BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QBTB.063O07F020916.3.1 (657 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|78089190|gb|DV517574.1|DV517574 ZM_BFb0201C14.r ZM_BFb Zea ma... 1253 0.0 gi|93015446|gb|EB640966.1|EB640966 ZM_BFb0330D22.r ZM_BFb Zea ma... 914 0.0 gi|86467022|gb|DY233392.1|DY233392 ZM_BFb0242P02.r ZM_BFb Zea ma... 726 0.0 gi|71427740|gb|DR808790.1|DR808790 ZM_BFb0035L04.r ZM_BFb Zea ma... 716 0.0 gi|71771960|gb|DR969897.1|DR969897 ZM_BFb0091N07.r ZM_BFb Zea ma... 716 0.0 gi|76018307|gb|DT945477.1|DT945477 ZM_BFb0132L13.r ZM_BFb Zea ma... 716 0.0 gi|78090559|gb|DV518933.1|DV518933 ZM_BFb0203C12.r ZM_BFb Zea ma... 630 e-179 gi|28930838|gb|CB334199.1|CB334199 3529_1_21_1_E03.y_2 3529 - 2 ... 571 e-161 gi|76281334|gb|DV020902.1|DV020902 ZM_BFb0139H01.r ZM_BFb Zea ma... 385 e-105 gi|33467145|gb|CF244194.1|CF244194 3530_1_27_1_E08.y_1 3530 - Fu... 42 0.087 gi|91869761|gb|EB400527.1|EB400527 ZM_BFb0305M12.f ZM_BFb Zea ma... 40 0.34 gi|5468660|gb|AI834451.1|AI834451 606068C08.x1 606 - Ear tissue ... 38 1.4 gi|5468820|gb|AI834611.1|AI834611 606070G10.x1 606 - Ear tissue ... 38 1.4 gi|9953509|gb|BE640092.1|BE640092 946046D11.x1 946 - tassel prim... 38 1.4 gi|9953510|gb|BE640093.1|BE640093 946046D11.y1 946 - tassel prim... 38 1.4 gi|14203198|gb|BG836875.1|BG836875 Zm08_01f10_A Zm08_AAFC_ECORC_... 38 1.4 gi|18162406|gb|BM332245.1|BM332245 MEST154-C08.T3 ISUM5-RN Zea m... 38 1.4 gi|28983003|gb|BQ538410.2|BQ538410 MEST600-H03.T3 ISUM4-TN Zea m... 38 1.4 gi|50330839|gb|CO525965.1|CO525965 3530_1_172_1_G04.x_1 3530 - F... 38 1.4 gi|50335013|gb|CO530139.1|CO530139 3530_1_199_1_E10.x_1 3530 - F... 38 1.4 gi|71328717|gb|DR801042.1|DR801042 ZM_BFb0024K20.f ZM_BFb Zea ma... 38 1.4 gi|71760030|gb|DR957967.1|DR957967 ZM_BFb0058F08.f ZM_BFb Zea ma... 38 1.4 gi|71760531|gb|DR958468.1|DR958468 ZM_BFb0061A22.f ZM_BFb Zea ma... 38 1.4 gi|71770985|gb|DR968922.1|DR968922 ZM_BFb0090H02.f ZM_BFb Zea ma... 38 1.4 gi|74246262|gb|DT654176.1|DT654176 ZM_BFb0127E11.f ZM_BFb Zea ma... 38 1.4 gi|76288040|gb|DV027608.1|DV027608 ZM_BFb0149C18.f ZM_BFb Zea ma... 38 1.4 gi|76916598|gb|DV166457.1|DV166457 ZM_BFb0163P13.f ZM_BFb Zea ma... 38 1.4 gi|76923865|gb|DV169700.1|DV169700 ZM_BFb0168O16.f ZM_BFb Zea ma... 38 1.4 gi|76928902|gb|DV171805.1|DV171805 ZM_BFb0172L01.r ZM_BFb Zea ma... 38 1.4 gi|78024433|gb|DV492820.1|DV492820 1000097-A12.T7-1 UGI-Reseq Ze... 38 1.4 gi|78074613|gb|DV503047.1|DV503047 ZM_BFb0178F14.f ZM_BFb Zea ma... 38 1.4 gi|78083382|gb|DV511775.1|DV511775 ZM_BFb0192C05.f ZM_BFb Zea ma... 38 1.4 gi|78108510|gb|DV526928.1|DV526928 ZM_BFb0214L23.f ZM_BFb Zea ma... 38 1.4 gi|78113834|gb|DV532223.1|DV532223 ZM_BFb0222M14.f ZM_BFb Zea ma... 38 1.4 gi|78125021|gb|DV543405.1|DV543405 ZM_BFb0239F18.f ZM_BFb Zea ma... 38 1.4 gi|84970266|gb|DW468616.1|DW468616 ZM_BFb0172L01.f ZM_BFb Zea ma... 38 1.4 gi|89248176|gb|DY619962.1|DY619962 ZM_BFb0278E08.f ZM_BFb Zea ma... 38 1.4 gi|91051255|gb|EB161673.1|EB161673 ZM_BFb0301B13.f ZM_BFb Zea ma... 38 1.4 gi|91051395|gb|EB161813.1|EB161813 ZM_BFb0301F11.f ZM_BFb Zea ma... 38 1.4 gi|91053046|gb|EB163464.1|EB163464 ZM_BFb0311F19.f ZM_BFb Zea ma... 38 1.4 gi|91869580|gb|EB400447.1|EB400447 ZM_BFb0305J21.f ZM_BFb Zea ma... 38 1.4 gi|91870990|gb|EB401185.1|EB401185 ZM_BFb0307B05.f ZM_BFb Zea ma... 38 1.4 gi|21208232|gb|AY105154.1| Zea mays PCO134624 mRNA sequence 38 1.4 gi|21208232|gb|AY105154.1| Zea mays PCO134624 mRNA sequence 38 1.4 gi|67016489|gb|CO445238.1|CO445238 MZCCL10082B01.g Maize Endospe... 36 5.4 gi|74240372|gb|DT648286.1|DT648286 ZM_BFb0109L04.f ZM_BFb Zea ma... 36 5.4 gi|293903|gb|L13301.1|MZETBPA Zea mays TATA-binding protein mRNA... 36 5.4 gi|293903|gb|L13301.1|MZETBPA Zea mays TATA-binding protein mRNA... 36 5.4 >gi|78089190|gb|DV517574.1|DV517574 ZM_BFb0201C14.