BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.8
(708 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_919108.1| unknown protein [Oryza sativa (japonica cu... 147 5e-34
emb|CAA10129.1| hypothetical protein [Cicer arietinum] 142 9e-33
ref|NP_565547.1| unknown protein [Arabidopsis thaliana] >gi... 135 2e-30
pdb|1WVK|A Chain A, Nmr Solution Structure Of The Partially... 133 7e-30
ref|XP_643685.1| hypothetical protein DDB0202579 [Dictyoste... 76 1e-12
ref|XP_468864.1| expressed protein, having alternate splici... 74 7e-12
ref|XP_468863.1| expressed protein, having alternate splici... 72 1e-11
ref|XP_666320.1| hypothetical protein Chro.60358 [Cryptospo... 67 8e-10
ref|XP_965005.1| hypothetical protein [Neurospora crassa N1... 67 8e-10
ref|XP_381070.1| hypothetical protein FG00894.1 [Gibberella... 66 1e-09
gb|AAW41628.1| hypothetical protein CNB04380 [Cryptococcus ... 65 2e-09
ref|XP_680886.1| hypothetical protein AN7617.2 [Aspergillus... 64 5e-09
emb|CAD52359.1| hypothetical protein, conserved [Plasmodium... 63 9e-09
ref|XP_758879.1| hypothetical protein UM02732.1 [Ustilago m... 60 6e-08
ref|XP_739812.1| hypothetical protein [Plasmodium chabaudi ... 59 2e-07
ref|XP_672987.1| hypothetical protein [Plasmodium berghei s... 59 2e-07
ref|XP_625681.1| hypothetical protein cgd4_790 [Cryptospori... 55 2e-06
ref|XP_665481.1| hypothetical protein Chro.40098 [Cryptospo... 55 3e-06
ref|XP_729592.1| hypothetical protein PY01790 [Plasmodium y... 49 2e-04
ref|XP_736084.1| hypothetical protein PC100496.00.0 [Plasmo... 47 7e-04
emb|CAJ02570.1| hypothetical protein, unknown function [Lei... 44 0.007
ref|XP_853728.1| PREDICTED: similar to synaptopodin 2 [Cani... 35 2.6
emb|CAE68384.1| Hypothetical protein CBG14140 [Caenorhabdit... 34 4.4
ref|XP_856525.1| PREDICTED: similar to Ig lambda chain C re... 34 4.4
gb|AAM49770.1| HDT3 [Arabidopsis thaliana] >gi|22655422|gb|... 34 5.7
ref|NP_195994.2| HD2C (HISTONE DEACETYLASE 2C); nucleic aci... 34 5.7
emb|CAB82939.1| histone deacetylase-like protein [Arabidops... 34 5.7
emb|CAJ09165.1| streptococcal hemagglutinin-like protein [L... 34 5.7
ref|XP_528662.1| PREDICTED: similar to Immunoglobulin lambd... 34 5.7
gb|AAX30290.1| SJCHGC02770 protein [Schistosoma japonicum] 33 7.5
ref|XP_849350.1| PREDICTED: similar to Ig lambda chain C re... 33 7.5
ref|XP_850308.1| PREDICTED: similar to Immunoglobulin lambd... 33 9.8
ref|XP_849367.1| PREDICTED: similar to Immunoglobulin lambd... 33 9.8
emb|CAG12588.1| unnamed protein product [Tetraodon nigrovir... 33 9.8
ref|XP_543600.2| PREDICTED: similar to Immunoglobulin lambd... 33 9.8
ref|XP_855821.1| PREDICTED: similar to Immunoglobulin lambd... 33 9.8
gb|AAH50920.2| Dentatorubral pallidoluysian atrophy [Mus mu... 33 9.8
dbj|BAA13450.1| DRPLA protein [Mus musculus] 33 9.8
ref|XP_849383.1| PREDICTED: similar to Immunoglobulin lambd... 33 9.8
>ref|NP_919108.1| unknown protein [Oryza sativa (japonica cultivar-group)]
dbj|BAC16171.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 77
Score = 147 bits (370), Expect = 5e-34
Identities = 65/77 (84%), Positives = 73/77 (94%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAE 384
MGGGNGQKSKMARERN+EKNKGAKGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EHAE
Sbjct: 1 MGGGNGQKSKMARERNMEKNKGAKGSQLEANKKAMNIQCKICMQTFICTTSETKCKEHAE 60
