BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QAF30a10.yg.2.1 (1130 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|56691603|gb|CX129506.1|CX129506 QBI27g04.xg QBI Zea mays cDNA... 1213 0.0 gi|71446794|gb|DR827844.1|DR827844 ZM_BFb0071H15.r ZM_BFb Zea ma... 535 e-150 gi|74246488|gb|DT654402.1|DT654402 ZM_BFb0127P01.f ZM_BFb Zea ma... 240 3e-61 gi|32940924|gb|CF045743.1|CF045743 QCK17d08.yg QCK Zea mays cDNA... 226 5e-57 gi|32941910|gb|CF046729.1|CF046729 QCK29e06.yg QCK Zea mays cDNA... 226 5e-57 gi|90568153|gb|AC183941.1| Zea mays chromosome UNK clone CH201-9... 196 4e-48 gi|13382138|gb|BG458813.1|BG458813 947054E10.y1 947 - 2 week sho... 186 4e-45 gi|86466400|gb|DY232770.1|DY232770 ZM_BFb0242B01.f ZM_BFb Zea ma... 178 1e-42 gi|67029106|gb|CO457855.1|CO457855 MZCCL20015C10.g Maize Endospe... 66 1e-08 gi|32837254|gb|CD976932.1|CD976932 QAF23g04.yg QAF Zea mays cDNA... 62 2e-07 gi|60357324|gb|DN224297.1|DN224297 MEST1156_B09.T7-1 UGA-ZmSAM-X... 56 1e-05 gi|58082355|gb|AC155495.2| Zea mays strain B73 clone ZMMBBc0026E... 54 4e-05 gi|30698557|gb|AC144719.1| Zea mays chromosome 4S clone ZMMBBb27... 54 4e-05 gi|60342589|gb|DN209562.1|DN209562 MEST886_F10.T7-1 UGA-ZmSAM-XZ... 42 0.15 gi|21207373|gb|AY104295.1| Zea mays PCO063788 mRNA sequence 42 0.15 gi|21207373|gb|AY104295.1| Zea mays PCO063788 mRNA sequence 42 0.15 gi|19058081|gb|BM736748.1|BM736748 952048D06.y1 952 - BMS tissue... 40 0.60 gi|22490510|gb|BU050433.1|BU050433 1111028D05.y1 1111 - Unigene ... 40 0.60 gi|33468198|gb|CF245247.1|CF245247 3530_1_1_1_F08.x_5 3530 - Ful... 40 0.60 gi|6022446|gb|AW067479.1|AW067479 660013A08.y1 660 - Mixed stage... 38 2.4 gi|9732018|gb|BE510770.1|BE510770 946055D01.y1 946 - tassel prim... 38 2.4 gi|18649889|gb|BM498708.1|BM498708 952020B10.x1 952 - BMS tissue... 38 2.4 gi|33099638|gb|CF059598.1|CF059598 QCS14c04.yg QCS Zea mays cDNA... 38 2.4 gi|33100007|gb|CF059967.1|CF059967 QCS19c12.yg QCS Zea mays cDNA... 38 2.4 gi|67012192|gb|CO440941.1|CO440941 MZCCL10021A04.g Maize Endospe... 38 2.4 gi|67013631|gb|CO442380.1|CO442380 MZCCL10042G08.g Maize Endospe... 38 2.4 gi|67025774|gb|CO454523.1|CO454523 MZCCL10206B12.g Maize Endospe... 38 2.4 gi|71305312|gb|DR788789.1|DR788789 ZM_BFb0006P09.r ZM_BFb Zea ma... 38 2.4 gi|71328562|gb|DR800931.1|DR800931 ZM_BFb0024I09.r ZM_BFb Zea ma... 38 2.4 gi|71332586|gb|DR803268.1|DR803268 ZM_BFb0027N21.f ZM_BFb Zea ma... 38 2.4 gi|71430881|gb|DR811931.1|DR811931 ZM_BFb0040G06.r ZM_BFb Zea ma... 38 2.4 gi|71761484|gb|DR959421.1|DR959421 ZM_BFb0071H15.f ZM_BFb Zea ma... 38 2.4 gi|71772980|gb|DR970901.1|DR970901 ZM_BFb0093F21.r ZM_BFb Zea ma... 38 2.4 gi|76918665|gb|DV167405.1|DV167405 ZM_BFb0165H21.r ZM_BFb Zea ma... 38 2.4 gi|78121490|gb|DV539874.1|DV539874 ZM_BFb0233O24.f ZM_BFb Zea ma... 38 2.4 gi|78124357|gb|DV542741.1|DV542741 ZM_BFb0238A24.f ZM_BFb Zea ma... 38 2.4 gi|78124358|gb|DV542742.1|DV542742 ZM_BFb0238A24.r ZM_BFb Zea ma... 38 2.4 gi|89247963|gb|DY619749.1|DY619749 ZM_BFb0277O16.r ZM_BFb Zea ma... 38 2.4 gi|91052535|gb|EB162953.1|EB162953 ZM_BFb0303K14.r ZM_BFb Zea ma... 38 2.4 gi|91055953|gb|EB166371.1|EB166371 ZM_BFb0348D08.r ZM_BFb Zea ma... 38 2.4 gi|58082310|gb|AC155449.2| Zea mays strain B73 clone ZMMBBb0345F... 38 2.4 gi|22545353|gb|BU097712.1|BU097712 3524_1_45_1_B09.y_1 3524 - Ma... 36 9.4 gi|26455546|gb|CA827129.1|CA827129 1114010C05.y1 1114 - Unigene ... 36 9.4 gi|32859786|gb|CD999467.1|CD999467 QBF6d03.xg QBF Zea mays cDNA ... 36 9.4 gi|32911384|gb|CF016196.1|CF016196 QBM13d01.pg QBM Zea mays cDNA... 36 9.4 gi|32911385|gb|CF016197.1|CF016197 QBM13d01.xg QBM Zea mays cDNA... 36 9.4 gi|32930114|gb|CF034926.1|CF034926 QCG11f05.yg QCG Zea mays cDNA... 36 9.4 gi|33102417|gb|CF062377.1|CF062377 QCT8e10.yg QCT Zea mays cDNA ... 