BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QCM14d12.yg.2.1 (593 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13178381|gb|BG349639.1|BG349639 947031F11.y2 947 - 2 week sho... 96 6e-18 gi|22491571|gb|BU051494.1|BU051494 1111044E07.y1 1111 - Unigene ... 96 6e-18 gi|19351056|gb|BM895588.1|BM895588 952075F04.y1 952 - BMS tissue... 90 4e-16 gi|60220931|emb|CS020277.1| Sequence 13 from Patent WO2005012516 88 1e-15 gi|9622881|gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 ... 82 9e-14 gi|21214162|gb|AY110079.1| Zea mays CL1164_1 mRNA sequence 82 9e-14 gi|21214162|gb|AY110079.1| Zea mays CL1164_1 mRNA sequence 82 9e-14 gi|9622881|gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 ... 82 9e-14 gi|9622885|gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 ... 80 4e-13 gi|21206733|gb|AY103655.1| Zea mays PCO096398 mRNA sequence 80 4e-13 gi|60220959|emb|CS020313.1| Sequence 49 from Patent WO2005012516 80 4e-13 gi|21206733|gb|AY103655.1| Zea mays PCO096398 mRNA sequence 80 4e-13 gi|9622885|gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 ... 80 4e-13 gi|9622887|gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 ... 72 9e-11 gi|21206779|gb|AY103701.1| Zea mays PCO120363 mRNA sequence 72 9e-11 gi|60220934|emb|CS020281.1| Sequence 17 from Patent WO2005012516 72 9e-11 gi|21206779|gb|AY103701.1| Zea mays PCO120363 mRNA sequence 72 9e-11 gi|9622887|gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 ... 72 9e-11 gi|6601686|gb|AW256082.1|AW256082 687054D10.y1 687 - Early embry... 56 5e-06 gi|9622883|gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 ... 56 5e-06 gi|21207808|gb|AY104730.1| Zea mays PCO100501 mRNA sequence 56 5e-06 gi|60220953|emb|CS020305.1| Sequence 41 from Patent WO2005012516 56 5e-06 gi|21207808|gb|AY104730.1| Zea mays PCO100501 mRNA sequence 56 5e-06 gi|9622883|gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 ... 56 5e-06 gi|13178380|gb|BG349638.1|BG349638 947031F11.y1 947 - 2 week sho... 54 2e-05 gi|31358338|gb|CD442695.1|CD442695 EL01N0414H02.b Endosperm_4 Ze... 54 2e-05 gi|9622873|gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 ... 52 8e-05 gi|9622875|gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 ... 52 8e-05 gi|21214824|gb|AY110415.1| Zea mays CL1166_1 mRNA sequence 52 8e-05 gi|60220956|emb|CS020309.1| Sequence 45 from Patent WO2005012516 52 8e-05 gi|60220922|emb|CS020265.1| Sequence 1 from Patent WO2005012516 52 8e-05 gi|21214824|gb|AY110415.1| Zea mays CL1166_1 mRNA sequence 52 8e-05 gi|9622875|gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 ... 52 8e-05 gi|9622873|gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 ... 52 8e-05 gi|32943123|gb|CF047942.1|CF047942 QCL15e09.yg QCL Zea mays cDNA... 48 0.001 gi|87156952|gb|DY401741.1|DY401741 V-946-6A-G05.Gal4-R UGV-Reseq... 48 0.001 gi|9622877|gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 ... 48 0.001 gi|21207314|gb|AY104236.1| Zea mays PCO121439 mRNA sequence 48 0.001 gi|60220925|emb|CS020269.1| Sequence 5 from Patent WO2005012516 48 0.001 gi|21207314|gb|AY104236.1| Zea mays PCO121439 mRNA sequence 48 0.001 gi|18129038|emb|AX338676.1| Sequence 1 from Patent WO0179516 48 0.001 gi|9622877|gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 ... 48 0.001 gi|26559388|gb|CA831623.1|CA831623 1117021G05.y1 1117 - Unigene ... 42 0.078 gi|32830444|gb|CD970122.1|CD970122 QAD12d01.sg QAD Zea mays cDNA... 42 0.078 gi|67017292|gb|CO446041.1|CO446041 MZCCL10118G04.g Maize Endospe... 42 0.078 gi|33093679|gb|CF053673.1|CF053673 QCN1a09.yg QCN Zea mays cDNA ... 40 0.31 gi|67018193|gb|CO446942.1|CO446942 MZCCL10113E07.g Maize Endospe... 40 0.31 gi|9622889|gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 ... 40 0.31 gi|60220937|emb|CS020285.1| Sequence 21 from Patent WO2005012516 40 0.31 gi|18129042|emb|AX338680.1| Sequence 5 from Patent WO0179516 40 0.31 gi|9622889|gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 ... 40 0.31 gi|9622879|gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 ... 38 1.2 gi|21211191|gb|AY108113.1| Zea mays PCO126465 mRNA sequence 38 1.2 gi|60220928|emb|CS020273.1| Sequence 9 from Patent WO2005012516 38 1.2 gi|21211191|gb|AY108113.1| Zea mays PCO126465 mRNA sequence 38 1.2 gi|9622879|gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 ... 