BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.707
(919 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_468444.1| putative 60S ribosomal protein L28 [Oryza ... 252 2e-65
gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sa... 251 4e-65
ref|NP_916542.1| ribosomal protein L28-like [Oryza sativa (... 249 1e-64
gb|ABA46763.1| unknown [Solanum tuberosum] 213 6e-54
ref|NP_179563.1| structural constituent of ribosome [Arabid... 205 2e-51
ref|NP_194670.1| structural constituent of ribosome [Arabid... 201 3e-50
gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sa... 185 2e-45
gb|AAX48862.1| L28 [Suberites domuncula] 94 6e-18
gb|ABA46762.1| unknown [Solanum tuberosum] 90 1e-16
ref|XP_747557.1| ribosomal L28e protein family [Aspergillus... 89 3e-16
dbj|BAE61777.1| unnamed protein product [Aspergillus oryzae] 88 4e-16
ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella... 87 7e-16
ref|XP_962926.1| hypothetical protein [Neurospora crassa N1... 85 3e-15
emb|CAA22600.1| rpl28 [Schizosaccharomyces pombe] >gi|19114... 83 2e-14
gb|AAM27485.1| GH04183p [Drosophila melanogaster] 82 2e-14
gb|AAX62393.1| ribosomal protein L28 [Lysiphlebus testaceipes] 80 1e-13
emb|CAJ17401.1| ribosomal protein L28e [Carabus granulatus] 80 1e-13
gb|EAQ89008.1| hypothetical protein CHGG_05627 [Chaetomium ... 80 1e-13
emb|CAJ17402.1| ribosomal protein L28e [Eucinetus sp. APV-2... 80 1e-13
ref|XP_761155.1| hypothetical protein UM05008.1 [Ustilago m... 80 1e-13
ref|XP_533581.2| PREDICTED: similar to ribosomal protein L2... 80 1e-13
ref|NP_001016714.1| ribosomal protein L28 [Xenopus tropicalis] 79 2e-13
gb|AAV34840.1| ribosomal protein L28 [Bombyx mori] 79 2e-13
ref|XP_789202.1| PREDICTED: similar to ribosomal protein L2... 79 2e-13
gb|AAK92164.1| ribosomal protein L28 [Spodoptera frugiperda... 79 2e-13
gb|AAH78544.1| Unknown (protein for MGC:85393) [Xenopus lae... 79 2e-13
gb|AAR11386.1| 60S ribosomal protein L28 [Hippocampus comes] 79 2e-13
ref|NP_728840.1| Ribosomal protein L28 CG12740-PD, isoform ... 79 3e-13
ref|XP_625152.1| PREDICTED: similar to ribosomal protein L2... 79 3e-13
gb|EAA10888.3| ENSANGP00000014265 [Anopheles gambiae str. P... 78 4e-13
emb|CAH57698.1| 60S ribosomal protein L28 [Platichthys flesus] 78 6e-13
gb|AAH86932.1| Ribosomal protein L28 [Mus musculus] >gi|193... 78 6e-13
dbj|BAD26660.1| Ribosomal protein L28 [Plutella xylostella] 78 6e-13
gb|AAK95155.1| ribosomal protein L28 [Ictalurus punctatus] 77 7e-13
gb|AAA85657.1| ribosomal protein L28 >gi|1096941|prf||21132... 77 7e-13
emb|CAJ17403.1| ribosomal protein L28e [Meladema coriacea] 77 7e-13
gb|AAT68160.1| 60S ribosomal protein L28 [Danio rerio] >gi|... 77 7e-13
ref|NP_000982.2| ribosomal protein L28 [Homo sapiens] >gi|1... 77 9e-13
gb|AAI02345.1| Hypothetical protein LOC618702 [Bos taurus] ... 77 9e-13
gb|AAX43853.1| ribosomal protein L28 [synthetic construct] 77 9e-13
gb|AAH86797.1| Ribosomal protein L28 [Mus musculus] 76 2e-12
gb|AAH53798.1| MGC64430 protein [Xenopus laevis] 76 2e-12
gb|AAH10182.1| Ribosomal protein L28 [Homo sapiens] 76 2e-12
gb|AAR09798.1| similar to Drosophila melanogaster CG12740 [... 76 2e-12
gb|AAY43419.1| ribosomal protein L28 [Phytophthora infestans] 75 3e-12
ref|XP_520919.1| PREDICTED: similar to ribosomal protein L2... 75 4e-12
gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina] 75 5e-12
gb|AAV91468.1| ribosomal protein 30 [Lonomia obliqua] 74 6e-12
gb|EAL30177.1| GA11782-PA [Drosophila pseudoobscura] 74 6e-12
emb|CAJ17404.1| ribosomal protein L28e [Sphaerius sp. APV-2... 74 8e-12
ref|XP_664973.1| 60S ribosomal protein L28 [Cryptosporidium... 72 2e-11
emb|CAH65438.1| hypothetical protein [Gallus gallus] 72 3e-11
ref|XP_625720.1| 60S ribosomal protein L28 [Cryptosporidium... 72 4e-11
ref|XP_640178.1| hypothetical protein DDB0214936 [Dictyoste... 71 5e-11
ref|NP_728841.1| Ribosomal protein L28 CG12740-PC, isoform ... 71 7e-11
sp|P17702|RL28_RAT 60S ribosomal protein L28 >gi|57113|emb|... 70 1e-10
ref|XP_214103.1| PREDICTED: similar to ribosomal protein L2... 70 1e-10
pir||T43380 ribosomal protein L28 - fission yeast (Schizosa... 68 4e-10
ref|XP_212890.1| PREDICTED: similar to ribosomal protein L2... 67 7e-10
gb|AAQ76786.1| 60S ribosomal protein L28 [Herdmania curvata] 65 4e-09
ref|XP_620126.2| PREDICTED: similar to ribosomal protein L2... 60 9e-08
ref|XP_664104.1| hypothetical protein AN6500.2 [Aspergillus... 60 9e-08
gb|AAW41987.1| 60s ribosomal protein, putative [Cryptococcu... 60 1e-07
ref|XP_890841.1| PREDICTED: similar to ribosomal protein L2... 60 1e-07
ref|XP_503934.1| hypothetical protein [Yarrowia lipolytica]... 59 3e-07
ref|NP_506180.1| Ribosomal Protein, Large subunit family me... 57 8e-07
gb|AAY66859.1| ribosomal protein L28 [Ixodes scapularis] 56 2e-06
ref|XP_512911.1| PREDICTED: similar to ribosomal protein L2... 56 2e-06
emb|CAE63977.1| Hypothetical protein CBG08569 [Caenorhabdit... 54 9e-06
emb|CAF89608.1| unnamed protein product [Tetraodon nigrovir... 54 1e-05
dbj|BAD92864.1| ribosomal protein L28 variant [Homo sapiens] 52 2e-05
ref|XP_763632.1| 60S ribosomal protein L28 [Theileria parva... 48 6e-04
ref|XP_828692.1| 60S ribosomal protein L28 [Trypanosoma bru... 48 6e-04
ref|XP_821217.1| 60S ribosomal protein L28 [Trypanosoma cru... 45 0.005
emb|CAJ02970.1| 60S ribosomal protein L28, putative [Leishm... 44 0.009
ref|XP_820211.1| 60S ribosomal protein L28 [Trypanosoma cru... 44 0.012
ref|XP_821218.1| 60S ribosomal protein L28 [Trypanosoma cru... 44 0.012
ref|XP_655185.1| MAK16 protein [Entamoeba histolytica HM-1:... 41 0.075
emb|CAI75800.1| 60S ribosomal protein l28, putative [Theile... 41 0.075
ref|XP_522512.1| PREDICTED: similar to KM-102-derived reduc... 37 1.1
ref|NP_701295.1| hypothetical protein PF11_0437 [Plasmodium... 37 1.4
ref|XP_679451.1| hypothetical protein [Plasmodium berghei s... 37 1.4
gb|AAO59038.1| type III effector HopX1 [Pseudomonas syringa... 35 3.1
emb|CAG13061.1| unnamed protein product [Tetraodon nigrovir... 35 4.1
ref|XP_792350.1| PREDICTED: similar to CG32030-PA, isoform ... 35 4.1
ref|ZP_00420382.1| hypothetical protein Bcep1808DRAFT_6875 ... 35 4.1
ref|NP_941066.2| TBC1 domain family, member 2 [Mus musculus] 35 5.4
dbj|BAE28440.1| unnamed protein product [Mus musculus] 35 5.4
emb|CAE66705.1| Hypothetical protein CBG12050 [Caenorhabdit... 34 7.0
gb|EAS07440.1| hypothetical protein TTHERM_00571760 [Tetrah... 34 7.0
gb|AAA96110.3| Prion-like-(q/n-rich)-domain-bearing protein... 34 7.0
emb|CAG58929.1| unnamed protein product [Candida glabrata C... 34 9.1
gb|AAN52341.1| AvrPphEPsmM6 [Pseudomonas syringae pv. macul... 34 9.1
>ref|XP_468444.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD22882.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD23114.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
Length = 147
Score = 252 bits (643), Expect = 2e-65
Identities = 127/143 (88%), Positives = 134/143 (93%), Gaps = 1/143 (0%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVP L W++V+KNN FLVKQFGN NAKVQFTKEPNNLYN+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPEPLFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 634 PAA-KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
P+ KD+AVVLSTTKTKKQNAPAKL HKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL
Sbjct: 61 PSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQ 389
ARLSSVY SLQVAKSGVKKKNRQ
Sbjct: 121 ARLSSVYRSLQVAKSGVKKKNRQ 143
>gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
ref|XP_475816.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
Length = 147
Score = 251 bits (640), Expect = 4e-65
Identities = 126/143 (88%), Positives = 134/143 (93%), Gaps = 1/143 (0%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVP LIW++V+KNN FLVKQFGN NAKVQFTKEPNNLYN+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 634 PAA-KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