36 9.4 gi|60351406|gb|DN218379.1|DN218379 MEST1066_C02.T7-1 UGA-ZmSAM-X... 36 9.4 gi|76018352|gb|DT945522.1|DT945522 ZM_BFb0132M15.f ZM_BFb Zea ma... 36 9.4 gi|87154748|gb|DY399537.1|DY399537 IV-3524-3B-C05.T3 UGIV-3524-R... 36 9.4 gi|67043716|gb|DQ002406.1| Zea mays copia retrotransposon ji and... 36 9.4 gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-2... 36 9.4 gi|89257711|gb|AC177823.2| Zea mays chromosome UNK clone CH201-2... 36 9.4 >gi|56691603|gb|CX129506.1|CX129506 QBI27g04.xg QBI Zea mays cDNA clone QBI27g04, mRNA sequence Length = 625 Score = 1213 bits (612), Expect = 0.0 Identities = 621/625 (99%) Strand = Plus / Plus Query: 362 ggcaattaaacaactatctgaaacatctcgccaagggaagaaggaattcgtagctgaaat 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 ggcaattaaacaactatctgaaacatctcgccaagggaagaaggaattcgtggctgaaat 60 Query: 422 agaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgccttga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgccttga 120 Query: 482 gggaaataaaccacttttggtttatgagtacatggagagtggaagccttgataaagcatt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gggaaataaaccacttttggtttatgagtacatggagagtggaagccttgataaagcatt 180 Query: 542 gtttggaaatggaagattgaacttgaattggtcaacacgatataaaatatgcttggggat 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtttggaaatggaagattgaacttgaattggtcaacacgatataaaatatgcttggggat 240 Query: 602 tgcaagaggcttagcttatctccacgaagagtctagcatccgcattgtgcatagggacat 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcaagaggcttagcttatctccacgaagagtctagcatccgcattgtgcatagggacat 300 Query: 662 aaaggccagcaatgtattacttgatgccactttgaaccctaagatttcggatttcgggct 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aaaggccagcaatgtattacttgatgccactttgaaccctaagatttcggatttcgggct 360 Query: 722 cgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtacatttgg 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtacatttgg 420 Query: 782 ctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgc 841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgc 480 Query: 842 ttttggtgtggtcatgttggagattattgctggaaggccgaactatgatggtaagcttga 901 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ttttggtgtggtcatgttggagattattgctggaaggccgaactatgatggtaagcttga 540 Query: 902 ccangncatggcttatcttttagnatgggtctggcaactttacgaggaagatcatccgct 961 ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 541 ccaagacatggcttatcttttagaatgggtctggcaactttacgaggaagatcatccgct 600 Query: 962 cgacattgcggatcccaagctcaca 986 ||||||||||||||||||||||||| Sbjct: 601 cgacattgcggatcccaagctcaca 625 >gi|71446794|gb|DR827844.1|DR827844 ZM_BFb0071H15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 801 Score = 535 bits (270), Expect = e-150 Identities = 528/614 (85%) Strand = Plus / Plus Query: 251 cacttatggtgaactaaggaccgccactgaaaattttagttctgctaatcttcttggtga 310 ||||||||||||||||||||| | ||||||||||||||||| ||| ||||| ||||| Sbjct: 11 cacttatggtgaactaaggacgtctactgaaaattttagttccaataaccttctgggtga 70 Query: 311 agggggatatggatcagtttataagggtaaattagttgatggcagtgtggtggcaattaa 370 ||| |||||||| |||||||||||||||||||||| ||| || || |||||||| | || Sbjct: 71 aggaggatatgggtcagtttataagggtaaattagctgaaggaagggtggtggctgtaaa 130 Query: 371 acaactatctgaaacatctcgccaagggaagaaggaattcgtagctgaaatagaaactat 430 ||| ||||||||||||||| ||||| || | |||| | || ||||||| |||||| Sbjct: 131 acagttatctgaaacatctcatcaaggaaaacaacaatttgctgccgaaataggaactat 190 Query: 431 ttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgccttgagggaaataa 490 ||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 191 ttctcgagtgcaacaccgtaatcttgtgaagttgtacggttgctgccttgagggaaataa 250 Query: 491 accacttttggtttatgagtacatggagagtggaagccttgataaagcattgtttggaaa 