38 1.2 gi|37361120|gb|CF602409.1|CF602409 EST3482 Zea mays sperm cell c... 36 4.8 gi|50324777|gb|CO519903.1|CO519903 3530_1_131_1_A11.x_1 3530 - F... 36 4.8 gi|71330967|gb|DR802298.1|DR802298 ZM_BFb0026I03.f ZM_BFb Zea ma... 36 4.8 gi|76917766|gb|DV166996.1|DV166996 ZM_BFb0164N06.r ZM_BFb Zea ma... 36 4.8 gi|88751214|gb|DY535355.1|DY535355 ZM_BFb0267K01.f ZM_BFb Zea ma... 36 4.8 gi|91053440|gb|EB163858.1|EB163858 ZM_BFb0311P04.r ZM_BFb Zea ma... 36 4.8 gi|92899811|gb|AC185429.1| Zea mays chromosome UNK clone CH201-4... 36 4.8 gi|89365855|gb|AC183589.1| Zea mays chromosome UNK clone ZMMBBb-... 36 4.8 gi|62123037|gb|AC149633.4| Zea mays chromosome 9L clone ZMMBBc05... 36 4.8 gi|58531548|gb|AC149478.3| Zea mays clone ZMMBBb0336K06, *** SEQ... 36 4.8 >gi|13178381|gb|BG349639.1|BG349639 947031F11.y2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 525 Score = 95.6 bits (48), Expect = 6e-18 Identities = 150/185 (81%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| ||||||| |||||| || |||| ||||||||| Sbjct: 285 tcaattttctgagcaaagtaccattccggagccctaggctctatgttgtacttcttacag 226 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 225 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 166 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 165 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 106 Query: 538 atgga 542 ||||| Sbjct: 105 atgga 101 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 357 aattcttcatattctctcttcatggcccggcgttct 322 >gi|22491571|gb|BU051494.1|BU051494 1111044E07.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 581 Score = 95.6 bits (48), Expect = 6e-18 Identities = 150/185 (81%) Strand = Plus / Plus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| ||||||| |||||| || |||| ||||||||| Sbjct: 390 tcaattttctgagcaaagtaccattccggagccctaggctctatgttgtacttcttacag 449 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 450 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 509 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 510 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 569 Query: 538 atgga 542 ||||| Sbjct: 570 atgga 574 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Plus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 318 aattcttcatattctctcttcatggcccggcgttct 353 >gi|19351056|gb|BM895588.1|BM895588 952075F04.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 543 Score = 89.7 bits (45), Expect = 4e-16 Identities = 120/145 (82%) Strand = Plus / Plus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| ||||||| |||||| || |||| ||||||||| Sbjct: 399 tcaattttctgagcaaagtaccattccggagccctaggctctatgttgtacttcttacag 458 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 459 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 518 Query: 478 gcagcaccatcatccgacacatagc 502 ||||| ||||||||||| ||||||| Sbjct: 519 gcagctccatcatccgaaacatagc 543 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Plus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 327 aattcttcatattctctcttcatggcccggcgttct 362 >gi|60220931|emb|CS020277.1| Sequence 13 from Patent WO2005012516 Length = 3704 Score = 87.7 bits (44), Expect = 1e-15 Identities = 149/185 (80%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| || |||| |||||| || |||| ||||||||| Sbjct: 1578 tcaattttctgagcaaagtaccattccggggccctaggctctatgttgtacttcttacag 1519 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 1518 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 1459 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 1458 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 1399 Query: 538 atgga 542 ||||| Sbjct: 1398 atgga 1394 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 1650 aattcttcatattctctcttcatggcccggcgttct 1615 >gi|9622881|gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 81.8 bits (41), Expect = 9e-14 Identities = 148/185 (80%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| || ||| |||||| || |||| ||||||||| Sbjct: 1560 tcaattttctgagcaaagtaccattccggggccntaggctctatgttgtacttcttacag 1501 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 1500 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 1441 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 1440 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 1381 Query: 538 atgga 542 ||||| Sbjct: 1380 atgga 1376 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 