BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QCG16f05.yg.2.1 (585 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32931094|gb|CF035906.1|CF035906 QCG24d02.yg QCG Zea mays cDNA... 950 0.0 gi|32930488|gb|CF035300.1|CF035300 QCG16f05.yg QCG Zea mays cDNA... 930 0.0 gi|71760561|gb|DR958498.1|DR958498 ZM_BFb0061C10.f ZM_BFb Zea ma... 914 0.0 gi|76292784|gb|DV032352.1|DV032352 ZM_BFb0156B18.f ZM_BFb Zea ma... 914 0.0 gi|78077037|gb|DV505471.1|DV505471 ZM_BFb0182M23.f ZM_BFb Zea ma... 914 0.0 gi|78110846|gb|DV529244.1|DV529244 ZM_BFb0218A18.f ZM_BFb Zea ma... 914 0.0 gi|50323256|gb|CO518382.1|CO518382 3530_1_119_1_H11.x_1 3530 - F... 894 0.0 gi|21987841|gb|BQ779369.1|BQ779369 946118H10.y1 946 - tassel pri... 864 0.0 gi|20803105|gb|BQ294155.1|BQ294155 1091026E11.y2 1091 - Immature... 835 0.0 gi|21843341|gb|BQ703922.1|BQ703922 946107F02.y1 946 - tassel pri... 517 e-145 gi|91051000|gb|EB161418.1|EB161418 ZM_BFb0300J11.f ZM_BFb Zea ma... 474 e-132 gi|29167864|gb|CB411124.1|CB411124 3529_1_57_1_G09.y_1 3529 - 2 ... 44 0.020 gi|31909155|gb|CD650777.1|CD650777 3529_1_129_1_F12.y_2 3529 - 2... 44 0.020 gi|78084349|gb|DV512742.1|DV512742 ZM_BFb0193I23.r ZM_BFb Zea ma... 44 0.020 gi|76290751|gb|DV030319.1|DV030319 ZM_BFb0153B23.r ZM_BFb Zea ma... 40 0.31 gi|90704952|gb|AC184049.1| Zea mays chromosome UNK clone ZMMBBb-... 36 4.8 gi|85861415|gb|AC177905.1| Zea mays chromosome UNK clone CH201-1... 36 4.8 >gi|32931094|gb|CF035906.1|CF035906 QCG24d02.yg QCG Zea mays cDNA clone QCG24d02, mRNA sequence Length = 576 Score = 950 bits (479), Expect = 0.0 Identities = 497/506 (98%) Strand = Plus / Plus Query: 11 ccattccacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaa 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 ccattccacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaa 65 Query: 71 ctagatgcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccat 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 ctagatgcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccat 125 Query: 131 ggagatactctatcttggccattacattcagcaccgtcctcccatcttaccagcaggctt 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 ggagatactctatcttggccattacattcagcaccgtcctcccatcttaccagcaggctt 185 Query: 191 ctccacttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactcca 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ctccacttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactcca 245 Query: 251 gatcgcctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacag 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gatcgcctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacag 305 Query: 311 actggatgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagta 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 actggatgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagta 365 Query: 371 gctcttggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagcc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gctcttggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagcc 425 Query: 431 gtcaaagaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttn 490 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 426 gtcaaagaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcattttta 485 Query: 491 ngctgaatagcnctnngcncacccag 516 |||||||||| || || ||||||| Sbjct: 486 agctgaatagccctccgcacacccag 511 >gi|32930488|gb|CF035300.1|CF035300 QCG16f05.yg QCG Zea mays cDNA clone QCG16f05, mRNA sequence Length = 633 Score = 930 bits (469), Expect = 0.0 Identities = 503/516 (97%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 1 acaaccattcccattccacattgctggaacgtccaaatttccctgaggacacaacttggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 acaaccattcccattccacattgctggaacgtccaaatttccctgaggacacaacttggt 61 Query: 61 tcttttagaactagatgcagaaagggaatgagaaacagagacagaaccaccagctatctc 120 |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 62 tcttttagaactagatgcagaaagggtttgtgaaacagagacagaaccaccagctatctc 121 Query: 121 gatttcccatggagatactctatcttggccattacattcagcaccgtcctcccatcttac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gatttcccatggagatactctatcttggccattacattcagcaccgtcctcccatcttac 181 Query: 181 cagcaggcttctccacttcgagccaggccatttcatgggatctatttcactaatgcgaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cagcaggcttctccacttcgagccaggccatttcatgggatctatttcactaatgcgaac 241 Query: 241 aaccactccagatcgcctttcactaacatcttcattatggcactgaaagttgatccttgc 300 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 aaccactccagatcgcc-ttcactaacatcttcattatggcactgaaagttgatccttgc 300 Query: 301 tccaatacagactggatgattgaggctcttcaggaacttagcgtatggaataatatattc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tccaatacagactggatgattgaggctcttcaggaacttagcgtatggaataatatattc 360 Query: 361 tgaagcagtagctcttggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaagcagtagctcttggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatc 420 Query: 421 agctacagccgtcaaagaatgccgctttgtgctgtcactattgaaatcttcaaaaagggn 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agctacagccgtcaaagaatgccgctttgtgctgtcactattgaaatcttcaaaaagggc 480 Query: 481 nncatttttnngctgaatagcnctnngcncacccag 516 ||||||| |||||||||| || || ||||||| Sbjct: 481 ctcatttttaagctgaatagccctccgcacacccag 516 >gi|71760561|gb|DR958498.1|DR958498 ZM_BFb0061C10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 763 Score = 914 bits (461), Expect = 0.0 Identities = 488/500 (97%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 208 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 209 gcagaaagagaatgagaaacagagacagaaccaccagctatctcgatctcccatggagat 268 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 328 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 388 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 389 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagaccgga 448 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 508 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 568 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctga 496 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 569 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagctga 628 Query: 497 atagcnctnngcncacccag 516 ||||| || || ||||||| Sbjct: 629 atagccctccgcacacccag 648 >gi|76292784|gb|DV032352.1|DV032352 ZM_BFb0156B18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 724 Score = 914 bits (461), Expect = 0.0 Identities = 488/500 (97%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 149 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 150 gcagaaagagaatgagaaacagagacagaaccaccagctatctcgatctcccatggagat 209 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 269 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 329 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 330 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagaccgga 389 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 449 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 509 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctga 496 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 510 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagctga 569 Query: 497 atagcnctnngcncacccag 516 ||||| || || ||||||| Sbjct: 570 atagccctccgcacacccag 589 >gi|78077037|gb|DV505471.1|DV505471 ZM_BFb0182M23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 700 Score = 914 bits (461), Expect = 0.0 Identities = 488/500 (97%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 208 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 209 gcagaaagagaatgagaaacagagacagaaccaccagctatctcgatctcccatggagat 268 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 328 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 388 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 389 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagaccgga 448 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 508 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 568 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctga 496 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 569 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagctga 628 Query: 497 atagcnctnngcncacccag 516 ||||| || || ||||||| Sbjct: 629 atagccctccgcacacccag 648 >gi|78110846|gb|DV529244.1|DV529244 ZM_BFb0218A18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 731 Score = 914 bits (461), Expect = 0.0 Identities = 488/500 (97%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 118 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119 gcagaaagagaatgagaaacagagacagaaccaccagctatctcgatctcccatggagat 178 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 238 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 298 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 299 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagaccgga 358 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 418 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 478 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctga 496 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 479 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagctga 538 Query: 497 atagcnctnngcncacccag 516 ||||| || || ||||||| Sbjct: 539 atagccctccgcacacccag 558 >gi|50323256|gb|CO518382.1|CO518382 3530_1_119_1_H11.