550 |||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||| Sbjct: 251 accactgttggtttatgagtatctggagaatggaagccttgataaagcattatttggaag 310 Query: 551 tggaagattgaacttgaattggtcaacacgatataaaatatgcttggggattgcaagagg 610 ||| ||| ||||| | | ||| ||||||| | | | ||||| ||||| ||||||||||| Sbjct: 311 tgggagactgaacctagactggccaacacgctttgagatatgtttgggcattgcaagagg 370 Query: 611 cttagcttatctccacgaagagtctagcatccgcattgtgcatagggacataaaggccag 670 | | ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 371 catcgcttatctccatgaagagtctagcatccgtattgtgcatagggacataaaggctag 430 Query: 671 caatgtattacttgatgccactttgaaccctaagatttcggatttcgggctcgccaaact 730 |||| | || ||||| || | ||| ||||||||||| || ||||| |||||||||||||| Sbjct: 431 caatatcttgcttgacgcaaatttcaaccctaagatctcagattttgggctcgccaaact 490 Query: 731 ttatgacgataaaaagacacatgttagcacaaaagttgctggtacatttggctatctttc 790 ||||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||| | Sbjct: 491 ttatgacgacaagaagactcatgtcagcacaaaagttgcgggtacatttggttatcttgc 550 Query: 791 acctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgcttttggtgt 850 |||||||||||||||||||||||| ||||| |||||||||||| | ||||| ||||| | Sbjct: 551 acctgagtacgccatgagaggtcatatgaccgagaaagttgatgtgtttgcatttggcat 610 Query: 851 ggtcatgttggaga 864 |||||| ||||||| Sbjct: 611 ggtcatattggaga 624 Score = 38.2 bits (19), Expect = 2.4 Identities = 24/26 (92%) Strand = Plus / Plus Query: 921 ttagnatgggtctggcaactttacga 946 |||| ||||||||||||||| ||||| Sbjct: 681 ttagaatgggtctggcaactgtacga 706 >gi|74246488|gb|DT654402.1|DT654402 ZM_BFb0127P01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 782 Score = 240 bits (121), Expect = 3e-61 Identities = 149/162 (91%) Strand = Plus / Minus Query: 864 attattgctggaaggccgaactatgatggtaagcttgaccangncatggcttatctttta 923 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 696 attattgctggaaggccgaactatgatggtaagcttgaccaagacatggcttatctttta 637 Query: 924 gnatgggtctggcaactttacgaggaagatcatccgctcgacattgcggatcccaagctc 983 | ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 636 gaatgggtctggcaactttacgaggaagaccatccgctggacattgcggatcccaagctc 577 Query: 984 acagnattcgatagtnnngagttgctnngtgccatnngcatc 1025 |||| |||||||||| |||||||| ||||||| ||||| Sbjct: 576 acagaattcgatagtgtcgagttgctccgtgccatccgcatc 535 Score = 155 bits (78), Expect = 1e-35 Identities = 84/86 (97%) Strand = Plus / Minus Query: 693 ttgaaccctaagatttcggatttcgggctcgccaaactttatgacgataaaaagacacat 752 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 ttgaaccctaagattcgggatttcgggctcgccaaactttatgacgataaaaagacacat 723 Query: 753 gttagcacaaaagttgctggtacatt 778 |||||||||||||||||||||||||| Sbjct: 722 gttagcacaaaagttgctggtacatt 697 >gi|32940924|gb|CF045743.1|CF045743 QCK17d08.yg QCK Zea mays cDNA clone QCK17d08, mRNA sequence Length = 263 Score = 226 bits (114), Expect = 5e-57 Identities = 219/254 (86%) Strand = Plus / Plus Query: 516 gagagtggaagccttgataaagcattgtttggaaatggaagattgaacttgaattggtca 575 |||| |||||||||||||||||||||||||||||| || | | ||||| | | ||| || Sbjct: 6 gagaatggaagccttgataaagcattgtttggaaacgggaaactgaacctagactggcca 65 Query: 576 acacgatataaaatatgcttggggattgcaagaggcttagcttatctccacgaagagtct 635 ||||| | | | |||||||| || |||||||||||| | ||||||||||| ||||||||| Sbjct: 66 acacgttttgagatatgcttaggcattgcaagaggcctcgcttatctccatgaagagtct 125 Query: 636 agcatccgcattgtgcatagggacataaaggccagcaatgtattacttgatgccactttg 695 |||||||| |||||||||||||||||||||| |||||||| ||||||||||| | | | Sbjct: 126 agcatccgtgttgtgcatagggacataaaggctagcaatgtcttacttgatgcaaatctc 185 Query: 696 aaccctaagatttcggatttcgggctcgccaaactttatgacgataaaaagacacatgtt 755 ||||||||||| |||||||||||||| |||||||| ||||| || || ||||| ||||| Sbjct: 186 aaccctaagatctcggatttcgggcttgccaaactgtatgatgacaagaagactcatgtc 245 Query: 756 