BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QCH22b04.yg.2.1 (457 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32934951|gb|CF039763.1|CF039763 QCH4a01.yg QCH Zea mays cDNA ... 898 0.0 gi|32933639|gb|CF038451.1|CF038451 QCH22b04.yg QCH Zea mays cDNA... 884 0.0 gi|76292260|gb|DV031828.1|DV031828 ZM_BFb0155F18.r ZM_BFb Zea ma... 712 0.0 gi|76911869|gb|DV164474.1|DV164474 ZM_BFb0160P05.r ZM_BFb Zea ma... 712 0.0 gi|76922593|gb|DV169076.1|DV169076 ZM_BFb0167P23.r ZM_BFb Zea ma... 712 0.0 gi|71435190|gb|DR816240.1|DR816240 ZM_BFb0047F16.r ZM_BFb Zea ma... 638 0.0 gi|61118986|gb|DN559947.1|DN559947 ME17-G09-T3-96-R1 E7PCR Zea m... 563 e-159 gi|93016145|gb|EB641665.1|EB641665 ZM_BFb0331G24.r ZM_BFb Zea ma... 418 e-115 gi|60340220|gb|DN207193.1|DN207193 MEST845_C04.T7-1 UGA-ZmSAM-XZ... 367 e-100 gi|33102506|gb|CF062466.1|CF062466 QCT9f10.yg QCT Zea mays cDNA ... 307 6e-82 gi|33103115|gb|CF063075.1|CF063075 QCU17c01.yg QCU Zea mays cDNA... 303 1e-80 gi|60351560|gb|DN218533.1|DN218533 MEST1068_B06.T7-1 UGA-ZmSAM-X... 272 4e-71 gi|32793976|gb|CD946212.1|CD946212 REK_21 GeneTag1 Zea mays cDNA... 250 1e-64 gi|76019438|gb|DT946608.1|DT946608 ZM_BFb0134G07.r ZM_BFb Zea ma... 212 3e-53 gi|168617|gb|M62985.1|MZESMDPK Maize putative protein kinase mRN... 194 7e-48 gi|168617|gb|M62985.1|MZESMDPK Maize putative protein kinase mRN... 194 7e-48 gi|37417440|gb|CF646373.1|CF646373 3530_1_112_1_H05.y_1 3530 - F... 186 2e-45 gi|78082965|gb|DV511358.1|DV511358 ZM_BFb0191H18.r ZM_BFb Zea ma... 186 2e-45 gi|78114667|gb|DV533055.1|DV533055 ZM_BFb0223P22.r ZM_BFb Zea ma... 184 6e-45 gi|21214380|gb|AY110216.1| Zea mays CL968_1 mRNA sequence 115 5e-24 gi|21214380|gb|AY110216.1| Zea mays CL968_1 mRNA sequence 115 5e-24 gi|32794010|gb|CD946246.1|CD946246 REK_83 GeneTag1 Zea mays cDNA... 113 2e-23 gi|28873862|gb|CB329794.1|CB329794 3529_1_23_1_G10.y_1 3529 - 2 ... 92 7e-17 gi|28930937|gb|CB334298.1|CB334298 3529_1_23_1_G10.y_2 3529 - 2 ... 92 7e-17 gi|91932924|gb|AC185226.1| Zea mays chromosome UNK clone CH201-4... 92 7e-17 gi|18661432|gb|BM501394.1|BM501394 PAC000000000709 Pioneer AF-1 ... 68 1e-09 gi|60401285|gb|DN234092.1|DN234092 MEST1187_C11.T7-1 UGA-ZmSAM-X... 68 1e-09 gi|67014920|gb|CO443669.1|CO443669 MZCCL10048C05.g Maize Endospe... 68 1e-09 gi|13490665|gb|BG517429.1|BG517429 947062E05.y1 947 - 2 week sho... 66 4e-09 gi|50323590|gb|CO518716.1|CO518716 3530_1_122_1_D02.y_1 3530 - F... 66 4e-09 gi|50334282|gb|CO529408.1|CO529408 3530_1_194_1_D08.y_1 3530 - F... 66 4e-09 gi|71768651|gb|DR966588.1|DR966588 ZM_BFb0087A10.r ZM_BFb Zea ma... 66 4e-09 gi|50326813|gb|CO521939.1|CO521939 3530_1_144_1_G09.x_1 3530 - F... 62 6e-08 gi|60357516|gb|DN224489.1|DN224489 MEST1159_H07.T7-1 UGA-ZmSAM-X... 62 6e-08 gi|71329909|gb|DR801673.1|DR801673 ZM_BFb0025J17.f ZM_BFb Zea ma... 62 6e-08 gi|71330360|gb|DR801934.1|DR801934 ZM_BFb0025P19.f ZM_BFb Zea ma... 62 6e-08 gi|78120214|gb|DV538598.1|DV538598 ZM_BFb0232B18.f ZM_BFb Zea ma... 62 6e-08 gi|86472324|gb|DY238694.1|DY238694 ZM_BFb0256L01.f ZM_BFb Zea ma... 62 6e-08 gi|60339555|gb|DN206528.1|DN206528 MEST835_E04.T7-1 UGA-ZmSAM-XZ... 60 3e-07 gi|89755055|gb|DY685617.1|DY685617 ZM_BFb0272C01.r ZM_BFb Zea ma... 60 3e-07 gi|91049137|gb|EB159555.1|EB159555 ZM_BFb0295H09.f ZM_BFb Zea ma... 54 2e-05 gi|20208261|gb|BQ134350.1|BQ134350 1091016A03.y2 1091 - Immature... 52 6e-05 gi|21987178|gb|BQ778706.1|BQ778706 946113F01.y1 946 - tassel pri... 52 6e-05 gi|21987322|gb|BQ778850.1|BQ778850 946114G01.y1 946 - tassel pri... 52 6e-05 gi|26456124|gb|CA827707.1|CA827707 1114018D03.y2 1114 - Unigene ... 52 6e-05 gi|26558297|gb|CA830532.1|CA830532 1117008E01.y1 1117 - Unigene ... 52 6e-05 gi|5268688|gb|AI770652.1|AI770652 606055F01.x2 606 - Ear tissue ... 44 0.015 gi|71317133|gb|DR795254.1|DR795254 ZM_BFb0016F10.f ZM_BFb Zea ma... 44 0.015 gi|71429957|gb|DR811007.1|DR811007 ZM_BFb0039A13.r ZM_BFb Zea ma... 44 0.015 gi|76286488|gb|DV026056.1|DV026056 ZM_BFb0146O17.r ZM_BFb Zea ma... 44 0.015 gi|78075414|gb|DV503848.1|DV503848 ZM_BFb0180H09.r ZM_BFb Zea ma... 44 0.015 gi|78077212|gb|DV505646.1|DV505646 ZM_BFb0183A22.r ZM_BFb Zea ma... 44 0.015 gi|78103697|gb|DV522125.1|DV522125 ZM_BFb0207L13.r ZM_BFb Zea ma... 44 0.015 gi|86472484|gb|DY238854.1|DY238854 ZM_BFb0256P05.r ZM_BFb Zea ma... 44 0.015 gi|23199813|gb|BU582378.1|BU582378 946188G03.y1 946 - tassel pri... 40 0.24 gi|26560080|gb|CA832315.1|CA832315 1117031C04.y1 1117 - Unigene ... 40 0.24 gi|76292543|gb|DV032111.1|DV032111 ZM_BFb0155M03.r ZM_BFb Zea ma... 40 0.24 gi|78073551|gb|DV501985.1|DV501985 ZM_BFb0129D24.r ZM_BFb Zea ma... 40 0.24 gi|78125586|gb|DV543970.1|DV543970 ZM_BFb0240G16.r ZM_BFb Zea ma... 40 0.24 gi|87156347|gb|DY401136.1|DY401136 V-946-8D-C04.Gal4-R UGV-Reseq... 40 0.24 gi|58082243|gb|AC155381.2| Zea mays strain B73 clone ZMMBBb0133B... 40 0.24 gi|32793099|gb|CD945335.1|CD945335 RDX_22 GeneTag1 Zea mays cDNA... 36 3.7 gi|32940240|gb|CF045059.1|CF045059 QCJ7g09.yg QCJ Zea mays cDNA ... 36 3.7 gi|50337160|gb|CO532286.1|CO532286 3530_1_212_1_D11.y_1 3530 - F... 36 3.7 gi|67015986|gb|CO444735.1|CO444735 MZCCL10075E07.g Maize Endospe... 36 3.7 gi|71428765|gb|DR809815.1|DR809815 ZM_BFb0037D06.r ZM_BFb Zea ma... 36 3.7 gi|71439274|gb|DR820324.1|DR820324 ZM_BFb0058H11.r ZM_BFb Zea ma... 36 3.7 gi|71439510|gb|DR820560.1|DR820560 ZM_BFb0059B11.r ZM_BFb Zea ma... 36 3.7 gi|71439716|gb|DR820766.1|DR820766 ZM_BFb0059J02.r ZM_BFb Zea ma... 36 3.7 gi|71443104|gb|DR824154.1|DR824154 ZM_BFb0065N09.f ZM_BFb Zea ma... 36 3.7 gi|71443105|gb|DR824155.1|DR824155 ZM_BFb0065N09.r ZM_BFb Zea ma... 36 3.7 gi|71447177|gb|DR828227.1|DR828227 ZM_BFb0072J08.r ZM_BFb Zea ma... 36 3.7 gi|71760267|gb|DR958204.1|DR958204 ZM_BFb0059B11.f ZM_BFb Zea ma... 36 3.7 gi|71761645|gb|DR959582.1|DR959582 ZM_BFb0071O22.f ZM_BFb Zea ma... 36 3.7 gi|71766091|gb|DR964028.1|DR964028 ZM_BFb0083E12.r ZM_BFb Zea ma... 36 3.7 gi|74245030|gb|DT652944.1|DT652944 ZM_BFb0119J22.r ZM_BFb Zea ma... 36 3.7 gi|76017455|gb|DT944625.1|DT944625 ZM_BFb0131H22.r ZM_BFb Zea ma... 36 3.7 gi|76282875|gb|DV022443.1|DV022443 ZM_BFb0141J20.r ZM_BFb Zea ma... 36 3.7 gi|76921691|gb|DV168653.1|DV168653 ZM_BFb0167G04.r ZM_BFb Zea ma... 36 3.7 gi|78105028|gb|DV523446.1|DV523446 ZM_BFb0209K17.r ZM_BFb Zea ma... 36 3.7 gi|78118401|gb|DV536787.1|DV536787 ZM_BFb0229G23.r ZM_BFb Zea ma... 36 3.7 gi|89762744|gb|DY690212.1|DY690212 ZM_BFb0287J02.r ZM_BFb Zea ma... 36 3.7 gi|2687357|gb|AF033263.1|AF033263 Zea mays nonphototropic hypoco... 36 3.7 gi|21213596|gb|AY109754.1| Zea mays CL1834_1 mRNA sequence 36 3.7 gi|21213596|gb|AY109754.1| Zea mays CL1834_1 mRNA sequence 36 3.7 gi|2687357|gb|AF033263.1|AF033263 Zea mays nonphototropic hypoco... 