +RVN P
Sbjct: 141 FNGYTFQGRPLRVNSGPPPP 160
>gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 93.6 bits (231), Expect = 1e-17
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L AFS +G+V +A V+ DRETGRSRGFGFV + + AKEA+ A
Sbjct: 8 KLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHA 67
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV++A + G R
Sbjct: 68 MNGESLDGRQIRVDLAGKSSGGGR 91
>emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor
Length = 315
Score = 93.6 bits (231), Expect = 1e-17
Identities = 40/85 (47%), Positives = 59/85 (69%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G + WG+DD +L + FS G+V ARV+ DRETGRSRGFGFV + +AI
Sbjct: 229 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 288
Query: 466 SAMDGKEIDGRQVRVNMANERPAGN 392
+ +DG+ +DGR +RVN+A +R N
Sbjct: 289 ANLDGQSLDGRTIRVNVAEDRSRRN 313
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD L F G V A VI +R+T +SRGFGFV S + A++A+
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 460 MDGKEIDGRQVRVNMANER 404
+ +++GR + VN A R
Sbjct: 197 YNRYDVNGRLLTVNKAARR 215
>dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 93.6 bits (231), Expect = 1e-17
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VDD +L E FS G+V +ARV+ DR+TGRSRGFGFV + +AI
Sbjct: 208 SFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAI 267
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ ++GR +RVN+A ERP
Sbjct: 268 AALDGQSLEGRALRVNVAEERP 289
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+++G L + VD +L + F G V + VI +RET +SRGFGFV S + A++A+
Sbjct: 116 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 175
Query: 460 MDGKEIDGRQVRVNMANERPA 398
+++GR + VN A R A
Sbjct: 176 FHRYDVNGRLLTVNKAAPRGA 196
>emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 93.6 bits (231), Expect = 1e-17
Identities = 41/82 (50%), Positives = 61/82 (74%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VDD +L E FS G+V +A+V+ DR+TGRSRGFGFV + + +AI
Sbjct: 209 SFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAI 268
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
+A+DG+ ++GR +RVN+A ERP
Sbjct: 269 AALDGQSLEGRALRVNVAEERP 290
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+++G L + VD +L + F G V + VI +RET +SRGFGFV S + A++A+
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 460 MDGKEIDGRQVRVNMANERPA 398
+++GR + VN A R A
Sbjct: 177 FHRYDVNGRLLTVNKAAPRGA 197
>ref|NP_190914.1| CP29; RNA binding [Arabidopsis thaliana]
gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding
protein cp29)
pir||T45886 RNA-binding protein cp29 protein - Arabidopsis thaliana
Length = 342
Score = 93.2 bits (230), Expect = 1e-17
Identities = 41/80 (51%), Positives = 60/80 (75%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+L++G L WGVDD+ L F+ G+V EARVI DR++GRS+GFGFV S S ++AI++
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 460 MDGKEIDGRQVRVNMANERP 401
++G ++DGRQ+RV+ A RP
Sbjct: 318 LNGADLDGRQIRVSEAEARP 337
Score = 68.2 bits (165), Expect = 5e-10
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD +L + F S G V VI D+ TGRSRGFGFV S + + A
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G E +GR +RVN P
Sbjct: 160 FNGYEFEGRPLRVNAGPPPP 179
>dbj|BAA06519.1| cp29 [Arabidopsis thaliana]
Length = 326
Score = 93.2 bits (230), Expect = 1e-17
Identities = 41/80 (51%), Positives = 60/80 (75%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+L++G L WGVDD+ L F+ G+V EARVI DR++GRS+GFGFV S S ++AI++
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 460 MDGKEIDGRQVRVNMANERP 401
++G ++DGRQ+RV+ A RP
Sbjct: 302 LNGADLDGRQIRVSEAEARP 321
Score = 68.2 bits (165), Expect = 5e-10
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD +L + F S G V VI D+ TGRSRGFGFV S + + A
Sbjct: 92 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 151
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G E +GR +RVN P
Sbjct: 152 FNGYEFEGRPLRVNAGPPPP 171
>ref|NP_850692.1| CP29; RNA binding [Arabidopsis thaliana]
dbj|BAA06518.1| cp29 [Arabidopsis thaliana]
Length = 334
Score = 93.2 bits (230), Expect = 1e-17
Identities = 41/80 (51%), Positives = 60/80 (75%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+L++G L WGVDD+ L F+ G+V EARVI DR++GRS+GFGFV S S ++AI++
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 460 MDGKEIDGRQVRVNMANERP 401
++G ++DGRQ+RV+ A RP
Sbjct: 310 LNGADLDGRQIRVSEAEARP 329
Score = 68.2 bits (165), Expect = 5e-10
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD +L + F S G V VI D+ TGRSRGFGFV S + + A
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G E +GR +RVN P
Sbjct: 160 FNGYEFEGRPLRVNAGPPPP 179
>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 92.8 bits (229), Expect = 2e-17
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L+EAFS +GE+ ++++I DRETGRSRGFGFV +++ + ++AI
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+ +E+DGR + VN A R +G
Sbjct: 68 MNSQELDGRNITVNEAQSRGSG 89
>gb|AAF06329.1| glycine-rich RNA binding protein [Medicago sativa]
Length = 105
Score = 92.8 bits (229), Expect = 2e-17
Identities = 38/82 (46%), Positives = 59/82 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D+ L +AFS +GE+ ++++I DRETGRSRGFGFV +++ + + I A
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G+++DGR + VN A R +G
Sbjct: 67 MNGQDLDGRNITVNQAQSRGSG 88
>gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDA 482
AA + + F+GGL W D L AFS++GEV E+++I DRET RSRGFGFV +S A
Sbjct: 11 AASDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
Query: 481 AKEAISAMDGKEIDGRQVRVNMANER 404
+ AI M+GKE+DGR + VN A R
Sbjct: 71 MRSAIEGMNGKELDGRNITVNEAQSR 96
>ref|NP_199836.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 289
Score = 92.4 bits (228), Expect = 2e-17
Identities = 43/91 (47%), Positives = 64/91 (70%)
Frame = -3
Query: 676 PAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNY 497
P V++AA ++++G L W VD +L FS G+V +ARV++DRETGRSRGFGFV
Sbjct: 200 PRVYDAA----FRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQM 255
Query: 496 SDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
S+ + AI+A+DG+ ++GR ++VN+A ER
Sbjct: 256 SNENEVNVAIAALDGQNLEGRAIKVNVAEER 286
Score = 62.4 bits (150), Expect = 3e-08
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD L F G V + VI +R+T +SRGFGFV S + A++A+
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 173
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ E++GR++ VN A P G+R
Sbjct: 174 FNSFEVNGRRLTVNRA--APRGSR 195
>ref|XP_754757.1| hypothetical protein Afu3g08580 [Aspergillus fumigatus Af293]
gb|EAL92719.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
Length = 118
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
+KLFIGGL W D LR+ F +G V EA V+ DR+T RSRGFGFV +S A A+
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 463 AMDGKEIDGRQVRVNMANERPAGN 392
AM+ +E DGR +RV+ A+ERPA N
Sbjct: 62 AMNNQEFDGRTIRVDKASERPARN 85
>dbj|BAA03742.1| RNA-binding glycine-rich protein-1 (RGP-1b) [Nicotiana sylvestris]
Length = 148
Score = 92.4 bits (228), Expect = 2e-17
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = -3
Query: 634 FIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMD 455
F+GGL W D L +AF ++GEV ++++I DRETGRSRGFGFV + D ++AI M+
Sbjct: 9 FVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMN 68
Query: 454 GKEIDGRQVRVNMANERPAG 395
G+E+DGR + VN A R +G
Sbjct: 69 GQELDGRSITVNEAQARGSG 88
>emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 91.7 bits (226), Expect = 4e-17
Identities = 39/80 (48%), Positives = 59/80 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W +DD +L + FS G+V ARV+ DRETGRSRGFGFV SD +AI+A
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR ++V++A +RP
Sbjct: 267 LDGQILEGRTIKVSVAEDRP 286
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L + VD KL F G V A VI +RET +SRGFGFV S + A+ +
Sbjct: 110 KLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAAK 169
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
+ + +GR + VN A P G+R
Sbjct: 170 FNRYDYNGRPLTVNKA--APRGSR 191
>emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 91.7 bits (226), Expect = 4e-17
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W DD L AFS++GEV E+++I DRET RSRGFGFV +S + + I
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 460 MDGKEIDGRQVRVNMANER 404
M+GKE+DGR + VN A R
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 91.3 bits (225), Expect = 5e-17
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + + L EAFS +G +++ VI DRETGR RGFGFV Y + + AK+A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGR +RVN A + G R
Sbjct: 66 MNGQSLDGRTIRVNEAGQGGGGGR 89
>ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL W D LRE FS +G + EA V+ DR+T RSRGFGFV ++ A A+ A
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 460 MDGKEIDGRQVRVNMANERPA 398