agcacaaaagttgc 769 |||||||||||||| Sbjct: 246 agcacaaaagttgc 259 >gi|32941910|gb|CF046729.1|CF046729 QCK29e06.yg QCK Zea mays cDNA clone QCK29e06, mRNA sequence Length = 284 Score = 226 bits (114), Expect = 5e-57 Identities = 219/254 (86%) Strand = Plus / Plus Query: 516 gagagtggaagccttgataaagcattgtttggaaatggaagattgaacttgaattggtca 575 |||| |||||||||||||||||||||||||||||| || | | ||||| | | ||| || Sbjct: 27 gagaatggaagccttgataaagcattgtttggaaacgggaaactgaacctagactggcca 86 Query: 576 acacgatataaaatatgcttggggattgcaagaggcttagcttatctccacgaagagtct 635 ||||| | | | |||||||| || |||||||||||| | ||||||||||| ||||||||| Sbjct: 87 acacgttttgagatatgcttaggcattgcaagaggcctcgcttatctccatgaagagtct 146 Query: 636 agcatccgcattgtgcatagggacataaaggccagcaatgtattacttgatgccactttg 695 |||||||| |||||||||||||||||||||| |||||||| ||||||||||| | | | Sbjct: 147 agcatccgtgttgtgcatagggacataaaggctagcaatgtcttacttgatgcaaatctc 206 Query: 696 aaccctaagatttcggatttcgggctcgccaaactttatgacgataaaaagacacatgtt 755 ||||||||||| |||||||||||||| |||||||| ||||| || || ||||| ||||| Sbjct: 207 aaccctaagatctcggatttcgggcttgccaaactgtatgatgacaagaagactcatgtc 266 Query: 756 agcacaaaagttgc 769 |||||||||||||| Sbjct: 267 agcacaaaagttgc 280 >gi|90568153|gb|AC183941.1| Zea mays chromosome UNK clone CH201-9B10; ZMMBBc0009B10, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 216944 Score = 196 bits (99), Expect = 4e-48 Identities = 168/191 (87%) Strand = Plus / Plus Query: 588 atatgcttggggattgcaagaggcttagcttatctccacgaagagtctagcatccgcatt 647 |||||||| || |||||||||||| | ||||||||||| ||||||||||||||||| || Sbjct: 161106 atatgcttaggcattgcaagaggcctcgcttatctccatgaagagtctagcatccgtgtt 161165 Query: 648 gtgcatagggacataaaggccagcaatgtattacttgatgccactttgaaccctaagatt 707 |||||||||||||||||||| |||||||| || |||||||| | | | ||||||||||| Sbjct: 161166 gtgcatagggacataaaggctagcaatgtcttgcttgatgcaaatctcaaccctaagatc 161225 Query: 708 tcggatttcgggctcgccaaactttatgacgataaaaagacacatgttagcacaaaagtt 767 |||||||||||||||||||||||||| || || || ||||| ||||| ||||| |||||| Sbjct: 161226 tcggatttcgggctcgccaaactttacgatgacaagaagactcatgtcagcaccaaagtt 161285 Query: 768 gctggtacatt 778 || |||||||| Sbjct: 161286 gcgggtacatt 161296 Score = 186 bits (94), Expect = 4e-45 Identities = 184/214 (85%) Strand = Plus / Plus Query: 334 agggtaaattagttgatggcagtgtggtggcaattaaacaactatctgaaacatctcgcc 393 |||||||||||| |||||| || |||||||| | ||||| ||||||||||||||| | Sbjct: 160762 agggtaaattagctgatggaagggtggtggctgtaaaacagttatctgaaacatctcatc 160821 Query: 394 aagggaagaaggaattcgtagctgaaatagaaactatttcccgagtgcagcaccgtaatc 453 | || || || |||| | ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 160822 agggaaaacagcaatttgcagccgaaatagaaactatttctcgagtgcaacaccgtaatc 160881 Query: 454 ttgtgaagttgtttggtttttgccttgagggaaataaaccacttttggtttatgagtaca 513 |||||||||||| ||||| || ||||| |||||||||||||| || |||||||||||| Sbjct: 160882 ttgtgaagttgtatggttgctgtcttgaaggaaataaaccactgttagtttatgagtacc 160941 Query: 514 tggagagtggaagccttgataaagcattgtttgg 547 | |||| ||||||||||||||||||||||||||| Sbjct: 160942 tagagaatggaagccttgataaagcattgtttgg 160975 Score = 101 bits (51), Expect = 2e-19 Identities = 75/83 (90%) Strand = Plus / Plus Query: 254 ttatggtgaactaaggaccgccactgaaaattttagttctgctaatcttcttggtgaagg 313 ||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||| Sbjct: 160337 ttatggtgagctaaggaccgctactgaaaattttagttccaataaccttcttggtgaagg 160396 Query: 314 gggatatggatcagtttataagg 336 |||||||| ||||||||||||| Sbjct: 160397 aggatatgggtcagtttataagg 160419 Score = 93.7 bits (47), Expect = 5e-17 Identities = 89/103 (86%) Strand = Plus / Plus Query: 783 tatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgct 842 |||||| |||| |||||||||||||| ||||| ||||| |||||||||||| | ||||| Sbjct: 161385 