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 857 Score = 1253 bits (632), Expect = 0.0 Identities = 649/652 (99%), Gaps = 2/652 (0%) Strand = Plus / Plus Query: 6 atcccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccct 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 atcccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccct 116 Query: 66 ccctccctacgcatcctctccccctcgggcgctttccccacccaatccgaccgccggggc 125 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117 ccctccctacgcatcctctccccctcga-cgctttccccacccaatccgaccgccggggc 175 Query: 126 gggcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 gggcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaat 235 Query: 186 cagcggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 cagcggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaa 295 Query: 246 cagtttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgat 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 cagtttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgat 355 Query: 306 cttggcatttcatgggaggttctgaagatgacgagccaccctcaaaacgcgcaagaacat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 cttggcatttcatgggaggttctgaagatgacgagccaccctcaaaacgcgcaagaacat 415 Query: 366 cctcagtagaatctgcaagtttaccagactgtttctcgttttcgaaattttccaatcctt 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 cctcagtagaatctgcaagtttaccagactgtttctcgttttcgaaattttccaatcctt 475 Query: 426 tgggaagtacaatggctagacctttgccttcccaagggaaagaagttatggttggttcca 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 tgggaagtacaatggctagacctttgccttcccaagggaaagaagttatggttggttcca 535 Query: 486 agggtgttattaagaaggaggaatttgttaggataatcaccaaaactctgtatagtcttg 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agggtgttattaagaaggaggaatttgttaggataatcaccaaaactctgtatagtcttg 595 Query: 546 gatatgaaaaaagtggagcagttctggaggaggaatcagggattattttacataacccta 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 gatatgaaaaaagtggagcagttctggaggaggaatcagggattattttacataacccta 655 Query: 606 tggtgaaacttttcagagaacaggtgattggatggaaattgggataatgcgg 657 ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 656 tggtgaaacttttcagagaacaggtgatt-gatggaaattgggataatgcgg 706 >gi|93015446|gb|EB640966.1|EB640966 ZM_BFb0330D22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 563 Score = 914 bits (461), Expect = 0.0 Identities = 468/469 (99%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 189 cggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaacag 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaacag 60 Query: 249 tttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgatctt 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgatctt 120 Query: 309 ggcatttcatgggaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggcatttcatgggaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcct 180 Query: 369 cagtagaatctgcaagtttaccagactgtttctcgttttcgaaattttccaatcctttgg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagtagaatctgcaagtttaccagactgtttctcgttttcgaaattttccaatcctttgg 240 Query: 429 gaagtacaatggctagacctttgccttcccaagggaaagaagttatggttggttccaagg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gaagtacaatggctagacctttgccttcccaagggaaagaagttatggttggttccaagg 300 Query: 489 gtgttattaagaaggaggaatttgttaggataatcaccaaaactctgtatagtcttggat 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgttattaagaaggaggaatttgttaggataatcaccaaaactctgtatagtcttggat 360 Query: 549 atgaaaaaagtggagcagttctggaggaggaatcagggattattttacataaccctatgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atgaaaaaagtggagcagttctggaggaggaatcagggattattttacataaccctatgg 420 Query: 609 tgaaacttttcagagaacaggtgattggatggaaattgggataatgcgg 657 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 tgaaacttttcagagaacaggtgatt-gatggaaattgggataatgcgg 468 >gi|86467022|gb|DY233392.1|DY233392 ZM_BFb0242P02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 476 Score = 726 bits (366), Expect = 0.0 Identities = 434/454 (95%), Gaps = 2/454 (0%) Strand = Plus / Plus Query: 6 atcccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccct 65 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 atcccgtttctattcaggcggttcccctctcccccaagccaaacaccaccatccttccct 83 Query: 66 ccctccctacgcatcctctccccctcgggcgctttccccacccaatccgaccgccggggc 