36 3.7 >gi|32934951|gb|CF039763.1|CF039763 QCH4a01.yg QCH Zea mays cDNA clone QCH4a01, mRNA sequence Length = 457 Score = 898 bits (453), Expect = 0.0 Identities = 456/457 (99%) Strand = Plus / Minus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 398 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 338 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 278 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 218 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcgaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 158 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 98 Query: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 38 Query: 421 cctggcctagatgcaatgcagaggaacaatgcagcgt 457 ||||||||||||||||||||||||||||||||||||| Sbjct: 37 cctggcctagatgcaatgcagaggaacaatgcagcgt 1 >gi|32933639|gb|CF038451.1|CF038451 QCH22b04.yg QCH Zea mays cDNA clone QCH22b04, mRNA sequence Length = 450 Score = 884 bits (446), Expect = 0.0 Identities = 449/450 (99%) Strand = Plus / Plus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1 acacggagttactttgccatgaaggttatggatacgacttctttggcaagtcggaagaag 60 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 Query: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 Query: 421 cctggcctagatgcaatgcagaggaacaat 450 |||||||||||||||||||||||||||||| Sbjct: 421 cctggcctagatgcaatgcagaggaacaat 450 >gi|76292260|gb|DV031828.1|DV031828 ZM_BFb0155F18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 793 Score = 712 bits (359), Expect = 0.0 Identities = 431/455 (94%) Strand = Plus / Plus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130 acacggagttactttgcaatgaaggtaatggataagacttctttggcgagtcggaagaag 189 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 190 ctgcttcgagctcagaccgagcgggagatcctacagtccctggaccatccatttctacca 249 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 250 accctgtacactcattttgagacagacaagttttcatgcttagttatggaattctgccct 309 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 ||||| || ||||| |||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 310 ggaggtgaccttcatactcttcgtcaaaggcaacctggaaaatatttctcagagcaagca 369 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 370 gcaaagttctatgtggcagaggtactccttgcattggaatacctgcatatgcttgggatt 429 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 430 atataccgtgatcttaaaccagaaaatgtcctcgttcgggaagatggccacatcatgcta 489 Query: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 490 tcagactttgatctctctcttcgctgttcagtaagcccaacggtgatcaagtctgcaaat 549 Query: 421 cctggcctagatgcaatgcagaggaacaatgcagc 455 ||||||||||||||||||||||||||||||||||| Sbjct: 550 cctggcctagatgcaatgcagaggaacaatgcagc 584 >gi|76911869|gb|DV164474.1|DV164474 ZM_BFb0160P05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 811 Score = 712 bits (359), Expect = 0.0 Identities = 431/455 (94%) Strand = Plus / Plus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130 acacggagttactttgcaatgaaggtaatggataagacttctttggcgagtcggaagaag 189 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 190 ctgcttcgagctcagaccgagcgggagatcctacagtccctggaccatccatttctacca 249 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 250 accctgtacactcattttgagacagacaagttttcatgcttagttatggaattctgccct 309 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 ||||| || ||||| |||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 310 ggaggtgaccttcatactcttcgtcaaaggcaacctggaaaatatttctcagagcaagca 369 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 370 gcaaagttctatgtggcagaggtactccttgcattggaatacctgcatatgcttgggatt 429 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 430 atataccgtgatcttaaaccagaaaatgtcctcgttcgggaagatggccacatcatgcta 489 Query: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 490 tcagactttgatctctctcttcgctgttcagtaagcccaacggtgatcaagtctgcaaat 549 Query: 421 cctggcctagatgcaatgcagaggaacaatgcagc 455 ||||||||||||||||||||||||||||||||||| Sbjct: 550 cctggcctagatgcaatgcagaggaacaatgcagc 584 >gi|76922593|gb|DV169076.1|DV169076 ZM_BFb0167P23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 738 Score = 712 bits (359), Expect = 0.0 Identities = 431/455 (94%) Strand = Plus / Plus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130 acacggagttactttgcaatgaaggtaatggataagacttctttggcgagtcggaagaag 189 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 190 ctgcttcgagctcagaccgagcgggagatcctacagtccctggaccatccatttctacca 249 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 250 accctgtacactcattttgagacagacaagttttcatgcttagttatggaattctgccct 309 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 ||||| || ||||| |||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 310 ggaggtgaccttcatactcttcgtcaaaggcaacctggaaaatatttctcagagcaagca 369 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 370 gcaaagttctatgtggcagaggtactccttgcattggaatacctgcatatgcttgggatt 429 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 430 atataccgtgatcttaaaccagaaaatgtcctcgttcgggaagatggccacatcatgcta 489 Query: 361 tcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaat 420 || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 490 tcagactttgatctctctcttcgctgttcagtaagcccaacggtgatcaagtctgcaaat 549 Query: 421 cctggcctagatgcaatgcagaggaacaatgcagc 455 ||||||||||||||||||||||||||||||||||| Sbjct: 550 cctggcctagatgcaatgcagaggaacaatgcagc 584 >gi|71435190|gb|DR816240.1|DR816240 ZM_BFb0047F16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 775 Score = 638 bits (322), Expect = 0.0 Identities = 337/342 (98%) Strand = Plus / Plus Query: 1 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acacggagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaag 480 Query: 61 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctacca 540 Query: 121 accctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgccct 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 541 accctgtatactcactttgagacagataagttttcatgcttggttatggaattctgccct 600 Query: 181 ggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ggaggggaccttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagca 660 Query: 241 gcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 gcaaagttctacgtagctgaggtgctccttgcattggaatacctgcatatgcttgggatt 720 Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaa 342 |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 721 atataccgtgatctcaaaccagaaaatgtcctcgttcgggaa 762 >gi|61118986|gb|DN559947.1|DN559947 ME17-G09-T3-96-R1 E7PCR Zea mays cDNA clone E7PCRME1709G, mRNA sequence Length = 839 Score = 563 bits (284), Expect = e-159 Identities = 284/284 (100%) Strand = Plus / Plus Query: 174 ctgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcaga 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcaga 60 Query: 234 gcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgct 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgct 120 Query: 294 tgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacat 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacat 180 Query: 354 catgctgtcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catgctgtcggacttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtc 240 Query: 414 cgcaaatcctggcctagatgcaatgcagaggaacaatgcagcgt 457 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cgcaaatcctggcctagatgcaatgcagaggaacaatgcagcgt 284 >gi|93016145|gb|EB641665.1|EB641665 ZM_BFb0331G24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 283 Score = 418 bits (211), Expect = e-115 Identities = 265/283 (93%) Strand = Plus / Plus Query: 150 gttttcatgcttggttatggaattctgccctggaggggatcttcacactcttcgccaaag 209 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| ||||| Sbjct: 1 gttttcatgcttagttatggaattctgccctggaggtgaccttcatactcttcgtcaaag 60 Query: 210 gcagcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctcct 269 ||| |||||||||||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 61 gcaacctggaaaatatttctcagagcaagcagcaaagttctatgtggcagaggtactcct 120 Query: 270 tgcattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 121 tgcattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagaaaatgt 180 Query: 330 cctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctcttcgctgttc 389 |||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 181 cctcgttcgggaagatggccacatcatgctatcagactttgatctctctcttcgctgttc 240 Query: 390 agtgagcctaacggtgatcaagtccgcaaatcctggcctagat 432 ||| |||| ||||||||||||||| |||||||||||||||||| Sbjct: 241 agtaagcccaacggtgatcaagtctgcaaatcctggcctagat 283 >gi|60340220|gb|DN207193.1|DN207193 MEST845_C04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 766 Score = 367 bits (185), Expect = e-100 Identities = 194/197 (98%) Strand = Plus / Minus Query: 261 ggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacc 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 766 ggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatctcaaacc 707 Query: 321 agagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctct 380 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 agaaaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctct 647 Query: 381 tcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcaatgca 440 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 646 tcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcattgca 587 Query: 441 gaggaacaatgcagcgt 457 ||||||||||||||||| Sbjct: 586 gaggaacaatgcagcgt 570 >gi|33102506|gb|CF062466.1|CF062466 QCT9f10.yg QCT Zea mays cDNA clone QCT9f10, mRNA sequence Length = 441 Score = 307 bits (155), Expect = 6e-82 Identities = 182/191 (95%) Strand = Plus / Plus Query: 265 ctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagag 324 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagaa 61 Query: 325 aatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctcttcgc 384 ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||| Sbjct: 62 aatgtcctcgttcgggaagatggccacatcatgctatcagactttgatctctctcttcgc 121 Query: 385 tgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcaatgcagagg 444 |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 122 tgttcagtaagcccaacggtgatcaagtctgcaaatcctggcctagatgcaatgcagcgg 181 Query: 445 aacaatgcagc 455 ||||||||||| Sbjct: 182 aacaatgcagc 192 >gi|33103115|gb|CF063075.1|CF063075 QCU17c01.yg QCU Zea mays cDNA clone QCU17c01, mRNA sequence Length = 441 Score = 303 bits (153), Expect = 1e-80 Identities = 186/197 (94%) Strand = Plus / Minus Query: 259 gaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaa 318 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 427 gaggtactccttgcattggaatacctgcatatgcttgggattatataccgggatcttaaa 368 Query: 319 ccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatct 378 ||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||| Sbjct: 367 ccagaaaatgtcctcgttcgggaagatggccacatcatgctatcagactttgatctctct 308 Query: 379 cttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcaatg 438 |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 307 cttcgctgttcagtaagcccaacggtgatcaagtctgcaaatcctggcctagatgcaatg 248 Query: 439 cagaggaacaatgcagc 455 ||| ||||||||||||| Sbjct: 247 cagcggaacaatgcagc 231 >gi|60351560|gb|DN218533.1|DN218533 MEST1068_B06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 745 Score = 272 bits (137), Expect = 4e-71 Identities = 161/169 (95%) Strand = Plus / Minus Query: 287 atatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagatg 346 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 745 atatgcttgggattatataccgtgatcttaaaccagaaaatgtcctcgttcgggaagatg 686 Query: 347 gccacatcatgctgtcggacttcgatctatctcttcgctgttcagtgagcctaacggtga 406 ||||||||||||| || ||||| ||||| ||||||||||||||||| |||| |||||||| Sbjct: 685 gccacatcatgctatcagactttgatctctctcttcgctgttcagtaagcccaacggtga 626 Query: 407 tcaagtccgcaaatcctggcctagatgcaatgcagaggaacaatgcagc 455 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tcaagtctgcaaatcctggcctagatgcaatgcagaggaacaatgcagc 577 >gi|32793976|gb|CD946212.1|CD946212 REK_21 GeneTag1 Zea mays cDNA, mRNA sequence Length = 130 Score = 250 bits (126), Expect = 1e-64 Identities = 129/130 (99%) Strand = Plus / Minus Query: 187 gatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaag 246 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 gatcttcacacttttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaag 71 Query: 247 ttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatatac 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 ttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatatac 11 Query: 307 cgtgatctta 316 |||||||||| Sbjct: 10 cgtgatctta 1 >gi|76019438|gb|DT946608.1|DT946608 ZM_BFb0134G07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 784 Score = 212 bits (107), Expect = 3e-53 Identities = 131/139 (94%) Strand = Plus / Plus Query: 317 aaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctat 376 ||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| | Sbjct: 1 aaccagaaaatgtcctcgttcgggaagatggccacatcatgctatcagactttgatctct 60 Query: 377 ctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcaa 436 |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 61 ctcttcgctgttcagtaagcccaacggtgatcaagtctgcaaatcctggcctagatgcaa 120 Query: 437 tgcagaggaacaatgcagc 455 ||||||||||||||||||| Sbjct: 121 tgcagaggaacaatgcagc 139 >gi|168617|gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end Length = 1663 Score = 194 bits (98), Expect = 7e-48 Identities = 301/366 (82%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 13 tttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttcgagct 72 |||||||||||| | ||||| ||| | || || ||||| || || ||||||||| |||| Sbjct: 162 