M+ +E DGR +RV+ A+ERPA
Sbjct: 63 MNNQEFDGRIIRVDKASERPA 83
>ref|XP_868602.1| PREDICTED: similar to cold inducible RNA binding protein isoform 4
[Canis familiaris]
Length = 219
Score = 90.9 bits (224), Expect = 7e-17
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Frame = -3
Query: 694 ITGGSSPAVFNAARLMST--KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRS 521
+T SS A A + S KLF+GGL + ++ L + FS +G+++E V+ DRET RS
Sbjct: 34 VTPESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRS 93
Query: 520 RGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANE 407
RGFGFV + + D AK+A+ AM+GK +DGRQ+RV+ A +
Sbjct: 94 RGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 131
>emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 90.9 bits (224), Expect = 7e-17
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S + ++G L W +D +L + FS GEV A ++ DRETGRSRGFGFV + + AI
Sbjct: 198 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 257
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
SA+DG+E+DGR +RVN+A ERP
Sbjct: 258 SALDGQEMDGRPLRVNVAAERP 279
Score = 64.7 bits (156), Expect = 5e-09
Identities = 55/174 (31%), Positives = 82/174 (47%)
Frame = -3
Query: 925 HIAPAPSPKLREARAQQNPSRLPVLFLS*TPSRAAIARPLVRRLSCSYRSSPSGLVFAMA 746
H A A KL A A LP++F R+ R + L S ++ +GL +A A
Sbjct: 20 HPAFAAQHKLAPASAS-----LPLIFSRAPLLRSTRPRVPLTPLVTSSDAAEAGLDWADA 74
Query: 745 AFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGE 566
+ + V +GG A + A K+++G L + VD +L + F G
Sbjct: 75 --EEAEETVTEEEPVVAASGGD--AGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGV 130
Query: 565 VTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
V A VI ++E+G+SRGFGFV S + A +AI + I GR + VN A +R
Sbjct: 131 VEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIETFNRYNISGRLLNVNRAAQR 184
>gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
Length = 166
Score = 90.9 bits (224), Expect = 7e-17
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL++ ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 66 MNGKAVDGRQIRVDQAGKSSGDRR 89
>gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 90.5 bits (223), Expect = 9e-17
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L+EAFS +GE+ ++++I DRETGRSRGFGFV +++ + ++AI
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+ +E+DGR VN A R G
Sbjct: 68 MNSQELDGRNTTVNEAQSRGNG 89
>ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gb|EAL92802.1| nucleolin protein (Nsr1), putative [Aspergillus fumigatus Af293]
Length = 546
Score = 90.5 bits (223), Expect = 9e-17
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L W VD+ LR+ F SFGE++ R++TDR++GRSRGFG+V Y ++ A +A
Sbjct: 301 SANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAY 360
Query: 466 SAMDGKEIDGRQVRVNMANERPAGN 392
+A EIDGR++ ++ A RPA N
Sbjct: 361 NAKKDTEIDGRKINLDYATGRPANN 385
Score = 67.0 bits (162), Expect = 1e-09
Identities = 29/83 (34%), Positives = 52/83 (62%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G + + ++ + E F G + R+ TD E+GR +GFG+V +S D A++A
Sbjct: 407 SDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAF 466
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
+ ++G E++GR VR++ + RP+
Sbjct: 467 NDLNGAELNGRPVRLDFSTPRPS 489
>gb|AAH06580.1| Rbm3 protein [Mus musculus]
dbj|BAE21846.1| unnamed protein product [Mus musculus]
dbj|BAE32335.1| unnamed protein product [Mus musculus]
dbj|BAE39828.1| unnamed protein product [Mus musculus]
dbj|BAB22957.1| unnamed protein product [Mus musculus]
dbj|BAB24981.1| unnamed protein product [Mus musculus]
gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 (RNA-binding motif protein 3)
gb|AAI06177.1| Rbm3 protein [Mus musculus]
dbj|BAA32060.1| rbm3 [Mus musculus]
Length = 153
Score = 90.1 bits (222), Expect = 1e-16
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 90.1 bits (222), Expect = 1e-16
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>gb|AAH59098.1| Rbm3 protein [Mus musculus]
dbj|BAC40108.1| unnamed protein product [Mus musculus]
dbj|BAC33821.1| unnamed protein product [Mus musculus]
ref|NP_058089.2| RNA binding motif protein 3 [Mus musculus]
Length = 154
Score = 90.1 bits (222), Expect = 1e-16
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 89.7 bits (221), Expect = 2e-16
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>ref|XP_343774.2| PREDICTED: RNA binding motif (RNP1, RRM) protein 3 [Rattus
norvegicus]
Length = 156
Score = 89.7 bits (221), Expect = 2e-16
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>ref|XP_863171.1| PREDICTED: similar to RNA binding motif protein 3 isoform 2 [Canis
familiaris]
Length = 162
Score = 89.7 bits (221), Expect = 2e-16
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + F SFG ++E V+ DRET RSRGFGF+ ++D + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 89.7 bits (221), Expect = 2e-16
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D L +AFS + EV E+++I DRETGRSRGFGFV + D A ++AI
Sbjct: 7 RCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 460 MDGKEIDGRQVRVNMANER 404
M+ +++DGR + VN A R
Sbjct: 67 MNRQDLDGRNITVNEAQSR 85
>ref|XP_868600.1| PREDICTED: similar to cold inducible RNA binding protein isoform 2
[Canis familiaris]
Length = 185
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>gb|AAI02774.1| Hypothetical protein LOC507120 [Bos taurus]
ref|NP_001029450.1| hypothetical protein LOC507120 [Bos taurus]
Length = 213
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 14 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 74 MNGKSVDGRQIRVDQAGK 91
>ref|NP_001271.1| cold inducible RNA binding protein [Homo sapiens]
gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
emb|CAH89574.1| hypothetical protein [Pongo pygmaeus]
gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gb|AAC04895.1| CIRP [Homo sapiens]
dbj|BAA11212.1| CIRP [Homo sapiens]
Length = 172
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>ref|XP_533961.1| PREDICTED: similar to cold inducible RNA binding protein isoform 1
[Canis familiaris]
Length = 172
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>ref|NP_001026518.1| cold inducible RNA binding protein [Gallus gallus]
emb|CAG31295.1| hypothetical protein [Gallus gallus]
Length = 190
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>ref|XP_868601.1| PREDICTED: similar to cold inducible RNA binding protein isoform 3
[Canis familiaris]
Length = 164
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
ref|NP_112409.2| cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 89.0 bits (219), Expect = 3e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
dbj|BAE21245.1| unnamed protein product [Mus musculus]
dbj|BAB29491.1| unnamed protein product [Mus musculus]
gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
ref|NP_031731.1| cold inducible RNA binding protein [Mus musculus]
dbj|BAA11213.1| CIRP [Mus musculus]
dbj|BAA19092.1| CIRP [Rattus norvegicus]
Length = 172
Score = 89.0 bits (219), Expect = 3e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + FS +G+++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK +DGRQ+RV+ A +
Sbjct: 67 MNGKSVDGRQIRVDQAGK 84
>ref|ZP_00592006.1| RNA-binding region RNP-1 (RNA recognition motif) [Prosthecochloris
aestuarii DSM 271]
gb|EAN22693.1| RNA-binding region RNP-1 (RNA recognition motif) [Prosthecochloris
aestuarii DSM 271]
Length = 90
Score = 88.6 bits (218), Expect = 4e-16
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG LD+GV + LREAF FG+V+ A +ITD+ TGRS+GFGFV S SD A EAI ++
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 457 DGKEIDGRQVRVNMAN---ERPA 398
+ +++GR ++VN A ERPA
Sbjct: 63 NDTDLNGRTIKVNEAKPRAERPA 85
>gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 88.2 bits (217), Expect = 5e-16
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL++ ++ L +AF+ +G ++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERR 89
>gb|AAG09816.1| cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 88.2 bits (217), Expect = 5e-16
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL++ ++ L +AF+ +G ++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 6 KLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERR 89
>dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 88.2 bits (217), Expect = 5e-16
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + F +G+++E V+ DRET RSRGFGFV + + + AK+A+ A
Sbjct: 8 KLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEA 67
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 68 MNGKSVDGRQIRVDQAGKSSGDRR 91
>sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (xCIRP)
pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 88.2 bits (217), Expect = 5e-16