125 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| Sbjct: 84 ccctccctacgcatcctctccccctcga-cgctttccccacccaatcagaccgcgggggg 142 Query: 126 gggcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaat 185 ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 143 gggagattccgtggagattcggcgcggattcggggctcctctcggggtttctcggaaaat 202 Query: 186 cagcggggatcgggactcccggc-tgaagaatcctctatctgtttcggtaactgtttgca 244 ||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 203 caggggggatcgggactcccggtgtgaaaaatcctctatctgtttcggtaagtgtttgca 262 Query: 245 acagtttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctga 304 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 263 acagtttgtggggagattgcataccatcaccttccctgaagtgaaaaatatatggggtga 322 Query: 305 tcttggcatttcatgggaggttctgaagatgacgagccaccctcaaaacgcgcaagaaca 364 |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 323 tcttggcatttcgtgggaggttctgaagatgaagagccaccctcaaaacgcgcaagaaca 382 Query: 365 tcctcagtagaatctgcaagtttaccagactgtttctcgttttcgaaattttccaatcct 424 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 383 tcctcagtagaatctgcaagtttaccagagtgtttctcgttttcgaaattttccaatcct 442 Query: 425 ttgggaagtacaatggctagacctttgccttccc 458 |||||||||||||||||||||||||||||||||| Sbjct: 443 ttgggaagtacaatggctagacctttgccttccc 476 >gi|71427740|gb|DR808790.1|DR808790 ZM_BFb0035L04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 814 Score = 716 bits (361), Expect = 0.0 Identities = 480/517 (92%), Gaps = 2/517 (0%) Strand = Plus / Plus Query: 141 gattcggcgcggattcggggctcctctcggggtttctcggcgaatcagcggggatcggga 200 |||||||| | ||||| |||||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 65 gattcggctcagattctgggctcctcttgtggtttctcggcgaatcggcggg-atcggga 123 Query: 201 ctcccggctgaagaatcctctatctgtttcggtaactgtttgcaacagtttgtgtggaga 260 |||||||||| |||||| || ||| ||||| |||||||||| | || ||| ||||||| Sbjct: 124 ctcccggctggagaatcttccgtctctttcgctaactgtttggatcattttacgtggaga 183 Query: 261 ttgcataccatcaccttccctgaagtgaaaaatatatgggctgatcttggcatttcatgg 320 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 184 ttgcatgccatcaccttccttgaagtgaaaaatatatgggctgatcttggcatttcatgg 243 Query: 321 gaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcctcagtagaatctg 380 |||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 244 gaggttttgaagatgatgaaccaccctcaaaacgcgcaagagcatcctcagtagaatctg 303 Query: 381 caagtttaccagactgtttctcgttttcgaaattttccaatcctttgggaagtacaatgg 440 ||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||| Sbjct: 304 caagtttaccagactgtttcttgttttcaaaatctgccaatcctttgggaagtacaatgg 363 Query: 441 ctagacctttgccttcccaagggaaagaagttatggttggttccaagggtgttattaaga 500 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 364 ctagacctttgccttcccaagggaaagaagctatggttggttccaagggtgttattaaga 423 Query: 501 aggaggaatttgttaggataatcaccaaaactctgtatagtcttggatatgaaaaaagtg 560 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 424 aggaggaatttgttaggataatcagcaaaactctgtatagtcttggatatgagaaaagtg 483 Query: 561 gagcagttctggaggaggaatcagggattattttacataaccctatggtgaaacttttca 620 ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 484 gagcagttctggaagaggaatcagggattactttacataaccctatggtgaatcttttca 543 Query: 621 gagaacaggtgattggatggaaattgggataatgcgg 657 |||| ||||||||| ||||| |||||||||||||||| Sbjct: 544 gagagcaggtgatt-gatgggaattgggataatgcgg 579 >gi|71771960|gb|DR969897.1|DR969897 ZM_BFb0091N07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 753 Score = 716 bits (361), Expect = 0.0 Identities = 480/517 (92%), Gaps = 2/517 (0%) Strand = Plus / Plus Query: 141 gattcggcgcggattcggggctcctctcggggtttctcggcgaatcagcggggatcggga 200 |||||||| | ||||| |||||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 92 gattcggctcagattctgggctcctcttgtggtttctcggcgaatcggcggg-atcggga 150 Query: 201 ctcccggctgaagaatcctctatctgtttcggtaactgtttgcaacagtttgtgtggaga 260 |||||||||| |||||| || ||| ||||| |||||||||| | || ||| ||||||| Sbjct: 151 ctcccggctggagaatcttccgtctctttcgctaactgtttggatcattttacgtggaga 210 Query: 261 ttgcataccatcaccttccctgaagtgaaaaatatatgggctgatcttggcatttcatgg 