tttgccatgaagatcatggacaaggcgtcattagcaagccgcaaaaagctgcttagagcg 221 Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132 ||||| || ||||||| |||| | |||||| ||||| ||||| ||||| |||| ||| Sbjct: 222 cagactgaaagggagatattgcaatgcctggatcatccttttcttccaacattgtacact 281 Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192 ||||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || Sbjct: 282 cactttgagacggataagttctcatgcttggtgatggagttctgccctggaggtgaccta 341 Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252 || || || | |||| ||||||||| || ||||| | || ||||| || ||||| ||| Sbjct: 342 cataccctaaggcaaaagcagcctggcaagtatttccctgaacaagctgccaagttttat 401 Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312 ||||| |||||||| ||||| ||||||||||||| |||||||| || ||||||||||| Sbjct: 402 gtagcagaggtgcttcttgctctggaatacctgcacatgcttggtatcatataccgtga- 460 Query: 313 cttaaa-ccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 |||||| ||||||||||| || || |||||||||| || |||||||||||||| ||||| Sbjct: 461 cttaaagccagagaatgttcttgtgagggaagatggacatatcatgctgtcggatttcga 520 Query: 372 tctatc 377 | |||| Sbjct: 521 tttatc 526 >gi|168617|gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end Length = 1663 Score = 194 bits (98), Expect = 7e-48 Identities = 301/366 (82%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 13 tttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttcgagct 72 |||||||||||| | ||||| ||| | || || ||||| || || ||||||||| |||| Sbjct: 162 tttgccatgaagatcatggacaaggcgtcattagcaagccgcaaaaagctgcttagagcg 221 Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132 ||||| || ||||||| |||| | |||||| ||||| ||||| ||||| |||| ||| Sbjct: 222 cagactgaaagggagatattgcaatgcctggatcatccttttcttccaacattgtacact 281 Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192 ||||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || Sbjct: 282 cactttgagacggataagttctcatgcttggtgatggagttctgccctggaggtgaccta 341 Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252 || || || | |||| ||||||||| || ||||| | || ||||| || ||||| ||| Sbjct: 342 cataccctaaggcaaaagcagcctggcaagtatttccctgaacaagctgccaagttttat 401 Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312 ||||| |||||||| ||||| ||||||||||||| |||||||| || ||||||||||| Sbjct: 402 gtagcagaggtgcttcttgctctggaatacctgcacatgcttggtatcatataccgtga- 460 Query: 313 cttaaa-ccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 |||||| ||||||||||| || || |||||||||| || |||||||||||||| ||||| Sbjct: 461 cttaaagccagagaatgttcttgtgagggaagatggacatatcatgctgtcggatttcga 520 Query: 372 tctatc 377 | |||| Sbjct: 521 tttatc 526 >gi|37417440|gb|CF646373.1|CF646373 3530_1_112_1_H05.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 615 Score = 186 bits (94), Expect = 2e-45 Identities = 300/366 (81%), Gaps = 2/366 (0%) Strand = Plus / Minus Query: 13 tttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttcgagct 72 |||||||||||| | ||||| ||| | || || |||| || || ||||||||| |||| Sbjct: 429 tttgccatgaagatcatggacaaggcgtcattagcaacccgcaaaaagctgcttagagcg 370 Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132 ||||| || ||||||| |||| | |||||| ||||| ||||| ||||| |||| ||| Sbjct: 369 cagactgaaagggagatattgcaatgcctggatcatccttttcttccaacattgtacact 310 Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192 ||||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || Sbjct: 309 cactttgagacggataagttctcatgcttggtgatggagttctgccctggaggtgaccta 250 Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252 || || || | |||| ||||||||| || ||||| | || ||||| || ||||| ||| Sbjct: 249 cataccctaaggcaaaagcagcctggcaagtatttccctgaacaagctgccaagttttat 190 Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312 ||||| |||||||| ||||| ||||||||||||| |||||||| || ||||||||||| Sbjct: 189 gtagcagaggtgcttcttgctctggaatacctgcacatgcttggtatcatataccgtga- 131 Query: 313 cttaaa-ccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 |||||| ||||||||||| || || |||||||||| || |||||||||||||| ||||| Sbjct: 130 cttaaagccagagaatgttcttgtgagggaagatggacatatcatgctgtcggatttcga 71 Query: 372 tctatc 377 | |||| Sbjct: 70 tttatc 65 >gi|78082965|gb|DV511358.1|DV511358 ZM_BFb0191H18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 763 Score = 186 bits (94), Expect = 2e-45 Identities = 300/366 (81%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 13 tttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttcgagct 72 |||||||||||| | ||||| ||| | || || |||| || || ||||||||| |||| Sbjct: 156 tttgccatgaagatcatggacaaggcgtcattagcaacccgcaaaaagctgcttagagcg 215 Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132 ||||| || ||||||| |||| | |||||| ||||| ||||| ||||| |||| ||| Sbjct: 216 cagactgaaagggagatattgcaatgcctggatcatccttttcttccaacattgtacact 275 Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192 ||||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || Sbjct: 276 cactttgagacggataagttctcatgcttggtgatggagttctgccctggaggtgaccta 335 Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252 || || || | |||| ||||||||| || ||||| | || ||||| || ||||| ||| Sbjct: 336 cataccctaaggcaaaagcagcctggcaagtatttccctgaacaagctgccaagttttat 395 Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312 ||||| |||||||| ||||| ||||||||||||| |||||||| || ||||||||||| Sbjct: 396 gtagcagaggtgcttcttgctctggaatacctgcacatgcttggtatcatataccgtga- 454 Query: 313 cttaaa-ccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 |||||| ||||||||||| || || |||||||||| || |||||||||||||| ||||| Sbjct: 455 cttaaagccagagaatgttcttgtgagggaagatggacatatcatgctgtcggatttcga 514 Query: 372 tctatc 377 | |||| Sbjct: 515 tttatc 520 >gi|78114667|gb|DV533055.1|DV533055 ZM_BFb0223P22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 762 Score = 184 bits (93), Expect = 6e-45 Identities = 266/321 (82%), Gaps = 2/321 (0%) Strand = Plus / Plus Query: 58 aagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttcta 117 ||||||||| |||| ||||| || ||||||| |||| | |||||| ||||| ||||| Sbjct: 1 aagctgcttagagcgcagactgaaagggagatattgcaatgcctggatcatccttttctt 60 Query: 118 ccaaccctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgc 177 ||||| |||| |||||||||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 61 ccaacattgtacactcactttgagacggataagttctcatgcttggtgatggagttctgc 120 Query: 178 cctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaa 237 |||||||| || || || || || | |||| ||||||||| || ||||| | || ||| Sbjct: 121 cctggaggtgacctacataccctaaggcaaaagcagcctggcaagtatttccctgaacaa 180 Query: 238 gcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttggg 297 || || ||||| |||||||| |||||||| ||||| ||||||||||||| |||||||| Sbjct: 181 gctgccaagttttatgtagcagaggtgcttcttgctctggaatacctgcacatgcttggt 240 Query: 298 attatataccgtgatcttaaa-ccagagaatgtcctcgttcgggaagatggccacatcat 356 || ||||||||||| |||||| ||||||||||| || || |||||||||| || ||||| Sbjct: 241 atcatataccgtga-cttaaagccagagaatgttcttgtgagggaagatggacatatcat 