BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QAI15h08.yg.2.1 (557 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|56691572|gb|CX129475.1|CX129475 QAI15h08.yg QAI Zea mays cDNA... 1053 0.0 gi|89242036|dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine ... 1001 0.0 gi|89242036|dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine ... 1001 0.0 gi|89242032|dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine ... 835 0.0 gi|89242034|dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine... 835 0.0 gi|89242034|dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine... 835 0.0 gi|89242032|dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine ... 835 0.0 gi|44900778|gb|CK827323.1|CK827323 zmrsub1_0B10-008-d08.s4 zmrsu... 161 1e-37 gi|12060391|dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine ki... 72 8e-11 gi|92142261|dbj|BD294418.1| MICROORGANISM MIXTURE USED FOR MEASU... 72 8e-11 gi|12060391|dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine ki... 72 8e-11 gi|71770407|gb|DR968344.1|DR968344 ZM_BFb0089J22.r ZM_BFb Zea ma... 66 5e-09 gi|89242030|dbj|AB206390.1| Zea mays ZmHK1a2 mRNA for histidine ... 64 2e-08 gi|89242030|dbj|AB206390.1| Zea mays ZmHK1a2 mRNA for histidine ... 64 2e-08 gi|58082256|gb|AC155394.2| Zea mays strain B73 clone ZMMBBb0159H... 62 8e-08 gi|71324120|gb|DR798755.1|DR798755 ZM_BFb0021G17.r ZM_BFb Zea ma... 44 0.019 gi|18176720|gb|BM351653.1|BM351653 MEST344-D07.T3 ISUM5-RN Zea m... 40 0.29 gi|56382305|gb|CV984974.1|CV984974 EST4510 Zea mays embryo sac c... 38 1.1 gi|91630497|gb|AC185110.1| Zea mays chromosome UNK clone CH201-5... 38 1.1 gi|32847797|gb|CD987478.1|CD987478 QAO1c08.yg QAO Zea mays cDNA ... 36 4.5 gi|33101689|gb|CF061649.1|CF061649 QCT23d05.yg QCT Zea mays cDNA... 36 4.5 gi|86471627|gb|DY237997.1|DY237997 ZM_BFb0255I17.f ZM_BFb Zea ma... 36 4.5 gi|91065003|gb|AC184779.1| Zea mays chromosome UNK clone CH201-2... 36 4.5 >gi|56691572|gb|CX129475.1|CX129475 QAI15h08.yg QAI Zea mays cDNA clone QAI15h08, mRNA sequence Length = 577 Score = 1053 bits (531), Expect = 0.0 Identities = 541/546 (99%) Strand = Plus / Plus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 81 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 141 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 201 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 261 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 321 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 381 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 441 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 442 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccggacatca 501 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtacctgc 540 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 502 tgtcgagcccctcgatgtaggagacggtctcctgcgagtatacaacgggcgcgtacctgc 561 Query: 541 ccgggc 546 |||||| Sbjct: 562 ccgggc 567 >gi|89242036|dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine kinase, complete cds Length = 3033 Score = 1001 bits (505), Expect = 0.0 Identities = 527/536 (98%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagaggaacttctgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 886 caagagggttcgaaatgtttgtgacatcataaacatttatcaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcagaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 586 tgtcgagcccctcgatgtaggagacggtctcctgcgagtatacaacgggcgcgtac 531 >gi|89242036|dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine kinase, complete cds Length = 3033 Score = 1001 bits (505), Expect = 0.0 Identities = 527/536 (98%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagaggaacttctgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 886 caagagggttcgaaatgtttgtgacatcataaacatttatcaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcagaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 586 tgtcgagcccctcgatgtaggagacggtctcctgcgagtatacaacgggcgcgtac 531 >gi|89242032|dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, complete cds Length = 3046 Score = 835 bits (421), Expect = 0.0 Identities = 506/536 (94%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 ||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaatacaccagatgacgaagatattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1006 gctgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcgccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagagaaacttccgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caagagggttcgaactgtttgtgacatcataaacatttaccaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgatcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaagaaagatcaacatggtaga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaacggtctagtaagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcaaaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||| ||||| |||||||||||||||||| || || ||||||||| Sbjct: 586 tgtcgagcccctcaatgtaggagacggtctcctgcgagtagacgaccggcgcgtac 531 >gi|89242034|dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds Length = 3046 Score = 835 bits (421), Expect = 0.0 Identities = 506/536 (94%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 ||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaatacaccagatgacgaagatattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1006 gctgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcgccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagagaaacttccgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caagagggttcgaactgtttgtgacatcataaacatttaccaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgatcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaagaaagatcgacatggtaga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaacggtctagtaagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcaaaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||| ||||| |||||||||||||||||| || || ||||||||| Sbjct: 586 tgtcgagcccctcaatgtaggagacggtctcctgcgagtaaacgaccggcgcgtac 531 >gi|89242034|dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds Length = 3046 Score = 835 bits (421), Expect = 0.0 Identities = 506/536 (94%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 ||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaatacaccagatgacgaagatattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1006 gctgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcgccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagagaaacttccgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caagagggttcgaactgtttgtgacatcataaacatttaccaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgatcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaagaaagatcgacatggtaga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaacggtctagtaagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcaaaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||| ||||| |||||||||||||||||| || || ||||||||| Sbjct: 586 tgtcgagcccctcaatgtaggagacggtctcctgcgagtaaacgaccggcgcgtac 531 >gi|89242032|dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, complete cds Length = 3046 Score = 835 bits (421), Expect = 0.0 Identities = 506/536 (94%) Strand = Plus / Minus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 ||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||| Sbjct: 1066 accccacaagcatacatatgacaaatacaccagatgacgaagatattgcagaccatggga 1007 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcaccaaaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1006 gctgaggcttgtttctgtatctgcaaaccatatgatgctttctgaatggatcgccaaaat 947 Query: 121 ctagcatgcagatgtgcgatgatgaggggttgccaagaggaacttctgatccatacatga 180 ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 946 ctagcatgcagatgtgcgatggtgaggggttgccaagagaaacttccgatccatacatga 887 Query: 181 caagagggttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccag 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caagagggttcgaactgtttgtgacatcataaacatttaccaccaattcctgattgccag 827 Query: 241 ctagctgcctcaacaaattttccactaatgattctacatcaaatgctcccccaaggtatc 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 826 ctagctgcctcaacaaattttccactaatgattctacatcaaatgatcccccaaggtatc 767 Query: 301 ctgcggtggcagcaacacgatcctcctccttggcatcagaaggaagatccgcatgataga 360 |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| Sbjct: 766 ctgcggtggcagcaacacgatcctcctccttggcatcagaagaaagatcaacatggtaga 707 Query: 361 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaatggtcgagtgagaa 420 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 706 caggaaaagtcaatacgacacccaggtgattcgacatgagccggaacggtctagtaagaa 647 Query: 421 ctgccttccccgatgctcttgacctcaaaatattctcacggtcctcctcgccnnacatca 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 646 ctgccttccccgatgctcttgacctcaaaatgttctcacggtcctcctcgccggacatca 587 Query: 481 tgtcgagcccctcgatgtannngacggtctcctgcgagtatacaacgggcgcgtac 536 ||||||||||||| ||||| |||||||||||||||||| || || ||||||||| Sbjct: 586 tgtcgagcccctcaatgtaggagacggtctcctgcgagtagacgaccggcgcgtac 531 >gi|44900778|gb|CK827323.1|CK827323 zmrsub1_0B10-008-d08.s4 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 820 Score = 161 bits (81), Expect = 1e-37 Identities = 99/105 (94%) Strand = Plus / Plus Query: 1 accccacaagcatacatatgacaaagacaccagatggggtagaaattgcagaccatggga 60 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 716 accccacaagcatacatatgacaaagacaacagatggcaaagaaattgcagaccatggga 775 Query: 61 catgaggcttgtttctgtatctgcaaaccatatgatgctttctga 105 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 gctgaggcttgtttctgtatctgcaaaccatatgatgctttctga 820 >gi|12060391|dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine kinase 1, complete cds Length = 3041 Score = 71.9 bits (36), Expect = 8e-11 Identities = 78/92 (84%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 858 tttgtgacatcatagacatttaccacaatatcctgattgccagcaagtttgctcaacaaa 799 Query: 258 ttttccactaatgattctacatcaaatgctcc 289 || ||||| | ||| || |||||||| ||||| Sbjct: 798 ttctccacaagtgactccacatcaaaggctcc 767 >gi|92142261|dbj|BD294418.1| MICROORGANISM MIXTURE USED FOR MEASUREMENT OF ENVIRONMENTAL FACTORS Length = 3041 Score = 71.9 bits (36), Expect = 8e-11 Identities = 78/92 (84%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 858 tttgtgacatcatagacatttaccacaatatcctgattgccagcaagtttgctcaacaaa 799 Query: 258 ttttccactaatgattctacatcaaatgctcc 289 || ||||| | ||| || |||||||| ||||| Sbjct: 798 ttctccacaagtgactccacatcaaaggctcc 767 >gi|12060391|dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine kinase 1, complete cds Length = 3041 Score = 71.9 bits (36), Expect = 8e-11 Identities = 78/92 (84%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 858 tttgtgacatcatagacatttaccacaatatcctgattgccagcaagtttgctcaacaaa 799 Query: 258 ttttccactaatgattctacatcaaatgctcc 289 || ||||| | ||| || |||||||| ||||| Sbjct: 798 ttctccacaagtgactccacatcaaaggctcc 767 >gi|71770407|gb|DR968344.1|DR968344 ZM_BFb0089J22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 849 Score = 65.9 bits (33), Expect = 5e-09 Identities = 86/104 (82%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||||||||| | ||||||| ||||| || | ||||||||| Sbjct: 822 tttgtgacatcatagacatttaccacaatatcctgatgnccagcaagtttgctcaacaaa 763 Query: 258 ttttccactaatgattctacatcaaatgctcccccaaggtatcc 301 || ||||| | ||| || |||||||| ||||| ||||| ||||| Sbjct: 762 ttctccacaagtgactccacatcaaaggctccaccaagatatcc 719 >gi|89242030|dbj|AB206390.1| Zea mays ZmHK1a2 mRNA for histidine kinase, complete cds Length = 2972 Score = 63.9 bits (32), Expect = 2e-08 Identities = 86/104 (82%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||| ||||| | |||||||||||||| || | |||| |||| Sbjct: 794 tttgtgacatcatagacattcaccacaatatcctgattgccagcaagtttgctcagcaaa 735 Query: 258 ttttccactaatgattctacatcaaatgctcccccaaggtatcc 301 || ||||| | ||| || |||||||| ||||| ||||| ||||| Sbjct: 734 ttctccacaagtgactccacatcaaacgctccaccaagatatcc 691 >gi|89242030|dbj|AB206390.1| Zea mays ZmHK1a2 mRNA for histidine kinase, complete cds Length = 2972 Score = 63.9 bits (32), Expect = 2e-08 Identities = 86/104 (82%) Strand = Plus / Minus Query: 198 tttgtgacatcataaacatttaccaccaattcctgattgccagctagctgcctcaacaaa 257 |||||||||||||| ||||| ||||| | |||||||||||||| || | |||| |||| Sbjct: 794 tttgtgacatcatagacattcaccacaatatcctgattgccagcaagtttgctcagcaaa 735 Query: 258 ttttccactaatgattctacatcaaatgctcccccaaggtatcc 301 || ||||| | ||| || |||||||| ||||| ||||| ||||| Sbjct: 734 ttctccacaagtgactccacatcaaacgctccaccaagatatcc 691 >gi|58082256|gb|AC155394.2| Zea mays strain B73 clone ZMMBBb0159H14, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 145667 Score = 61.9 bits (31), Expect = 8e-08 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ttcgaaatgtttgtgacatcataaacatttaccaccaattcctgattgccagctagctg 247 |||||||| ||||| ||||||||||| |||||||||| || || |||||||||||||| Sbjct: 134822 ttcgaaatatttgtttcatcataaacagttaccaccaaatcttgtttgccagctagctg 134764 >gi|71324120|gb|DR798755.1|DR798755 ZM_BFb0021G17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 914 Score = 44.1 bits (22), Expect = 0.019 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 tttgtgacatcataaacatttaccac 223 |||||||||||||| ||||||||||| Sbjct: 884 tttgtgacatcatagacatttaccac 909 >gi|18176720|gb|BM351653.1|BM351653 MEST344-D07.T3 ISUM5-RN Zea mays cDNA clone MEST344-D07 3', mRNA sequence Length = 577 Score = 40.1 bits (20), Expect = 0.29 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaattttccactaatgattc 274 |||||||||||||||||||| Sbjct: 98 aaattttccactaatgattc 79 >gi|56382305|gb|CV984974.1|CV984974 EST4510 Zea mays embryo sac cDNA library Zea mays cDNA clone ES9766 5' similar to lipase-like protein, mRNA sequence Length = 255 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 agcatacatatgacaaaga 27 ||||||||||||||||||| Sbjct: 190 agcatacatatgacaaaga 172 >gi|91630497|gb|AC185110.1| Zea mays chromosome UNK clone CH201-528E5; ZMMBBc0528E05, *** SEQUENCING IN PROGRESS ***, 25 unordered pieces Length = 182209 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 agcatacatatgacaaaga 27 ||||||||||||||||||| Sbjct: 107580 agcatacatatgacaaaga 107598 >gi|32847797|gb|CD987478.1|CD987478 QAO1c08.yg QAO Zea mays cDNA clone QAO1c08, mRNA sequence Length = 355 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 529 gcgcgtacctgcccgggc 546 |||||||||||||||||| Sbjct: 328 gcgcgtacctgcccgggc 345 >gi|33101689|gb|CF061649.1|CF061649 QCT23d05.yg QCT Zea mays cDNA clone QCT23d05, mRNA sequence Length = 350 Score = 36.2 bits (18), Expect = 4.5 Identities = 21/22 (95%) Strand = Plus / Plus Query: 525 acgggcgcgtacctgcccgggc 546 |||||| ||||||||||||||| Sbjct: 320 acgggcccgtacctgcccgggc 341 >gi|86471627|gb|DY237997.1|DY237997 ZM_BFb0255I17.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 662 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 102 ctgaatggatcaccaaaa 119 |||||||||||||||||| Sbjct: 175 ctgaatggatcaccaaaa 192 >gi|91065003|gb|AC184779.1| Zea mays chromosome UNK clone CH201-218D15; ZMMBBc0218D15, *** SEQUENCING IN PROGRESS ***, 16 unordered pieces Length = 187238 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 202 tgacatcataaacattta 219 |||||||||||||||||| Sbjct: 73895 tgacatcataaacattta 73878 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 213,067 Number of Sequences: 836351 Number of extensions: 213067 Number of successful extensions: 21567 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21523 Number of HSP's gapped (non-prelim): 44 length of query: 557 length of database: 669,372,029 effective HSP length: 19 effective length of query: 538 effective length of database: 653,481,360 effective search space: 351572971680 effective search space used: 351572971680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)