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL++ ++ L +AF+ +G ++E V+ DRET RSRGFGFV + + D AK+A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERR 89
>ref|NP_006734.1| RNA binding motif protein 3 isoform a [Homo sapiens]
gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 (RNA-binding motif protein 3) (RNPL)
gb|AAB17212.1| RNPL
Length = 157
Score = 88.2 bits (217), Expect = 5e-16
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RSRGFGF+ +++ + A A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 88.2 bits (217), Expect = 5e-16
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + ++ L + F +G+++E V+ DRET RSRGFGFV + + + AK+A+ A
Sbjct: 8 KLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEA 67
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+GK +DGRQ+RV+ A + R
Sbjct: 68 MNGKSVDGRQIRVDQAGKSSGDRR 91
>gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 88.2 bits (217), Expect = 5e-16
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+G L W DV L++AF FG VTE +V+ D+ +GRSRGFGFV + D A +EA+ A
Sbjct: 8 RCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G ++DGR + V A + +G
Sbjct: 68 MNGIDLDGRNITVERAQPQGSG 89
>ref|NP_956311.1| cold inducible RNA binding protein [Danio rerio]
gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
Length = 184
Score = 87.8 bits (216), Expect = 6e-16
Identities = 40/78 (51%), Positives = 57/78 (73%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL + + L EAFS +G + + VI DRET RSRGFGFV + + + AK+A++A
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 460 MDGKEIDGRQVRVNMANE 407
M+GK++DGR +RV+ A +
Sbjct: 66 MNGKQVDGRMIRVDEAGK 83
>dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 87.4 bits (215), Expect = 8e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL + D+ L FS +G++ E V+ DRET RSRGFGFV + + + AK+A++
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66
Query: 460 MDGKEIDGRQVRVNMA----NERPAGNR 389
M+GK +DGRQ+RV+ A N+R G R
Sbjct: 67 MNGKTVDGRQIRVDQAGKSSNDRRGGYR 94
>gb|AAB04133.1| cutinase negative acting protein
Length = 507
Score = 87.4 bits (215), Expect = 8e-16
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
T LF G L W +DD L EAF F + ARV+T++ TGRSRGFG+V+++D + +A
Sbjct: 251 TTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCTKAYE 310
Query: 463 AMDGKEIDGRQVRVNMANERPA 398
AM G E+DGR + ++ AN RPA
Sbjct: 311 AMQGFELDGRALNLDYANARPA 332
Score = 58.2 bits (139), Expect = 5e-07
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L VD +RE F EV R+ TD ++G +GFG+V+++ + AK I
Sbjct: 355 SDTLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKAVI 414
Query: 466 SAMDGKEID----GRQVRVNMANERP 401
A +G I R VR++ A+ RP
Sbjct: 415 DAKNGAPIGNGRMSRSVRLDFASSRP 440
>dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae]
Length = 127
Score = 87.4 bits (215), Expect = 8e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
+KLFIGGL W D LR F +G V EA V+ DR+TGRSRGFGFV +S A+ A
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAH 61
Query: 463 AMDGKEIDGRQVRVNMANERPAGN 392
M+ +E DGR +RV+ A+ER N
Sbjct: 62 EMNNQEFDGRTIRVDKASERAPRN 85
>emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)
Length = 273
Score = 87.4 bits (215), Expect = 8e-16
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = -3
Query: 715 HSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDR 536
+S+ G GG S F++ S ++++G L WGVD L FS G+V +A+V+ DR
Sbjct: 171 NSSFRGGSRGGGS---FDS----SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 223
Query: 535 ETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
++GRSRGFGFV YS ++ AI ++DG +++GR +RV+ A RP
Sbjct: 224 DSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARP 268
Score = 68.9 bits (167), Expect = 3e-10
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Frame = -3
Query: 850 FLS*TPSRAAIARPLVRRLSCSYRS-SPSGLVFAMAAFNKL--GGLLRHSAL-----VSG 695
FLS TP + +P + S S+ S PS L ++++ + +R L +
Sbjct: 10 FLSLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIED 69
Query: 694 ITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRG 515
+ G K+F+G L + D L E F G V VI D+ TGRSRG
Sbjct: 70 VEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129
Query: 514 FGFVNYSDSDAAKEAISAMDGKEIDGRQVRVN 419
FGFV S + + A +G E+DGR +RVN
Sbjct: 130 FGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161
>emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)
Length = 279
Score = 87.4 bits (215), Expect = 8e-16
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = -3
Query: 715 HSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDR 536
+S+ G GG S F++ S ++++G L WGVD L FS G+V +A+V+ DR
Sbjct: 177 NSSFRGGSRGGGS---FDS----SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 229
Query: 535 ETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERP 401
++GRSRGFGFV YS ++ AI ++DG +++GR +RV+ A RP
Sbjct: 230 DSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARP 274
Score = 67.0 bits (162), Expect = 1e-09
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Frame = -3
Query: 850 FLS*TPSRAAIARPLVRRLSCSYRS-SPSGLVFAMAAFNKL--GGLLRHSAL-----VSG 695
FLS TP + +P + S S+ S PS L ++++ + +R L +
Sbjct: 10 FLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIED 69
Query: 694 ITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRG 515
+ G K+F+G L + D L E F G V VI D+ TGRSRG
Sbjct: 70 VEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRG 129
Query: 514 FGFVNYSDSDAAKEAISAMDGKEIDGRQVRVN 419
FGFV S + + A +G E+DGR +RVN
Sbjct: 130 FGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161
>ref|XP_965121.1| hypothetical protein [Neurospora crassa N150]
ref|XP_331935.1| predicted protein [Neurospora crassa]
gb|EAA35885.1| predicted protein [Neurospora crassa]
Length = 193
Score = 87.4 bits (215), Expect = 8e-16
Identities = 45/82 (54%), Positives = 55/82 (67%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL W DD LR F FG V EA V+ DR+TGRSRGFGFV Y + A+ AI+
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIAN 62
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
MDG+E VRV+ A++R AG
Sbjct: 63 MDGQE-----VRVDKASDRAAG 79
>ref|NP_001017228.1| hypothetical protein LOC549982 [Xenopus tropicalis]
emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus tropicalis]
Length = 166
Score = 87.4 bits (215), Expect = 8e-16
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ + L + FS +G+V E V+ DRE+ RSRGFGFV + + + AK+A+ A
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 460 MDGKEIDGRQVRVNMA----NERPAGNR 389
M+GK +DGRQ+RV+ A N+R G R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSNDRRGGYR 94
>ref|ZP_00766004.1| RNA-binding region RNP-1 (RNA recognition motif) [Chloroflexus
aurantiacus J-10-fl]
gb|EAO61001.1| RNA-binding region RNP-1 (RNA recognition motif) [Chloroflexus
aurantiacus J-10-fl]
Length = 100
Score = 86.3 bits (212), Expect = 2e-15
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M KLF+G L W VDD L F +G+V ARVI DRETGRSRGFGFV +D A
Sbjct: 1 MYVKLFVGNLAWSVDDATLEAFFQDYGDVRSARVINDRETGRSRGFGFVEMEVADVA-TV 59
Query: 469 ISAMDGKEIDGRQVRVNMANER 404
IS +G+ I+GR++RVN A ++
Sbjct: 60 ISQTNGRPINGREIRVNEAEDK 81
>gb|AAA79045.1| 24 kDa RNA binding protein
Length = 220
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++ +G L W VDD L+ FS G+V EA+VI DR+TGRSRGFGFV Y+ ++ AI
Sbjct: 134 SNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAI 193
Query: 466 SAMDGKEIDGRQVRVNMANER 404
++DG +++GR +RV A R
Sbjct: 194 ESLDGVDLNGRSIRVTAAEAR 214
Score = 61.6 bits (148), Expect = 5e-08
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+F+G L + VD +L F + G V VI D+ TGRSRGFGFV S + + A
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 460 MDGKEIDGRQVRV 422
+ E+DGR +RV
Sbjct: 99 FNNYELDGRTLRV 111
>ref|NP_920649.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAN04953.1| Putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP52936.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa (japonica cultivar-group)]
Length = 147
Score = 85.9 bits (211), Expect = 2e-15
Identities = 46/95 (48%), Positives = 58/95 (61%)
Frame = -3
Query: 733 LGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEA 554
L G+LR+ L G A R + GG+ +G DD L+EAF+++GEV EA
Sbjct: 37 LQGILRYGLLAEGWEPRQ------AVRRLGLAAVPGGISYGTDDQSLKEAFANYGEVIEA 90
Query: 553 RVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 449
RVI DR TGRSRGFGFV Y+ +D A AI+ MDGK
Sbjct: 91 RVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGK 125
>gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
Length = 105
Score = 85.5 bits (210), Expect = 3e-15
Identities = 39/86 (45%), Positives = 60/86 (69%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ +K+++G L W DD+ LR AF ++G V ++ V+ DR+T RSRGFGFV +S ++ A+
Sbjct: 1 MSGSKVYVGNLSWSTDDMSLRTAFEAYGLVVDSIVMKDRDTNRSRGFGFVTFSTTEEAEA 60