tatcttgcacccgagtacgccatgaggggtcatatgaccgagaaagttgatgtgtttgca 161444 Query: 843 tttggtgtggtcatgttggagattattgctggaaggccgaact 885 ||||| |||||||| ||||||| | | ||||||||||| |||| Sbjct: 161445 tttggagtggtcatattggagactctagctggaaggccaaact 161487 Score = 54.0 bits (27), Expect = 4e-05 Identities = 79/97 (81%) Strand = Plus / Plus Query: 95 taaaataggtgtaattattnnagtcgtgattggtgcaacagttttaggactagcaatact 154 ||||| |||||||||| || || |||||||||||| ||||||||||| || | ||| Sbjct: 160094 taaaacaggtgtaattgttggggttgtgattggtgcagcagttttaggagtactagcact 160153 Query: 155 tgctacactttgtgtgtggaggcacaaaaggagaaaa 191 |||| | | ||| |||||||||| |||||||||||| Sbjct: 160154 tgctggaatctgtatgtggaggcagaaaaggagaaaa 160190 >gi|13382138|gb|BG458813.1|BG458813 947054E10.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 420 Score = 186 bits (94), Expect = 4e-45 Identities = 184/214 (85%) Strand = Plus / Minus Query: 334 agggtaaattagttgatggcagtgtggtggcaattaaacaactatctgaaacatctcgcc 393 |||||||||||| |||||| || |||||||| | ||||| ||||||||||||||| | Sbjct: 410 agggtaaattagctgatggaagggtggtggctgtaaaacagttatctgaaacatctcatc 351 Query: 394 aagggaagaaggaattcgtagctgaaatagaaactatttcccgagtgcagcaccgtaatc 453 | || || || |||| | ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 350 agggaaaacagcaatttgcagccgaaatagaaactatttctcgagtgcaacaccgtaatc 291 Query: 454 ttgtgaagttgtttggtttttgccttgagggaaataaaccacttttggtttatgagtaca 513 |||||||||||| ||||| || ||||| |||||||||||||| || |||||||||||| Sbjct: 290 ttgtgaagttgtatggttgctgtcttgaaggaaataaaccactgttagtttatgagtacc 231 Query: 514 tggagagtggaagccttgataaagcattgtttgg 547 | |||| ||||||||||||||||||||||||||| Sbjct: 230 tagagaatggaagccttgataaagcattgtttgg 197 Score = 71.9 bits (36), Expect = 2e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 588 atatgcttggggattgcaagaggcttagcttatctccacgaagagtctagcatccg 643 |||||||| || |||||||||||| | ||||||||||| ||||||||||||||||| Sbjct: 66 atatgcttaggcattgcaagaggcctcgcttatctccatgaagagtctagcatccg 11 >gi|86466400|gb|DY232770.1|DY232770 ZM_BFb0242B01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 637 Score = 178 bits (90), Expect = 1e-42 Identities = 351/438 (80%) Strand = Plus / Minus Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgc 476 ||||| ||||| ||||||||||||||||||||||| || |||| ||||| ||| | ||| Sbjct: 536 gaaatcgaaaccatttcccgagtgcagcaccgtaacctcgtgaggttgtatggctgctgc 477 Query: 477 cttgagggaaataaaccacttttggtttatgagtacatggagagtggaagccttgataaa 536 |||||| | || | |||| | ||||| || |||||| |||||| ||||||||| ||| | Sbjct: 476 cttgagagcaaaacaccattgttggtctacgagtacctggagaatggaagcctcgatcat 417 Query: 537 gcattgtttggaaatggaagattgaacttgaattggtcaacacgatataaaatatgcttg 596 || ||||||||||| || || ||||| | | ||| ||||||||| | ||||| ||| Sbjct: 416 gctttgtttggaaaggggagcttgaatctagactggccaacacgattcgagatatgtttg 357 Query: 597 gggattgcaagaggcttagcttatctccacgaagagtctagcatccgcattgtgcatagg 656 || | |||||||| |||||||||||||||| ||||| | ||||||||||||||| ||| Sbjct: 356 ggcgtagcaagaggtatagcttatctccacgaggagtcaaccatccgcattgtgcacagg 297 Query: 657 gacataaaggccagcaatgtattacttgatgccactttgaaccctaagatttcggatttc 716 |||||||||||||| || || || | || ||| | | ||||| ||||| || |||||| Sbjct: 296 gacataaaggccagtaacgtgttgatcgacgccgatcttaacccgaagatctccgatttc 237 Query: 717 gggctcgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtaca 776 || || ||||| || || ||||| || ||||| || || | |||||| |||||||| || Sbjct: 236 ggccttgccaagctctacgacgacaagaagactcacgtcatcacaaatgttgctggcacg 177 Query: 777 tttggctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatt 836 ||||| ||||| | ||||||||||| |||||||| || ||||||||||| |||||| | Sbjct: 176 tttggttatctcgcgcctgagtacgctatgagagggcatatgactgagaaggttgatgtg 117 Query: 837 tttgcttttggtgtggtc 854 || || ||||| |||||| Sbjct: 116 ttcgcgtttggcgtggtc 99 Score = 42.1 bits (21), Expect = 0.15 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 gatatggatcagtttataagggtaa 340 |||||||||||||||| |||||||| Sbjct: 637 gatatggatcagtttacaagggtaa 613 >gi|67029106|gb|CO457855.1|CO457855 MZCCL20015C10.