P+ KD+AVVLSTTKTKKQNAPAKL HKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL
Sbjct: 61 PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQ 389
ARLSSVY SLQV+KSG KKKNRQ
Sbjct: 121 ARLSSVYRSLQVSKSGAKKKNRQ 143
>ref|NP_916542.1| ribosomal protein L28-like [Oryza sativa (japonica cultivar-group)]
Length = 145
Score = 249 bits (635), Expect = 1e-64
Identities = 122/144 (84%), Positives = 137/144 (95%), Gaps = 1/144 (0%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MAT+P L+W++V+KNNSFLVKQFGNGNAKVQF+KEPNNLYN+HS+KHSGLANKKTVT+Q
Sbjct: 1 MATIPDSLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQ 60
Query: 634 PAA-KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
PA+ K++AVVLSTTKT+KQN PA L HKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL
Sbjct: 61 PASGKETAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS 386
ARLS+VY SLQVAKSGVKKKNRQ+
Sbjct: 121 ARLSAVYRSLQVAKSGVKKKNRQA 144
>gb|ABA46763.1| unknown [Solanum tuberosum]
Length = 143
Score = 213 bits (543), Expect = 6e-54
Identities = 103/143 (72%), Positives = 123/143 (86%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
M TVPG L+W++V+KNNSFLVK+FGNG+A V F+KEPNNL N+HS+KHSGLANKKTVTIQ
Sbjct: 1 MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQ 60
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
P KD +V+L+T+KTKKQN P+ L +KSVM+KEFR+MAKAV NQV DNYYRPDL K ALA
Sbjct: 61 PEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAALA 120
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS 386
RLS V SL+V KSG KK+NRQ+
Sbjct: 121 RLSVVNRSLKVTKSGAKKRNRQA 143
>ref|NP_179563.1| structural constituent of ribosome [Arabidopsis thaliana]
ref|NP_001031374.1| structural constituent of ribosome [Arabidopsis thaliana]
gb|AAL85109.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gb|AAK92704.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gb|AAC62149.1| putative ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 205 bits (521), Expect = 2e-51
Identities = 100/143 (69%), Positives = 120/143 (83%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS 386
RLS++ L+VAKSG K++NRQ+
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143
>ref|NP_194670.1| structural constituent of ribosome [Arabidopsis thaliana]
emb|CAB79699.1| putative protein [Arabidopsis thaliana]
gb|AAN15366.1| putative protein [Arabidopsis thaliana]
gb|AAL61935.1| putative protein [Arabidopsis thaliana]
gb|AAM65843.1| putative ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 201 bits (511), Expect = 3e-50
Identities = 98/143 (68%), Positives = 118/143 (82%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K ALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS 386
RLS++ L+VAKSG K++NRQ+
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143
>gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
Length = 133
Score = 185 bits (469), Expect = 2e-45
Identities = 92/106 (86%), Positives = 99/106 (93%), Gaps = 1/106 (0%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVP LIW++V+KNN FLVKQFGN NAKVQFTKEPNNLYN+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 634 PA-AKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
P+ KD+AVVLSTTKTKKQNAPAKL HKSVMRKEFRKMAKAVKNQV
Sbjct: 61 PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQV 106
>gb|AAX48862.1| L28 [Suberites domuncula]
Length = 136
Score = 94.4 bits (233), Expect = 6e-18
Identities = 48/133 (36%), Positives = 82/133 (61%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
+L W++++ ++SFL+++ G + V FT EPNN+ N +SFK +GL NKK V + AA +
Sbjct: 4 ELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAADNK 63
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 437
V+ T ++K + PAK+ ++ + K+ R+ K++K + YRPDL + A+ R S++
Sbjct: 64 GVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDLAELAVRRASAIL 123
Query: 436 LSLQVAKSGVKKK 398
S + AK KK
Sbjct: 124 SSQRPAKRLKGKK 136
>gb|ABA46762.1| unknown [Solanum tuberosum]
Length = 64
Score = 89.7 bits (221), Expect = 1e-16
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = -1
Query: 574 PAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKN 395
P+ L +KSVM+KEFR+MAKAV NQV DNYYRPDL K ALARLS V SL+V KSG KK+N
Sbjct: 2 PSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAALARLSVVNRSLKVTKSGAKKRN 61
Query: 394 RQS 386
RQ+
Sbjct: 62 RQA 64
>ref|XP_747557.1| ribosomal L28e protein family [Aspergillus fumigatus Af293]
gb|EAL85519.1| Ribosomal L28e protein family [Aspergillus fumigatus Af293]
Length = 157
Score = 88.6 bits (218), Expect = 3e-16
Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = -1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
E V DL+WQ+ R N+FLVK+ G + QF+++P NL N SFK++G AN K V +
Sbjct: 4 ERTNVSSDLVWQITRNQNAFLVKRRTGGGS--QFSRDPLNLQNKQSFKYAGYANTKAVGV 61
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAK--LSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKP 464
Q A ++ VV+ T K PAK +S RK+ KAV ++ + N YR DL +
Sbjct: 62 Q-ATENGGVVVITKKPGNPQQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYRADLRED 120
Query: 463 ALARLSSVYLSLQVAKSGVKKKNR 392
A+AR+S++ S + K KK R
Sbjct: 121 AVARVSAIRRSQKPKKDAAPKKLR 144
>dbj|BAE61777.1| unnamed protein product [Aspergillus oryzae]
Length = 157
Score = 88.2 bits (217), Expect = 4e-16
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Frame = -1
Query: 805 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 626
V DL+WQ+ R N+FLVK+ G + QF+++P NL N HSFK++G AN K + +QP
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGS--QFSRDPLNLQNKHSFKYAGYANTKAIGVQPTE 65
Query: 625 KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEF------RKMAKAVKNQVSDNYYRPDLTKP 464
VVL+ K++ A+ K+ +R F RK+ K V ++ + N YR DL +
Sbjct: 66 NGGVVVLT-----KKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYRADLRED 120
Query: 463 ALARLSSVYLSLQVAKSGVKKKNR 392
A+AR+S++ S + K +K R
Sbjct: 121 AVARVSAIRRSQKPKKDTPPQKPR 144
>ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
gb|EAA67132.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
Length = 159
Score = 87.4 bits (215), Expect = 7e-16
Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = -1
Query: 820 REMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVT 641
+E++ + DLIW++VR NN F K NG VQF+++P NL N S KH+G N K V
Sbjct: 5 QELSNISSDLIWEIVRDNNCFSAKSKKNGG--VQFSRDPLNLTNKSSRKHAGFVNDKAVG 62
Query: 640 IQPAAKDSAVVLSTTKTKKQNAPAK--LSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTK 467
I AA + V+ TTK + N PA+ + K RK +AV NQV+ N YR DL
Sbjct: 63 I--AAGEKGAVVVTTKKAQPNKPAQNITTTSYSGSKSNRKTYQAVANQVAKNSYRADLRS 120
Query: 466 PALARLSSVYLSLQVAKSGVKKKNR 392
A+ R S++ S + K ++K R
Sbjct: 121 AAVERASAIKKSHKPVKPEPEQKLR 145
>ref|XP_962926.1| hypothetical protein [Neurospora crassa N150]
ref|XP_326065.1| predicted protein [Neurospora crassa]
gb|EAA33690.1| predicted protein [Neurospora crassa]
Length = 150
Score = 85.1 bits (209), Expect = 3e-15
Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
++ V DLIW++ R +NSFLVK+ G VQF+++P NL N HS K++G N K V +
Sbjct: 3 LSNVSADLIWEITRSHNSFLVKRKSGGG--VQFSRDPLNLTNKHSRKYAGFVNDKAVGVV 60
Query: 634 PAAKDSAVVLSTTKTKKQNAP-AKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
P K VV++T K N P A+ + K RK KA+ QV+ YR DL K A+
Sbjct: 61 PGEK-GGVVVTTKKAGSINKPAARYTVAFGANKTARKTYKAIARQVAG--YRSDLLKAAV 117
Query: 457 ARLSSVYLSLQVAKSGVKKKNR 392
AR S++ S + K +K R
Sbjct: 118 ARASAIRRSQRAVKPEPAQKLR 139
>emb|CAA22600.1| rpl28 [Schizosaccharomyces pombe]
ref|NP_593124.1| hypothetical protein SPAC1687.06c [Schizosaccharomyces pombe 972h-]
sp|O14069|YFF6_SCHPO Probable 60S ribosomal protein C1687.06c
pir||T37749 60s ribosomal protein l28 - fission yeast (Schizosaccharomyces
pombe)
Length = 134
Score = 82.8 bits (203), Expect = 2e-14
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Frame = -1
Query: 808 TVPGDLIWQVVRKNNSFLVK--QFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
+V DLIWQV+R NN FLVK +FG +QF +EP N+ ++ + SGL N K V +Q
Sbjct: 2 SVSNDLIWQVIRDNNRFLVKRPEFGG----IQFNREPVNVSGKNAQRFSGLCNDKAVGVQ 57