Query: 383 AKHPKTDVYQCFPHLKK 333
AKHPK+D+ CFPHLKK
Sbjct: 61 AKHPKSDLTACFPHLKK 77
>emb|CAA10129.1| hypothetical protein [Cicer arietinum]
Length = 78
Score = 142 bits (359), Expect = 9e-33
Identities = 68/78 (87%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA-KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHA 387
MGGGNGQK+KMARERNLEK K A KGSQLETNKKAMSIQCKVCMQTF+CTT+EVKCREHA
Sbjct: 1 MGGGNGQKAKMARERNLEKQKNAGKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCREHA 60
Query: 386 EAKHPKTDVYQCFPHLKK 333
EAKHPK+DV CFPHL K
Sbjct: 61 EAKHPKSDVLVCFPHLNK 78
>ref|NP_565547.1| unknown protein [Arabidopsis thaliana]
gb|AAN28739.1| At2g23090/F21P24.15 [Arabidopsis thaliana]
gb|AAC17825.1| Expressed protein [Arabidopsis thaliana]
gb|AAL08233.1| At2g23090/F21P24.15 [Arabidopsis thaliana]
gb|AAK96535.1| At2g23090/F21P24.15 [Arabidopsis thaliana]
gb|AAM62542.1| unknown [Arabidopsis thaliana]
Length = 78
Score = 135 bits (339), Expect = 2e-30
Identities = 65/78 (83%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA-KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHA 387
MGGGN QKS MAR +NLEK K A KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHA
Sbjct: 1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60
Query: 386 EAKHPKTDVYQCFPHLKK 333
EAKHPK DV CFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78
>pdb|1WVK|A Chain A, Nmr Solution Structure Of The Partially Disordered Protein
At2g23090 From Arabidopsis Thaliana
Length = 86
Score = 133 bits (334), Expect = 7e-30
Identities = 64/77 (83%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = -2
Query: 560 GGGNGQKSKMARERNLEKNKGA-KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAE 384
GGGN QKS MAR +NLEK K A KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAE
Sbjct: 10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAE 69
Query: 383 AKHPKTDVYQCFPHLKK 333
AKHPK DV CFPHLKK
Sbjct: 70 AKHPKADVVACFPHLKK 86
>ref|XP_643685.1| hypothetical protein DDB0202579 [Dictyostelium discoideum]
gb|EAL69749.1| hypothetical protein DDB0202579 [Dictyostelium discoideum]
Length = 80
Score = 75.9 bits (185), Expect = 1e-12
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGAKG--SQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 390
M GNG K++ RERNL++N+GA SQL+TN+ A + C +C +F+CT E + R H
Sbjct: 1 MPSGNGAKAQQKRERNLKRNEGASSAKSQLKTNEAAKTTICNICRASFLCTAKETELRIH 60
Query: 389 AEAKHPKTDVYQCFP 345
++ KHPK +CFP
Sbjct: 61 SDNKHPKNKFEECFP 75
>ref|XP_468864.1| expressed protein, having alternate splicing products [Oryza sativa
(japonica cultivar-group)]
gb|AAR89013.1| expressed protein, having alternate splicing products [Oryza sativa
(japonica cultivar-group)]
gb|AAO23088.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 42
Score = 73.6 bits (179), Expect = 7e-12
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVC 438
MGGGNGQKS+MARERN+EK KGAKGSQLETNKKAM+IQ C
Sbjct: 1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQVGSC 42
>ref|XP_468863.1| expressed protein, having alternate splicing products [Oryza sativa
(japonica cultivar-group)]
gb|AAR89012.1| expressed protein, having alternate splicing products [Oryza sativa
(japonica cultivar-group)]
Length = 48
Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKV 441
MGGGNGQKS+MARERN+EK KGAKGSQLETNKKAM+IQ V