299 Query: 357 gctgtcggacttcgatctatc 377 ||||||||| |||||| |||| Sbjct: 300 gctgtcggatttcgatttatc 320 >gi|21214380|gb|AY110216.1| Zea mays CL968_1 mRNA sequence Length = 1663 Score = 115 bits (58), Expect = 5e-24 Identities = 147/174 (84%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 205 caaaggcagcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgaggtg 264 |||| ||||||||| || ||||| | || ||||| || ||||| |||||||| |||||| Sbjct: 354 caaaagcagcctggcaagtatttccctgaacaagctgccaagttttatgtagcagaggtg 413 Query: 265 ctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaa-ccaga 323 || ||||| ||||||||||||| |||||||| || ||||||||||| |||||| ||||| Sbjct: 414 cttcttgctctggaatacctgcacatgcttggtatcatataccgtga-cttaaagccaga 472 Query: 324 gaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatc 377 |||||| || || |||||||||| || |||||||||||||| |||||| |||| Sbjct: 473 gaatgttcttgtgagggaagatggacatatcatgctgtcggatttcgatttatc 526 >gi|21214380|gb|AY110216.1| Zea mays CL968_1 mRNA sequence Length = 1663 Score = 115 bits (58), Expect = 5e-24 Identities = 147/174 (84%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 205 caaaggcagcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgaggtg 264 |||| ||||||||| || ||||| | || ||||| || ||||| |||||||| |||||| Sbjct: 354 caaaagcagcctggcaagtatttccctgaacaagctgccaagttttatgtagcagaggtg 413 Query: 265 ctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaa-ccaga 323 || ||||| ||||||||||||| |||||||| || ||||||||||| |||||| ||||| Sbjct: 414 cttcttgctctggaatacctgcacatgcttggtatcatataccgtga-cttaaagccaga 472 Query: 324 gaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatc 377 |||||| || || |||||||||| || |||||||||||||| |||||| |||| Sbjct: 473 gaatgttcttgtgagggaagatggacatatcatgctgtcggatttcgatttatc 526 >gi|32794010|gb|CD946246.1|CD946246 REK_83 GeneTag1 Zea mays cDNA, mRNA sequence Length = 121 Score = 113 bits (57), Expect = 2e-23 Identities = 100/109 (91%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 187 gatcttcacactcttcgccaaaggcagcctggaaaatatttttcagag-caagcagcaaa 245 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1 gatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagtcaagcaactgc 60 Query: 246 gttctatgta-gctgaggtgctccttgca-ttggaata-cctgcatatg 291 |||||||||| ||||||| |||||||||| |||||||| |||||||||| Sbjct: 61 gttctatgtaggctgaggggctccttgcacttggaatagcctgcatatg 109 >gi|28873862|gb|CB329794.1|CB329794 3529_1_23_1_G10.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 531 Score = 91.7 bits (46), Expect = 7e-17 Identities = 94/110 (85%) Strand = Plus / Plus Query: 277 gaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgtt 336 ||||||||||| ||||| || || |||||||||||||| || |||||||| ||||| || Sbjct: 218 gaatacctgcacatgctcggcatcatataccgtgatctcaagccagagaacgtccttgtc 277 Query: 337 cgggaagatggccacatcatgctgtcggacttcgatctatctcttcgctg 386 ||||| || || ||||||||||| ||||||||||| || || |||||||| Sbjct: 278 cgggaggacgggcacatcatgctctcggacttcgacctctcccttcgctg 327 >gi|28930937|gb|CB334298.1|CB334298 3529_1_23_1_G10.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 587 Score = 91.7 bits (46), Expect = 7e-17 Identities = 94/110 (85%) Strand = Plus / Plus Query: 277 gaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgtt 336 ||||||||||| ||||| || || |||||||||||||| || |||||||| ||||| || Sbjct: 225 gaatacctgcacatgctcggtatcatataccgtgatctcaagccagagaacgtccttgtc 284 Query: 337 cgggaagatggccacatcatgctgtcggacttcgatctatctcttcgctg 386 ||||| || || ||||||||||| ||||||||||| || || |||||||| Sbjct: 285 cgggaggacgggcacatcatgctctcggacttcgacctctcccttcgctg 334 >gi|91932924|gb|AC185226.1| Zea mays chromosome UNK clone CH201-422D14; ZMMBBc0422D14, *** SEQUENCING IN PROGRESS ***, 34 unordered pieces Length = 176008 Score = 91.7 bits (46), Expect = 7e-17 Identities = 94/110 (85%) Strand = Plus / Plus Query: 277 gaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgtt 336 ||||||||||| ||||| || || |||||||||||||| || |||||||| ||||| || Sbjct: 60341 gaatacctgcacatgctcggtatcatataccgtgatctcaagccagagaacgtccttgtc 60400 Query: 337 cgggaagatggccacatcatgctgtcggacttcgatctatctcttcgctg 386 ||||| || || ||||||||||| ||||||||||| || || |||||||| Sbjct: 60401 cgggaggacgggcacatcatgctctcggacttcgacctctcccttcgctg 60450 Score = 65.9 bits (33), Expect = 4e-09 Identities = 138/173 (79%) Strand = Plus / Plus Query: 55 aagaagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccattt 114 ||||||||||| || ||||| || ||| |||||| ||||||| |||||| || || || Sbjct: 59979 aagaagctgctccgggctcaaacggagaaggagattctgcagtgcctggatcaccccttc 60038 Query: 115 ctaccaaccctgtatactcactttgagacagacaagttttcatgcttggttatggaattc 174 || || || || || || ||||| ||||| || ||||| || ||| |||| ||||| ||| Sbjct: 60039 cttcctacgctttacacccacttcgagaccgataagttctcctgcctggtcatggagttc 60098 Query: 175 tgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatattt 227 ||||| ||||| || || ||| ||||||| || ||||||||||| ||| |||| Sbjct: 60099 tgccccggaggagacctccacgctcttcggcagaggcagcctggcaaacattt 60151 >gi|18661432|gb|BM501394.1|BM501394 PAC000000000709 Pioneer AF-1 array Zea mays cDNA, mRNA sequence Length = 406 Score = 67.9 bits (34), Expect = 1e-09 Identities = 64/74 (86%) Strand = Plus / Plus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||||||||| || |||||||| |||| ||||| |||||||| ||||||||||| Sbjct: 135 atataccgtgatctgaagccagagaacatccttgttcgtgaagatgggcacatcatgctc 194 Query: 361 tcggacttcgatct 374 || ||||| ||||| Sbjct: 195 tcagactttgatct 208 >gi|60401285|gb|DN234092.1|DN234092 MEST1187_C11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 739 Score = 67.9 bits (34), Expect = 1e-09 Identities = 64/74 (86%) Strand = Plus / Plus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||||||||| || |||||||| |||| ||||| |||||||| ||||||||||| Sbjct: 265 atataccgtgatctgaagccagagaacatccttgttcgtgaagatgggcacatcatgctc 324 Query: 361 tcggacttcgatct 374 || ||||| ||||| Sbjct: 325 tcagactttgatct 338 >gi|67014920|gb|CO443669.1|CO443669 MZCCL10048C05.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 910 Score = 67.9 bits (34), Expect = 1e-09 Identities = 96/117 (82%) Strand = Plus / Plus Query: 198 tcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctatgtagc 257 ||||||||||||||| ||||||||| ||| |||||| |||||||| ||| ||||| || Sbjct: 614 tcttcgccaaaggcaacctggaaaaagctttccagagccagcagcaaggttttatgttgc 673 Query: 258 tgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatct 314 || || |||||||| |||||||| || || ||| | || | |||||||||||||| Sbjct: 674 agaagttctccttgctttggaatatcttcacatgttangggtcatataccgtgatct 730 >gi|13490665|gb|BG517429.1|BG517429 947062E05.