1632 aattcttcatattctctcttcatggcccggcgttct 1597 >gi|21214162|gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 81.8 bits (41), Expect = 9e-14 Identities = 148/185 (80%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| || ||| |||||| || |||| ||||||||| Sbjct: 1560 tcaattttctgagcaaagtaccattccggggccntaggctctatgttgtacttcttacag 1501 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 1500 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 1441 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 1440 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 1381 Query: 538 atgga 542 ||||| Sbjct: 1380 atgga 1376 >gi|21214162|gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 81.8 bits (41), Expect = 9e-14 Identities = 148/185 (80%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| || ||| |||||| || |||| ||||||||| Sbjct: 1560 tcaattttctgagcaaagtaccattccggggccntaggctctatgttgtacttcttacag 1501 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 1500 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 1441 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 1440 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 1381 Query: 538 atgga 542 ||||| Sbjct: 1380 atgga 1376 >gi|9622881|gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 81.8 bits (41), Expect = 9e-14 Identities = 148/185 (80%) Strand = Plus / Minus Query: 358 tcaattttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacag 417 ||||||||||||||||| |||||||| || ||| |||||| || |||| ||||||||| Sbjct: 1560 tcaattttctgagcaaagtaccattccggggccntaggctctatgttgtacttcttacag 1501 Query: 418 aagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcatt 477 || ||||||||||||| ||||| | ||||| | || || |||||||| ||||| Sbjct: 1500 aacggaacccattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcata 1441 Query: 478 gcagcaccatcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagt 537 ||||| ||||||||||| |||||||| | || || ||||| ||||||| ||||| || Sbjct: 1440 gcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaagg 1381 Query: 538 atgga 542 ||||| Sbjct: 1380 atgga 1376 Score = 40.1 bits (20), Expect = 0.31 Identities = 32/36 (88%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtcgttct 321 |||||||| |||||||||||||| || || |||||| Sbjct: 1632 aattcttcatattctctcttcatggcccggcgttct 1597 >gi|9622885|gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 79.8 bits (40), Expect = 4e-13 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1392 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 1333 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 ||||||||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1332 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataat 1281 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 1768 caatgcattcatagcaccagctttcttatgatg 1736 >gi|21206733|gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 79.8 bits (40), Expect = 4e-13 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1405 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 1346 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 ||||||||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1345 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataat 1294 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 1781 caatgcattcatagcaccagctttcttatgatg 1749 >gi|60220959|emb|CS020313.1| Sequence 49 from Patent WO2005012516 Length = 3969 Score = 79.8 bits (40), Expect = 4e-13 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1393 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 1334 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 ||||||||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1333 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataat 1282 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 1769 caatgcattcatagcaccagctttcttatgatg 1737 >gi|21206733|gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 79.8 bits (40), Expect = 4e-13 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1405 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 1346 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 ||||||||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1345 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataat 1294 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 1781 caatgcattcatagcaccagctttcttatgatg 1749 >gi|9622885|gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 79.8 bits (40), Expect = 4e-13 Identities = 94/112 (83%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1392 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 1333 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 ||||||||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1332 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataat 1281 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 1768 caatgcattcatagcaccagctttcttatgatg 1736 >gi|9622887|gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 71.9 bits (36), Expect = 9e-11 Identities = 60/68 (88%) Strand = Plus / Minus Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518 ||||||||| ||||||||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 1443 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 1384 Query: 519 aggataat 526 ||||||| Sbjct: 1383 cggataat 1376 Score = 42.1 bits (21), Expect = 0.078 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcat 308 ||||| ||||| ||||||||||||||||| Sbjct: 1622 accttgaattcctcgtattctctcttcat 1594 >gi|21206779|gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 71.9 bits (36), Expect = 9e-11 Identities = 60/68 (88%) Strand = Plus / Minus Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518 ||||||||| ||||||||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 1427 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 1368 Query: 519 aggataat 526 ||||||| Sbjct: 1367 cggataat 1360 Score = 42.1 bits (21), Expect = 0.078 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcat 308 ||||| ||||| ||||||||||||||||| Sbjct: 1606 accttgaattcctcgtattctctcttcat 1578 >gi|60220934|emb|CS020281.1| Sequence 17 from Patent WO2005012516 Length = 3813 Score = 71.9 bits (36), Expect = 9e-11 Identities = 60/68 (88%) Strand = Plus / Minus Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518 ||||||||| ||||||||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 1444 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 1385 Query: 519 aggataat 526 ||||||| Sbjct: 1384 cggataat 1377 Score = 42.1 bits (21), Expect = 0.078 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcat 308 ||||| ||||| ||||||||||||||||| Sbjct: 1623 accttgaattcctcgtattctctcttcat 1595 >gi|21206779|gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 71.9 bits (36), Expect = 9e-11 Identities = 60/68 (88%) Strand = Plus / Minus Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518 ||||||||| ||||||||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 1427 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 1368 Query: 519 aggataat 526 ||||||| Sbjct: 1367 cggataat 1360 Score = 42.1 bits (21), Expect = 0.078 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcat 308 ||||| ||||| ||||||||||||||||| Sbjct: 1606 accttgaattcctcgtattctctcttcat 1578 >gi|9622887|gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 71.9 bits (36), Expect = 9e-11 Identities = 60/68 (88%) Strand = Plus / Minus Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518 ||||||||| ||||||||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 1443 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 1384 Query: 519 aggataat 526 ||||||| Sbjct: 1383 cggataat 1376 Score = 42.1 bits (21), Expect = 0.078 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcat 308 ||||| ||||| ||||||||||||||||| Sbjct: 1622 accttgaattcctcgtattctctcttcat 1594 >gi|6601686|gb|AW256082.1|AW256082 687054D10.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 296 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 273 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 214 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 213 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataat 162 >gi|9622883|gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1205 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 1146 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 1145 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaactggataat 1094 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 1340 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 1291 >gi|21207808|gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1438 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 1379 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 1378 