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVM-RKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
+ V+++ T K PAKL K V+ RK K++ ++ YR DL K ++
Sbjct: 58 ANSPRGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSV 117
Query: 457 ARLSSVYLSLQVAKS 413
AR S++ S + K+
Sbjct: 118 ARASAILSSQRPKKT 132
>gb|AAM27485.1| GH04183p [Drosophila melanogaster]
Length = 236
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/140 (37%), Positives = 78/140 (55%)
Frame = -1
Query: 820 REMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVT 641
REMAT L W ++R NN+FL+K+ + K F+ EPNNL ++ S+++SG+ +KKT+
Sbjct: 91 REMAT-SSHLNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLG 146
Query: 640 IQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPA 461
+ PAA K K PAK + + + R+ K +KN + + YR DLT+ A
Sbjct: 147 VVPAADKKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAA 206
Query: 460 LARLSSVYLSLQVAKSGVKK 401
L R S+V S + A KK
Sbjct: 207 LRRASAVLRSQKPAPVKGKK 226
>gb|AAX62393.1| ribosomal protein L28 [Lysiphlebus testaceipes]
Length = 137
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ N F+ E NNL N+ S+++SGL + KTV +
Sbjct: 4 LNWMIIRNNNAFLLKK---RNINKPFSTEANNLTNLSSYRYSGLVHSKTVGVVDTPDKKG 60
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
+ T K K PAK K M+ R+ +K +S N YR DLTK AL R S+V
Sbjct: 61 FTVVTKKPKCGKKPAKALEKRTMKAGARRSLYKLKTFLSANKYRRDLTKAALRRASAVLR 120
Query: 433 S---LQVAKSGVKKK 398
S L V K+ KK
Sbjct: 121 SQKPLPVKKARAAKK 135
>emb|CAJ17401.1| ribosomal protein L28e [Carabus granulatus]
Length = 137
Score = 80.1 bits (196), Expect = 1e-13
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ N F+ EP+NL N++SF+++GL +KKTV I
Sbjct: 5 LSWMIIRNNNAFLLKK---RNISKPFSTEPSNLTNLNSFRYNGLIHKKTVGIVEPKDKKG 61
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
+ K KQN P + + M+ R+ ++ + N YR DLTK AL R S++
Sbjct: 62 FTVVYKKANKQNKPRRATITRTMKSGPRRSLHKLRRLMDKNSYRKDLTKVALRRASAILR 121
Query: 433 S---LQVAKSGVKK 401
S L V K KK
Sbjct: 122 SQKPLPVKKQRTKK 135
>gb|EAQ89008.1| hypothetical protein CHGG_05627 [Chaetomium globosum CBS 148.51]
Length = 149
Score = 80.1 bits (196), Expect = 1e-13
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
M+ V DLIW++ R +NS+LVK QF+++P NL N+HS K +G AN K + I
Sbjct: 1 MSNVSADLIWEISRSSNSYLVK-----TRTGQFSRDPLNLTNLHSRKFAGFANDKALGIS 55
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVM--RKEFRKMAKAVKNQVSDNYYRPDLTKPA 461
K V+S K N PA H K RK +AV NQ + N YR DL A
Sbjct: 56 ANEKGGVQVIS-KKAASANKPASGVHTVTYGGNKTSRKTYRAVANQAAKNGYRADLRAAA 114
Query: 460 LARLSSVYLSLQVAKSGVKKKNR 392
++R S++ S + K ++K R
Sbjct: 115 VSRASAIRRSQRAVKPEPEQKLR 137
>emb|CAJ17402.1| ribosomal protein L28e [Eucinetus sp. APV-2005]
Length = 140
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/131 (34%), Positives = 72/131 (54%)
Frame = -1
Query: 805 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 626
+P L+W ++R NN+FL+K+ N F+ E NNL N+ SF+++GL +KK+V +
Sbjct: 1 MPSHLVWSIIRNNNAFLLKK---RNISKPFSTEANNLTNLASFRYNGLIHKKSVGVIDGP 57
Query: 625 KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLS 446
+ K K+QN P + + M+ R+ +K + N+YR DLTK AL R S
Sbjct: 58 SRKGFTVVYKKAKRQNKPKFNTVRRTMKTGPRRSLYKLKRLLQKNHYRTDLTKFALRRAS 117
Query: 445 SVYLSLQVAKS 413
+V S + K+
Sbjct: 118 AVLRSQKPLKT 128
>ref|XP_761155.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
gb|EAK85826.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
Length = 221
Score = 79.7 bits (195), Expect = 1e-13
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W +VR N+SF+VKQ G G F++EP NL +HS+K+SGL N K V I+ AAK
Sbjct: 5 DLQWLLVRNNSSFIVKQKGIGRI---FSREPRNLVQLHSYKYSGLVNAKAVGIE-AAKSG 60
Query: 616 AVVLSTTKTKKQNAPA--KLSHKSVMRK-EFRKMAKAVKNQVSDNYYRPDLTK 467
V+ TTK KQ++ A K + + ++K R+ A AV N V+ YR DLT+
Sbjct: 61 KGVVITTKNAKQSSSAIKKTVNVATLKKGGGRRTAGAVSNVVAKKGYRADLTR 113
>ref|XP_533581.2| PREDICTED: similar to ribosomal protein L28 [Canis familiaris]
Length = 259
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/131 (33%), Positives = 72/131 (54%)
Frame = -1
Query: 823 RREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTV 644
R+ A + L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV
Sbjct: 117 RKGAAAMSAHLQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTV 171
Query: 643 TIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKP 464
++PAA VV+ + Q PA ++ + K R ++++ + N YRPDL
Sbjct: 172 GVEPAADGKGVVVVLKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMA 231
Query: 463 ALARLSSVYLS 431
A+ R S++ S
Sbjct: 232 AIRRASAILRS 242
>ref|NP_001016714.1| ribosomal protein L28 [Xenopus tropicalis]
Length = 137
Score = 79.3 bits (194), Expect = 2e-13
Identities = 51/134 (38%), Positives = 74/134 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R +SFLVK+ N ++ F+ EPNNL +SF+++GL +KKTV ++PAA
Sbjct: 5 LQWMVIRNCSSFLVKR----NHRI-FSTEPNNLKARNSFRYNGLIHKKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V++ K Q PA K + K R +V++ + N YR DL AL R S++
Sbjct: 60 VIVVLKKRAGQRKPATSYEKITINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V KK R
Sbjct: 118 -LKSQKPVVVKKKR 130
>gb|AAV34840.1| ribosomal protein L28 [Bombyx mori]
Length = 139
Score = 79.3 bits (194), Expect = 2e-13
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI--QPAAKD 620
L W ++R NN+FLVK+ N K F+KEPNN+ N+HSF+++GL +KK V + P K
Sbjct: 5 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 61
Query: 619 SAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSV 440
VV K K PAK + + R+ VK + N+YR DL K L R S++
Sbjct: 62 FTVVYK--KAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 119
Query: 439 YLSLQVAKS 413
S + K+
Sbjct: 120 LRSQRPIKA 128
>ref|XP_789202.1| PREDICTED: similar to ribosomal protein L28-like
[Strongylocentrotus purpuratus]
Length = 139
Score = 79.3 bits (194), Expect = 2e-13
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W ++R N+ FL + G G V + EPNNL N +SFK++GL +KK V ++ AA
Sbjct: 5 DLQWLIIRNNSCFL--KHGGG---VTMSTEPNNLKNRNSFKYNGLIHKKAVGVEAAADGK 59
Query: 616 AVVLSTTKTK-KQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSV 440
VVL T K K N PAK ++ M+K+ R+ A++ + YR DL AL R S++
Sbjct: 60 GVVLVTKKIKGTMNKPAKTFNRVEMKKDSRRTLTAIRRTLKKG-YRKDLKMAALRRASAI 118
Query: 439 YLSLQVAKSGVKKK 398
S + S KK+
Sbjct: 119 IRSQKPITSVQKKR 132
>gb|AAK92164.1| ribosomal protein L28 [Spodoptera frugiperda]
sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28
Length = 139
Score = 79.3 bits (194), Expect = 2e-13
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI--QPAAKD 620
L W ++R NN+FLVK+ N K F+KEPNN+ N++S++++GL KK V + P K
Sbjct: 5 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKG 61
Query: 619 SAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSV 440
VV K K N PAK + + + R+ VK + N+YR DL+K L R S++
Sbjct: 62 FTVVYK--KAKATNKPAKNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRASAI 119
Query: 439 YLSLQVAKS 413
S + K+
Sbjct: 120 LRSQRPIKA 128
>gb|AAH78544.1| Unknown (protein for MGC:85393) [Xenopus laevis]
Length = 137
Score = 79.0 bits (193), Expect = 2e-13
Identities = 52/134 (38%), Positives = 74/134 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R +SF+VK+ N +V F+ EPNNL +SF+++GL +KKTV +QPAA
Sbjct: 5 LQWMVIRNCSSFIVKR----NHQV-FSTEPNNLKARNSFRYNGLIHKKTVGVQPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V++ K Q PA K + K R +V++ + N YR DL AL R S++
Sbjct: 60 VIVVLKKRAGQRKPATSYEKISINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V KK R
Sbjct: 118 -LKSQKPVVVKKKR 130
>gb|AAR11386.1| 60S ribosomal protein L28 [Hippocampus comes]
Length = 137
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/134 (38%), Positives = 73/134 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R +SFL+K+ K ++ EPNNL +SF+ +GL +KKTV +QPAA
Sbjct: 5 LQWMVIRNCSSFLLKR-----DKQTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ K Q+ PA +K + K R +V++ + N YR DL AL R S++
Sbjct: 60 VVVVIKKRAGQHKPANSYNKITINKNGRATLNSVRHIIRKNNYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V KK R
Sbjct: 118 -LKSQKPVVVKKKR 130