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI+ +D +E +RVNMAN RP+G
Sbjct: 61 AIAGLDQQE----NIRVNMANARPSG 82
>ref|XP_896365.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
ref|XP_915071.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 85.1 bits (209), Expect = 4e-15
Identities = 38/84 (45%), Positives = 61/84 (72%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ D+ L + FSSFG ++E V+ DRET RS+GF F+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKFARGSR 90
>gb|AAO90692.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493]
ref|NP_820178.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493]
Length = 103
Score = 85.1 bits (209), Expect = 4e-15
Identities = 37/88 (42%), Positives = 58/88 (65%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ K+++G L + V +L+ F +GE+ EA++I DRETGRS+GF F+ Y DAA+E
Sbjct: 1 MSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQE 60
Query: 472 AISAMDGKEIDGRQVRVNMANERPAGNR 389
A+S +G ++ GR++RVN+A E R
Sbjct: 61 AVSKANGIDLQGRKIRVNIARENTGDRR 88
>ref|ZP_01150371.1| RNA-binding region RNP-1 (RNA recognition motif) [Desulfotomaculum
reducens MI-1]
gb|EAR42206.1| RNA-binding region RNP-1 (RNA recognition motif) [Desulfotomaculum
reducens MI-1]
Length = 85
Score = 85.1 bits (209), Expect = 4e-15
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
L++G L W L AF +GEV +RVITDRETGRSRGFGFV +D+DA K I+A+
Sbjct: 4 LYVGNLPWSTKAEDLASAFEQYGEVLSSRVITDRETGRSRGFGFVEVNDTDADK-MIAAL 62
Query: 457 DGKEIDGRQVRVNMANERPAG 395
+G E+ GR + VN A R AG
Sbjct: 63 NGTELGGRVITVNEAKSREAG 83
>gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 84.7 bits (208), Expect = 5e-15
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S ++++G L W VD +L FS G+V +A+V+ DR++GRSRGFGFV YS + +AI
Sbjct: 203 SNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAI 262
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
++DG ++ GR +RV+ A RP
Sbjct: 263 ESLDGVDLGGRAIRVSPAEARP 284
Score = 72.4 bits (176), Expect = 3e-11
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+F+G L + VD L E F G+V VI D+ TGRSRGFGFV S +A + A
Sbjct: 100 KIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQ 159
Query: 460 MDGKEIDGRQVRVNMANERP 401
+G EIDGR +RVN P
Sbjct: 160 FNGYEIDGRALRVNSGPAPP 179
>dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae]
Length = 440
Score = 84.7 bits (208), Expect = 5e-15
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L W VD+ L+ F FGE++ R++T+R+TGRSRGFG+V Y+++ A +A
Sbjct: 194 SANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 253
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
A EIDGR++ ++ A RPA
Sbjct: 254 EAKRDTEIDGRKINLDYATGRPA 276
Score = 68.2 bits (165), Expect = 5e-10
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G + + ++ L E F G + R+ TD E+GR +GFG+V +S + A+EA
Sbjct: 302 SDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAF 361
Query: 466 SAMDGKEIDGRQVRVNMANER 404
+ ++G EIDGR VR++ + R
Sbjct: 362 NELNGAEIDGRPVRLDFSTPR 382
>emb|CAH25380.1| putative glycine-rich RNA-binding protein [Guillardia theta]
Length = 152
Score = 84.7 bits (208), Expect = 5e-15
Identities = 57/155 (36%), Positives = 78/155 (50%)
Frame = -3
Query: 862 LPVLFLS*TPSRAAIARPLVRRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGG 683
LPVLFL+ T + A + PL + SP L ++ R A +G++
Sbjct: 6 LPVLFLAVTAASAFVP-PLKNPFPALFGISPCNLPCIASS--------RPVARFAGLS-- 54
Query: 682 SSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFV 503
L K F+ GL W + LR+ F+ FG + +A V+ DRETGRSRGFGFV
Sbjct: 55 -------MQELDPNKCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFV 107
Query: 502 NYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPA 398
+++S + AI+AMD I GR V V AN R A
Sbjct: 108 TFAESADCEAAITAMDKANIGGRTVLVKQANVREA 142
>ref|XP_657084.1| RNA-binding protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL51698.1| RNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 136
Score = 84.3 bits (207), Expect = 7e-15
Identities = 37/85 (43%), Positives = 60/85 (70%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
T+L+IG L + V D L+ AF FG VT+ +V+TDR++ RS+GFGFV + + AK+AI
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 463 AMDGKEIDGRQVRVNMANERPAGNR 389
M+ +E++GR+++V+++ R G R
Sbjct: 62 EMNEQELEGRRIKVDVSRPREEGRR 86
>ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 84.3 bits (207), Expect = 7e-15
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+++G L + + +LRE F+++G V R++TDR+TGR RGFGFV SD+DAA AI A+
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDTDAA-SAIEAL 62
Query: 457 DGKEIDGRQVRVNMANER 404
DGK+ GR +RVN A ER
Sbjct: 63 DGKDFGGRNLRVNEAQER 80
>ref|ZP_00769324.1| RNA-binding region RNP-1 (RNA recognition motif) [Chloroflexus
aurantiacus J-10-fl]
gb|EAO57573.1| RNA-binding region RNP-1 (RNA recognition motif) [Chloroflexus
aurantiacus J-10-fl]
Length = 94
Score = 84.3 bits (207), Expect = 7e-15
Identities = 43/83 (51%), Positives = 52/83 (62%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M KLF+G L W V D +L F GEV ARVI DR+TGRSRGFGFV ++ A
Sbjct: 1 MLVKLFVGNLPWNVGDAELGSIFEPHGEVQSARVINDRDTGRSRGFGFVEIETNNVA-AV 59
Query: 469 ISAMDGKEIDGRQVRVNMANERP 401
I A DG E+ GR +RVN A ++P
Sbjct: 60 IRATDGLEVGGRNLRVNEAEDKP 82
>emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
ref|NP_011675.1| Nucleolar protein that binds nuclear localization sequences,
required for pre-rRNA processing and ribosome
biogenesis; Nsr1p [Saccharomyces cerevisiae]
sp|P27476|NSR1_YEAST Nuclear localization sequence binding protein (P67)
Length = 414
Score = 84.3 bits (207), Expect = 7e-15
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W +DD L++ F G V ARVI +R T RSRG+G+V++ + A++AI M
Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229
Query: 457 DGKEIDGRQVRVNMANERPAGN 392
GKEIDGR + +M+ +PAGN
Sbjct: 230 QGKEIDGRPINCDMSTSKPAGN 251
Score = 67.4 bits (163), Expect = 8e-10
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D + E F+ GEV R+ T ET + +GFG+V +S+ + AK+A+
Sbjct: 266 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 325
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
A+ G+ ID R VR++ ++ RP
Sbjct: 326 DALQGEYIDNRPVRLDFSSPRP 347
>gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 84.3 bits (207), Expect = 7e-15
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W +DD L++ F G V ARVI +R T RSRG+G+V++ + A++AI M
Sbjct: 5 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 64
Query: 457 DGKEIDGRQVRVNMANERPAGN 392
GKEIDGR + +M+ +PAGN
Sbjct: 65 QGKEIDGRPINCDMSTSKPAGN 86
Score = 67.4 bits (163), Expect = 8e-10
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D + E F+ GEV R+ T ET + +GFG+V +S+ + AK+A+
Sbjct: 101 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 160
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
A+ G+ ID R VR++ ++ RP
Sbjct: 161 DALQGEYIDNRPVRLDFSSPRP 182
>ref|NP_001017797.1| hypothetical protein LOC550495 [Danio rerio]
gb|AAH95030.1| Hypothetical protein LOC550495 [Danio rerio]
gb|AAH93299.1| Hypothetical protein LOC550495 [Danio rerio]
Length = 185
Score = 84.3 bits (207), Expect = 7e-15
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLFIGGL + + L +AFS +G +T V +RET RSRGFGFV + + D AK+A+
Sbjct: 6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+GK +DGR +RV+ A + G
Sbjct: 66 MNGKSVDGRTIRVDEAGKGGGG 87
>gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 84.0 bits (206), Expect = 9e-15
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
+KLFIGGL W ++ LR+ F FG V EA V+ DR+TGRSRGFGFV Y++ A +AI
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 463 AMDGKEI---DGRQVRVNMANE 407
AM+ ++ DGRQ+RV+ A++
Sbjct: 62 AMNNVDLPSFDGRQIRVDKASD 83
>emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 83.6 bits (205), Expect = 1e-14
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
T +++G L + + +LR AF +GEV+ +I DRETGRSRGF FV +D++ AK+AI
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 463 AMDGKEIDGRQVRVNMANER 404
++G EIDGR V VN A R
Sbjct: 126 NLNGHEIDGRSVTVNEARPR 145
>ref|XP_485004.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 83.6 bits (205), Expect = 1e-14
Identities = 38/84 (45%), Positives = 59/84 (70%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ + L FSSFG ++E V+ DRET RS GFGF+ +++ + A +A+ A
Sbjct: 7 KLFVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>ref|NP_189273.1| ARRZ-1A; RNA binding / nucleotide binding [Arabidopsis thaliana]
dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gb|AAL11606.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
Length = 245
Score = 83.6 bits (205), Expect = 1e-14
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ FIGGL W D LR+AF +G + EA+V+ D+ +GRSRGFGF+ + + A EAI+A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G ++DGR + V+ A G