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaactggataat 1327 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 1573 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 1524 >gi|60220953|emb|CS020305.1| Sequence 41 from Patent WO2005012516 Length = 3568 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1225 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 1166 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 1165 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaactggataat 1114 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 1360 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 1311 >gi|21207808|gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1438 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 1379 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 1378 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaactggataat 1327 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 1573 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 1524 >gi|9622883|gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 56.0 bits (28), Expect = 5e-06 Identities = 91/112 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 1205 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 1146 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526 || |||||||||||||| || || ||||| |||| |||||||| ||||||| Sbjct: 1145 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaactggataat 1094 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 1340 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 1291 >gi|13178380|gb|BG349638.1|BG349638 947031F11.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 235 Score = 54.0 bits (27), Expect = 2e-05 Identities = 66/80 (82%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| ||||| ||||||||||| |||||||| | || || ||||| ||| Sbjct: 174 tcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtcaaccgga 115 Query: 523 taatnnacagcnagtatgga 542 |||| ||||| || ||||| Sbjct: 114 taatcgacagcaaggatgga 95 >gi|31358338|gb|CD442695.1|CD442695 EL01N0414H02.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 612 Score = 54.0 bits (27), Expect = 2e-05 Identities = 138/176 (78%) Strand = Plus / Minus Query: 367 tgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacc 426 |||||||| |||||| | || |||| |||||| || ||| ||||||||||| |||||| Sbjct: 612 tgagcaaagtaccatcccggggccctaggctctatgctgtacttcttacagaacggaacc 553 Query: 427 cattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcattgcagcacca 486 ||||||| ||||| | ||||| | || || |||||||| ||||| ||||| ||| Sbjct: 552 cattttctagcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctcca 493 Query: 487 tcatccgacacatagcagcaaactttatcaacaggataatnnacagcnagtatgga 542 |||||||| |||||||| | || || ||||| ||||||| ||||| || ||||| Sbjct: 492 tcatccgaaacatagcaagataccttgtcaaccggataatcgacagcaaggatgga 437 >gi|9622873|gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | ||||||||| || |||||||| | ||||| |||||||| Sbjct: 1378 tcaaaagtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcaacaggg 1319 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| |||| || ||||||||||| |||| Sbjct: 1318 taatccacagaaagaatggacaaaacagtgt 1288 >gi|9622875|gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | |||||||| || |||||||| | ||||| |||||||| Sbjct: 1371 tcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacaggg 1312 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| ||||| || ||||||||||| |||| Sbjct: 1311 taatccacagcaagaatggacaaaacagtgt 1281 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtc 316 |||||||| || |||||||||||||| |||| Sbjct: 1548 aattcttcatactctctcttcattgctcgtc 1518 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 403 ttgtgtttcttacagaagggaacccattttc 433 ||||| |||||||| ||||||||||| |||| Sbjct: 1431 ttgtgcttcttacaaaagggaacccactttc 1401 >gi|21214824|gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | |||||||| || |||||||| | ||||| |||||||| Sbjct: 1384 tcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacaggg 1325 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| ||||| || ||||||||||| |||| Sbjct: 1324 taatccacagcaagaatggacaaaacagtgt 1294 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 403 ttgtgtttcttacagaagggaacccattttc 433 ||||| |||||||| ||||||||||| |||| Sbjct: 1444 ttgtgcttcttacaaaagggaacccactttc 1414 >gi|60220956|emb|CS020309.1| Sequence 