>ref|NP_728840.1| Ribosomal protein L28 CG12740-PD, isoform D [Drosophila
melanogaster]
ref|NP_728839.1| Ribosomal protein L28 CG12740-PB, isoform B [Drosophila
melanogaster]
ref|NP_647791.2| Ribosomal protein L28 CG12740-PA, isoform A [Drosophila
melanogaster]
gb|AAL49066.1| RE52852p [Drosophila melanogaster]
gb|AAN11547.1| CG12740-PD, isoform D [Drosophila melanogaster]
gb|AAF47742.1| CG12740-PB, isoform B [Drosophila melanogaster]
gb|AAN11546.1| CG12740-PA, isoform A [Drosophila melanogaster]
sp|Q9VZS5|RL28_DROME 60S ribosomal protein L28
Length = 144
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/131 (35%), Positives = 73/131 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ + K F+ EPNNL ++ S+++SG+ +KKT+ + PAA
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
K K PAK + + + R+ K +KN + + YR DLT+ AL R S+V
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123
Query: 433 SLQVAKSGVKK 401
S + A KK
Sbjct: 124 SQKPAPVKGKK 134
>ref|XP_625152.1| PREDICTED: similar to ribosomal protein L28 [Apis mellifera]
Length = 138
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ N F+ E NNL N+ S+++SGL ++K+V I +
Sbjct: 5 LNWMIIRNNNAFLLKK---RNINKPFSTESNNLTNLSSYRYSGLIHRKSVGIVDTSDKKG 61
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
+ K K N PAK + + M+ R+ +K ++ N YR DLTK AL R S+V
Sbjct: 62 FTIVYKKAKAMNKPAKATVRCTMKAGARRSLYKLKRLLTKNKYRIDLTKAALRRASAVLR 121
Query: 433 S---LQVAKSGVKKK 398
S L K+ KK
Sbjct: 122 SQKPLPAKKTRTTKK 136
>gb|EAA10888.3| ENSANGP00000014265 [Anopheles gambiae str. PEST]
ref|XP_315433.2| ENSANGP00000014265 [Anopheles gambiae str. PEST]
Length = 133
Score = 78.2 bits (191), Expect = 4e-13
Identities = 47/127 (37%), Positives = 71/127 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W +VR +N+FL+K+ + + F+ EP NL N+ SF++SGL + KT+TI PA K
Sbjct: 7 LNWLIVRDHNAFLLKR---RDIRKPFSTEPGNLTNLSSFRYSGLVHHKTITITPAEK-KG 62
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V + K N PAK K +++ R+ K + N + N YR DL AL R S++
Sbjct: 63 VNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRASAILR 122
Query: 433 SLQVAKS 413
S + K+
Sbjct: 123 SQRPTKT 129
>emb|CAH57698.1| 60S ribosomal protein L28 [Platichthys flesus]
Length = 137
Score = 77.8 bits (190), Expect = 6e-13
Identities = 48/134 (35%), Positives = 73/134 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R +SFL+K+ G ++ EPNNL + + F+ +GL +KKTV +QPAA
Sbjct: 5 LQWMVIRNCSSFLIKRNGQ-----TYSTEPNNLKSRNPFRFNGLVHKKTVGVQPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ K + Q+ PA K + K R ++++ + N YR DL AL R S++
Sbjct: 60 VVVVLKKRRGQHKPAGSYEKITINKNSRATLNSLRHIIRKNNYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V +K R
Sbjct: 118 -LKSQKPVVVRKKR 130
>gb|AAH86932.1| Ribosomal protein L28 [Mus musculus]
gb|AAH24395.1| Ribosomal protein L28 [Mus musculus]
ref|NP_033107.1| ribosomal protein L28 [Mus musculus]
dbj|BAB31362.1| unnamed protein product [Mus musculus]
dbj|BAB28192.1| unnamed protein product [Mus musculus]
dbj|BAC36209.1| unnamed protein product [Mus musculus]
gb|AAH97682.1| Unknown (protein for MGC:115078) [Xenopus laevis]
ref|NP_073188.2| ribosomal protein L28 [Rattus norvegicus]
gb|AAH92012.1| Ribosomal protein L28 [Mus musculus]
gb|AAH81800.1| Ribosomal protein L28 [Rattus norvegicus]
sp|P41105|RL28_MOUSE 60S ribosomal protein L28
emb|CAA52848.1| ribosomal protein L28 [Mus musculus]
Length = 137
Score = 77.8 bits (190), Expect = 6e-13
Identities = 46/134 (34%), Positives = 74/134 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V K+ R
Sbjct: 118 -LRSQKPVVVKRKR 130
>dbj|BAD26660.1| Ribosomal protein L28 [Plutella xylostella]
Length = 139
Score = 77.8 bits (190), Expect = 6e-13
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+F+VK+ + K F+KEPNN+ N+ S++++GL +KK V +
Sbjct: 5 LNWMIIRNNNAFIVKK---RDIKKPFSKEPNNVTNLSSYRYNGLIHKKAVGVVENPDRKG 61
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAK----AVKNQVSDNYYRPDLTKPALARLS 446
+ T K K N P K+++R+ F+ A+ VK + N+YR DLTK L R S
Sbjct: 62 FTVVTKKAKATNKPV----KNIVRRSFKTGARRSLFKVKRLLKANHYRTDLTKATLRRAS 117
Query: 445 SVYLSLQVAKS 413
++ S + K+
Sbjct: 118 AILRSQRPIKA 128
>gb|AAK95155.1| ribosomal protein L28 [Ictalurus punctatus]
Length = 137
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/134 (35%), Positives = 70/134 (52%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R N+SFL+K+ G ++ EPNNL ++F+ +GL ++KTV ++ AA
Sbjct: 5 LQWMVIRNNSSFLIKRNGQ-----TYSTEPNNLKARNAFRFNGLIHRKTVGVEQAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ K PAK K + K R ++N + N YR DL AL R S++
Sbjct: 60 VVIILKKRAGHRKPAKAYEKITINKNSRTTLNRLRNIIRKNKYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V KK R
Sbjct: 118 -LKSQKPVVVKKKR 130
>gb|AAA85657.1| ribosomal protein L28
prf||2113200D ribosomal protein L28
Length = 137
Score = 77.4 bits (189), Expect = 7e-13
Identities = 45/134 (33%), Positives = 74/134 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K + K+ R
Sbjct: 118 -LRTQKPVMVKRKR 130
>emb|CAJ17403.1| ribosomal protein L28e [Meladema coriacea]
Length = 137
Score = 77.4 bits (189), Expect = 7e-13
Identities = 45/121 (37%), Positives = 65/121 (53%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ N F+ EP+NL N+ SF+++GL +KKTV I
Sbjct: 5 LSWMIIRNNNAFLLKK---RNINKPFSTEPSNLPNLSSFRYNGLIHKKTVGIIEPKDKKG 61
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
+ K KQN P K + M+ R+ ++ + N YR DLTK AL R S+V
Sbjct: 62 FTVVYKKANKQNKPRKATVTRTMKXGPRRSLYKLRRLLDKNSYRKDLTKVALRRASAVXR 121
Query: 433 S 431
S
Sbjct: 122 S 122
>gb|AAT68160.1| 60S ribosomal protein L28 [Danio rerio]
ref|NP_957355.1| ribosomal protein L28-like [Danio rerio]
gb|AAH55584.1| Ribosomal protein L28-like [Danio rerio]
Length = 138
Score = 77.4 bits (189), Expect = 7e-13
Identities = 49/134 (36%), Positives = 74/134 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R ++SFL+K+ K ++ EPNNL ++F+ +GL ++KT+ I+PAA
Sbjct: 6 LQWMVIRNSSSFLIKR-----NKQTYSTEPNNLKARNAFRFNGLIHRKTIGIEPAADGKG 60
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ K Q PA K + K R +V+N + N YR DL AL R+S++ L
Sbjct: 61 VVVVLKKRSGQRKPATSYGKITINKNSRATLASVRNIIRKNKYRRDLRMAALRRVSAI-L 119
Query: 433 SLQVAKSGVKKKNR 392
S Q KK++R
Sbjct: 120 SSQKPVVVRKKRSR 133
>ref|NP_000982.2| ribosomal protein L28 [Homo sapiens]
gb|AAH10173.1| Ribosomal protein L28 [Homo sapiens]
emb|CAG33305.1| RPL28 [Homo sapiens]
gb|AAX32251.1| ribosomal protein L28 [synthetic construct]
gb|AAH11582.1| Ribosomal protein L28 [Homo sapiens]
sp|P46779|RL28_HUMAN 60S ribosomal protein L28
Length = 137
Score = 77.0 bits (188), Expect = 9e-13
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>gb|AAI02345.1| Hypothetical protein LOC618702 [Bos taurus]
ref|NP_001030580.1| hypothetical protein LOC618702 [Bos taurus]
Length = 137
Score = 77.0 bits (188), Expect = 9e-13
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>gb|AAX43853.1| ribosomal protein L28 [synthetic construct]
Length = 138
Score = 77.0 bits (188), Expect = 9e-13
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>gb|AAH86797.1| Ribosomal protein L28 [Mus musculus]
Length = 137
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/134 (34%), Positives = 73/134 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R +++ + N YRPDL A+ R S++
Sbjct: 60 VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRLMIRKNKYRPDLRMAAIRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V K+ R
Sbjct: 118 -LRSQKPVVVKRKR 130
>gb|AAH53798.1| MGC64430 protein [Xenopus laevis]
Length = 137
Score = 75.9 bits (185), Expect = 2e-12
Identities = 50/134 (37%), Positives = 73/134 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W +VR +SF+VK+ N +V F+ EPNNL +SF+++G +KKTV ++PAA
Sbjct: 5 LQWMIVRNCSSFIVKR----NHQV-FSTEPNNLKARNSFRYNGPIHKKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V++ K Q PA K + K R +V++ + N YR DL AL R S++
Sbjct: 60 VIVVMKKRAGQRKPATSYEKITINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V KK R
Sbjct: 118 -LKSQKPVVVKKKR 130