320 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 211 ttgcatgccatcaccttccttgaagtgaaaaatatatgggctgatcttggcatttcatgg 270 Query: 321 gaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcctcagtagaatctg 380 |||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 271 gaggttttgaagatgatgaaccaccctcaaaacgcgcaagagcatcctcagtagaatctg 330 Query: 381 caagtttaccagactgtttctcgttttcgaaattttccaatcctttgggaagtacaatgg 440 ||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||| Sbjct: 331 caagtttaccagactgtttcttgttttcaaaatctgccaatcctttgggaagtacaatgg 390 Query: 441 ctagacctttgccttcccaagggaaagaagttatggttggttccaagggtgttattaaga 500 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 391 ctagacctttgccttcccaagggaaagaagctatggttggttccaagggtgttattaaga 450 Query: 501 aggaggaatttgttaggataatcaccaaaactctgtatagtcttggatatgaaaaaagtg 560 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 451 aggaggaatttgttaggataatcagcaaaactctgtatagtcttggatatgagaaaagtg 510 Query: 561 gagcagttctggaggaggaatcagggattattttacataaccctatggtgaaacttttca 620 ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 511 gagcagttctggaagaggaatcagggattactttacataaccctatggtgaatcttttca 570 Query: 621 gagaacaggtgattggatggaaattgggataatgcgg 657 |||| ||||||||| ||||| |||||||||||||||| Sbjct: 571 gagagcaggtgatt-gatgggaattgggataatgcgg 606 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 ccccacccaatccgaccgc 119 ||||||||||||||||||| Sbjct: 23 ccccacccaatccgaccgc 41 >gi|76018307|gb|DT945477.1|DT945477 ZM_BFb0132L13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 731 Score = 716 bits (361), Expect = 0.0 Identities = 480/517 (92%), Gaps = 2/517 (0%) Strand = Plus / Plus Query: 141 gattcggcgcggattcggggctcctctcggggtttctcggcgaatcagcggggatcggga 200 |||||||| | ||||| |||||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 204 gattcggctcagattctgggctcctcttgtggtttctcggcgaatcggcggg-atcggga 262 Query: 201 ctcccggctgaagaatcctctatctgtttcggtaactgtttgcaacagtttgtgtggaga 260 |||||||||| |||||| || ||| ||||| |||||||||| | || ||| ||||||| Sbjct: 263 ctcccggctggagaatcttccgtctctttcgctaactgtttggatcattttacgtggaga 322 Query: 261 ttgcataccatcaccttccctgaagtgaaaaatatatgggctgatcttggcatttcatgg 320 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 323 ttgcatgccatcaccttccttgaagtgaaaaatatatgggctgatcttggcatttcatgg 382 Query: 321 gaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcctcagtagaatctg 380 |||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 383 gaggttttgaagatgatgaaccaccctcaaaacgcgcaagagcatcctcagtagaatctg 442 Query: 381 caagtttaccagactgtttctcgttttcgaaattttccaatcctttgggaagtacaatgg 440 ||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||| Sbjct: 443 caagtttaccagactgtttcttgttttcaaaatctgccaatcctttgggaagtacaatgg 502 Query: 441 ctagacctttgccttcccaagggaaagaagttatggttggttccaagggtgttattaaga 500 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 503 ctagacctttgccttcccaagggaaagaagctatggttggttccaagggtgttattaaga 562 Query: 501 aggaggaatttgttaggataatcaccaaaactctgtatagtcttggatatgaaaaaagtg 560 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 563 aggaggaatttgttaggataatcagcaaaactctgtatagtcttggatatgagaaaagtg 622 Query: 561 gagcagttctggaggaggaatcagggattattttacataaccctatggtgaaacttttca 620 ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 623 gagcagttctggaagaggaatcagggattactttacataaccctatggtgaatcttttca 682 Query: 621 gagaacaggtgattggatggaaattgggataatgcgg 657 |||| ||||||||| ||||| |||||||||||||||| Sbjct: 683 gagagcaggtgatt-gatgggaattgggataatgcgg 718 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 ccccacccaatccgaccgc 119 ||||||||||||||||||| Sbjct: 135 ccccacccaatccgaccgc 153 >gi|78090559|gb|DV518933.1|DV518933 ZM_BFb0203C12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 334 Score = 630 bits (318), Expect = e-179 Identities = 328/330 (99%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 6 atcccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccct 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 atcccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccct 65 