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 914 Score = 65.9 bits (33), Expect = 1e-08 Identities = 96/113 (84%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgc 476 ||||||||||| ||||||||||||||||||||||| || |||| ||||| ||| | ||| Sbjct: 762 gaaatagaaac-atttcccgagtgcagcaccgtaacctggtgaggttgtatggctgctgc 820 Query: 477 cttgagggaaataaaccacttttggtttatgagtacatggagagtggaagcct 529 |||||| |||| | |||| | ||||| || |||||| |||||| ||||||||| Sbjct: 821 cttgagagaaa-acacca-tgttggtctacgagtacctggagaatggaagcct 871 Score = 60.0 bits (30), Expect = 6e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 303 cttggtgaagggggatatggatcagtttataagggtaa 340 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 649 cttggtgaaggaggatatggatcagtttacaagggtaa 686 >gi|32837254|gb|CD976932.1|CD976932 QAF23g04.yg QAF Zea mays cDNA clone QAF23g04, mRNA sequence Length = 478 Score = 61.9 bits (31), Expect = 2e-07 Identities = 61/71 (85%) Strand = Plus / Minus Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgc 476 ||||| ||||| ||||||||||||||||||||||| || |||| ||||| ||| | ||| Sbjct: 94 gaaatcgaaaccatttcccgagtgcagcaccgtaacctggtgaggttgtatggctgctgc 35 Query: 477 cttgagggaaa 487 |||||| |||| Sbjct: 34 cttgagagaaa 24 Score = 60.0 bits (30), Expect = 6e-07 Identities = 36/38 (94%) Strand = Plus / Minus Query: 303 cttggtgaagggggatatggatcagtttataagggtaa 340 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 208 cttggtgaaggaggatatggatcagtttacaagggtaa 171 >gi|60357324|gb|DN224297.1|DN224297 MEST1156_B09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 683 Score = 56.0 bits (28), Expect = 1e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 301 ttcttggtgaagggggatatggatcagtttataagggtaa 340 ||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 518 ttcttggagaaggcggatatggaccagtttataagggtaa 557 >gi|58082355|gb|AC155495.2| Zea mays strain B73 clone ZMMBBc0026E06, *** SEQUENCING IN PROGRESS ***, 24 unordered pieces Length = 174192 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaa 451 ||||| ||||| ||||||||||||||||||||||| Sbjct: 70979 gaaatcgaaaccatttcccgagtgcagcaccgtaa 70945 >gi|30698557|gb|AC144719.1| Zea mays chromosome 4S clone ZMMBBb277I24, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces Length = 158045 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaa 451 ||||| ||||| ||||||||||||||||||||||| Sbjct: 23249 gaaatcgaaaccatttcccgagtgcagcaccgtaa 23283 >gi|60342589|gb|DN209562.1|DN209562 MEST886_F10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 730 Score = 42.1 bits (21), Expect = 0.15 Identities = 36/41 (87%) Strand = Plus / Minus Query: 759 acaaaagttgctggtacatttggctatctttcacctgagta 799 |||| |||||| || ||||||||||||||| |||| ||||| Sbjct: 591 acaatagttgcaggaacatttggctatcttgcaccagagta 551 >gi|21207373|gb|AY104295.1| Zea mays PCO063788 mRNA sequence Length = 1034 Score = 42.1 bits (21), Expect = 0.15 Identities = 36/41 (87%) Strand = Plus / Plus Query: 759 acaaaagttgctggtacatttggctatctttcacctgagta 799 |||| |||||| || ||||||||||||||| |||| ||||| Sbjct: 442 acaatagttgcaggaacatttggctatcttgcaccagagta 482 >gi|21207373|gb|AY104295.1| Zea mays PCO063788 mRNA sequence Length = 1034 Score = 42.1 bits (21), Expect = 0.15 Identities = 36/41 (87%) Strand = Plus / Plus Query: 759 acaaaagttgctggtacatttggctatctttcacctgagta 799 |||| |||||| || ||||||||||||||| |||| ||||| Sbjct: 442 acaatagttgcaggaacatttggctatcttgcaccagagta 482 >gi|19058081|gb|BM736748.1|BM736748 952048D06.