>gb|AAH10182.1| Ribosomal protein L28 [Homo sapiens]
Length = 137
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/121 (33%), Positives = 68/121 (56%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + + R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>gb|AAR09798.1| similar to Drosophila melanogaster CG12740 [Drosophila yakuba]
Length = 144
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/131 (35%), Positives = 72/131 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ + K F+ EPNNL ++ S+++SG+ +KKT+ + PAA
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
K K PAK + + + R+ K +KN + + YR LT+ AL R S+V
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKGLTQAALRRASAVLR 123
Query: 433 SLQVAKSGVKK 401
S + A KK
Sbjct: 124 SQKPAPVKGKK 134
>gb|AAY43419.1| ribosomal protein L28 [Phytophthora infestans]
Length = 139
Score = 75.5 bits (184), Expect = 3e-12
Identities = 49/132 (37%), Positives = 71/132 (53%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W + + +SFLVK+ GN +F +E NL N + K+SGLA+ K V I + D
Sbjct: 6 LTWLLTKNTSSFLVKRNGN-----EFAREKFNLLNRNCRKYSGLASTKAVDI--SISDKK 58
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V L+T K PAK + +RK R A ++ +S NYYR DL K ALA+ S +
Sbjct: 59 VTLTTKIEKATKKPAKAQNAVPLRKGARGGANTIRANISRNYYRRDLKKAALAKWSRLST 118
Query: 433 SLQVAKSGVKKK 398
+V + ++KK
Sbjct: 119 VAKVEQGVLQKK 130
>ref|XP_520919.1| PREDICTED: similar to ribosomal protein L28; 60S ribosomal protein
L28 [Pan troglodytes]
Length = 137
Score = 75.1 bits (183), Expect = 4e-12
Identities = 41/121 (33%), Positives = 67/121 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R ++
Sbjct: 60 VVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRARAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina]
Length = 135
Score = 74.7 bits (182), Expect = 5e-12
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W ++R N+SFL+K+ G + + + NNL I+SF+++GL KKTV ++PA
Sbjct: 4 DLQWMIIRNNSSFLLKRPG-----LTISTKKNNLKGINSFRYNGLIRKKTVGVEPAKDGK 58
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 437
VVL T + P K + ++++ R+ ++ + N YR DL A+ R S++
Sbjct: 59 GVVLVTRNSTGGRKPNKSFTRVELKRDPRRTFATIRKTIRRNKYRKDLKMAAVRRASAIL 118
Query: 436 LS---LQVAKSGVKKKN 395
S + V K+G K++
Sbjct: 119 RSQKPIVVKKAGRAKRD 135
>gb|AAV91468.1| ribosomal protein 30 [Lonomia obliqua]
Length = 139
Score = 74.3 bits (181), Expect = 6e-12
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI--QPAAKD 620
L W ++R N++F+VK+ N K F+KEPNN+ N++S++++GL +KK V + P K
Sbjct: 5 LNWMIIRNNSAFIVKK---RNIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 61
Query: 619 SAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAK----AVKNQVSDNYYRPDLTKPALAR 452
VV K K N P K+++R+ F+ A+ K + N+YR DLTK L R
Sbjct: 62 FTVVYK--KAKATNKPV----KNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRR 115
Query: 451 LSSVYLSLQVAKSGVKK 401
S++ S + K VKK
Sbjct: 116 ASAILRSQRPIK--VKK 130
>gb|EAL30177.1| GA11782-PA [Drosophila pseudoobscura]
Length = 144
Score = 74.3 bits (181), Expect = 6e-12
Identities = 44/131 (33%), Positives = 71/131 (54%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ + F+ EPNNL ++ S+++SG+ +KKT+ + P A
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVNKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPTADKKG 63
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
K K PAK + + + R+ K +KN + + YR DLT+ AL R S+V
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123
Query: 433 SLQVAKSGVKK 401
S + + KK
Sbjct: 124 SQKPLPTKGKK 134
>emb|CAJ17404.1| ribosomal protein L28e [Sphaerius sp. APV-2005]
Length = 138
Score = 73.9 bits (180), Expect = 8e-12
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W +VR NN+FL+K+ N F+ EPNNL N+ S+++SG+ K+ V ++ +
Sbjct: 5 LNWLIVRNNNAFLLKK---RNINKPFSMEPNNLKNLSSYRYSGIVRKRVVGVEEPKDKNG 61
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VL T K+K + K M+ R+ +K + N YR DL K AL R +++
Sbjct: 62 FVLVTKKSKNLRQLKRSLTKRTMKSGLRRSLNKLKKTLKANGYRQDLLKAALQRATAIKR 121
Query: 433 SLQ--VAKSGVKKKNRQ 389
S + AK K K +
Sbjct: 122 SQKPLPAKKQTKPKKTE 138
>ref|XP_664973.1| 60S ribosomal protein L28 [Cryptosporidium hominis TU502]
gb|EAL34743.1| 60S ribosomal protein L28 [Cryptosporidium hominis]
Length = 127
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
+L+WQ V+KN SF+ K G FT EP N+ N+++ K+SGLA ++++++ +
Sbjct: 5 ELLWQCVKKNTSFIKKSNG-----FTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSN 59
Query: 616 AVVLSTTKTKKQN-------APAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
++ K K+N P KL K + +F++ K +KNQ+S RPDL A+
Sbjct: 60 GKLVKNAKITKKNTGSSTIRCPKKLISKVNLSNDFKQAKKTIKNQISS---RPDLKNVAI 116
Query: 457 ARLSSVYLSLQVAK 416
R Y +Q AK
Sbjct: 117 IR----YRKIQKAK 126
>emb|CAH65438.1| hypothetical protein [Gallus gallus]
Length = 138
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/121 (33%), Positives = 67/121 (55%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ ++ EPNNL + +SF+++GL ++KT+ ++PA
Sbjct: 5 LQWMVVRNCSSFLIKRNHQ-----TYSTEPNNLKSRNSFRYNGLIHRKTLGVEPAPDGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
V++ K Q PA + +R+ R ++++ V N YRPDL AL R S++
Sbjct: 60 VLVVLKKRSGQRKPAASYDRISIRRNARATLSSLRHLVRKNRYRPDLRMAALRRASAILR 119
Query: 433 S 431
S
Sbjct: 120 S 120
>ref|XP_625720.1| 60S ribosomal protein L28 [Cryptosporidium parvum Iowa II]
gb|EAK87622.1| 60S ribosomal protein L28 , transcript identified by EST
[Cryptosporidium parvum]
Length = 127
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
+L+WQ V+KN SF+ K G FT EP N+ N+++ K+SGLA ++++++ +
Sbjct: 5 ELLWQCVKKNTSFIKKNNG-----FTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSN 59
Query: 616 AVVLSTTKTKKQN-------APAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
++ K K+N P KL K + F++ K +KNQ+S RPDL A+
Sbjct: 60 GKLVKNAKITKKNTGSSTIRCPKKLISKVNLSNNFKQAKKTIKNQISS---RPDLKNVAI 116
Query: 457 ARLSSVYLSLQVAK 416
R Y +Q AK
Sbjct: 117 IR----YRKIQKAK 126
>ref|XP_640178.1| hypothetical protein DDB0214936 [Dictyostelium discoideum]
gb|AAG32533.1| ribosomal protein L28 [Dictyostelium discoideum]
sp|Q9GS21|RL28_DICDI 60S ribosomal protein L28
gb|EAL66049.1| hypothetical protein DDB0214936 [Dictyostelium discoideum]
Length = 132
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL+W +++KNN+FL G + + EP NL N +S K+SGLA + T+ + AA +
Sbjct: 4 DLVWSIIKKNNAFLKSSHG-----LTLSAEPGNLRNKNSLKYSGLARRTTIDV--AAVNG 56
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRK-EFRKMAKAVKNQVSDNYYRPDLTKPALARLSSV 440
VV+S+ KK PA+ + RK A+ VK + Y P+L AL RL V
Sbjct: 57 KVVVSSKIVKKAAFPAQSKKTTTFSTVNTRKTARFVKTLATQ--YAPELRAAALGRLHRV 114
Query: 439 YLSLQVAKSGVKKKNRQS 386
+L+ AK +K +++
Sbjct: 115 QSALRSAKKAAARKAKKN 132
>ref|NP_728841.1| Ribosomal protein L28 CG12740-PC, isoform C [Drosophila
melanogaster]
gb|AAF47743.1| CG12740-PC, isoform C [Drosophila melanogaster]
Length = 165
Score = 70.9 bits (172), Expect = 7e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W ++R NN+FL+K+ + K F+ EPNNL ++ S+++SG+ +KKT+ + PAA
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
K K PAK + + + R+ K +KN + + YR DLT+ +A
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQVIMA 116
>sp|P17702|RL28_RAT 60S ribosomal protein L28
emb|CAA36846.1| unnamed protein product [Rattus norvegicus]
prf||1617101B ribosomal protein L28
Length = 137
Score = 70.1 bits (170), Expect = 1e-10
Identities = 43/134 (32%), Positives = 71/134 (52%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R ++++ + N YRPDL A+ R S++
Sbjct: 60 VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V K+ R
Sbjct: 118 -LRSQKPVVVKRKR 130
>ref|XP_214103.1| PREDICTED: similar to ribosomal protein L28 [Rattus norvegicus]
Length = 143
Score = 70.1 bits (170), Expect = 1e-10
Identities = 43/135 (31%), Positives = 70/135 (51%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EPNNL +S +++GL ++KTV ++PAA
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSLRYNGLIHRKTVGVEPAADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K +++ + N YRPDL A+ ++S L