45 from Patent WO2005012516 Length = 3725 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | |||||||| || |||||||| | ||||| |||||||| Sbjct: 1371 tcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacaggg 1312 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| ||||| || ||||||||||| |||| Sbjct: 1311 taatccacagcaagaatggacaaaacagtgt 1281 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtc 316 |||||||| || |||||||||||||| |||| Sbjct: 1548 aattcttcatactctctcttcattgctcgtc 1518 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 403 ttgtgtttcttacagaagggaacccattttc 433 ||||| |||||||| ||||||||||| |||| Sbjct: 1431 ttgtgcttcttacaaaagggaacccactttc 1401 >gi|60220922|emb|CS020265.1| Sequence 1 from Patent WO2005012516 Length = 3780 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | ||||||||| || |||||||| | ||||| |||||||| Sbjct: 1396 tcaaaagtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcaacaggg 1337 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| |||| || ||||||||||| |||| Sbjct: 1336 taatccacagaaagaatggacaaaacagtgt 1306 >gi|21214824|gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | |||||||| || |||||||| | ||||| |||||||| Sbjct: 1384 tcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacaggg 1325 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| ||||| || ||||||||||| |||| Sbjct: 1324 taatccacagcaagaatggacaaaacagtgt 1294 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 403 ttgtgtttcttacagaagggaacccattttc 433 ||||| |||||||| ||||||||||| |||| Sbjct: 1444 ttgtgcttcttacaaaagggaacccactttc 1414 >gi|9622875|gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | |||||||| || |||||||| | ||||| |||||||| Sbjct: 1371 tcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacaggg 1312 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| ||||| || ||||||||||| |||| Sbjct: 1311 taatccacagcaagaatggacaaaacagtgt 1281 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcattgcacgtc 316 |||||||| || |||||||||||||| |||| Sbjct: 1548 aattcttcatactctctcttcattgctcgtc 1518 Score = 38.2 bits (19), Expect = 1.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 403 ttgtgtttcttacagaagggaacccattttc 433 ||||| |||||||| ||||||||||| |||| Sbjct: 1431 ttgtgcttcttacaaaagggaacccactttc 1401 >gi|9622873|gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 52.0 bits (26), Expect = 8e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522 |||||||| ||||| || | ||||||||| || |||||||| | ||||| |||||||| Sbjct: 1378 tcaaaagtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcaacaggg 1319 Query: 523 taatnnacagcnagtatggacaaaactgtgt 553 |||| |||| || ||||||||||| |||| Sbjct: 1318 taatccacagaaagaatggacaaaacagtgt 1288 >gi|32943123|gb|CF047942.1|CF047942 QCL15e09.yg QCL Zea mays cDNA clone QCL15e09, mRNA sequence Length = 315 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Plus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 107 ggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaa 162 >gi|87156952|gb|DY401741.1|DY401741 V-946-6A-G05.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 768 Score = 48.1 bits (24), Expect = 0.001 Identities = 84/104 (80%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 117 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 58 Query: 475 attgcagcaccatcatccgacacatagcagcaaactttatcaac 518 || |||||||||||||| || || ||||| |||| |||||||| Sbjct: 57 atggcagcaccatcatcagaaacgtagcatgaaaccttatcaac 14 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 252 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 203 >gi|9622877|gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 (CesA-3) mRNA, partial cds Length = 2828 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 512 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 457 >gi|21207314|gb|AY104236.1| Zea mays PCO121439 mRNA sequence Length = 2872 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 534 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 479 >gi|60220925|emb|CS020269.1| Sequence 5 from Patent WO2005012516 Length = 2830 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 514 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 459 >gi|21207314|gb|AY104236.1| Zea mays PCO121439 mRNA sequence Length = 2872 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 534 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 479 >gi|18129038|emb|AX338676.1| Sequence 1 from Patent WO0179516 Length = 2830 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 514 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 459 >gi|9622877|gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 (CesA-3) mRNA, partial cds Length = 2828 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||||||||||| || |||||||||||||| | |||||| Sbjct: 512 ggagccctaggttcaatattgtgtttcttgcaaaagggaacccatttccttgcaaa 457 >gi|26559388|gb|CA831623.1|CA831623 1117021G05.