Query: 66 ccctccctacgcatcctctccccctcgggcgctttccccacccaatccgaccgccggggc 125 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 66 ccctccctacgcatcctctccccctcga-cgctttccccacccaatccgaccgccggggc 124 Query: 126 gggcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 gggcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaat 184 Query: 186 cagcggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cagcggggatcgggactcccggctgaagaatcctctatctgtttcggtaactgtttgcaa 244 Query: 246 cagtttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgat 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cagtttgtgtggagattgcataccatcaccttccctgaagtgaaaaatatatgggctgat 304 Query: 306 cttggcatttcatgggaggttctgaagatg 335 |||||||||||||||||||||||||||||| Sbjct: 305 cttggcatttcatgggaggttctgaagatg 334 >gi|28930838|gb|CB334199.1|CB334199 3529_1_21_1_E03.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 603 Score = 571 bits (288), Expect = e-161 Identities = 382/412 (92%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 141 gattcggcgcggattcggggctcctctcggggtttctcggcgaatcagcggggatcggga 200 |||||||| | ||||| |||||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 191 gattcggctcagattctgggctcctcttgtggtttctcggcgaatcggcggg-atcggga 249 Query: 201 ctcccggctgaagaatcctctatctgtttcggtaactgtttgcaacagtttgtgtggaga 260 |||||||||| |||||| || ||| ||||| |||||||||| | || ||| ||||||| Sbjct: 250 ctcccggctggagaatcttccgtctctttcgctaactgtttggatcattttacgtggaga 309 Query: 261 ttgcataccatcaccttccctgaagtgaaaaatatatgggctgatcttggcatttcatgg 320 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ttgcatgccatcaccttccttgaagtgaaaaatatatgggctgatcttggcatttcatgg 369 Query: 321 gaggttctgaagatgacgagccaccctcaaaacgcgcaagaacatcctcagtagaatctg 380 |||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 370 gaggttttgaagatgatgaaccaccctcaaaacgcgcaagagcatcctcagtagaatctg 429 Query: 381 caagtttaccagactgtttctcgttttcgaaattttccaatcctttgggaagtacaatgg 440 ||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||| Sbjct: 430 caagtttaccagactgtttcttgttttcaaaatctgccaatcctttgggaagtacaatgg 489 Query: 441 ctagacctttgccttcccaagggaaagaagttatggttggttccaagggtgttattaaga 500 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 490 ctagacctttgccttcccaagggaaagaagctatggttggttccaagggtgttattaaga 549 Query: 501 aggaggaatttgttaggataatcaccaaaactctgtatagtcttggatatga 552 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 550 aggaggaatttgttaggataatcagcaaaactctgtatagtcttggatatga 601 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 ccccacccaatccgaccgc 119 ||||||||||||||||||| Sbjct: 122 ccccacccaatccgaccgc 140 >gi|76281334|gb|DV020902.1|DV020902 ZM_BFb0139H01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 775 Score = 385 bits (194), Expect = e-105 Identities = 204/206 (99%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 8 cccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccctcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cccgtttctattcagtcggttcccctctcccccaagccaaacaccaccatccttccctcc 60 Query: 68 ctccctacgcatcctctccccctcgggcgctttccccacccaatccgaccgccggggcgg 127 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 ctccctacgcatcctctccccctcga-cgctttccccacccaatccgaccgccggggcgg 119 Query: 128 gcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaatca 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcgattccctggagattcggcgcggattcggggctcctctcggggtttctcggcgaatca 179 Query: 188 gcggggatcgggactcccggctgaag 213 |||||||||||||||||||||||||| Sbjct: 180 gcggggatcgggactcccggctgaag 205 >gi|33467145|gb|CF244194.1|CF244194 3530_1_27_1_E08.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 753 Score = 42.1 bits (21), Expect = 0.087 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ccttccctccctccctacgca 78 ||||||||||||||||||||| Sbjct: 22 ccttccctccctccctacgca 42 >gi|91869761|gb|EB400527.1|EB400527 ZM_BFb0305M12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 556 Score = 40.1 bits (20), Expect = 0.34 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ccatccttccctccctccct 73 |||||||||||||||||||| Sbjct: 473 ccatccttccctccctccct 454 >gi|5468660|gb|AI834451.1|AI834451 606068C08.x1 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 195 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 135 accatccttccctccctcc 117 >gi|5468820|gb|AI834611.1|AI834611 606070G10.x1 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 587 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 339 accatccttccctccctcc 321 >gi|9953509|gb|BE640092.1|BE640092 946046D11.