Sbjct: 60 VVVVMKRRSGQRKPATSYVRTTINKNAPATLSSIRQMIRKNKYRPDLRMAAI-HMASAIL 118
Query: 433 SLQVAKSGVKKKNRQ 389
Q +K+ RQ
Sbjct: 119 QSQKPMVVKRKQTRQ 133
>pir||T43380 ribosomal protein L28 - fission yeast (Schizosaccharomyces pombe)
(fragment)
dbj|BAA31554.1| ribosomal protein L28 homolog [Schizosaccharomyces pombe]
Length = 123
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Frame = -1
Query: 778 VRKNNSFLVK--QFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVL 605
+R NN FLVK +FG +QF +EP N+ ++ + SGL N K V +Q + V++
Sbjct: 1 IRDNNRFLVKRPEFGG----IQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPRGVVLI 56
Query: 604 STTKTKKQNAPAKLSHKSVM-RKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSL 428
+ T K PAKL K V+ RK K++ ++ YR DL K ++AR S++ S
Sbjct: 57 TKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSSQ 116
Query: 427 QVAKS 413
+ K+
Sbjct: 117 RPKKT 121
>ref|XP_212890.1| PREDICTED: similar to ribosomal protein L28 [Rattus norvegicus]
Length = 137
Score = 67.4 bits (163), Expect = 7e-10
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W VVR +SFL+K+ K ++ EP NL +SF ++GL ++KTV ++P A
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPKNLKARNSFGYNGLIHRKTVGVEPTADGKG 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ + Q PA ++ + K R +++ + N Y PDL + R S++
Sbjct: 60 VVVVMKRRSGQRKPAISYVRTTINKNARATLSSIRQMIRKNKYHPDLRMVTIRRASAI-- 117
Query: 433 SLQVAKSGVKKKNR 392
L+ K V K+ R
Sbjct: 118 -LRSQKPVVVKRKR 130
>gb|AAQ76786.1| 60S ribosomal protein L28 [Herdmania curvata]
Length = 118
Score = 65.1 bits (157), Expect = 4e-09
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = -1
Query: 721 QFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMR 542
QFT EPNNL N +S++ +GL + KTV ++P + VVL T K P ++ +
Sbjct: 13 QFTTEPNNLKNKNSYRFNGLVHPKTVAVEPDPEGKGVVLVTKKKGYYRKPQDGFNRVTLS 72
Query: 541 KEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVK 404
+ R+ ++++ + N YR DL A+ R S++ S + AK K
Sbjct: 73 RGSRRSLRSIRRTIRKNRYRKDLKMAAVRRASALLRSQKPAKVAAK 118
>ref|XP_620126.2| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
Length = 156
Score = 60.5 bits (145), Expect = 9e-08
Identities = 34/110 (30%), Positives = 59/110 (53%)
Frame = -1
Query: 721 QFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMR 542
+++ EPNNL +SF ++GL ++KTV ++ AA VV+ + Q PA ++ +
Sbjct: 43 EYSTEPNNLKARNSFCYNGLIHRKTVGVEQAADSKGVVVVMKRRSGQRKPATSYVRTTIN 102
Query: 541 KEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNR 392
K R ++++ + N YRPDL A+ R ++ L+ K V K+ R
Sbjct: 103 KNARATLSSIRHMIRKNKYRPDLRMAAIRRARAI---LRSQKPVVVKRKR 149
>ref|XP_664104.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
gb|EAA57840.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
Length = 192
Score = 60.5 bits (145), Expect = 9e-08
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Frame = -1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFK------------ 674
E + V DL+WQ+ R N++LVK+ N + VQF+++P N+ N HSFK
Sbjct: 4 ERSNVSSDLVWQLTRNQNAYLVKR--NTHGGVQFSRDPLNVLNKHSFKDKEKHPLTVTAM 61
Query: 673 -------HSGLANKKTVTIQ---------------PAAKDSAVVLSTTKTKKQNAPAKLS 560
H G + K I+ A ++ VV T K PAK
Sbjct: 62 LVRWLLQHQGKSRKPLSMIKLSQEWVLTSNQAIGVQATENGGVVTITKKPGTSQQPAKSL 121
Query: 559 HKSVM--RKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNR 392
RK+ K V ++ + N YR DL + A++R+S++ S + K +K R
Sbjct: 122 AVVTYGPGASNRKIYKGVADRTAKNGYRADLRQEAVSRVSAIRRSQKAKKETPARKPR 179
>gb|AAW41987.1| 60s ribosomal protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_569294.1| 60s ribosomal protein [Cryptococcus neoformans var. neoformans
JEC21]
gb|EAL22806.1| hypothetical protein CNBB0270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 156
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W +VR NSF VK G+ V F++E NL N + K+SGLAN K V+I P+A
Sbjct: 4 DLTWLLVRNWNSFQVK---GGHGPV-FSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGG 59
Query: 616 AVVLSTTKTKKQNAPAKL-SHKSVMRKEF-RKMAKAVKNQVSDNYYRPDLTKPALARLSS 443
+ K N A SH ++ R R+ K + + YR DL A+AR S+
Sbjct: 60 ITITKIKADAKPNQVASARSHVTLKRSTGPRRANKIAAAETAGKGYRADLRAVAVARTSA 119
Query: 442 V 440
+
Sbjct: 120 L 120
>ref|XP_890841.1| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
ref|XP_922343.1| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
Length = 136
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/117 (30%), Positives = 59/117 (50%)
Frame = -1
Query: 781 VVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLS 602
VV+ SFL+K+ K + EPNNL +SF ++ ++KTV +QP VV+
Sbjct: 2 VVQNCFSFLIKR-----KKQTYITEPNNLKARNSFSYNRQIHRKTVRVQPETDGKGVVVV 56
Query: 601 TTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLS 431
T + Q PA ++ + K ++++ + N YRPDL A+ R S++ S
Sbjct: 57 TKRRYDQQKPANSYVRTTINKNGLATLSSIRHMIRKNKYRPDLRMEAILRASAILQS 113
>ref|XP_503934.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79527.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 183
Score = 58.9 bits (141), Expect = 3e-07
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = -1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
+M V D IW+ + N++LVK+ G +++P L N+ + SGL++ K V +
Sbjct: 44 KMTNVSNDFIWECTKSTNAYLVKRKG---IDTTLSRDPYALNNLSTHYESGLSHDKAVGV 100
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMR--KEFRKMAKAVKNQVSDNYYRPDLTKP 464
+ + T K N PAK H + K R +AKAV V Y+ +
Sbjct: 101 HYCKPSGKICVITKVVKNANKPAKSRHIVEFKPTKSSRAIAKAVSKTVQG--YKDEQIYD 158
Query: 463 ALARLSSVYLSLQVAKSGVKKKNR 392
A+ R S++ + V+K +NR
Sbjct: 159 AIVRASAIKRAATVSKKQFAARNR 182
>ref|NP_506180.1| Ribosomal Protein, Large subunit family member (rpl-28)
[Caenorhabditis elegans]
emb|CAA99898.1| Hypothetical protein R11D1.8 [Caenorhabditis elegans]
sp|Q21930|RL28_CAEEL 60S ribosomal protein L28
Length = 126
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/131 (35%), Positives = 68/131 (51%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L+WQV+R N++FL Q G G +F+ E NL ++S K+SGLANK + + AAK
Sbjct: 5 LVWQVIRNNSAFLRTQRGIGK---RFSTEKFNLKKVNSPKYSGLANKHAIDVSAAAK--G 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ST K + A K+V K A +++ N K A R +++
Sbjct: 60 VVVSTKNEKGRPA------KAVTTSTLSKTPVASVRRLAKNAGFNKFNKLAQRRAAAIVR 113
Query: 433 SLQVAKSGVKK 401
S QV K+ V+K
Sbjct: 114 S-QVKKAKVQK 123
>gb|AAY66859.1| ribosomal protein L28 [Ixodes scapularis]
Length = 141
Score = 56.2 bits (134), Expect = 2e-06
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W VV+ + FLVK+ K F+ +P N H+ ++SG K +T++P +
Sbjct: 4 DLKWMVVKDRSCFLVKK---RMIKTWFSTDPLNPKGTHAKRYSGTVLNKALTVEPHSTGK 60
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDN-YYRPDLTKPALARLSSV 440
V L K ++ P K + +RK R+ ++K V + YR DL L R S++
Sbjct: 61 GVNLVYKKQNRRKKPIKSLDRVPLRKGARRTMSSIKKWVKGHRNYRRDLQMLCLRRASAI 120
Query: 439 YLSLQVAKSGVKKKNRQS 386
S + KKKN ++
Sbjct: 121 LRSQKAIVP--KKKNTRT 136
>ref|XP_512911.1| PREDICTED: similar to ribosomal protein L28; 60S ribosomal protein
L28 [Pan troglodytes]
Length = 217
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = -1
Query: 682 SFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQ 503
SF+++GL ++KTV ++PAA VV+ + Q PA ++ + K R ++++
Sbjct: 117 SFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHM 176
Query: 502 VSDNYYRPDLTKPALARLSSVYLS 431
+ N YRPDL A+ R S++ S
Sbjct: 177 IRKNKYRPDLRMAAIRRASAILRS 200
>emb|CAE63977.1| Hypothetical protein CBG08569 [Caenorhabditis briggsae]
Length = 126
Score = 53.9 bits (128), Expect = 9e-06
Identities = 44/131 (33%), Positives = 65/131 (49%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L+WQV+R N++F+ Q G G +F+ E NL ++S K+SGLANK + + A K
Sbjct: 5 LVWQVIRNNSAFIRTQRGIGK---RFSTEKFNLKKVNSPKYSGLANKHAIDVSAAPK--G 59
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VV+ST K + A K+V K A ++ N K A R ++ Y+
Sbjct: 60 VVVSTKNEKGRPA------KAVATATLSKTPVASVRSLAKNTGFSKFQKLA-QRRAAAYV 112
Query: 433 SLQVAKSGVKK 401
QV K+ V K
Sbjct: 113 RSQVKKTKVPK 123
>emb|CAF89608.1| unnamed protein product [Tetraodon nigroviridis]
Length = 70
Score = 53.5 bits (127), Expect = 1e-05
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -1