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 412 Score = 42.1 bits (21), Expect = 0.078 Identities = 63/77 (81%) Strand = Plus / Minus Query: 415 cagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagc 474 ||||| ||||||||||| ||||||| | ||||||| | | ||||||||| || ||| Sbjct: 101 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 42 Query: 475 attgcagcaccatcatc 491 || |||||||||||||| Sbjct: 41 atggcagcaccatcatc 25 Score = 36.2 bits (18), Expect = 4.8 Identities = 42/50 (84%) Strand = Plus / Minus Query: 280 accttaaattcttcgtattctctcttcattgcacgtcgttctcgaacaaa 329 ||||| ||||| || || |||||||||||||| | ||||||| |||||| Sbjct: 236 accttgaattcctcatactctctcttcattgctctccgttctctaacaaa 187 >gi|32830444|gb|CD970122.1|CD970122 QAD12d01.sg QAD Zea mays cDNA clone QAD12d01, mRNA sequence Length = 556 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Plus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 420 caatgcattcatagcaccagctttcttatgatg 452 >gi|67017292|gb|CO446041.1|CO446041 MZCCL10118G04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 877 Score = 42.1 bits (21), Expect = 0.078 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 caatgcattcaaggcaccagcttttttatgatg 71 ||||||||||| ||||||||||| |||||||| Sbjct: 75 caatgcattcatagcaccagctttcttatgatg 43 >gi|33093679|gb|CF053673.1|CF053673 QCN1a09.yg QCN Zea mays cDNA clone QCN1a09, mRNA sequence Length = 206 Score = 40.1 bits (20), Expect = 0.31 Identities = 47/56 (83%) Strand = Plus / Plus Query: 385 ggagcccgaggctcgattttgtgtttcttacagaagggaacccattttcgtgcaaa 440 ||||||| ||| || || ||| ||||||| || |||||||||||||| | |||||| Sbjct: 107 ggagccctaggttcaatgttgagtttcttgcaaaagggaacccatttccttgcaaa 162 >gi|67018193|gb|CO446942.1|CO446942 MZCCL10113E07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 844 Score = 40.1 bits (20), Expect = 0.31 Identities = 56/68 (82%) Strand = Plus / Minus Query: 43 gcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaaca 102 ||||||| |||||||||||| || ||||| | |||||| | ||| ||||| |||||| Sbjct: 153 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 94 Query: 103 tagaccaa 110 |||||||| Sbjct: 93 tagaccaa 86 >gi|9622889|gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 40.1 bits (20), Expect = 0.31 Identities = 56/68 (82%) Strand = Plus / Minus Query: 43 gcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaaca 102 ||||||| |||||||||||| || ||||| | |||||| | ||| ||||| |||||| Sbjct: 1868 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 1809 Query: 103 tagaccaa 110 |||||||| Sbjct: 1808 tagaccaa 1801 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1625 aattcttcatattctctcttcat 1603 >gi|60220937|emb|CS020285.1| Sequence 21 from Patent WO2005012516 Length = 3799 Score = 40.1 bits (20), Expect = 0.31 Identities = 56/68 (82%) Strand = Plus / Minus Query: 43 gcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaaca 102 ||||||| |||||||||||| || ||||| | |||||| | ||| ||||| |||||| Sbjct: 1868 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 1809 Query: 103 tagaccaa 110 |||||||| Sbjct: 1808 tagaccaa 1801 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1625 aattcttcatattctctcttcat 1603 >gi|18129042|emb|AX338680.1| Sequence 5 from Patent WO0179516 Length = 3799 Score = 40.1 bits (20), Expect = 0.31 Identities = 56/68 (82%) Strand = Plus / Minus Query: 43 gcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaaca 102 ||||||| |||||||||||| || ||||| | |||||| | ||| ||||| |||||| Sbjct: 1868 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 1809 Query: 103 tagaccaa 110 |||||||| Sbjct: 1808 tagaccaa 1801 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1625 aattcttcatattctctcttcat 1603 >gi|9622889|gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 40.1 bits (20), Expect = 0.31 Identities = 56/68 (82%) Strand = Plus / Minus Query: 43 gcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaaca 102 ||||||| |||||||||||| || ||||| | |||||| | ||| ||||| |||||| Sbjct: 1868 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 1809 Query: 103 tagaccaa 110 |||||||| Sbjct: 1808 tagaccaa 1801 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1625 aattcttcatattctctcttcat 1603 >gi|9622879|gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1701 aattcttcatattctctcttcat 1679 >gi|21211191|gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1719 aattcttcatattctctcttcat 1697 >gi|60220928|emb|CS020273.1| Sequence 9 from Patent WO2005012516 Length = 3773 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1719 aattcttcatattctctcttcat 1697 >gi|21211191|gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1719 aattcttcatattctctcttcat 1697 >gi|9622879|gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 38.2 bits (19), Expect = 1.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 286 aattcttcgtattctctcttcat 308 |||||||| |||||||||||||| Sbjct: 1701 aattcttcatattctctcttcat 1679 >gi|37361120|gb|CF602409.1|CF602409 EST3482 Zea mays sperm cell cDNA library Zea mays cDNA clone Zmsp8605 5', mRNA sequence Length = 463 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 365 tctgagcaaaataccatt 382 |||||||||||||||||| Sbjct: 118 tctgagcaaaataccatt 135 >gi|50324777|gb|CO519903.1|CO519903 3530_1_131_1_A11.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 686 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 32 ttcgcagcaatgcattcaaggc 53 ||||||||||||| |||||||| Sbjct: 93 ttcgcagcaatgccttcaaggc 114 >gi|71330967|gb|DR802298.1|DR802298 ZM_BFb0026I03.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 469 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 32 ttcgcagcaatgcattcaaggc 53 ||||||||||||| |||||||| Sbjct: 93 ttcgcagcaatgccttcaaggc 114 >gi|76917766|gb|DV166996.1|DV166996 ZM_BFb0164N06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 745 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 330 ctctgggtgaaccttttctctt 351 ||||||||||||| |||||||| Sbjct: 693 ctctgggtgaaccatttctctt 714 >gi|88751214|gb|DY535355.1|DY535355 ZM_BFb0267K01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 726 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 32 ttcgcagcaatgcattcaaggc 53 ||||||||||||| |||||||| Sbjct: 93 ttcgcagcaatgccttcaaggc 114 >gi|91053440|gb|EB163858.1|EB163858 ZM_BFb0311P04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 752 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 32 ttcgcagcaatgcattcaaggc 53 ||||||||||||| |||||||| Sbjct: 6 ttcgcagcaatgccttcaaggc 27 >gi|92899811|gb|AC185429.1| Zea mays chromosome UNK clone CH201-479P12; ZMMBBc0479P12, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces Length = 134012 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 365 tctgagcaaaataccatt 382 |||||||||||||||||| Sbjct: 61732 tctgagcaaaataccatt 61749 >gi|89365855|gb|AC183589.1| Zea mays chromosome UNK clone ZMMBBb-620I24; ZMMBBb0620I24, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces Length = 150170 Score = 36.2 bits (18), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Minus Query: 254 aattagcagctactgtgtttat 275 |||||| ||||||||||||||| Sbjct: 4515 aattagtagctactgtgtttat 4494 >gi|62123037|gb|AC149633.4| Zea mays chromosome 9L clone ZMMBBc0534K21, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces Length = 116794 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 318 ttctcgaacaaactctgg 335 |||||||||||||||||| Sbjct: 2087 ttctcgaacaaactctgg 2070 >gi|58531548|gb|AC149478.3| Zea mays clone ZMMBBb0336K06, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces Length = 149228 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 318 ttctcgaacaaactctgg 335 |||||||||||||||||| Sbjct: 137291 ttctcgaacaaactctgg 137308 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 175,185 Number of Sequences: 836351 Number of extensions: 175185 Number of successful extensions: 13070 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 12849 Number of HSP's gapped (non-prelim): 217 length of query: 593 length of database: 669,372,029 effective HSP length: 19 effective length of query: 574 effective length of database: 653,481,360 effective search space: 375098300640 effective search space used: 375098300640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)