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 529 Score = 40.1 bits (20), Expect = 0.60 Identities = 26/28 (92%) Strand = Plus / Minus Query: 694 tgaaccctaagatttcggatttcgggct 721 ||||||| ||||| |||||||||||||| Sbjct: 467 tgaacccgaagatctcggatttcgggct 440 >gi|22490510|gb|BU050433.1|BU050433 1111028D05.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 521 Score = 40.1 bits (20), Expect = 0.60 Identities = 26/28 (92%) Strand = Plus / Minus Query: 694 tgaaccctaagatttcggatttcgggct 721 ||||||| ||||| |||||||||||||| Sbjct: 415 tgaacccgaagatctcggatttcgggct 388 >gi|33468198|gb|CF245247.1|CF245247 3530_1_1_1_F08.x_5 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 758 Score = 40.1 bits (20), Expect = 0.60 Identities = 26/28 (92%) Strand = Plus / Minus Query: 694 tgaaccctaagatttcggatttcgggct 721 ||||||| ||||| |||||||||||||| Sbjct: 610 tgaacccgaagatctcggatttcgggct 583 >gi|6022446|gb|AW067479.1|AW067479 660013A08.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 596 Score = 38.2 bits (19), Expect = 2.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 439 tgcagcaccgtaatcttgtgaagttgtttggtttttgccttga 481 |||| |||||||||||||| || ||| ||||| ||||| |||| Sbjct: 316 tgcaccaccgtaatcttgtcaaattgattggtatttgcgttga 358 >gi|9732018|gb|BE510770.1|BE510770 946055D01.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 466 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 766 ttgctggtacatttggcta 784 ||||||||||||||||||| Sbjct: 28 ttgctggtacatttggcta 46 >gi|18649889|gb|BM498708.1|BM498708 952020B10.x1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 101 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 169 tgtggaggcacaaaaggagaaaa 191 |||||||||| |||||||||||| Sbjct: 34 tgtggaggcagaaaaggagaaaa 12 >gi|33099638|gb|CF059598.1|CF059598 QCS14c04.yg QCS Zea mays cDNA clone QCS14c04, mRNA sequence Length = 532 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 747 acacatgttagcacaaaagttgc 769 |||||||||||||||| |||||| Sbjct: 421 acacatgttagcacaagagttgc 443 >gi|33100007|gb|CF059967.1|CF059967 QCS19c12.yg QCS Zea mays cDNA clone QCS19c12, mRNA sequence Length = 509 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 747 acacatgttagcacaaaagttgc 769 |||||||||||||||| |||||| Sbjct: 91 acacatgttagcacaagagttgc 69 >gi|67012192|gb|CO440941.1|CO440941 MZCCL10021A04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 807 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 75 aatacaaaaaagaagggtaataa 97 ||||||||||||||||| ||||| Sbjct: 587 aatacaaaaaagaaggggaataa 565 >gi|67013631|gb|CO442380.1|CO442380 MZCCL10042G08.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 822 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 766 ttgctggtacatttggcta 784 ||||||||||||||||||| Sbjct: 145 ttgctggtacatttggcta 163 >gi|67025774|gb|CO454523.1|CO454523 MZCCL10206B12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 940 Score = 38.2 bits (19), Expect = 2.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 648 gtgcatagggacataaaggccagcaat 674 ||||| |||||||| |||||||||||| Sbjct: 397 gtgcacagggacatcaaggccagcaat 423 >gi|71305312|gb|DR788789.1|DR788789 ZM_BFb0006P09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 888 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 462 catagggacataaaggcaagcaa 484 >gi|71328562|gb|DR800931.1|DR800931 ZM_BFb0024I09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 832 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 735 catagggacataaaggcaagcaa 757 >gi|71332586|gb|DR803268.1|DR803268 ZM_BFb0027N21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 709 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 766 ttgctggtacatttggcta 784 ||||||||||||||||||| Sbjct: 583 ttgctggtacatttggcta 565 >gi|71430881|gb|DR811931.1|DR811931 