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
L W V+R +SFL+K+ G ++ EPNNL +SF+ +GL +KKTV +QPAA
Sbjct: 5 LQWMVIRNCSSFLIKRNGQ-----TYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGKG 59
Query: 613 VVLSTTKTK 587
+V+ K +
Sbjct: 60 IVVVLKKRR 68
>dbj|BAD92864.1| ribosomal protein L28 variant [Homo sapiens]
Length = 95
Score = 52.4 bits (124), Expect = 2e-05
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -1
Query: 811 ATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQP 632
A + L W VVR +SFL+K+ K ++ EPNNL +SF+++GL ++KTV ++P
Sbjct: 7 AAMSAHLQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEP 61
Query: 631 AAKDSAVVL 605
AA VV+
Sbjct: 62 AADGKGVVV 70
>ref|XP_763632.1| 60S ribosomal protein L28 [Theileria parva strain Muguga]
gb|EAN31349.1| 60S ribosomal protein L28, putative [Theileria parva]
Length = 140
Score = 47.8 bits (112), Expect = 6e-04
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = -1
Query: 808 TVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPA 629
TVP L+W+++R N++FL K + F+ E +NL + H + +G NK + +
Sbjct: 15 TVPDCLLWELLRNNHAFLKK-----SRTTTFSLESHNLLSRHCPRFTGYTNKPSYNVVLN 69
Query: 628 AKDSAVVLSTTKTKKQNAP-AKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTK 467
+ S V K P +K+S K++++ K+ +VK V + RPDLT+
Sbjct: 70 STASLVTFKKNNLKNSRRPSSKISVKTLIKS--LKLLDSVKTTVRKD--RPDLTE 120
>ref|XP_828692.1| 60S ribosomal protein L28 [Trypanosoma brucei TREU927]
ref|XP_828694.1| 60S ribosomal protein L28 [Trypanosoma brucei TREU927]
gb|EAN79582.1| 60S ribosomal protein L28, putative [Trypanosoma brucei]
gb|EAN79580.1| 60S ribosomal protein L28, putative [Trypanosoma brucei]
Length = 146
Score = 47.8 bits (112), Expect = 6e-04
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W +VR+N+ FL K+ G ++ + +P N + + SG N K I+ K
Sbjct: 6 DLQWLLVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRQSGFLNTKAAVIK--TKGD 58
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 437
++L+T N P + K+VM + + VK V+D RPDL K A R +
Sbjct: 59 RILLTTKSGDTNNKPKLMYKKTVMEPGVK--SSVVKRAVAD--IRPDLAKMAYRRARKMA 114
Query: 436 LSL-QVAKSGVKKKNRQS 386
++ ++ K +K R S
Sbjct: 115 CTITRMKKVCAARKERSS 132
>ref|XP_821217.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
gb|EAN99366.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
Length = 146
Score = 44.7 bits (104), Expect = 0.005
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W VVR+N+ FL K+ G ++ + +P N + +H+G N K ++ K
Sbjct: 6 DLQWLVVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVK--TKGD 58
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRK--EFRKMAKAVKNQVSDNYYRPDLTKPALARLSS 443
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 59 RILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASIASRRARK 112
Query: 442 VYLSLQ-VAKSGVKKKNRQS 386
+ +L+ + K +K R S
Sbjct: 113 MASTLEHMKKVRAARKERSS 132
>emb|CAJ02970.1| 60S ribosomal protein L28, putative [Leishmania major]
emb|CAJ02962.1| 60S ribosomal protein L28, putative [Leishmania major]
Length = 147
Score = 43.9 bits (102), Expect = 0.009
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W +VR+N+ FL K+ G ++ + +P N + +H G N+K ++P AK
Sbjct: 6 DLQWVLVRQNSRFLQKRGG-----IRMSNDPFNNNGNWTKRHCGFLNEKAAVVKP-AKGG 59
Query: 616 AVVLSTTKTKKQNAPAKLSHKS-----VMRKEFRKMAKAVKNQVSDNYYRPDLTKPALAR 452
A+ ++ N P + K+ V + + AV+ ++D +R +A
Sbjct: 60 AICVTVKDGSSNNKPRQTYKKTVHAAGVRASDVSRAVAAVRPDLADVSFRRARRMACIAS 119
Query: 451 LSSVYLSLQVAKSGVKKKNRQS 386
++ + + A+S K +R+S
Sbjct: 120 RTAKVAAARKARSEKIKFSRKS 141
>ref|XP_820211.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
sp|O00822|RL28_TRYCR 60S ribosomal protein L28
gb|EAN98360.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
dbj|BAA22425.1| ribosomal protein L28 [Trypanosoma cruzi]
Length = 146
Score = 43.5 bits (101), Expect = 0.012
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W +VR+N+ FL K+ G ++ + +P N + +H+G N K ++ K
Sbjct: 6 DLQWLLVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVK--TKGD 58
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRK--EFRKMAKAVKNQVSDNYYRPDLTKPALARLSS 443
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 59 RILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASIASRRARK 112
Query: 442 VYLSLQ-VAKSGVKKKNRQS 386
+ +L+ + K +K R S
Sbjct: 113 MASTLEHMKKVRAARKERSS 132
>ref|XP_821218.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
gb|EAN99367.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
Length = 146
Score = 43.5 bits (101), Expect = 0.012
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DL W V R+N+ FL K+ G ++ + +P N + +H+G N K ++ K
Sbjct: 6 DLQWLVARQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVK--TKGD 58
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRK--EFRKMAKAVKNQVSDNYYRPDLTKPALARLSS 443
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 59 RILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASVASRRARK 112
Query: 442 VYLSLQ-VAKSGVKKKNRQS 386
+ +L+ + K +K R S
Sbjct: 113 MASTLEHMKKVRAARKERSS 132
>ref|XP_655185.1| MAK16 protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL49798.1| MAK16 protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 264
Score = 40.8 bits (94), Expect = 0.075
Identities = 36/135 (26%), Positives = 60/135 (44%)
Frame = -1
Query: 796 DLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDS 617
DLIW + + GN F + NN+ + LAN TI+ +
Sbjct: 5 DLIWIQCQHGFCSFKTKACTGN----FCRNRNNVMGECRRLYCPLANSVYATIREFGGN- 59
Query: 616 AVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 437
V L T ++ + PAKL +K ++ K++ K + V + ++D Y P L RL+ VY
Sbjct: 60 -VYLFTKSIERAHTPAKLWNKLLLDKDYMKALQQVTDTLTDE-YNPKLVHRVKQRLTKVY 117
Query: 436 LSLQVAKSGVKKKNR 392
L+ + + K+R
Sbjct: 118 QYLERERKLTQSKDR 132
>emb|CAI75800.1| 60S ribosomal protein l28, putative [Theileria annulata]
ref|XP_955276.1| 60S ribosomal protein L28 [Theileria annulata strain Ankara]
Length = 150
Score = 40.8 bits (94), Expect = 0.075
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Frame = -1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHS---------- 668
+ TVP L+W++VR N++FL K + F+ E +NL + HS + +
Sbjct: 12 QSGTVPDCLLWELVRNNHAFLKK-----SRTTTFSLESHNLLSKHSPRFTVLTQFCITFV 66
Query: 667 GLANKKTVTIQPAAKDSAVVLSTTKTKKQNAP-AKLSHKSVMRKEFRKMAKAVKNQVSDN 491
G NK + + + S + L + + P +K S KS+ K+ ++ ++K+ V +
Sbjct: 67 GYTNKTSYDVVLNSTGSLITLKRSNVRNSRRPSSKTSVKSL--KKSLELVNSLKSTVKKD 124
Query: 490 YYRPDL 473
RPDL
Sbjct: 125 --RPDL 128
>ref|XP_522512.1| PREDICTED: similar to KM-102-derived reductase-like factor [Pan
troglodytes]
Length = 1162
Score = 37.0 bits (84), Expect = 1.1
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = -1
Query: 766 NSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTK 587
+SFL+K+ K ++ PNNL + F ++GL +KTV ++PAA + ++ K
Sbjct: 156 SSFLIKR-----NKQTYSTVPNNLKACNCFHYNGLIQRKTVGVEPAAHGKSFIV-VKKRS 209
Query: 586 KQNAPAKLSHKSVMRK 539
Q PA S M++
Sbjct: 210 SQWKPATFYPLSEMQQ 225
>ref|NP_701295.1| hypothetical protein PF11_0437 [Plasmodium falciparum 3D7]
gb|AAN36019.1| hypothetical protein PF11_0437 [Plasmodium falciparum 3D7]
Length = 127
Score = 36.6 bits (83), Expect = 1.4
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
M+ V L+W++ RK+N F+ K K F +P N+ ++ SGL + +
Sbjct: 1 MSNVSNALVWELTRKSNCFIKK--NKAGKKGVFLCDPLNVNYKNTPSSSGLVKSNSTNV- 57
Query: 634 PAAKDSAVVLSTTKTKKQN 578
KD VV S +K+ N
Sbjct: 58 -TLKDGKVVFSVKTSKESN 75
>ref|XP_679451.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH98433.1| conserved hypothetical protein [Plasmodium berghei]
Length = 74
Score = 36.6 bits (83), Expect = 1.4
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = -1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MA + G L+W++ + NN FL + K + +P NL ++ SGL N V I+
Sbjct: 1 MANISGALVWELTKNNNCFLKR--NKTGKKEKLLCDPYNLRCKNTKNSSGLVNDNAVNIR 58
Query: 634 PAAKDSAVVLSTTKTKK 584
K V+ + TKK
Sbjct: 59 -LNKGKVVLCVKSTTKK 74
>gb|AAO59038.1| type III effector HopX1 [Pseudomonas syringae pv. tomato str.