Sbjct: 1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQVLV 41
>ref|XP_666320.1| hypothetical protein Chro.60358 [Cryptosporidium hominis TU502]
gb|EAL36090.1| hypothetical protein Chro.60358 [Cryptosporidium hominis]
Length = 78
Score = 66.6 bits (161), Expect = 8e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = -2
Query: 557 GGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAK 378
GGN K RER + SQL+ N +AMS++C++C+Q FM T ++H EAK
Sbjct: 4 GGNACKRNQCRERKVANGAKESKSQLKVNAEAMSLKCQICLQPFMKVQTGPLLKQHWEAK 63
Query: 377 HPKTDVYQCFPHLK 336
HPK +CFP ++
Sbjct: 64 HPKKTFQECFPGIE 77
>ref|XP_965005.1| hypothetical protein [Neurospora crassa N150]
ref|XP_331801.1| predicted protein [Neurospora crassa]
gb|EAA35769.1| predicted protein [Neurospora crassa]
Length = 80
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAE 384
MGGGNG K+ RERN + SQL+TN AM+I C+ C TF+ T+ EHA+
Sbjct: 1 MGGGNGAKAAQKRERNAKNAAAGPKSQLKTNAAAMNIICQTCRATFLSTSRAKALDEHAQ 60
Query: 383 AKHPKTDVYQCFP 345
KH KT + CFP
Sbjct: 61 NKHNKT-LADCFP 72
>ref|XP_381070.1| hypothetical protein FG00894.1 [Gibberella zeae PH-1]
gb|EAA67869.1| hypothetical protein FG00894.1 [Gibberella zeae PH-1]
Length = 73
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = -2
Query: 554 GNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
GNG K++ RER K+K SQL+ N+KA IQC++C TF+ TT +EHAE KH
Sbjct: 2 GNGAKAQQKRER-AAKDKNTAKSQLKVNEKACDIQCQICKSTFLKTTKAPALKEHAENKH 60
Query: 374 PKTDVYQCFP 345
KT + CFP
Sbjct: 61 SKT-IADCFP 69
>gb|AAW41628.1| hypothetical protein CNB04380 [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_568935.1| hypothetical protein CNB04380 [Cryptococcus neoformans var.
neoformans JEC21]
gb|EAL22688.1| hypothetical protein CNBB1370 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 77
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = -2
Query: 554 GNGQKSKMARERNLEKNKGAKG----SQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHA 387
GNG K++ R+RN KGA G SQL++N AM+IQC C F T+ ++ ++H
Sbjct: 2 GNGAKAQAKRDRN---TKGAAGKGDQSQLKSNAAAMTIQCITCKAVFQGTSKQLVLQQHV 58
Query: 386 EAKHPKTDVYQCFP 345
++KHPK+D+ CFP
Sbjct: 59 DSKHPKSDIKTCFP 72
>ref|XP_680886.1| hypothetical protein AN7617.2 [Aspergillus nidulans FGSC A4]
gb|EAA61803.1| hypothetical protein AN7617.2 [Aspergillus nidulans FGSC A4]
Length = 78
Score = 63.9 bits (154), Expect = 5e-09
Identities = 34/70 (48%), Positives = 40/70 (57%)
Frame = -2
Query: 554 GNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
GNG K+ RERN + K SQL+TN+ A IQC VC TF+ TT EHA KH
Sbjct: 2 GNGAKAAFKRERNAKDTKSGGKSQLKTNEAAKDIQCVVCRATFLKTTRGPALTEHAANKH 61
Query: 374 PKTDVYQCFP 345
KT + CFP
Sbjct: 62 NKT-LQDCFP 70
>emb|CAD52359.1| hypothetical protein, conserved [Plasmodium falciparum 3D7]
ref|NP_705123.1| hypothetical protein [Plasmodium falciparum 3D7]
Length = 78
Score = 63.2 bits (152), Expect = 9e-09
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = -2
Query: 557 GGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAK 378
G N K ARER + KG K SQL+ NK+A+++ CKVC FM T + + EHAE K
Sbjct: 4 GSNACKRNQARERKNVEVKGGK-SQLKANKEALNVTCKVCYTVFMQTQSISQLAEHAENK 62
Query: 377 HPKTDVYQCFP 345
H K DV +CFP
Sbjct: 63 HNK-DVKECFP 72
>ref|XP_758879.1| hypothetical protein UM02732.1 [Ustilago maydis 521]
gb|EAK83630.1| hypothetical protein UM02732.1 [Ustilago maydis 521]
Length = 74