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 549 Score = 894 bits (451), Expect = 0.0 Identities = 460/463 (99%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 143 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 144 gcagaaagagaatgagaaacagagacagaaccaccagctatctcgatctcccatggagat 203 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 263 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 323 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 324 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagaccgga 383 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctctt 443 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 503 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaaggg 479 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gaatgccgctttgtgctgtcactattgaaatcttcaaaaaggg 546 >gi|21987841|gb|BQ779369.1|BQ779369 946118H10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 622 Score = 864 bits (436), Expect = 0.0 Identities = 481/499 (96%) Strand = Plus / Minus Query: 18 acattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagatg 77 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 575 acattgctggaacgtccaaatttccctgaggacacaacttggttcttttagcactagatg 516 Query: 78 cagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagata 137 |||| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 515 cagacagagaatgagaaacagggacagaaccaccagctatctcgatctcccatggagata 456 Query: 138 ctctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccact 197 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ctcgatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccact 396 Query: 198 tcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgcc 257 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 tcgagccaggccatttaatgggatctatttcactaatgcgaacaaccactccagatcgcc 336 Query: 258 tttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactggat 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 tttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactggat 276 Query: 318 gattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctcttg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagtagctcttg 216 Query: 378 gattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaag 437 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 215 gattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctactgccatcaaag 156 Query: 438 aatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctgaa 497 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 155 aatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagctgaa 96 Query: 498 tagcnctnngcncacccag 516 |||| || || ||||||| Sbjct: 95 tagccctccgcacacccag 77 >gi|20803105|gb|BQ294155.1|BQ294155 1091026E11.y2 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 573 Score = 835 bits (421), Expect = 0.0 Identities = 479/500 (95%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 18 acattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagatg 77 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 529 acattgctggaacgtccaaatttccctgaggacacaacttggttcttttagcactagatg 470 Query: 78 cagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagata 137 |||| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 469 cagacagagaatgagaaacagggacagaaccaccagctatctcgatctcccatggagata 410 Query: 138 ctctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccact 197 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ctcgatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccact 350 Query: 198 tcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgcc 257 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 tcgagccaggccatttaatgggatctatttcactaatgcgaacaaccactccagatcgcc 290 Query: 258 tttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactggat 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 tttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactggat 230 Query: 318 gattgaggctcttcaggaacttagcgtatggaataatatattctgaagcag-tagctctt 376 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 229 gattgaggctcttcaggaacttagcgtatggaataatatattctgaaacagatagctctt 170 Query: 377 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagccgtcaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 169 ggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctactgccatcaaa 110 Query: 437 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttnngctga 496 ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 109 gaatgccgctttgtgctgtcactattgaaatcttcaaaaagggcctcatttttaagatga 50 Query: 497 atagcnctnngcncacccag 516 ||||| || || ||||||| Sbjct: 49 atagccctccgcacacccag 30 >gi|21843341|gb|BQ703922.1|BQ703922 946107F02.