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 378 Score = 65.9 bits (33), Expect = 4e-09 Identities = 138/173 (79%) Strand = Plus / Plus Query: 55 aagaagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccattt 114 ||||||||||| || ||||| || ||| |||||| ||||||| |||||| || || || Sbjct: 138 aagaagctgctccgggctcaaacggagaaggagattctgcagtgcctggatcaccccttc 197 Query: 115 ctaccaaccctgtatactcactttgagacagacaagttttcatgcttggttatggaattc 174 || || || || || || ||||| ||||| || ||||| || ||| |||| ||||| ||| Sbjct: 198 cttcctacgctttacacccacttcgagaccgataagttctcctgcctggtcatggagttc 257 Query: 175 tgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatattt 227 ||||| ||||| || || ||| ||||||| || ||||||||||| ||| |||| Sbjct: 258 tgccccggaggagacctccacgctcttcggcagaggcagcctggcaaacattt 310 >gi|50323590|gb|CO518716.1|CO518716 3530_1_122_1_D02.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 688 Score = 65.9 bits (33), Expect = 4e-09 Identities = 102/125 (81%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| |||||||| ||||||||| | | ||| | || || || || Sbjct: 84 gtgctccttgcgctggagtacctgcacatgcttggggtggtctacagagacctgaagccg 143 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctctt 381 ||||| |||||||| | |||||||||||||||||||| || |||||||| || || ||| Sbjct: 144 gagaacgtcctcgtgagagaagatggccacatcatgctctccgacttcgacctctccctt 203 Query: 382 cgctg 386 ||||| Sbjct: 204 cgctg 208 >gi|50334282|gb|CO529408.1|CO529408 3530_1_194_1_D08.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 608 Score = 65.9 bits (33), Expect = 4e-09 Identities = 102/125 (81%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| |||||||| ||||||||| | | ||| | || || || || Sbjct: 429 gtgctccttgcgctggagtacctgcacatgcttggggtggtctacagagacctgaagccg 488 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctctt 381 ||||| |||||||| | |||||||||||||||||||| || |||||||| || || ||| Sbjct: 489 gagaacgtcctcgtgagagaagatggccacatcatgctctccgacttcgacctctccctt 548 Query: 382 cgctg 386 ||||| Sbjct: 549 cgctg 553 >gi|71768651|gb|DR966588.1|DR966588 ZM_BFb0087A10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 763 Score = 65.9 bits (33), Expect = 4e-09 Identities = 102/125 (81%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| |||||||| ||||||||| | | ||| | || || || || Sbjct: 380 gtgctccttgcgctggagtacctgcacatgcttggggtggtctacagagacctgaagccg 439 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatctatctctt 381 ||||| |||||||| | |||||||||||||||||||| || |||||||| || || ||| Sbjct: 440 gagaacgtcctcgtgagagaagatggccacatcatgctctccgacttcgacctctccctt 499 Query: 382 cgctg 386 ||||| Sbjct: 500 cgctg 504 >gi|50326813|gb|CO521939.1|CO521939 3530_1_144_1_G09.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 734 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 541 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 482 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 481 tcggacttcgacctctctcttcg 459 >gi|60357516|gb|DN224489.1|DN224489 MEST1159_H07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 734 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 524 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 465 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 464 tcggacttcgacctctctcttcg 442 >gi|71329909|gb|DR801673.1|DR801673 ZM_BFb0025J17.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 811 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 508 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 449 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 448 tcggacttcgacctctctcttcg 426 >gi|71330360|gb|DR801934.1|DR801934 ZM_BFb0025P19.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 758 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 509 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 450 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 449 tcggacttcgacctctctcttcg 427 >gi|78120214|gb|DV538598.1|DV538598 ZM_BFb0232B18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 663 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 476 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 417 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 416 tcggacttcgacctctctcttcg 394 >gi|86472324|gb|DY238694.1|DY238694 ZM_BFb0256L01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 651 Score = 61.9 bits (31), Expect = 6e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 487 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 428 Query: 361 tcggacttcgatctatctcttcg 383 ||||||||||| || |||||||| Sbjct: 427 tcggacttcgacctctctcttcg 405 >gi|60339555|gb|DN206528.1|DN206528 MEST835_E04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 697 Score = 60.0 bits (30), Expect = 3e-07 Identities = 78/94 (82%) Strand = Plus / Minus Query: 304 taccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcg 363 ||||||||||| || |||||||| | || ||||| |||||||| ||||||||||| || Sbjct: 526 taccgtgatctgaagccagagaacatacttgttcgagaagatgggcacatcatgctctca 467 Query: 364 gacttcgatctatctcttcgctgttcagtgagcc 397 ||||| ||||| ||||| | || |||||||||| Sbjct: 466 gactttgatctgtctctgaggtgctcagtgagcc 433 >gi|89755055|gb|DY685617.1|DY685617 ZM_BFb0272C01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 607 Score = 60.0 bits (30), Expect = 3e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 304 taccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcg 363 ||||||||||| || |||||||| | || ||||| |||||||| ||||||||||| || Sbjct: 458 taccgtgatctgaagccagagaacatacttgttcgagaagatgggcacatcatgctctca 517 Query: 364 gacttcgatctatctcttcgctgttcagtgagcc 397 ||||| ||||| ||||| | || |||||||||| Sbjct: 518 gactttgatctgtctctgaggtgctcagtgagcc 551 >gi|91049137|gb|EB159555.1|EB159555 ZM_BFb0295H09.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 691 Score = 54.0 bits (27), Expect = 2e-05 Identities = 60/71 (84%) Strand = Plus / Minus Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctg 360 |||||||| ||||| || || || |||||||| || ||||| || || ||||||||||| Sbjct: 498 atataccgcgatctcaagcctgaaaatgtccttgtccgggaggacgggcacatcatgctc 439 Query: 361 tcggacttcga 371 ||||||||||| Sbjct: 438 tcggacttcga 428 >gi|20208261|gb|BQ134350.1|BQ134350 1091016A03.y2 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 471 Score = 52.0 bits (26), Expect = 6e-05 Identities = 89/110 (80%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| ||||||||||||||||| | | ||| | ||||| || || Sbjct: 180 gtgctccttgcgctggagtacctgcatatgcttggagtggtctacagagatctgaagccg 239 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 ||||| || ||||| | |||||||||||||||||| | || |||||||| Sbjct: 240 gagaacgtgctcgtgagagaagatggccacatcatgatctccgacttcga 289 >gi|21987178|gb|BQ778706.1|BQ778706 946113F01.