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGG 89
>gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/119 (37%), Positives = 66/119 (55%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
M F++ G + R + S+ + L +K+F+GGL D L+EAF SF
Sbjct: 1 MGLFSRAGNIFRQPRALQA----SNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSF 56
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
G++ +A V+ DRE+G SRGFGFV Y + A A+ AM KE+DGR + V+ A+ G
Sbjct: 57 GKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADSGGGG 115
>gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 83.6 bits (205), Expect = 1e-14
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ FIGGL W D LR+AF +G + EA+V+ D+ +GRSRGFGF+ + + A EAI+A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G ++DGR + V+ A G
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGG 89
>ref|NP_173298.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAF98412.1| Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
Length = 155
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/119 (37%), Positives = 66/119 (55%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
M F++ G + R + S+ + L +K+F+GGL D L+EAF SF
Sbjct: 4 MGLFSRAGNIFRQPRALQA----SNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSF 59
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
G++ +A V+ DRE+G SRGFGFV Y + A A+ AM KE+DGR + V+ A+ G
Sbjct: 60 GKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADSGGGG 118
>emb|CAB86413.1| gar2 [Schizosaccharomyces pombe]
ref|NP_593531.1| hypothetical protein SPAC140.02 [Schizosaccharomyces pombe 972h-]
sp|P41891|GAR2_SCHPO Protein gar2
Length = 500
Score = 83.2 bits (204), Expect = 1e-14
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W VDD L + F +G + ARVI D ++GRS+G+G+V++ +AAK A++A
Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324
Query: 457 DGKEIDGRQVRVNMANERPA 398
KEIDGR V ++++N RPA
Sbjct: 325 GTKEIDGRMVNLDLSNPRPA 344
Score = 60.5 bits (145), Expect = 1e-07
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S +F+G L + + L AF G++ R+ TD ++GR +GFG+V +SD D+AK+ +
Sbjct: 365 SDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV 424
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
M+G I GR R++ + R G
Sbjct: 425 E-MNGHFIAGRPCRLDFSTPRTGG 447
>gb|ABC18895.1| RNA-binding region RNP-1 [Moorella thermoacetica ATCC 39073]
ref|YP_429438.1| RNA-binding region RNP-1 [Moorella thermoacetica ATCC 39073]
Length = 81
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
L++G L W + +L AF+S GEV AR+ITDR+TGRSRGFGFV +D+D A + I+AM
Sbjct: 4 LYVGNLPWATSEEELARAFASHGEVLSARIITDRQTGRSRGFGFVEVNDAD-ADQMIAAM 62
Query: 457 DGKEIDGRQVRVNMANER 404
+G E+ GR + VN A R
Sbjct: 63 NGAELGGRILTVNEARAR 80
>dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum IAM
14863]
ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum IAM
14863]
Length = 86
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/85 (47%), Positives = 52/85 (61%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M +++G L W LR F +GEV AR+ITDRETGRSRGFGFV+ +D +AA+ A
Sbjct: 1 MPFSIYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETGRSRGFGFVDMADEEAARRA 60
Query: 469 ISAMDGKEIDGRQVRVNMANERPAG 395
I+ + E GR + VN A R G
Sbjct: 61 IAELHNYEYGGRPLTVNEAQARQGG 85
>gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Pelodictyon
luteolum DSM 273]
ref|YP_374928.1| RNA-binding region RNP-1 (RNA recognition motif) [Pelodictyon
luteolum DSM 273]
Length = 90
Score = 83.2 bits (204), Expect = 1e-14
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+++G L + + + LR+AFS FGEV A +ITD+ +GRS+GFGFV D DAA+EAI +M
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 457 DGKEIDGRQVRVNMANER 404
K+ GR + VN A R
Sbjct: 63 HNKDFKGRSIMVNEAKPR 80
>ref|ZP_00532200.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides BS1]
gb|EAM63421.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides BS1]
Length = 89
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG LD+GV + LREAF FGEV+ A +I+D+ TGRS+GFGFV + A +AI A+
Sbjct: 3 IYIGNLDYGVSEEDLREAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDAL 62
Query: 457 DGKEIDGRQVRVNMA---NERPAGNR 389
+ +++GR ++VN A ERP+ R
Sbjct: 63 NDTDLNGRSIKVNQARPREERPSRPR 88
>ref|XP_468382.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica
cultivar-group)]
ref|XP_507042.1| PREDICTED OJ1293_E04.28 gene product [Oryza sativa (japonica
cultivar-group)]
dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica
cultivar-group)]
dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica
cultivar-group)]
Length = 316
Score = 83.2 bits (204), Expect = 1e-14
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+G L W V L E F G V ARV+ D ETGRSRG+GFV YS + EA+S+
Sbjct: 237 KLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSS 296
Query: 460 MDGKEIDGRQVRVNMA 413
++G E++GR++RVN+A
Sbjct: 297 LNGTELEGREIRVNLA 312
Score = 59.7 bits (143), Expect = 2e-07
Identities = 33/100 (33%), Positives = 50/100 (50%)
Frame = -3
Query: 706 LVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETG 527
++ G +GG A ++TKL+ G L + D +L + V+ DR TG
Sbjct: 126 VLEGSSGGGEAEAEAAG--ITTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATG 183
Query: 526 RSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANE 407
RSRGF FV S + ++ I +DG GR +RVN A++
Sbjct: 184 RSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADK 223
>ref|NP_179221.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 83.2 bits (204), Expect = 1e-14
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ F+GGL W D+ + F+ FGEV ++++I DRETGRS+GF FV + D D+ + AI
Sbjct: 45 RCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTAIDR 104
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+E+DGR + A R +G R
Sbjct: 105 MNGQELDGRNI---TAQARGSGTR 125
>ref|XP_719050.1| putative nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
ref|XP_718946.1| putative nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 83.2 bits (204), Expect = 1e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
LF+G L W +DD L+ F G V ARVI +R TG+SRG+G+V++ AA++A+ M
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 457 DGKEIDGRQVRVNMANERPAGNR 389
GKEIDGR + ++M+ +P ++
Sbjct: 230 QGKEIDGRPINLDMSTGKPHASK 252
Score = 62.0 bits (149), Expect = 4e-08
Identities = 32/85 (37%), Positives = 47/85 (55%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LFIG L + + L F +G V RV T +T + +GFG+V +S D AK A+
Sbjct: 269 SDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAAL 328
Query: 466 SAMDGKEIDGRQVRVNMANERPAGN 392
AM+G+ I+GR R++ + R N
Sbjct: 329 EAMNGEYIEGRPCRLDFSTPRDNTN 353
>ref|NP_193122.2| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
Length = 87
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M+T++++G L D LREAFS +G V +A V+ DR T RSRGFGFV YS A+ A
Sbjct: 1 MATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAA 60
Query: 469 ISAMDGKEIDGRQVRVNM 416
+S MDGKE++GR+V V +
Sbjct: 61 VSGMDGKELNGRRVSVKL 78
>ref|XP_470338.1| putative RNA binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAR88588.1| putative RNA binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 205
Score = 82.8 bits (203), Expect = 2e-14
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ FIG L W D L++AF FG +TEA+V+ D+ +GRSRGFGFV + + A ++AI
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 460 MDGKEIDGRQVRVNMANERPAG 395
M+G ++DGR + V+ A + G
Sbjct: 68 MNGLDLDGRAITVDKAQPQGPG 89
>ref|XP_452713.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH01564.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 445
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W +DD L+ F G V ARV+ +R T RSRG+G+V++ D A++AI M
Sbjct: 198 IFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYGYVDFEDKSYAEKAIKEM 257
Query: 457 DGKEIDGRQVRVNMANERPAG 395
GKEIDGR + +M+ +PAG
Sbjct: 258 HGKEIDGRPINCDMSTSKPAG 278
Score = 56.6 bits (135), Expect = 1e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D L E F +GE+ R+ T ET + +GFG+V Y + A +A
Sbjct: 296 SDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKAF 355
Query: 466 SAMDGKEIDGRQVRVN 419
+ G+ I+ R VR++
Sbjct: 356 EGLQGEYINNRPVRLD 371
>ref|NP_196239.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gb|AAM65119.1| unknown [Arabidopsis thaliana]
dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
Length = 146
Score = 82.4 bits (202), Expect = 3e-14
Identities = 45/116 (38%), Positives = 73/116 (62%)
Frame = -3
Query: 751 MAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSF 572
MAA ++GG RH V I +S F R +++KLFIGGL + + L EAFS
Sbjct: 1 MAALARIGG--RHLKSVCLINSSAS-CFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKC 57
Query: 571 GEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
G+V EA+++ DR + RS+GFGFV ++ +D A++A+ +G++++GR + V+ A +