Score = 60.5 bits (145), Expect = 6e-08
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = -2
Query: 554 GNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
GNG K++ RERN + G SQ +TN+ A ++ C C QTF+ T E +HA +H
Sbjct: 2 GNGAKAQQKRERNAKAAGGEAKSQKKTNEAARNVMCMTCRQTFLLTVREPALIQHASDRH 61
Query: 374 PKTDVYQCFPHLKK 333
KT + +CFP+ K
Sbjct: 62 NKT-LAECFPNHAK 74
>ref|XP_739812.1| hypothetical protein [Plasmodium chabaudi chabaudi]
emb|CAH82357.1| conserved hypothetical protein [Plasmodium chabaudi]
Length = 75
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -2
Query: 557 GGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAK 378
G N K ARER + KG K SQ++ N++A+++ CKVC FM T + + EHA+ +
Sbjct: 4 GSNACKRNQARERKTVEVKGGK-SQIKANQEALNVICKVCYTAFMKTQSISQLAEHAQNR 62
Query: 377 HPKTDVYQCFP 345
H K DV +CFP
Sbjct: 63 HGK-DVKECFP 72
>ref|XP_672987.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH99820.1| conserved hypothetical protein [Plasmodium berghei]
Length = 75
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -2
Query: 557 GGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAK 378
G N K ARER + KG K SQ++ N++A+++ CKVC FM T + + EHA+ +
Sbjct: 4 GSNACKRNQARERKTVEVKGGK-SQIKANQEALNVICKVCYTAFMKTQSISQLAEHAQNR 62
Query: 377 HPKTDVYQCFP 345
H K DV +CFP
Sbjct: 63 HRK-DVKECFP 72
>ref|XP_625681.1| hypothetical protein cgd4_790 [Cryptosporidium parvum Iowa II]
gb|EAK87721.1| small conserved protein [Cryptosporidium parvum]
Length = 82
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Frame = -2
Query: 545 QKSKMAR--ERNLEKNKGAKG----------SQLETNKKAMSIQCKVCMQTFMCTTTEVK 402
++ KM+R +R++++ + K S +E +K +SI C +C QTFMCT
Sbjct: 2 EEIKMSRGNQRDIDRQRAQKRQDRTAPKTGKSIIEQKEKILSIVCNICKQTFMCTANRQT 61
Query: 401 CREHAEAKHPKTDVYQCFPH 342
H + KHPK + QCFP+
Sbjct: 62 LEVHVDTKHPKLEFSQCFPN 81
>ref|XP_665481.1| hypothetical protein Chro.40098 [Cryptosporidium hominis TU502]
gb|EAL35250.1| hypothetical protein Chro.40098 [Cryptosporidium hominis]
Length = 77
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -2
Query: 488 SQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPH 342
S +E +K +SI C +C QTFMCT H + KHPK + QCFP+
Sbjct: 28 SIIEQKEKILSIVCNICKQTFMCTANRQTLEVHVDTKHPKLEFSQCFPN 76
>ref|XP_729592.1| hypothetical protein PY01790 [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA21157.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 71
Score = 48.5 bits (114), Expect = 2e-04
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 548 GQKSKMARERNLEKNKGAK-GSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHP 372
G + + R R+ ++N+ AK S ++ K +++ CK+C TFMCT + +EH E KH
Sbjct: 4 GNQRDVDRIRSSKRNEKAKPNSTVKDASKNLNVICKLCRHTFMCTVNQSILKEHHEKKHS 63
Query: 371 KTDVYQCF 348
K CF
Sbjct: 64 KHAYEDCF 71
>ref|XP_736084.1| hypothetical protein PC100496.00.0 [Plasmodium chabaudi chabaudi]
emb|CAH74681.1| hypothetical protein PC100496.00.0 [Plasmodium chabaudi]
Length = 71
Score = 47.0 bits (110), Expect = 7e-04
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 548 GQKSKMARERNLEKNKGAK-GSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHP 372
G + + R R+ ++N+ K S ++ K +++ CK+C TFMCT + +EH E KH
Sbjct: 4 GNQRDVDRIRSSKRNEKVKPNSTVKDASKNLNVICKLCRHTFMCTVNQSILKEHHEKKHS 63
Query: 371 KTDVYQCF 348
K CF
Sbjct: 64 KHAYEDCF 71
>emb|CAJ02570.1| hypothetical protein, unknown function [Leishmania major]