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 457 Score = 52.0 bits (26), Expect = 6e-05 Identities = 89/110 (80%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| ||||||||||||||||| | | ||| | ||||| || || Sbjct: 194 gtgctccttgcgctggagtacctgcatatgcttggagtggtctacagagatctgaagccg 253 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 ||||| || ||||| | |||||||||||||||||| | || |||||||| Sbjct: 254 gagaacgtgctcgtgagagaagatggccacatcatgatctccgacttcga 303 Score = 40.1 bits (20), Expect = 0.24 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cagaccgagcgggagatcctgcag 96 ||||| |||||||||||||||||| Sbjct: 5 cagacggagcgggagatcctgcag 28 >gi|21987322|gb|BQ778850.1|BQ778850 946114G01.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 631 Score = 52.0 bits (26), Expect = 6e-05 Identities = 89/110 (80%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| ||||||||||||||||| | | ||| | ||||| || || Sbjct: 257 gtgctccttgcgctggagtacctgcatatgcttggagtggtctacagagatctgaagccg 316 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 ||||| || ||||| | |||||||||||||||||| | || |||||||| Sbjct: 317 gagaacgtgctcgtgagagaagatggccacatcatgatctccgacttcga 366 Score = 40.1 bits (20), Expect = 0.24 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cagaccgagcgggagatcctgcag 96 ||||| |||||||||||||||||| Sbjct: 68 cagacggagcgggagatcctgcag 91 >gi|26456124|gb|CA827707.1|CA827707 1114018D03.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 519 Score = 52.0 bits (26), Expect = 6e-05 Identities = 89/110 (80%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| ||||||||||||||||| | | ||| | ||||| || || Sbjct: 235 gtgctccttgcgctggagtacctgcatatgcttggagtggtctacagagatctgaagccg 294 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 ||||| || ||||| | |||||||||||||||||| | || |||||||| Sbjct: 295 gagaacgtgctcgtgagagaagatggccacatcatgatctccgacttcga 344 Score = 40.1 bits (20), Expect = 0.24 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cagaccgagcgggagatcctgcag 96 ||||| |||||||||||||||||| Sbjct: 46 cagacggagcgggagatcctgcag 69 >gi|26558297|gb|CA830532.1|CA830532 1117008E01.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 369 Score = 52.0 bits (26), Expect = 6e-05 Identities = 89/110 (80%) Strand = Plus / Plus Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321 ||||||||||| |||| ||||||||||||||||| | | ||| | ||||| || || Sbjct: 75 gtgctccttgcgctggagtacctgcatatgcttggagtggtctacagagatctgaagccg 134 Query: 322 gagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcga 371 ||||| || ||||| | |||||||||||||||||| | || |||||||| Sbjct: 135 gagaacgtgctcgtgagagaagatggccacatcatgatctccgacttcga 184 >gi|5268688|gb|AI770652.1|AI770652 606055F01.x2 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 622 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 79 ggccacatcatgctctcggacttcga 104 >gi|71317133|gb|DR795254.1|DR795254 ZM_BFb0016F10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 725 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 595 ggccacatcatgctctcggacttcga 570 >gi|71429957|gb|DR811007.1|DR811007 ZM_BFb0039A13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 855 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 745 ggccacatcatgctctcggacttcga 770 >gi|76286488|gb|DV026056.1|DV026056 ZM_BFb0146O17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 818 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 755 ggccacatcatgctctcggacttcga 780 >gi|78075414|gb|DV503848.1|DV503848 ZM_BFb0180H09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 866 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 724 ggccacatcatgctctcggacttcga 749 >gi|78077212|gb|DV505646.1|DV505646 ZM_BFb0183A22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 771 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 388 ggccacatcatgctctcggacttcga 413 >gi|78103697|gb|DV522125.1|DV522125 ZM_BFb0207L13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 816 Score = 44.1 bits (22), Expect = 0.015 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| ||||||||||| Sbjct: 757 ggccacatcatgctctcggacttcga 782 >gi|86472484|gb|DY238854.1|DY238854 ZM_BFb0256P05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 664 Score = 44.1 bits (22), Expect = 0.015 Identities = 43/50 (86%) Strand = Plus / Plus Query: 337 cgggaagatggccacatcatgctgtcggacttcgatctatctcttcgctg 386 ||||| || |||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 99 cgggaggacggccacatcatgctctcggatttcgacctgtctctgcgctg 148 >gi|23199813|gb|BU582378.1|BU582378 946188G03.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 619 Score = 40.1 bits (20), Expect = 0.24 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaatgtcct 332 |||||||||| |||||||||||| |||| Sbjct: 234 accgtgatctgaaaccagagaatttcct 261 >gi|26560080|gb|CA832315.1|CA832315 1117031C04.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 532 Score = 40.1 bits (20), Expect = 0.24 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaatgtcct 332 |||||||||| |||||||||||| |||| Sbjct: 176 accgtgatctgaaaccagagaatttcct 203 >gi|76292543|gb|DV032111.1|DV032111 ZM_BFb0155M03.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 852 Score = 40.1 bits (20), Expect = 0.24 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaatgtcct 332 |||||||||| |||||||||||| |||| Sbjct: 399 accgtgatctgaaaccagagaatttcct 426 >gi|78073551|gb|DV501985.1|DV501985 ZM_BFb0129D24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 850 Score = 40.1 bits (20), Expect = 0.24 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cagaccgagcgggagatcctgcag 96 ||||| |||||||||||||||||| Sbjct: 820 cagacggagcgggagatcctgcag 843 >gi|78125586|gb|DV543970.1|DV543970 ZM_BFb0240G16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 644 Score = 40.1 bits (20), Expect = 0.24 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaatgtcct 332 |||||||||| |||||||||||| |||| Sbjct: 448 accgtgatctgaaaccagagaatttcct 475 >gi|87156347|gb|DY401136.1|DY401136 V-946-8D-C04.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 656 Score = 40.1 bits (20), Expect = 0.24 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaatgtcct 332 |||||||||| |||||||||||| |||| Sbjct: 151 accgtgatctgaaaccagagaatttcct 178 >gi|58082243|gb|AC155381.2| Zea mays strain B73 clone ZMMBBb0133B08, *** SEQUENCING IN PROGRESS ***, 39 unordered pieces Length = 118664 Score = 40.1 bits (20), Expect = 0.24 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 gatggccacatcatgctgtcggacttcgatct 374 ||||||||||||||||| || ||||| ||||| Sbjct: 61479 gatggccacatcatgctctccgactttgatct 61448 >gi|32793099|gb|CD945335.1|CD945335 RDX_22 GeneTag1 Zea mays cDNA, mRNA sequence Length = 93 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 10 tactttgccatgaaggttatggataa 35 |||||||||||||| | ||||||||| Sbjct: 54 tactttgccatgaaagctatggataa 79 >gi|32940240|gb|CF045059.1|CF045059 QCJ7g09.yg QCJ Zea mays cDNA clone QCJ7g09, mRNA sequence Length = 202 Score = 36.2 bits (18), Expect = 3.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 148 aagttttcatgcttggtt 165 |||||||||||||||||| Sbjct: 191 aagttttcatgcttggtt 174 >gi|50337160|gb|CO532286.1|CO532286 3530_1_212_1_D11.