Sbjct: 58 GQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAK 113
>gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/81 (48%), Positives = 57/81 (70%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
+T +F+G L W VD+ L+ F S GEV ARV+ DR++ +SRGFG+V ++D +++ +AI
Sbjct: 195 TTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAI 254
Query: 466 SAMDGKEIDGRQVRVNMANER 404
DG EIDGR +RVN A +R
Sbjct: 255 E-KDGSEIDGRAIRVNYATQR 274
Score = 70.5 bits (171), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
L+IG L + V + ++ EAF G+V R+ TDR+TG +GFG+V +S D A A+ AM
Sbjct: 298 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAM 357
Query: 457 DGKEIDGRQVRVNMA 413
+G EI GR +RV+ A
Sbjct: 358 NGAEIAGRAIRVDFA 372
>emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W VDD L + F +G + ARVI D ++GRS+G+G+V++ +AAK A++A
Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324
Query: 457 DGKEIDGRQVRVNMANERPA 398
KEIDGR V +++ N RPA
Sbjct: 325 GTKEIDGRMVNLDLPNPRPA 344
Score = 60.5 bits (145), Expect = 1e-07
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S +F+G L + + L AF G++ R+ TD ++GR +GFG+V +SD D+AK+ +
Sbjct: 365 SDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV 424
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
M+G I GR R++ + R G
Sbjct: 425 E-MNGHFIAGRPCRLDFSTPRTGG 447
>gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 441
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/81 (48%), Positives = 57/81 (70%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
+T +F+G L W VD+ L+ F S GEV ARV+ DR++ +SRGFG+V ++D +++ +AI
Sbjct: 192 TTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAI 251
Query: 466 SAMDGKEIDGRQVRVNMANER 404
DG EIDGR +RVN A +R
Sbjct: 252 E-KDGSEIDGRAIRVNYATQR 271
Score = 70.5 bits (171), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
L+IG L + V + ++ EAF G+V R+ TDR+TG +GFG+V +S D A A+ AM
Sbjct: 295 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAM 354
Query: 457 DGKEIDGRQVRVNMA 413
+G EI GR +RV+ A
Sbjct: 355 NGAEIAGRAIRVDFA 369
>ref|XP_478915.1| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
(japonica cultivar-group)]
dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
(japonica cultivar-group)]
Length = 472
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S KLF+GG+ W D+ +LRE FS FGEVTEA ++ DR TGR+RGFGFV ++D+ A+
Sbjct: 5 SGKLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERV- 63
Query: 466 SAMDGKEIDGRQVRVNMANER 404
MD IDGR V A R
Sbjct: 64 -TMDKHMIDGRMVEAKKAVPR 83
Score = 60.1 bits (144), Expect = 1e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
K+F+GGL V +V+ R F FG +T+ V+ D T R RGFGF+ Y DA +A+
Sbjct: 107 KIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALH- 165
Query: 460 MDGKEIDGRQVRVNMA 413
+ E++G+ V V A
Sbjct: 166 KNFHELNGKMVEVKRA 181
>emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
ref|NP_967340.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 120
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/87 (48%), Positives = 56/87 (64%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M+ KL++G L + VDD L + F+ FG V A+VI DRETGRS+GFGFV SD AA +A
Sbjct: 1 MAKKLYVGNLPYSVDDEALHQHFAQFGAVDSAKVIMDRETGRSKGFGFVEMSDDSAADQA 60
Query: 469 ISAMDGKEIDGRQVRVNMANERPAGNR 389
I +G E+ GR +N++ RP R
Sbjct: 61 IERGNGIELGGRP--INISEARPQAPR 85
>ref|ZP_00661830.1| RNA-binding region RNP-1 (RNA recognition motif) [Prosthecochloris
vibrioformis DSM 265]
gb|EAO14811.1| RNA-binding region RNP-1 (RNA recognition motif) [Prosthecochloris
vibrioformis DSM 265]
Length = 90
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+++G L + V + LR+AFS FG+V A +I D+ +GRS+GFGFV SD DAA+EAI AM
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 457 DGKEIDGRQVRVNMANER 404
K+ GR + VN A R
Sbjct: 63 HNKDFMGRSIMVNEAKPR 80
>emb|CAG58749.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445830.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 82.0 bits (201), Expect = 3e-14
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W +DD L++ F G V ARV+ +R T RSRG+G+V++ D A++A+ M
Sbjct: 178 VFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEKAVKEM 237
Query: 457 DGKEIDGRQVRVNMANERPAGN 392
GKEIDGR + V+M+ +P N
Sbjct: 238 HGKEIDGRPINVDMSTSKPTVN 259
Score = 68.9 bits (167), Expect = 3e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D + E F FGE+ R+ T ET + +GFG+V Y+ D AK+A+
Sbjct: 276 SDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKAL 335
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
A+ G+ ID R VR++ + +P
Sbjct: 336 EALQGEYIDNRPVRLDYSTPKP 357
>ref|ZP_00243386.1| COG0724: RNA-binding proteins (RRM domain) [Rubrivivax gelatinosus
PM1]
Length = 162
Score = 81.6 bits (200), Expect = 4e-14
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M KL++G L + V D L++AF FG VT A+V+ DR+TGRS+GFGFV A+ A
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAA 60
Query: 469 ISAMDGKEIDGRQVRVNMA---NERPAGNR 389
I M+G+ + GR + VN A ERP G R
Sbjct: 61 IEGMNGQSLSGRAIVVNEARPREERPGGFR 90
>gb|AAB61213.1| glycine-rich protein [Oryza sativa]
Length = 197
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 36/122 (29%)
Frame = -3
Query: 661 AARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARV---------------------- 548
AA + + F+GGL W DD L AFS++GE+ E++V
Sbjct: 2 AAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKVRWIPSSLCFFLMRFGGGVRQIW 61
Query: 547 --------------ITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMAN 410
I DRETGRSRGFGFV +S+ A ++AI M+GKE+DGR + VN A
Sbjct: 62 LRKSDYGGGYAVQIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEAQ 121
Query: 409 ER 404
R
Sbjct: 122 SR 123
>ref|XP_476928.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 81.6 bits (200), Expect = 4e-14
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++F+GGL W + L AFS +G+V E +V+ +R+TGRSRGFGFV +S+ A AI
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 460 MDGKEIDGRQVRVNMANER 404
M E+DGR + VN A R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 81.3 bits (199), Expect = 6e-14
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M +KL++G L++ V D L F+++G V A+V+ DR TGRSRGFGFV A+ A
Sbjct: 1 MGSKLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAA 60
Query: 469 ISAMDGKEIDGRQVRVNMAN--ERPAGN 392
I+ ++GKE+DGR + VN A ER G+
Sbjct: 61 IAGLNGKEMDGRNLMVNEARPPERRGGS 88
>gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 81.3 bits (199), Expect = 6e-14
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = -3
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
++ KL++G L WGV D +L++ F+ +G V A+VI DR+TGRS+GFGFV A+
Sbjct: 37 VVGKKLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQA 96
Query: 472 AISAMDGKEIDGRQVRVNMANER 404
AI+ M G+ I+GR + VN A +
Sbjct: 97 AITGMHGQVIEGRPLTVNEARPK 119
>ref|XP_549003.1| PREDICTED: similar to RNA binding motif protein 3 [Canis
familiaris]
Length = 131
Score = 81.3 bits (199), Expect = 6e-14
Identities = 37/83 (44%), Positives = 58/83 (69%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
LF+GGL++ ++ L + FSSFG ++E V+ DRET RSRGF F+ +++ + A +A+ M
Sbjct: 8 LFLGGLNFNTNEQALEDHFSSFGPISEVVVVKDRETQRSRGFCFITFTNPEHASDAMRPM 67
Query: 457 DGKEIDGRQVRVNMANERPAGNR 389
+GK +DGRQ+RV+ A + G R
Sbjct: 68 NGKSLDGRQIRVDHAGKLARGTR 90
>ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 81.3 bits (199), Expect = 6e-14
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M +++G L + + ++R+ F+ +GEV E R+ITDR+TGR RGFGFV + +D A A
Sbjct: 1 MMKSIYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPAD-ADAA 59
Query: 469 ISAMDGKEIDGRQVRVNMANER 404
I A++G E+DGR +R+N A ER
Sbjct: 60 IEALNGTELDGRALRINEAQER 81
>ref|ZP_00512687.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
limicola DSM 245]
gb|EAM42667.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
limicola DSM 245]
Length = 90
Score = 81.3 bits (199), Expect = 6e-14
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG LD+ V + LRE F FGEV+ A VITD+ TGRS+GFGFV ++ A EAIS++
Sbjct: 3 IYIGNLDYNVTESDLRETFGEFGEVSNASVITDKFTGRSKGFGFVEMPNNAEASEAISSL 62
Query: 457 DGKEIDGRQVRVNMANER 404
+ +++GR ++VN A R
Sbjct: 63 NDSDLNGRTIKVNEAKPR 80
>ref|XP_855044.1| PREDICTED: similar to RNA binding motif protein 3 [Canis
familiaris]
Length = 152
Score = 81.3 bits (199), Expect = 6e-14
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KLF+GGL++ ++ L + FSSFG ++E V+ DRET RSRGFGF+ +S+ + A + + A
Sbjct: 40 KLFVGGLNFITNEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFSNPEYASDTMRA 99
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+ V+ + G R
Sbjct: 100 MNGESLDGRQICVDHVGKSARGTR 123
>ref|ZP_00527889.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides DSM 266]
gb|EAM35717.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides DSM 266]
