BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QAF41c07.yg.2.1 (691 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|56691579|gb|CX129482.1|CX129482 QAO2f02.yg QAO Zea mays cDNA ... 1009 0.0 gi|24763681|gb|CA398852.1|CA398852 EL01N0311A12.g Endosperm_3 Ze... 989 0.0 gi|61236824|gb|DN586547.1|DN586547 EST6538 Zea mays embryo sac c... 888 0.0 gi|60393931|gb|DN226801.1|DN226801 MEST1195_E01.T7-1 UGA-ZmSAM-X... 194 1e-47 gi|78118622|gb|DV537006.1|DV537006 ZM_BFb0229L22.r ZM_BFb Zea ma... 90 4e-16 gi|58082375|gb|AC155515.2| Zea mays strain B73 clone ZMMBBc0059O... 70 4e-10 gi|91982820|gb|AC185276.1| Zea mays chromosome UNK clone CH201-3... 62 1e-07 gi|21210805|gb|AY107727.1| Zea mays PCO075555 mRNA sequence 56 6e-06 gi|21210805|gb|AY107727.1| Zea mays PCO075555 mRNA sequence 56 6e-06 gi|88687866|gb|AC182833.1| Zea mays chromosome UNK clone CH201-1... 48 0.001 gi|18659825|gb|BM500541.1|BM500541 PAC000000000632 Pioneer AF-1 ... 46 0.006 gi|31355839|gb|CD440196.1|CD440196 EL01N0551H11.b Endosperm_5 Ze... 44 0.023 gi|60353664|gb|DN220637.1|DN220637 MEST1092_E08.T7-1 UGA-ZmSAM-X... 44 0.023 gi|60354382|gb|DN221355.1|DN221355 MEST1112_C03.T7-1 UGA-ZmSAM-X... 44 0.023 gi|67011888|gb|CO440637.1|CO440637 MZCCL10026E12.g Maize Endospe... 40 0.36 gi|89257745|gb|AC177880.2| Zea mays chromosome UNK clone ZMMBBb-... 40 0.36 gi|89257709|gb|AC177820.2| Zea mays chromosome UNK clone CH201-2... 40 0.36 gi|60354962|gb|DN221935.1|DN221935 MEST1121_E11.T7-1 UGA-ZmSAM-X... 38 1.4 gi|22603800|dbj|BD058194.1| Secreted expressed sequence tags (sE... 38 1.4 gi|58082325|gb|AC155464.2| Zea mays strain B73 clone ZMMBBb0518C... 38 1.4 gi|60401297|gb|DN234104.1|DN234104 MEST1189_H09.T7-1 UGA-ZmSAM-X... 36 5.7 gi|61119058|gb|DN560019.1|DN560019 E8-C04-T7 E7PCR Zea mays cDNA... 36 5.7 gi|38304868|gb|AY265854.1| Zea mays roothairless 1 (rth1) gene, ... 36 5.7 gi|91630502|gb|AC185115.1| Zea mays chromosome UNK clone CH201-4... 36 5.7 gi|91206527|gb|AC184874.1| Zea mays chromosome UNK clone CH201-1... 36 5.7 gi|90568151|gb|AC183939.1| Zea mays chromosome UNK clone CH201-2... 36 5.7 >gi|56691579|gb|CX129482.1|CX129482 QAO2f02.yg QAO Zea mays cDNA clone QAO2f02, mRNA sequence Length = 514 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 1 acacatctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtg 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2 acacatctcggctgagaacttgctcaccactgcctccagcaactttcccctcaaatagtg 61 Query: 61 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 121 Query: 121 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 181 Query: 181 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 241 Query: 241 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 301 Query: 301 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 361 Query: 361 gctccctcacacctaggattgtgggcttccgtatgccatgttttccatgagcattatgaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gctccctcacacctaggattgtgggcttccgtatgccatgttttccatgagcattatgaa 421 Query: 421 attcttcaagtaaatttctcattttcattgcttcctccaagtagttatcctgattcatat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 attcttcaagtaaatttctcattttcattgcttcctccaagtagttatcctgattcatat 481 Query: 481 cgatcgtctgaactgcatctcctcgagtgaaga 513 ||||||||||||||||||||||||||||||||| Sbjct: 482 cgatcgtctgaactgcatctcctcgagtgaaga 514 >gi|24763681|gb|CA398852.1|CA398852 EL01N0311A12.g Endosperm_3 Zea mays cDNA, mRNA sequence Length = 798 Score = 989 bits (499), Expect = 0.0 Identities = 505/507 (99%) Strand = Plus / Minus Query: 1 acacatctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 acacatctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtg 455 Query: 61 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 395 Query: 121 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 335 Query: 181 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 275 Query: 241 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 215 Query: 301 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 155 Query: 361 