Length = 83
Score = 43.5 bits (101), Expect = 0.007
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA--KGSQLETNKKAMS---IQCKVCMQTFMCTTTEVKC 399
M GNG ++ RER ++K +GA K + + K S IQCKVC+Q F T +
Sbjct: 1 MPSGNGCRANQRREREMKKTQGAGVKHTSEDMKKHEQSKNAIQCKVCLQGFPRTVRRPEL 60
Query: 398 REHAEAKHPKTDVYQCF 348
+H E KH K + +CF
Sbjct: 61 EQHFE-KHAK--IGKCF 74
>ref|XP_853728.1| PREDICTED: similar to synaptopodin 2 [Canis familiaris]
Length = 1318
Score = 35.0 bits (79), Expect = 2.6
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 700 TDPPERSGLPFPR--SFP*TTNLTRSGAGRPPGEVRVPAVDRRRIHPPWAVATARSPRWP 527
T P R+ PFP S P T AG PP ++ P PP + P WP
Sbjct: 641 TGPRNRTAQPFPGPGSQPATPLSPPRSAGSPPADLPAPPPYSAVTPPPEGFCAPQPPPWP 700
Query: 526 ASATW 512
A W
Sbjct: 701 QPAAW 705
>emb|CAE68384.1| Hypothetical protein CBG14140 [Caenorhabditis briggsae]
Length = 76
Score = 34.3 bits (77), Expect = 4.4
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = -2
Query: 548 GQKSKMARERNLEKNKGAK---GSQLETNK-KAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
G + ++++RN EK AK GS +T K++ +C VCM T ++H E+
Sbjct: 4 GHQKALSQQRNAEKTAKAKKAVGSDQKTAAMKSLHHKCTVCMSMMPDPKTY---KQHFES 60
Query: 380 KHPKT 366
KHPK+
Sbjct: 61 KHPKS 65
>ref|XP_856525.1| PREDICTED: similar to Ig lambda chain C regions isoform 19 [Canis
familiaris]
Length = 126
Score = 34.3 bits (77), Expect = 4.4
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Frame = -1
Query: 399 PGARRGQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHS 247
P GQ V + PPS E G N AT L++ P GV P +GV +
Sbjct: 16 PSIPTGQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPVTQGVET 75
Query: 246 VLSSRQS 226
S+QS
Sbjct: 76 TKPSKQS 82
>gb|AAM49770.1| HDT3 [Arabidopsis thaliana]
gb|AAM98303.1| At5g03740/F17C15_160 [Arabidopsis thaliana]
gb|AAK49605.1| AT5g03740/F17C15_160 [Arabidopsis thaliana]
gb|AAF70197.1| putative histone deacetylase HD2c [Arabidopsis thaliana]
dbj|BAB08599.1| histone deacetylase HD2c [Arabidopsis thaliana]
sp|Q9LZR5|HD2C_ARATH Histone deacetylase 2c (HD-tuins protein 3)
Length = 294
Score = 33.9 bits (76), Expect = 5.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 539 SKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
SK A + + + G Q +T K A + CK C +TF T+E+ + H +AKH
Sbjct: 239 SKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF---TSEMGLQSHTKAKH 290
>ref|NP_195994.2| HD2C (HISTONE DEACETYLASE 2C); nucleic acid binding / zinc ion
binding [Arabidopsis thaliana]
Length = 287
Score = 33.9 bits (76), Expect = 5.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 539 SKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
SK A + + + G Q +T K A + CK C +TF T+E+ + H +AKH
Sbjct: 232 SKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF---TSEMGLQSHTKAKH 283
>emb|CAB82939.1| histone deacetylase-like protein [Arabidopsis thaliana]
Length = 296
Score = 33.9 bits (76), Expect = 5.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 539 SKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKH 375
SK A + + + G Q +T K A + CK C +TF T+E+ + H +AKH
Sbjct: 241 SKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF---TSEMGLQSHTKAKH 292
>emb|CAJ09165.1| streptococcal hemagglutinin-like protein [Leishmania major]
Length = 1288
Score = 33.9 bits (76), Expect = 5.7
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 13/72 (18%)