Length = 90
Score = 80.9 bits (198), Expect = 7e-14
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG L + V + LR+AFS FG+V A +ITD+ +GRS+GFGFV+ D A+EAI +M
Sbjct: 3 IYIGNLPYQVTEDDLRDAFSQFGQVDSANIITDKFSGRSKGFGFVDMPHDDEAREAIESM 62
Query: 457 DGKEIDGRQVRVNMA---NERPA 398
+ K++ GR ++VN A ERPA
Sbjct: 63 NDKDLKGRTIKVNEARPREERPA 85
>ref|XP_915256.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 80.9 bits (198), Expect = 7e-14
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KL +GGL++ + L FSSFG ++E V+ DRET RS GFGF+ +++ + A +A+ A
Sbjct: 7 KLVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G+ +DGRQ+RV+ A + G+R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>emb|CAG84877.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_456900.1| hypothetical protein DEHA0A13563g [Debaryomyces hansenii CBS767]
Length = 447
Score = 80.9 bits (198), Expect = 7e-14
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
LF+G L W +DD LR F G V ARVI +R TG+SRG+G+V++ AA++A+
Sbjct: 200 LFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSKSAAEKALQEY 259
Query: 457 DGKEIDGRQVRVNMANERP 401
GKE+DGR + ++M+ +P
Sbjct: 260 QGKELDGRPINLDMSTGKP 278
Score = 62.0 bits (149), Expect = 4e-08
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + + L F +G V R+ T +T + +GFG+V +S D AK A+
Sbjct: 299 SDTLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAAL 358
Query: 466 SAMDGKEIDGRQVRVNMANERPAGN 392
A++G+ +DGR R++ + R N
Sbjct: 359 EALNGEYLDGRACRLDFSTPRDNSN 383
>emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim 198.80]
Length = 177
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
MS++L++G L W + LR F FGEV EA + DRE+GRSRGFGFV +D AK+A
Sbjct: 1 MSSRLYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTL-PADVAKDA 59
Query: 469 ISAMDGKEIDGRQVRVNMANERPAGNR 389
I +G E GR ++VN A+ P G R
Sbjct: 60 IEKTNGAEFMGRNIKVNEAS--PPGER 84
>ref|NP_910645.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
(japonica cultivar-group)]
dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
(japonica cultivar-group)]
Length = 133
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/102 (48%), Positives = 59/102 (57%)
Frame = -3
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VSG T PA A + LF+ GL+ LREAFS FG+V EARVITDR +G
Sbjct: 16 VSGFTPPPPPAARPLADPCNN-LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGY 74
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPA 398
SRGFGFV Y+ + A E I MDGK +DG + A +R A
Sbjct: 75 SRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYAKQREA 116
>gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 80.5 bits (197), Expect = 1e-13
Identities = 44/110 (40%), Positives = 64/110 (58%)
Frame = -3
Query: 718 RHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITD 539
RH AL S + S P + KL++G L +GV D +LR F +G V A+VI D
Sbjct: 40 RHEALGS-VPSDSGPLGPARCETVGKKLYVGNLGYGVTDEQLRGMFGPYGSVQTAQVIMD 98
Query: 538 RETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
R+TGRS+GFGFV + A+ AI+ M+G+ +GR + VN A + + +R
Sbjct: 99 RDTGRSKGFGFVEMNSDQEAQAAIAGMNGQMSEGRALTVNEAKPKESRSR 148
>gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 80.5 bits (197), Expect = 1e-13
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = -3
Query: 628 GGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 449
GGL + + L EAFS +G + + VI DRET RSRGFGFV + + + AK+A++AM+GK
Sbjct: 3 GGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGK 62
Query: 448 EIDGRQVRVNMANE 407
++DGR +RV+ A +
Sbjct: 63 QVDGRMIRVDEAGK 76
>gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
chlorochromatii CaD3]
ref|YP_379849.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
chlorochromatii CaD3]
Length = 90
Score = 80.5 bits (197), Expect = 1e-13
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG L + V + LR+AF FG+V A +ITD+ +GRS+GFGFV+ + A+EAI AM
Sbjct: 3 IYIGNLAYSVTENDLRDAFGQFGQVESASIITDKFSGRSKGFGFVDMPNDSEAREAIGAM 62
Query: 457 DGKEIDGRQVRVNMA---NERPA 398
+ KE++GR ++VN A ERPA
Sbjct: 63 NEKELNGRPIKVNEAKPREERPA 85
>ref|YP_431499.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 80.5 bits (197), Expect = 1e-13
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+++G L +GV + +LREAFSSFGEVT A +I DR TG+S+GF FV S++ A AI +
Sbjct: 3 IYVGNLAYGVTEEELREAFSSFGEVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAIKGL 62
Query: 457 DGKEIDGRQVRVNMA---NERPA 398
+ + GR ++VN A ERPA
Sbjct: 63 NDTALKGRNIKVNQAKPREERPA 85
>ref|XP_385593.1| conserved hypothetical protein [Gibberella zeae PH-1]
gb|EAA73679.1| conserved hypothetical protein [Gibberella zeae PH-1]
Length = 473
Score = 80.5 bits (197), Expect = 1e-13
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L V+D L +AFS+FG V+EARV+ D +TGRSRG+GFV + D A++A+S+M
Sbjct: 174 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 233
Query: 457 DGKEIDGRQVRVNMANER 404
DG+ + R +R N AN++
Sbjct: 234 DGEWLGSRAIRCNWANQK 251
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = -3
Query: 712 SALVSGITGGSSPAVFNAARLMSTK--LFIGGLDWGVDDVKLREAFSSFGEVTEARVITD 539
SA GI +S F A K L+IGGLD V + LR+ F + G V ++I D
Sbjct: 57 SADNGGIMSPTSAGGFRRAAPEPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD 116
Query: 538 RETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
+ R +GFV Y D AA+ A+ ++G+ + ++RVN A + N+
Sbjct: 117 KNA-RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTNK 165
Score = 35.4 bits (80), Expect = 3.5
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
T +++G L + F +FG V E+R DR GF F+ + A AI
Sbjct: 298 TTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADR------GFAFIKMDSHENAAMAIC 351
Query: 463 AMDGKEIDGRQVRVNMANER 404
M+G ++GR ++ + ++
Sbjct: 352 QMNGYNVNGRPLKCSWGKDK 371
>ref|ZP_00533321.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides BS1]
gb|EAM62312.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
phaeobacteroides BS1]
Length = 104
Score = 80.1 bits (196), Expect = 1e-13
Identities = 38/83 (45%), Positives = 60/83 (72%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L + + + +LR F SFGEVT AR+ITD+ +G+S+GFGFV+ +++ A+EAI +
Sbjct: 3 IFVGSLPFRLSEDELRGEFESFGEVTSARIITDKFSGKSKGFGFVDMPNANEAEEAIENL 62
Query: 457 DGKEIDGRQVRVNMANERPAGNR 389
+GKE+ GR + VN A E+ +R
Sbjct: 63 NGKELMGRPIVVNEAREKRDDDR 85
>ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
Length = 524
Score = 80.1 bits (196), Expect = 1e-13
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L W V + L + F FGE++ AR++T+R+TGRSRGFG+V ++++ A +A
Sbjct: 276 SANLFVGNLSWNVTEEWLHQEFEQFGELS-ARIMTERDTGRSRGFGYVEFTNAADAAKAY 334
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
AM EIDGR++ ++ A RPA
Sbjct: 335 EAMKEHEIDGRKINLDYATGRPA 357
Score = 68.6 bits (166), Expect = 4e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + ++ + E F G V R+ TD E+GR +GFG+V YS D A++A
Sbjct: 383 SDTLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAY 442
Query: 466 SAMDGKEIDGRQVRVNMANER 404
+ + G EIDGR +R++ + R
Sbjct: 443 NELQGAEIDGRPIRLDFSTPR 463
>ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
gb|EAM53488.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
Length = 132
Score = 80.1 bits (196), Expect = 1e-13
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G LD+ + +R F +G+V AR++TDRETGRSRGF FV + A +AISA+
Sbjct: 4 IFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISAL 63
Query: 457 DGKEIDGRQVRVNMANERP 401
+G +DGR + VN A +P
Sbjct: 64 NGYTLDGRALNVNEARPKP 82
>ref|ZP_00310979.1| COG0724: RNA-binding proteins (RRM domain) [Cytophaga hutchinsonii]
Length = 143
Score = 79.7 bits (195), Expect = 2e-13
Identities = 35/83 (42%), Positives = 58/83 (69%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L + +++ +LRE F +GEV+ ++I+D+ TGRS+GFGFV D AA++AI +
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 457 DGKEIDGRQVRVNMANERPAGNR 389
+G E++GR + VN + E+ G R
Sbjct: 63 NGAEVNGRTIVVNKSEEKKDGPR 85
>gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 79.7 bits (195), Expect = 2e-13
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 634 FIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNY-SDSDAAKEAISAM 458
++G L W VD+ +L + S G+V ARV++DRET RSRGFGFV S+++ + A+
Sbjct: 210 YVGNLPWDVDNDRLEQLSSEHGKVLSARVVSDRETERSRGFGFVTMASETEMNDATLGAL 269
Query: 457 DGKEIDGRQVRVNMANERP 401
DG+ ++GR +RVN+A ERP
Sbjct: 270 DGESLEGRPIRVNVAEERP 288
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
KL++G L + VD KL F + G V A VI +RET RSRGFGFV S + A +A+
Sbjct: 113 KLYVGNLPFDVDSEKLANMFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEM 172
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
E++GR + VN A P G+R
Sbjct: 173 FHSYELNGRLLTVNKA--APRGSR 194
>ref|ZP_00522665.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
gb|EAM58261.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G LD+ + +R F +G V ++TDR+TGRSRGF FV +D+ A AI+A+