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 216 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 115 accatccttccctccctcc 97 >gi|9953510|gb|BE640093.1|BE640093 946046D11.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 498 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 154 accatccttccctccctcc 172 >gi|14203198|gb|BG836875.1|BG836875 Zm08_01f10_A Zm08_AAFC_ECORC_Fusarium_graminearum_inoculated_corn_ear Zea mays cDNA clone Zm08_01f10, mRNA sequence Length = 655 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 179 accatccttccctccctcc 161 >gi|18162406|gb|BM332245.1|BM332245 MEST154-C08.T3 ISUM5-RN Zea mays cDNA clone MEST154-C08 3', mRNA sequence Length = 640 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 466 accatccttccctccctcc 448 >gi|28983003|gb|BQ538410.2|BQ538410 MEST600-H03.T3 ISUM4-TN Zea mays cDNA clone MEST600-H03 3', mRNA sequence Length = 480 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 388 accatccttccctccctcc 370 >gi|50330839|gb|CO525965.1|CO525965 3530_1_172_1_G04.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 526 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 451 accatccttccctccctcc 433 >gi|50335013|gb|CO530139.1|CO530139 3530_1_199_1_E10.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 647 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 409 accatccttccctccctcc 391 >gi|71328717|gb|DR801042.1|DR801042 ZM_BFb0024K20.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 715 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 369 accatccttccctccctcc 351 >gi|71760030|gb|DR957967.1|DR957967 ZM_BFb0058F08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 703 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 289 accatccttccctccctcc 271 >gi|71760531|gb|DR958468.1|DR958468 ZM_BFb0061A22.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 712 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 331 accatccttccctccctcc 313 >gi|71770985|gb|DR968922.1|DR968922 ZM_BFb0090H02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 500 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 379 accatccttccctccctcc 361 >gi|74246262|gb|DT654176.1|DT654176 ZM_BFb0127E11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 724 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 364 accatccttccctccctcc 346 >gi|76288040|gb|DV027608.1|DV027608 ZM_BFb0149C18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 709 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 379 accatccttccctccctcc 361 >gi|76916598|gb|DV166457.1|DV166457 ZM_BFb0163P13.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 648 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 422 accatccttccctccctcc 404 >gi|76923865|gb|DV169700.1|DV169700 ZM_BFb0168O16.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 684 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 347 accatccttccctccctcc 329 >gi|76928902|gb|DV171805.1|DV171805 ZM_BFb0172L01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 689 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 379 accatccttccctccctcc 361 >gi|78024433|gb|DV492820.1|DV492820 1000097-A12.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 639 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 339 accatccttccctccctcc 321 >gi|78074613|gb|DV503047.1|DV503047 ZM_BFb0178F14.