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 738 Score = 36.2 bits (18), Expect = 3.7 Identities = 60/74 (81%) Strand = Plus / Plus Query: 103 gaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgcttg 162 ||||| ||||| || ||||| ||||||| || ||||| || |||| ||| || || ||| Sbjct: 139 gaccacccattcctcccaacgttgtatacacattttgaaaccgacaggttctcttgtttg 198 Query: 163 gttatggaattctg 176 || ||||||||||| Sbjct: 199 gtgatggaattctg 212 >gi|67015986|gb|CO444735.1|CO444735 MZCCL10075E07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 873 Score = 36.2 bits (18), Expect = 3.7 Identities = 60/74 (81%) Strand = Plus / Plus Query: 103 gaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgcttg 162 ||||| ||||| || ||||| ||||||| || ||||| || |||| ||| || || ||| Sbjct: 79 gaccacccattcctcccaacgttgtatacacattttgaaaccgacaggttctcttgtttg 138 Query: 163 gttatggaattctg 176 || ||||||||||| Sbjct: 139 gtgatggaattctg 152 >gi|71428765|gb|DR809815.1|DR809815 ZM_BFb0037D06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 748 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 248 ggccacatcatgctgaccgacttcga 273 >gi|71439274|gb|DR820324.1|DR820324 ZM_BFb0058H11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 820 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaa 326 |||| ||||||||||||||||| Sbjct: 653 accgggatcttaaaccagagaa 674 >gi|71439510|gb|DR820560.1|DR820560 ZM_BFb0059B11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 917 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| |||||||||| Sbjct: 840 ggccacatcatgctcacggacttcga 865 >gi|71439716|gb|DR820766.1|DR820766 ZM_BFb0059J02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 838 Score = 36.2 bits (18), Expect = 3.7 Identities = 60/74 (81%) Strand = Plus / Plus Query: 103 gaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgcttg 162 ||||| ||||| || ||||| ||||||| || ||||| || |||| ||| || || ||| Sbjct: 44 gaccacccattcctcccaacgttgtatacacattttgaaaccgacaggttctcttgtttg 103 Query: 163 gttatggaattctg 176 || ||||||||||| Sbjct: 104 gtgatggaattctg 117 >gi|71443104|gb|DR824154.1|DR824154 ZM_BFb0065N09.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 380 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 149 ggccacatcatgctgaccgacttcga 174 >gi|71443105|gb|DR824155.1|DR824155 ZM_BFb0065N09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 734 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 149 ggccacatcatgctgaccgacttcga 174 >gi|71447177|gb|DR828227.1|DR828227 ZM_BFb0072J08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 615 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 248 ggccacatcatgctgaccgacttcga 273 >gi|71760267|gb|DR958204.1|DR958204 ZM_BFb0059B11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 781 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Minus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| |||||||||| Sbjct: 182 ggccacatcatgctcacggacttcga 157 >gi|71761645|gb|DR959582.1|DR959582 ZM_BFb0071O22.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 779 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Minus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||||||||||| |||||||||| Sbjct: 175 ggccacatcatgctcacggacttcga 150 >gi|71766091|gb|DR964028.1|DR964028 ZM_BFb0083E12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 813 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaa 326 |||| ||||||||||||||||| Sbjct: 729 accgggatcttaaaccagagaa 750 >gi|74245030|gb|DT652944.1|DT652944 ZM_BFb0119J22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 791 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 |||||| ||||||| ||||||||||| Sbjct: 761 ggccacctcatgctctcggacttcga 786 >gi|76017455|gb|DT944625.1|DT944625 ZM_BFb0131H22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 778 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggact 367 |||||||||||||| ||||||| Sbjct: 757 ggccacatcatgctctcggact 778 >gi|76282875|gb|DV022443.1|DV022443 ZM_BFb0141J20.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 746 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 245 ggccacatcatgctgaccgacttcga 270 >gi|76921691|gb|DV168653.1|DV168653 ZM_BFb0167G04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 851 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaa 326 |||| ||||||||||||||||| Sbjct: 659 accgggatcttaaaccagagaa 680 >gi|78105028|gb|DV523446.1|DV523446 ZM_BFb0209K17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 895 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaa 326 |||| ||||||||||||||||| Sbjct: 677 accgggatcttaaaccagagaa 698 >gi|78118401|gb|DV536787.1|DV536787 ZM_BFb0229G23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 802 Score = 36.2 bits (18), Expect = 3.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 305 accgtgatcttaaaccagagaa 326 |||| ||||||||||||||||| Sbjct: 765 accgagatcttaaaccagagaa 786 >gi|89762744|gb|DY690212.1|DY690212 ZM_BFb0287J02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 776 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 346 ggccacatcatgctgtcggacttcga 371 ||||||||||||||| | |||||||| Sbjct: 245 ggccacatcatgctgaccgacttcga 270 >gi|2687357|gb|AF033263.1|AF033263 Zea mays nonphototropic hypocotyl 1 (nph1) mRNA, complete cds Length = 3330 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 10 tactttgccatgaaggttatggataa 35 |||||||||||||| | ||||||||| Sbjct: 2233 tactttgccatgaaagctatggataa 2258 >gi|21213596|gb|AY109754.1| Zea mays CL1834_1 mRNA sequence Length = 3290 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 10 tactttgccatgaaggttatggataa 35 |||||||||||||| | ||||||||| Sbjct: 2233 tactttgccatgaaagctatggataa 2258 >gi|21213596|gb|AY109754.1| Zea mays CL1834_1 mRNA sequence Length = 3290 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 10 tactttgccatgaaggttatggataa 35 |||||||||||||| | ||||||||| Sbjct: 2233 tactttgccatgaaagctatggataa 2258 >gi|2687357|gb|AF033263.1|AF033263 Zea mays nonphototropic hypocotyl 1 (nph1) mRNA, complete cds Length = 3330 Score = 36.2 bits (18), Expect = 3.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 10 tactttgccatgaaggttatggataa 35 |||||||||||||| | ||||||||| Sbjct: 2233 tactttgccatgaaagctatggataa 2258 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 146,261 Number of Sequences: 836351 Number of extensions: 146261 Number of successful extensions: 9119 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 9000 Number of HSP's gapped (non-prelim): 111 length of query: 457 length of database: 669,372,029 effective HSP length: 19 effective length of query: 438 effective length of database: 653,481,360 effective search space: 286224835680 effective search space used: 286224835680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)