Sbjct: 4 IFVGNLDFAATESSIRSLFEPYGSVDRVNLVTDRDTGRSRGFAFVEMTDAAEADRAIAAL 63
Query: 457 DGKEIDGRQVRVNMANERPAG 395
+G E+DGR + +N A +P G
Sbjct: 64 NGHELDGRALNINEARPKPQG 84
>ref|ZP_01073434.1| RNA-binding protein [Campylobacter fetus subsp. fetus 82-40]
gb|EAQ61627.1| RNA-binding protein [Campylobacter fetus subsp. fetus 82-40]
Length = 70
Score = 79.7 bits (195), Expect = 2e-13
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = -3
Query: 598 KLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVN 419
+LRE FSSFGEVT A+++ D+ET RS+GFGFV S + AK+AI +GKE+ GR +RVN
Sbjct: 5 ELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGTNGKEVGGRALRVN 64
Query: 418 MANER 404
A R
Sbjct: 65 EARPR 69
>ref|XP_962723.1| hypothetical protein [Neurospora crassa N150]
ref|XP_328580.1| hypothetical protein [Neurospora crassa]
gb|EAA33487.1| hypothetical protein [Neurospora crassa]
Length = 490
Score = 79.7 bits (195), Expect = 2e-13
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L V+D L +AFS+FG V+EARV+ D +TGRSRG+GFV + D A++A+S+M
Sbjct: 193 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 252
Query: 457 DGKEIDGRQVRVNMANER 404
DG+ + R +R N AN++
Sbjct: 253 DGEWLGSRAIRCNWANQK 270
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Frame = -3
Query: 748 AAFNKLGGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFG 569
A + +GG S ++S + G+ A L++GGLD V + LR+ F + G
Sbjct: 56 AITSPMGGNGDTSGIMSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTG 115
Query: 568 EVTEARVITDRETG-------RSRGF--GFVNYSDSDAAKEAISAMDGKEIDGRQVRVNM 416
V ++I D+ G R +G+ GFV Y D AA+ A+ ++G+ + ++RVN
Sbjct: 116 HVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNW 175
Query: 415 ANERPAGNR 389
A + N+
Sbjct: 176 AYQSNNQNK 184
Score = 35.8 bits (81), Expect = 2.7
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = -3
Query: 643 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 464
T ++G L L F +FG V E+R DR GF F+ + A AI
Sbjct: 317 TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADR------GFAFIKMDTHENAAMAIC 370
Query: 463 AMDGKEIDGRQVRVNMANER 404
++G +++GR ++ + ++
Sbjct: 371 QLNGYQVNGRPLKCSWGKDK 390
>dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
dbj|BAA06012.1| RNA binding protein, RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 79.7 bits (195), Expect = 2e-13
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = -3
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
+ FIG L W D L++AF FG + +A+V+ D+ +GRSRGFGFV + + A ++AI A
Sbjct: 7 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEA 66
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
M+G ++DGR + V+ A R
Sbjct: 67 MNGVDLDGRDITVDKAQPDKGSGR 90
>gb|ABB37594.1| RNA-binding region RNP-1 [Desulfovibrio desulfuricans G20]
ref|YP_387289.1| RNA-binding region RNP-1 [Desulfovibrio desulfuricans G20]
Length = 87
Score = 79.3 bits (194), Expect = 2e-13
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = -3
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
M+ +++G L W D L F+ FG+VT ARVI+DRETGRSRGFGFV D++ A +A
Sbjct: 1 MTKNIYVGNLSWECTDQDLHALFADFGDVTSARVISDRETGRSRGFGFVE-MDANGAAQA 59
Query: 469 ISAMDGKEIDGRQVRVNMANER 404
I +++ GR ++VN A R
Sbjct: 60 IDSLNASSFQGRNLKVNEAQPR 81
>ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/98 (37%), Positives = 61/98 (62%)
Frame = -3
Query: 697 GITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSR 518
G ++ A A + ++++G L W VD+ L+ FGEVT ARV DR +G+SR
Sbjct: 195 GTAAAAAAAPAELAEGETNQIWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSR 254
Query: 517 GFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
GFG+V+++ + AAK+A GKE+DGR +R++++ +
Sbjct: 255 GFGYVDFATAAAAKKAFDEGQGKEVDGRAIRIDLSTPK 292
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+ LFIG L + V + + AFS GEV+ R+ D ++GR +GFG+V ++ ++A+ AI
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 466 SAMDGKEIDGRQVRVNMANER 404
AM G+E+ GR +R++ + R
Sbjct: 371 DAMTGQELAGRPLRLDFSTPR 391
>gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
ref|NP_985654.1| AFR107Wp [Eremothecium gossypii]
Length = 396
Score = 79.0 bits (193), Expect = 3e-13
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+F+G L W VDD L+ F G V ARVI +R T +SRG+G+V++ D A++A+ M
Sbjct: 169 IFVGRLSWSVDDEWLKTEFDHIGGVVGARVIYERGTDKSRGYGYVDFEDVSYAEKAVKEM 228
Query: 457 DGKEIDGRQVRVNMANERPA 398
GKEIDGR + +M+ +PA
Sbjct: 229 HGKEIDGRAINCDMSTSKPA 248
Score = 64.3 bits (155), Expect = 7e-09
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D L E FS G V R+ T E+ + +GFG+V Y + A+ A+
Sbjct: 267 SDTLFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYGSVEEAQAAL 326
Query: 466 SAMDGKEIDGRQVRVNMANERP 401
A+ G+ ID R VR++ ++ RP
Sbjct: 327 DALQGEYIDNRPVRIDFSSPRP 348
>emb|CAH08430.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
dbj|BAD49469.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
ref|YP_100003.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
ref|YP_212351.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 122
Score = 79.0 bits (193), Expect = 3e-13
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+FI G+ + + + L E F FGEV A+++ DRETGRS+GFGFV + + AI+A+
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 457 DGKEIDGRQVRVNMANERPAGNR 389
+ KEIDG+ + V++A R G R
Sbjct: 63 NEKEIDGKTLAVSVARPREEGPR 85
>gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]
ref|NP_661038.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 79.0 bits (193), Expect = 3e-13
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
++IG L + V D LR+ FS FG+V A +ITD+ +GRS+GFGFV+ + A+EAI AM
Sbjct: 3 IYIGNLPYSVTDEDLRDKFSEFGQVHSANIITDKFSGRSKGFGFVDMPNESEAREAIDAM 62
Query: 457 DGKEIDGRQVRVNMANER 404
+ K+ GR ++VN A R
Sbjct: 63 NDKDFKGRTIKVNEARPR 80
>ref|NP_181287.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 142
Score = 79.0 bits (193), Expect = 3e-13
Identities = 41/99 (41%), Positives = 64/99 (64%)
Frame = -3
Query: 700 SGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRS 521
S + S V + L S +LF+ GL + KL++AF+SFG++ +ARVITDR++GRS
Sbjct: 15 SSLLSSPSLCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRS 74
Query: 520 RGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 404
+GFGFV Y+ + A++A + M+ K +DG + V+ A R
Sbjct: 75 KGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPR 113
>gb|ABB37976.1| RNA-binding region RNP-1 [Desulfovibrio desulfuricans G20]
ref|YP_387671.1| RNA-binding region RNP-1 [Desulfovibrio desulfuricans G20]
Length = 114
Score = 78.6 bits (192), Expect = 4e-13
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
+++G L + + + LR AF FG V + R+ITD +TGRS+GFGFV ++ A AI A+
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 457 DGKEIDGRQVRVNMANERP 401
+G+E+ GR + VN A RP
Sbjct: 63 NGREMGGRSITVNEARPRP 81
>gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S L++G L WGVDD L E F S + ARV++D+ETGRSRGFG+V++ ++AA++A
Sbjct: 220 SATLWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQKAY 279
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
G + GR +R++ A++ A
Sbjct: 280 DEKSGAFLQGRDLRLDFASKPSA 302
Score = 66.6 bits (161), Expect = 1e-09
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S LF+G L + D+ + F+ +V R+ TD+E+GR +GF +V +S D AK+
Sbjct: 325 SDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVF 384
Query: 466 SAMDGKEIDGRQVRVNMANER 404
A++G ++DGR VR++ A R
Sbjct: 385 EALNGGDLDGRPVRLDYAKPR 405
>emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
sp|Q99069|GRP1_SORBI Glycine-rich RNA-binding protein 1
Length = 142
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = -3
Query: 595 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNM 416
L AFS++GEV E+++I DRET RSRGFGFV +S +A + AI M+GKE+DGR + VN
Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62
Query: 415 ANER 404
A R
Sbjct: 63 AQSR 66
>emb|CAG60192.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_447259.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = -3
Query: 637 LFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAM 458
LF+G L+ VDD L F F +A V+ D +TGRSRG+GFV++S+ + A++A+ AM
Sbjct: 148 LFVGDLNVDVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAM 207
Query: 457 DGKEIDGRQVRVNMANER 404
GK++ GRQ+R+N A +R
Sbjct: 208 QGKDLSGRQIRINWATKR 225
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,692,766,626
Number of Sequences: 3454138
Number of extensions: 30850121
Number of successful extensions: 104319
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 96313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102934
length of database: 1,185,965,366
effective HSP length: 130
effective length of database: 736,927,426
effective search space used: 146648557774
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)