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 756 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 342 accatccttccctccctcc 324 >gi|78083382|gb|DV511775.1|DV511775 ZM_BFb0192C05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 667 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 303 accatccttccctccctcc 285 >gi|78108510|gb|DV526928.1|DV526928 ZM_BFb0214L23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 741 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 379 accatccttccctccctcc 361 >gi|78113834|gb|DV532223.1|DV532223 ZM_BFb0222M14.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 490 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 364 accatccttccctccctcc 346 >gi|78125021|gb|DV543405.1|DV543405 ZM_BFb0239F18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 666 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 451 accatccttccctccctcc 433 >gi|84970266|gb|DW468616.1|DW468616 ZM_BFb0172L01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 689 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 379 accatccttccctccctcc 361 >gi|89248176|gb|DY619962.1|DY619962 ZM_BFb0278E08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 497 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 363 accatccttccctccctcc 345 >gi|91051255|gb|EB161673.1|EB161673 ZM_BFb0301B13.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 570 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 309 accatccttccctccctcc 291 >gi|91051395|gb|EB161813.1|EB161813 ZM_BFb0301F11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 617 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 309 accatccttccctccctcc 291 >gi|91053046|gb|EB163464.1|EB163464 ZM_BFb0311F19.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 691 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 480 accatccttccctccctcc 462 >gi|91869580|gb|EB400447.1|EB400447 ZM_BFb0305J21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 631 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 364 accatccttccctccctcc 346 >gi|91870990|gb|EB401185.1|EB401185 ZM_BFb0307B05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 766 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 335 accatccttccctccctcc 317 >gi|21208232|gb|AY105154.1| Zea mays PCO134624 mRNA sequence Length = 1194 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 579 accatccttccctccctcc 597 >gi|21208232|gb|AY105154.1| Zea mays PCO134624 mRNA sequence Length = 1194 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 accatccttccctccctcc 71 ||||||||||||||||||| Sbjct: 579 accatccttccctccctcc 597 >gi|67016489|gb|CO445238.1|CO445238 MZCCL10082B01.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 889 Score = 36.2 bits (18), Expect = 5.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 57 tccttccctccctccctacgca 78 |||| ||||||||||||||||| Sbjct: 764 tcctcccctccctccctacgca 785 >gi|74240372|gb|DT648286.1|DT648286 ZM_BFb0109L04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 560 Score = 36.2 bits (18), Expect = 5.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 54 ccatccttccctccctcc 71 |||||||||||||||||| Sbjct: 306 ccatccttccctccctcc 289 >gi|293903|gb|L13301.1|MZETBPA Zea mays TATA-binding protein mRNA, complete cds Length = 1353 Score = 36.2 bits (18), Expect = 5.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 141 gattcggcgcggattcgg 158 |||||||||||||||||| Sbjct: 55 gattcggcgcggattcgg 72 >gi|293903|gb|L13301.1|MZETBPA Zea mays TATA-binding protein mRNA, complete cds Length = 1353 Score = 36.2 bits (18), Expect = 5.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 141 gattcggcgcggattcgg 158 |||||||||||||||||| Sbjct: 55 gattcggcgcggattcgg 72 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 243,846 Number of Sequences: 836351 Number of extensions: 243846 Number of successful extensions: 19791 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 19721 Number of HSP's gapped (non-prelim): 56 length of query: 657 length of database: 669,372,029 effective HSP length: 19 effective length of query: 638 effective length of database: 653,481,360 effective search space: 416921107680 effective search space used: 416921107680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)