Frame = -1
Query: 408 SEVPGARRGQASQDRR----VPVLPPSEEVK---------GLNLATSAGLVTTIGPGGVP 268
S PG+ + D VPVLPP + GL A SA L T G GG P
Sbjct: 807 SSAPGSTSADNNDDPESNACVPVLPPEAPARASPVALPIPGLTAADSASLST--GGGGAP 864
Query: 267 CVEGVHSVLSSR 232
C + S +S R
Sbjct: 865 CAKAASSTISVR 876
>ref|XP_528662.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Pan troglodytes]
Length = 671
Score = 33.9 bits (76), Expect = 5.7
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Frame = -1
Query: 399 PGARRGQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPG---------GVPCVEGVHS 247
P R+ +A+ VP+ PPS E N AT L+ PG G P +GV
Sbjct: 248 PAERQPKATPS--VPLFPPSSEELQANKATLVCLMNDFYPGILTVTWKADGTPITQGVEM 305
Query: 246 VLSSRQS----CVLSYVNL------HKKVMWCPLLVKLLSAVKTWLVSER*FSCAKQITG 97
S+QS SY+NL ++ C + + +A KT +ER + G
Sbjct: 306 TTPSKQSNSNYVASSYLNLTPEQWRSRRSYSCQVTHEGSTAEKTVAPAERISQGQQPSVG 365
Query: 96 PWE 88
W+
Sbjct: 366 SWQ 368
Score = 33.5 bits (75), Expect = 7.5
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPG---------GVPCVEGVHSVLSSR 232
GQ VP+ PPS E N AT L+ PG G P +GV S+
Sbjct: 147 GQPKATPSVPLFPPSSEELQANKATLVCLMNDFYPGILTVTWKADGTPITQGVEMTTPSK 206
Query: 231 QS----CVLSYVNL 202
QS SY+NL
Sbjct: 207 QSNSNYVASSYLNL 220
>gb|AAX30290.1| SJCHGC02770 protein [Schistosoma japonicum]
Length = 74
Score = 33.5 bits (75), Expect = 7.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 548 GQKSKMARERNLEKNKGAKGSQLETNK---KAMSIQCKVCMQTFMCTTTEVKCREHAEAK 378
GQ+ ++++N +K K S +T K KA+ C VC T ++H E K
Sbjct: 4 GQQKMQSQQKNAKKQAELKKSTTDTKKAAAKALHHTCPVCKTQMPDLKTY---KQHFENK 60
Query: 377 HPKTDVYQ 354
HPK+ + Q
Sbjct: 61 HPKSSLPQ 68
>ref|XP_849350.1| PREDICTED: similar to Ig lambda chain C regions [Canis familiaris]
Length = 126
Score = 33.5 bits (75), Expect = 7.5
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Frame = -1
Query: 399 PGARRGQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHS 247
P GQ V + PPS E G N AT L++ P GV P +GV +
Sbjct: 8 PHQDSGQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPVTQGVET 67
Query: 246 VLSSRQS 226
S+QS
Sbjct: 68 TKPSKQS 74
>ref|XP_850308.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
ref|XP_850294.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
ref|XP_849413.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
ref|XP_543599.2| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
Length = 126
Score = 33.1 bits (74), Expect = 9.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHSVLSSR 232
GQ V + PPS E G N AT L++ P GV P +GV + S+
Sbjct: 21 GQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPVTQGVETTKPSK 80
Query: 231 QS 226
QS
Sbjct: 81 QS 82
>ref|XP_849367.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
Length = 166
Score = 33.1 bits (74), Expect = 9.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHSVLSSR 232
GQ V + PPS E G N AT L++ P GV P +GV + S+
Sbjct: 61 GQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPITQGVETTKPSK 120
Query: 231 QS 226
QS
Sbjct: 121 QS 122
>emb|CAG12588.1| unnamed protein product [Tetraodon nigroviridis]
Length = 951
Score = 33.1 bits (74), Expect = 9.8
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Frame = -1
Query: 396 GARRGQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGVPCVEGVHSVLSSRQSC-- 223
G RG+ + RVP P EE PG P V GVH L+ S