gctccctcacacctaggattgtgggcttccgtatgccatgttttccatgagcattatgaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gctccctcacacctaggattgtgggcttccgtatgccatgttttccatgagcattatgaa 95 Query: 421 attcttcaagtaaatttctcattttcattgcttcctccaagtagttatcctgattcatat 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 attcttcaagtaaatttcgcattttcattgcttcctccaagtagttatcctgattcatat 35 Query: 481 cgatcgtctgaactgcatctcctcgag 507 |||||||||| |||||||||||||||| Sbjct: 34 cgatcgtctggactgcatctcctcgag 8 >gi|61236824|gb|DN586547.1|DN586547 EST6538 Zea mays embryo sac cDNA library Zea mays cDNA clone ES14453 5' similar to beta 1,3 glucan synthase, mRNA sequence Length = 471 Score = 888 bits (448), Expect = 0.0 Identities = 454/456 (99%) Strand = Plus / Minus Query: 1 acacatctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtg 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 acacatttcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtg 399 Query: 61 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 caatttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtga 339 Query: 121 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 tgttcccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatca 279 Query: 181 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ctcgagacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatcag 219 Query: 241 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gatgtccatagtgcattcgaactttgaggtaagcaagaacacgttgccccaaagtaacaa 159 Query: 301 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 aactagtctcctgtttcgacataaatgacgccagcgaagagacactccccgtgaatacat 99 Query: 361 gctccctcacacctaggattgtgggcttccgtatgccatgttttccatgagcattatgaa 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 98 gctccctcacacctaggattgtgggcttccgtatgccacgttttccatgagcattatgaa 39 Query: 421 attcttcaagtaaatttctcattttcattgcttcct 456 |||||||||||||||||||||||||||||||||||| Sbjct: 38 attcttcaagtaaatttctcattttcattgcttcct 3 >gi|60393931|gb|DN226801.1|DN226801 MEST1195_E01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 702 Score = 194 bits (98), Expect = 1e-47 Identities = 121/130 (93%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 511 agattatggcatgg-ttttggttctcaggtntgccttcaccnagcttggggttcccaggc 569 |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 3 agattatggcatgggttttggttctcaggtttgccttcaccaagcttggggttcccaggc 62 Query: 570 aatttaatgcagtatatttcttggtctttgccatgaacatcannctncacnagcttggan 629 |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 63 aatttaatgcagtatatttcttggtctttgccatgaacatcagccttcacaagcttggaa 122 Query: 630 naatactctc 639 ||||||||| Sbjct: 123 taatactctc 132 >gi|78118622|gb|DV537006.1|DV537006 ZM_BFb0229L22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 835 Score = 89.7 bits (45), Expect = 4e-16 Identities = 186/233 (79%) Strand = Plus / Minus Query: 6 tctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtgcaatt 65 |||||||| |||||||| |||||||| || ||||||||||| || |||||||||||||| Sbjct: 235 tctcggctaagaacttgttcaccatttccaccagcaacttttccttcaaatagtgcaatc 176 Query: 66 tggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgtgatgttc 125 || || | |||||||| | ||||| || ||||| ||||||||||| || || ||| Sbjct: 175 tgattaagtccaacatccctacctttgccaacctgaatatattcatgatgagttatgcat 116 Query: 126 ccttggcgcaaagtcgaattgaacccggcatatatatcttcgcttatattaatcactcga 185 ||||| |||| ||| || ||||| || ||||||||||| || || ||||| || ||| Sbjct: 115 ccttgacgcagagttgagttgaatcctgcatatatatcctcactgatattgatgctgcga 56 Query: 186 gacgccttgctaatgccacctcgggttatgtgaaatatccgatcaaaaacatc 238 || ||||| ||||| ||||| | ||||| ||||| || | |||||||||||| Sbjct: 55 gaggccttactaattccaccccttgttatatgaaaaattctatcaaaaacatc 3 >gi|58082375|gb|AC155515.2| Zea mays strain B73 clone ZMMBBc0059O05, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces Length = 161304 Score = 69.9 bits (35), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 6 tctcggctgagaacttgctcaccattgcctccagcaactttcccctcaaatagtgcaat 64 |||||||| |||||||| |||||||| || ||||||||||| || |||||||||||||| Sbjct: 28522 