DC3000]
gb|AAK49537.1| unknown [Pseudomonas syringae pv. maculicola]
gb|AAO53315.1| AvrPphE [Pseudomonas syringae pv. tomato]
ref|NP_114195.1| hypothetical protein [Pseudomonas syringae pv. maculicola]
ref|NP_808672.1| type III effector HopX1 [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 384
Score = 35.4 bits (80), Expect = 3.1
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Frame = -1
Query: 811 ATVPGDLIWQVVRKNNS----FLVKQFGNGNA----KVQFTKEPNNLYNIHSFKHSGLAN 656
A+ D +W ++ S ++ + NG+A +F K N + +F S A
Sbjct: 212 ASTEEDHVWAETDESQSGTSTIVMDPWSNGSAIFAEDSRFAKNRNAVERTDTFNLSTAAE 271
Query: 655 KKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRK----MAKAVKNQVSDNY 488
+T + A K A+ TT+ +K+ A + + +R + A +VSD
Sbjct: 272 AGKITRETAEK--ALTQVTTRLQKRLADQQEQVSPIKSGRYRPEKSVLDDAFVRRVSDKL 329
Query: 487 YRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS 386
PDL + + +V +++ + GVK RQ+
Sbjct: 330 TSPDLRRALQVDIEAVGVAMSLGTKGVKDATRQA 363
>emb|CAG13061.1| unnamed protein product [Tetraodon nigroviridis]
Length = 398
Score = 35.0 bits (79), Expect = 4.1
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 4/168 (2%)
Frame = +1
Query: 103 FTEPIKNVITSASHDKQVYKQSTIKRQTICHRM---THSNEAVITKCKAIFLRNDTQQHL 273
F E ++ IT + +Q++ Q K + +C R TH++ + C + N Q
Sbjct: 243 FAEELREAITEVNEMEQIHIQC--KEERLCARSLSHTHTHTQINQCCSGWAVENPVLQ-- 298
Query: 274 NMVCSVLTSLKTVGT*INISWDYEHQHAP*Q-NTNLALRTACSSS*HRTWQPGG*GTPSS 450
S T T + + W + AP Q N L ++ A +++ R G
Sbjct: 299 GSWRGNKASSHTAYTPMAVKWTHTQDTAPLQANRILMIKVAVTTTLSRCQFTTGC----- 353
Query: 451 A*QELAWSDQACSSCH*PGFSQPWPSCGTPCASQTCG*ASQVRSASWS 594
+ + W+ A S CH P P P C P + T ++Q S+S S
Sbjct: 354 --RPINWASPAMSPCHWPWL--PHPPCSAPSSPGT---SAQKHSSSAS 394
>ref|XP_792350.1| PREDICTED: similar to CG32030-PA, isoform A, partial
[Strongylocentrotus purpuratus]
Length = 750
Score = 35.0 bits (79), Expect = 4.1
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 799 GDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPA--- 629
G LIW+ R ++ + + + + Y S + + + +KT +PA
Sbjct: 144 GCLIWKRRRNRDTDSESVASTDTTETKKDEPTMSAYVPRSRRRAEVVEEKTPEEKPADKP 203
Query: 628 AKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARL 449
A+D++ S+ +T + + ++ S K+V KE +K + V + +PD TK +
Sbjct: 204 AEDTSSTKSSERTPRDRSTSESSDKTVENKELKK-----PDYVKE---KPDETKVVNGDI 255
Query: 448 SSVYLSLQVAKSGVKKKNRQ 389
SSV+ + ++ K ++R+
Sbjct: 256 SSVHKPKEAVETKAKDESRE 275
>ref|ZP_00420382.1| hypothetical protein Bcep1808DRAFT_6875 [Burkholderia vietnamiensis
G4]
gb|EAM32879.1| hypothetical protein Bcep1808DRAFT_6875 [Burkholderia vietnamiensis
G4]
Length = 355
Score = 35.0 bits (79), Expect = 4.1
Identities = 26/82 (31%), Positives = 38/82 (46%)
Frame = -1
Query: 661 ANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYR 482
A K T T +P+A + S TKTK Q+ K+ V + A AV Q D+
Sbjct: 23 ATKVTKTAKPSASAKSSAKSGTKTKPQSVVGKIVRAGVSPRRAASRADAVGRQPKDD-PA 81
Query: 481 PDLTKPALARLSSVYLSLQVAK 416
P K AL+++ + L Q A+
Sbjct: 82 PTRRKRALSQVEAAQLRWQEAE 103
>ref|NP_941066.2| TBC1 domain family, member 2 [Mus musculus]
Length = 922
Score = 34.7 bits (78), Expect = 5.4
Identities = 21/102 (20%), Positives = 47/102 (46%)
Frame = -1
Query: 715 TKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKE 536
T++P N F GLA +T + AA + V++ T + K Q + HK++ +
Sbjct: 284 TQKPKRQSNTFPFFSDGLARSRTAQEKVAALEQQVLMLTKELKSQKELVIILHKALEAAQ 343
Query: 535 FRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSG 410
K A + +++ R +L + + +++ + ++ + G
Sbjct: 344 QEKRASSAYLAATEDRDRLELVRHKVRQIAELNQRVEALEQG 385
>dbj|BAE28440.1| unnamed protein product [Mus musculus]
Length = 773
Score = 34.7 bits (78), Expect = 5.4
Identities = 21/102 (20%), Positives = 47/102 (46%)
Frame = -1
Query: 715 TKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKE 536
T++P N F GLA +T + AA + V++ T + K Q + HK++ +
Sbjct: 284 TQKPKRQSNTFPFFSDGLARSRTAQEKVAALEQQVLMLTKELKSQKELVIILHKALEAAQ 343
Query: 535 FRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSG 410
K A + +++ R +L + + +++ + ++ + G
Sbjct: 344 QEKRASSAYLAATEDRDRLELVRHKVRQIAELNQRVEALEQG 385
>emb|CAE66705.1| Hypothetical protein CBG12050 [Caenorhabditis briggsae]
Length = 4856
Score = 34.3 bits (77), Expect = 7.0
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 13 GNIKKRYKGYC*K*FKHAL-VQDTNPVYRILFTEPIKNVITSASHDKQVYKQSTIKRQTI 189
GNI K +K + K K+ ++D P R+L P K+ ++ +H K + +T+
Sbjct: 4209 GNIHKMHK-FSGKTNKYPQRIRDVAPRIRLLIAHPSKHTVSHITHQKNPCQSDYCPSETV 4267
Query: 190 CHRMTHSNEAVITKC 234
C +N +I KC
Sbjct: 4268 CIPKEDTNGVLIPKC 4282
>gb|EAS07440.1| hypothetical protein TTHERM_00571760 [Tetrahymena thermophila SB210]
Length = 1563
Score = 34.3 bits (77), Expect = 7.0
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Frame = -1
Query: 700 NLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQN--------------APAKL 563
N YN S+K + KK + DS+++ TTK +KQN A L
Sbjct: 1254 NHYNAFSYKQFIMNMKKNL-------DSSLIKETTKKQKQNDSFIKKVQTNKKPIATGNL 1306
Query: 562 SH-KSVMRKEFRKMAKAVKNQVSDNYYRP 479
+ K+ K+F K+ K + Q+ N RP
Sbjct: 1307 QNDKNSQNKDFEKLNKLIDQQIQKNVIRP 1335
>gb|AAA96110.3| Prion-like-(q/n-rich)-domain-bearing protein protein 13
[Caenorhabditis elegans]
ref|NP_504494.2| Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-13)
[Caenorhabditis elegans]
Length = 572
Score = 34.3 bits (77), Expect = 7.0
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Frame = -3
Query: 779 CEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDPASCKGLGCGPLY 600
C + + C+ +Q Q + +QP Q+ +Q Q+ C C C
Sbjct: 422 CVQACIPSCQQTCGQQAQPVIV--VQQPQQNNCVQACQPQCQQTCGSNVQCVS-AC---- 474
Query: 599 YQDQEAERTC--EAQPQVCDAQGVPQDGQGCEKPG*XXXXXXXXXXXXXXXAELGVPQ-P 429
+++C + Q QV Q P GQ C+ P VPQ
Sbjct: 475 --QNSCQQSCGNQQQQQVIVVQSSPMCGQACQAPPVLQC----------------VPQCQ 516
Query: 428 PGCQVRCQEEEQAVLSAKFVFCQ---GACWC 345
P CQ C ++ Q + + CQ G+C C
Sbjct: 517 PSCQPSCMQQYQFIQAPAITMCQQSGGSCGC 547
>emb|CAG58929.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_446005.1| unnamed protein product [Candida glabrata]
Length = 310
Score = 33.9 bits (76), Expect = 9.1
Identities = 21/98 (21%), Positives = 43/98 (43%)
Frame = -1
Query: 805 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 626
V DLIW ++ N+ F + + F ++P N+ + + + LAN K T++
Sbjct: 3 VSDDLIWDII--NHGFCATKIKTKVGQT-FDRDPYNVTGLFTRQSCPLANSKYATVREYG 59
Query: 625 KDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAV 512
+ L ++ + PAK+ + + + K K +
Sbjct: 60 DKGRLYLCIKTPERAHTPAKMWQRIRLSNNYSKALKQI 97
>gb|AAN52341.1| AvrPphEPsmM6 [Pseudomonas syringae pv. maculicola]
gb|AAN52338.1| AvrPphEPsmM6 [Pseudomonas syringae pv. maculicola]
Length = 384
Score = 33.9 bits (76), Expect = 9.1
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Frame = -1
Query: 811 ATVPGDLIWQVVRKNNS----FLVKQFGNGNA----KVQFTKEPNNLYNIHSFKHSGLAN 656
A+ D +W ++ S ++ NG+A +F K N + +F S A
Sbjct: 212 ASTEEDHVWAETDESQSGTSTIVMDPRSNGSAIFAEDSRFAKNRNAVERTDTFNLSTAAE 271
Query: 655 KKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRK----MAKAVKNQVSDNY 488
+T + A K A+ TT+ +K+ A + + +R + A +VSD
Sbjct: 272 AGKITRETAEK--ALTQVTTRLQKRLADQQEQVSPIKSGRYRPEKSVLDDAFVRRVSDKL 329
Query: 487 YRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS 386
PDL + + +V +++ + GVK RQ+
Sbjct: 330 TSPDLRRALQVDIEAVGVAMSLGTKGVKDATRQA 363
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,979,389,123
Number of Sequences: 3454138
Number of extensions: 43127169
Number of successful extensions: 123878
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 115852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123727
length of database: 1,185,965,366
effective HSP length: 129
effective length of database: 740,381,564
effective search space used: 130307155264
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)