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 548 Score = 517 bits (261), Expect = e-145 Identities = 385/428 (89%) Strand = Plus / Minus Query: 71 ctagatgcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccat 130 |||||||| || || ||||||| |||||||||||| |||||||||||||| || |||||| Sbjct: 548 ctagatgcggacagagaatgagcaacagagacagagccaccagctatctcaatctcccat 489 Query: 131 ggagatactctatcttggccattacattcagcaccgtcctcccatcttaccagcaggctt 190 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 488 ggagatactctatcttggccgttacattcaacaccatcctcccatcttaccagcaggctt 429 Query: 191 ctccacttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactcca 250 |||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| Sbjct: 428 ctccacttcgagcctggccatttcatgggatctatttcactgacatgaacaaccattcca 369 Query: 251 gatcgcctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacag 310 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 368 gatcgcctttcactaacatcttcattatggcgctgtaagttgatccttgctccaatacag 309 Query: 311 actggatgattgaggctcttcaggaacttagcgtatggaataatatattctgaagcagta 370 | |||| |||| |||||||||||||||||| || ||| ||||||||||||||||| ||| Sbjct: 308 aatggaagatttaggctcttcaggaacttatggtgtggtataatatattctgaagccgta 249 Query: 371 gctcttggattgtaagaaatgtgaaaaacacttctgttcttcaaggaatcagctacagcc 430 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 248 gctcttggattgtaagaaatgtgaaaaacacttttgtgcttcaaggaatcagctacagcc 189 Query: 431 gtcaaagaatgccgctttgtgctgtcactattgaaatcttcaaaaagggnnncatttttn 490 ||| | |||||| ||||| ||||| | | ||||||| |||||||||| ||||||| Sbjct: 188 aacaatgtatgccgttttgtactgtcgcaactgaaatcgtcaaaaagggcctcattttta 129 Query: 491 ngctgaat 498 ||||||| Sbjct: 128 agctgaat 121 >gi|91051000|gb|EB161418.1|EB161418 ZM_BFb0300J11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 435 Score = 474 bits (239), Expect = e-132 Identities = 320/347 (92%) Strand = Plus / Plus Query: 17 cacattgctggaacgtccaaatttccctgaggacacaacttggttcttttagaactagat 76 ||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 89 cacattggtggaacgtccaaatttccctgaggacacaatttggttcttttaaaactagat 148 Query: 77 gcagaaagggaatgagaaacagagacagaaccaccagctatctcgatttcccatggagat 136 ||| |||| ||||| ||||| | |||||||| ||| ||||||| || ||||||||||| Sbjct: 149 gcaaaaagaaaatgaaaaacaaaaacagaacccccacctatctccatctcccatggagaa 208 Query: 137 actctatcttggccattacattcagcaccgtcctcccatcttaccagcaggcttctccac 196 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 209 actctatcttggccattacattcagcaccgccctcccatcttaccagcaggcttctccac 268 Query: 197 ttcgagccaggccatttcatgggatctatttcactaatgcgaacaaccactccagatcgc 256 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 269 ttcgagccaggccattttatgggatctatttcactaatgggaacaaccactccagatcgc 328 Query: 257 ctttcactaacatcttcattatggcactgaaagttgatccttgctccaatacagactgga 316 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||| Sbjct: 329 ctttcactaacatcttctttatggcactgaaagttgatccttgctccaaaacacaccgga 388 Query: 317 tgattgaggctcttcaggaacttagcgtatggaataatatattctga 363 |||||||||||| | |||||||| || |||||| |||||||||||| Sbjct: 389 agattgaggctctcccggaacttaccgaatggaaaaatatattctga 435 >gi|29167864|gb|CB411124.1|CB411124 3529_1_57_1_G09.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 574 Score = 44.1 bits (22), Expect = 0.020 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 ctcgatttcccatggagatactctat 143 |||||| ||||||||||||||||||| Sbjct: 206 ctcgatgtcccatggagatactctat 181 >gi|31909155|gb|CD650777.1|CD650777 3529_1_129_1_F12.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 584 Score = 44.1 bits (22), Expect = 0.020 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 ctcgatttcccatggagatactctat 143 |||||| ||||||||||||||||||| Sbjct: 207 ctcgatgtcccatggagatactctat 182 >gi|78084349|gb|DV512742.1|DV512742 ZM_BFb0193I23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 826 Score = 44.1 bits (22), Expect = 0.020 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 ctcgatttcccatggagatactctat 143 |||||| ||||||||||||||||||| Sbjct: 329 ctcgatgtcccatggagatactctat 304 >gi|76290751|gb|DV030319.1|DV030319 ZM_BFb0153B23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 837 Score = 40.1 bits (20), Expect = 0.31 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 aggctcttcaggaacttagc 342 |||||||||||||||||||| Sbjct: 786 aggctcttcaggaacttagc 767 >gi|90704952|gb|AC184049.1| Zea mays chromosome UNK clone ZMMBBb-618B9; ZMMBBb0618B09, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces Length = 125696 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 218 ggatctatttcactaatg 235 |||||||||||||||||| Sbjct: 70503 ggatctatttcactaatg 70486 >gi|85861415|gb|AC177905.1| Zea mays chromosome UNK clone CH201-17C8; ZMMBBc0017C08, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces Length = 210174 Score = 36.2 bits (18), Expect = 4.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 388 aatgtgaaaaacacttct 405 |||||||||||||||||| Sbjct: 67397 aatgtgaaaaacacttct 67414 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 147,096 Number of Sequences: 836351 Number of extensions: 147096 Number of successful extensions: 10409 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 10386 Number of HSP's gapped (non-prelim): 21 length of query: 585 length of database: 669,372,029 effective HSP length: 19 effective length of query: 566 effective length of database: 653,481,360 effective search space: 369870449760 effective search space used: 369870449760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)