tctcggctaagaacttgttcaccatttccaccagcaacttttccttcaaatagtgcaat 28464 >gi|91982820|gb|AC185276.1| Zea mays chromosome UNK clone CH201-322M15; ZMMBBc0322M15, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 163620 Score = 61.9 bits (31), Expect = 1e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 469 cctgattcatatcgatcgtctgaactgcatctcctcgagtgaagattatggcatggtttt 528 ||||||||||||| || | ||||| ||| ||||| | ||||||||||||||||| |||| Sbjct: 102385 cctgattcatatcaatggcctgaagtgcttctcccctggtgaagattatggcatgatttt 102444 Query: 529 ggttctcaggt 539 |||| |||||| Sbjct: 102445 ggttttcaggt 102455 Score = 38.2 bits (19), Expect = 1.4 Identities = 52/63 (82%) Strand = Plus / Plus Query: 284 ttgccccaaagtaacaaaactagtctcctgtttcgacataaatgacgccagcgaagagac 343 |||||| | |||||||||||| ||||| || || |||||||| | |||||||| || || Sbjct: 102032 ttgcccaatagtaacaaaactggtctcttgattggacataaaccaagccagcgacgaaac 102091 Query: 344 act 346 ||| Sbjct: 102092 act 102094 >gi|21210805|gb|AY107727.1| Zea mays PCO075555 mRNA sequence Length = 2352 Score = 56.0 bits (28), Expect = 6e-06 Identities = 47/54 (87%) Strand = Plus / Minus Query: 501 cctcgagtgaagattatggcatggttttggttctcaggtntgccttcaccnagc 554 ||||| ||||| |||||||||||||| |||||||| ||| | |||||||| ||| Sbjct: 252 cctcgtgtgaaaattatggcatggttctggttctctggttttccttcacctagc 199 >gi|21210805|gb|AY107727.1| Zea mays PCO075555 mRNA sequence Length = 2352 Score = 56.0 bits (28), Expect = 6e-06 Identities = 47/54 (87%) Strand = Plus / Minus Query: 501 cctcgagtgaagattatggcatggttttggttctcaggtntgccttcaccnagc 554 ||||| ||||| |||||||||||||| |||||||| ||| | |||||||| ||| Sbjct: 252 cctcgtgtgaaaattatggcatggttctggttctctggttttccttcacctagc 199 >gi|88687866|gb|AC182833.1| Zea mays chromosome UNK clone CH201-175A10, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 174451 Score = 48.1 bits (24), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 63 atttggttcaagccaacatcacgccctttccccacctggatatattcatggtgtgt 118 |||||||||| ||||||||||| ||||| |||| ||| || |||||||| ||||| Sbjct: 126381 atttggttcattccaacatcacgtcctttgcccaactgtatgtattcatgatgtgt 126326 Score = 40.1 bits (20), Expect = 0.36 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 atcaaaaacatcaggatgtccata 250 |||||||||||||||||| ||||| Sbjct: 126136 atcaaaaacatcaggatggccata 126113 >gi|18659825|gb|BM500541.1|BM500541 PAC000000000632 Pioneer AF-1 array Zea mays cDNA, mRNA sequence Length = 413 Score = 46.1 bits (23), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Minus Query: 501 cctcgagtgaagattatggcatggttttggttctc 535 ||||| ||||| |||||||||||||| |||||||| Sbjct: 38 cctcgtgtgaaaattatggcatggttctggttctc 4 >gi|31355839|gb|CD440196.1|CD440196 EL01N0551H11.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 765 Score = 44.1 bits (22), Expect = 0.023 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 acacatctcggctgagaacttg 22 |||||||||||||||||||||| Sbjct: 32 acacatctcggctgagaacttg 11 >gi|60353664|gb|DN220637.1|DN220637 MEST1092_E08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 651 Score = 44.1 bits (22), Expect = 0.023 Identities = 34/38 (89%) Strand = Plus / Minus Query: 216 tgaaatatccgatcaaaaacatcaggatgtccatagtg 253 ||||||||||||||||||| || ||||| |||||||| Sbjct: 216 tgaaatatccgatcaaaaatgtctggatgaccatagtg 179 >gi|60354382|gb|DN221355.1|DN221355 MEST1112_C03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 737 Score = 44.1 bits (22), Expect = 0.023 Identities = 34/38 (89%) Strand = Plus / Minus Query: 216 tgaaatatccgatcaaaaacatcaggatgtccatagtg 253 ||||||||||||||||||| || ||||| |||||||| Sbjct: 262 tgaaatatccgatcaaaaatgtctggatgaccatagtg 225 >gi|67011888|gb|CO440637.1|CO440637 MZCCL10026E12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 836 Score = 40.1 bits (20), Expect = 0.36 Identities = 32/36 (88%) Strand = Plus / Minus Query: 75 ccaacatcacgccctttccccacctggatatattca 110 ||||||||||||||||| || || || ||||||||| Sbjct: 84 ccaacatcacgccctttgccaacttgaatatattca 49 >gi|89257745|gb|AC177880.2| Zea mays chromosome UNK clone ZMMBBb-542L4; ZMMBBb0542L04, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces Length = 117236 Score = 40.1 bits (20), Expect = 0.36 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 aaatttctcattttcattgcttcc 455 ||||||||||| |||||||||||| Sbjct: 29742 aaatttctcatgttcattgcttcc 29719 >gi|89257709|gb|AC177820.2| Zea mays chromosome UNK clone CH201-242M10; ZMMBBc0242M10, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 281045 Score = 40.1 bits (20), Expect = 0.36 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 agtatatttcttggtctttg 599 |||||||||||||||||||| Sbjct: 197768 agtatatttcttggtctttg 197749 >gi|60354962|gb|DN221935.1|DN221935 MEST1121_E11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 758 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 218 aaatatccgatcaaaaaca 236 ||||||||||||||||||| Sbjct: 718 aaatatccgatcaaaaaca 736 >gi|22603800|dbj|BD058194.1| Secreted expressed sequence tags (sESTs) Length = 520 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 17 aacttgctcaccattgcctccag 39 |||||||||| |||||||||||| Sbjct: 417 aacttgctcatcattgcctccag 395 >gi|58082325|gb|AC155464.2| Zea mays strain B73 clone ZMMBBb0518C23, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 119773 Score = 38.2 bits (19), Expect = 1.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 227 atcaaaaacatcaggatgtccatagtg 253 |||||| ||||||||||| |||||||| Sbjct: 79025 atcaaatacatcaggatgcccatagtg 78999 Score = 36.2 bits (18), Expect = 5.7 Identities = 24/26 (92%) Strand = Plus / Minus Query: 507 gtgaagattatggcatggttttggtt 532 ||||| ||||| |||||||||||||| Sbjct: 78314 gtgaaaattattgcatggttttggtt 78289 >gi|60401297|gb|DN234104.1|DN234104 MEST1189_H09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 707 Score = 36.2 bits (18), Expect = 5.7 Identities = 21/22 (95%) Strand = Plus / Minus Query: 458 caagtagttatcctgattcata 479 ||||||||||| |||||||||| Sbjct: 371 caagtagttatactgattcata 350 >gi|61119058|gb|DN560019.1|DN560019 E8-C04-T7 E7PCR Zea mays cDNA clone E7PCRE804C, mRNA sequence Length = 268 Score = 36.2 bits (18), Expect = 5.7 Identities = 21/22 (95%) Strand = Plus / Minus Query: 458 caagtagttatcctgattcata 479 ||||||||||| |||||||||| Sbjct: 178 caagtagttatactgattcata 157 >gi|38304868|gb|AY265854.1| Zea mays roothairless 1 (rth1) gene, complete cds Length = 14337 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 582 tatatttcttggtctttg 599 |||||||||||||||||| Sbjct: 10137 tatatttcttggtctttg 10154 >gi|91630502|gb|AC185115.1| Zea mays chromosome UNK clone CH201-473P16; ZMMBBc0473P16, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 188666 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 582 tatatttcttggtctttg 599 |||||||||||||||||| Sbjct: 161458 tatatttcttggtctttg 161441 >gi|91206527|gb|AC184874.1| Zea mays chromosome UNK clone CH201-147M6; ZMMBBc0147M06, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 180814 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 582 tatatttcttggtctttg 599 |||||||||||||||||| Sbjct: 10431 tatatttcttggtctttg 10414 >gi|90568151|gb|AC183939.1| Zea mays chromosome UNK clone CH201-289I6; ZMMBBc0289I06, *** SEQUENCING IN PROGRESS ***, 16 unordered pieces Length = 157525 Score = 36.2 bits (18), Expect = 5.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 512 gattatggcatggttttggttc 533 ||||||| |||||||||||||| Sbjct: 53260 gattatgacatggttttggttc 53281 Score = 36.2 bits (18), Expect = 5.7 Identities = 21/22 (95%) Strand = Plus / Minus Query: 512 gattatggcatggttttggttc 533 ||||||| |||||||||||||| Sbjct: 31321 gattatgacatggttttggttc 31300 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 179,554 Number of Sequences: 836351 Number of extensions: 179554 Number of successful extensions: 13912 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13820 Number of HSP's gapped (non-prelim): 90 length of query: 691 length of database: 669,372,029 effective HSP length: 19 effective length of query: 672 effective length of database: 653,481,360 effective search space: 439139473920 effective search space used: 439139473920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)