Sbjct: 627 GQHRGRGEKAARVPPAVPGEE-----------------PGVRPAVRGVHQDLTGTWSASG 669
Query: 222 -----VLSYVNLHKKVMWCPLLVKLL 160
+ S++ LH+K +C LL L
Sbjct: 670 APPERLRSFLFLHQKFSFCSLLTPQL 695
>ref|XP_543600.2| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
Length = 141
Score = 33.1 bits (74), Expect = 9.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHSVLSSR 232
GQ V + PPS E G N AT L++ P GV P +GV + S+
Sbjct: 36 GQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPITQGVETTKPSK 95
Query: 231 QS 226
QS
Sbjct: 96 QS 97
>ref|XP_855821.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) isoform 3 [Canis familiaris]
Length = 231
Score = 33.1 bits (74), Expect = 9.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHSVLSSR 232
GQ V + PPS E G N AT L++ P GV P +GV + S+
Sbjct: 126 GQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPVTQGVETTKPSK 185
Query: 231 QS 226
QS
Sbjct: 186 QS 187
>gb|AAH50920.2| Dentatorubral pallidoluysian atrophy [Mus musculus]
gb|AAH53051.1| Dentatorubral pallidoluysian atrophy [Mus musculus]
ref|NP_031907.2| dentatorubral pallidoluysian atrophy [Mus musculus]
gb|AAC36003.1| DRPLA [Mus musculus]
Length = 1175
Score = 33.1 bits (74), Expect = 9.8
Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Frame = -3
Query: 706 AGTDPPERSGLPFPRSFP*TTNLTRSGAGRPPGEVRVPAVDRRRIHPPWAVATARSP--R 533
A PP P P P + + +G PPG + P + P A ++A P R
Sbjct: 315 ASASPPGMGAQPIPGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPLPPASSSAPGPPMR 374
Query: 532 WPASATWRRTXXXXXXXXXXXXXXXXXXAKCACKHSCVPRLK*SAGSTP----RPSIPRQ 365
+P S++ A + HS P S + P +PS+P Q
Sbjct: 375 YPYSSSSSSAAASSSSSSSSASQYPASQALPSYPHSFPPPTSMSVSNQPPKYTQPSLPSQ 434
Query: 364 TCTSASP 344
S P
Sbjct: 435 AVWSQGP 441
>dbj|BAA13450.1| DRPLA protein [Mus musculus]
Length = 1175
Score = 33.1 bits (74), Expect = 9.8
Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Frame = -3
Query: 706 AGTDPPERSGLPFPRSFP*TTNLTRSGAGRPPGEVRVPAVDRRRIHPPWAVATARSP--R 533
A PP P P P + + +G PPG + P + P A ++A P R
Sbjct: 315 ASASPPGMGAQPIPGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPLPPASSSAPGPPMR 374
Query: 532 WPASATWRRTXXXXXXXXXXXXXXXXXXAKCACKHSCVPRLK*SAGSTP----RPSIPRQ 365
+P S++ A + HS P S + P +PS+P Q
Sbjct: 375 YPYSSSSSSAAASSSSSSSSASQYPASQALPSYPHSFPPPTSMSVSNQPPKYTQPSLPSQ 434
Query: 364 TCTSASP 344
S P
Sbjct: 435 AVWSQGP 441
>ref|XP_849383.1| PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1
precursor (Immunoglobulin-related 14.1 protein)
(Immunoglobulin omega polypeptide) (Lambda 5) (CD179b
antigen) [Canis familiaris]
Length = 187
Score = 33.1 bits (74), Expect = 9.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = -1
Query: 384 GQASQDRRVPVLPPSEEVKGLNLATSAGLVTTIGPGGV---------PCVEGVHSVLSSR 232
GQ V + PPS E G N AT L++ P GV P +GV + S+
Sbjct: 82 GQPKASPSVTLFPPSSEELGANKATLVCLISDFYPSGVTVAWKADGSPVTQGVETTKPSK 141
Query: 231 QS 226
QS
Sbjct: 142 QS 143
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,681,270,414
Number of Sequences: 3454138
Number of extensions: 36144204
Number of successful extensions: 121222
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 115528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121153
length of database: 1,185,965,366
effective HSP length: 126
effective length of database: 750,743,978
effective search space used: 81831093602
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)