ZM_BFb0040G06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 823 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 755 catagggacataaaggcaagcaa 777 >gi|71761484|gb|DR959421.1|DR959421 ZM_BFb0071H15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 830 Score = 38.2 bits (19), Expect = 2.4 Identities = 24/26 (92%) Strand = Plus / Minus Query: 921 ttagnatgggtctggcaactttacga 946 |||| ||||||||||||||| ||||| Sbjct: 757 ttagaatgggtctggcaactgtacga 732 >gi|71772980|gb|DR970901.1|DR970901 ZM_BFb0093F21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 794 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 401 gaaggaattcgtagctgaa 419 ||||||||||||||||||| Sbjct: 786 gaaggaattcgtagctgaa 768 >gi|76918665|gb|DV167405.1|DV167405 ZM_BFb0165H21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 876 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 620 catagggacataaaggcaagcaa 642 >gi|78121490|gb|DV539874.1|DV539874 ZM_BFb0233O24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 643 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 747 acacatgttagcacaaaagttgc 769 |||||||||||||||| |||||| Sbjct: 406 acacatgttagcacaagagttgc 384 >gi|78124357|gb|DV542741.1|DV542741 ZM_BFb0238A24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 757 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 766 ttgctggtacatttggcta 784 ||||||||||||||||||| Sbjct: 605 ttgctggtacatttggcta 587 >gi|78124358|gb|DV542742.1|DV542742 ZM_BFb0238A24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 791 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 766 ttgctggtacatttggcta 784 ||||||||||||||||||| Sbjct: 751 ttgctggtacatttggcta 769 >gi|89247963|gb|DY619749.1|DY619749 ZM_BFb0277O16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 753 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 462 catagggacataaaggcaagcaa 484 >gi|91052535|gb|EB162953.1|EB162953 ZM_BFb0303K14.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 719 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 521 tggaagccttgataaagca 539 ||||||||||||||||||| Sbjct: 612 tggaagccttgataaagca 630 >gi|91055953|gb|EB166371.1|EB166371 ZM_BFb0348D08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 839 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 651 catagggacataaaggccagcaa 673 ||||||||||||||||| ||||| Sbjct: 644 catagggacataaaggcaagcaa 666 >gi|58082310|gb|AC155449.2| Zea mays strain B73 clone ZMMBBb0345F21, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces Length = 132674 Score = 38.2 bits (19), Expect = 2.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 498 ttggtttatgagtacatggagagtggaagccttga 532 ||||| || ||||||||||||| ||| |||||||| Sbjct: 91460 ttggtatacgagtacatggagaatggcagccttga 91426 >gi|22545353|gb|BU097712.1|BU097712 3524_1_45_1_B09.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 473 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 499 tggtttatgagtacatgg 516 |||||||||||||||||| Sbjct: 43 tggtttatgagtacatgg 60 >gi|26455546|gb|CA827129.1|CA827129 1114010C05.y1 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 567 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 499 tggtttatgagtacatgg 516 |||||||||||||||||| Sbjct: 34 tggtttatgagtacatgg 51 >gi|32859786|gb|CD999467.1|CD999467 QBF6d03.xg QBF Zea mays cDNA clone QBF6d03, mRNA sequence Length = 600 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 498 ttggtttatgagtacatg 515 |||||||||||||||||| Sbjct: 157 ttggtttatgagtacatg 174 >gi|32911384|gb|CF016196.1|CF016196 QBM13d01.pg QBM Zea mays cDNA clone QBM13d01, mRNA sequence Length = 649 Score = 36.2 bits (18), Expect = 9.4 Identities = 24/26 (92%) Strand = Plus / Minus Query: 774 acatttggctatctttcacctgagta 799 ||||||||||||| | |||||||||| Sbjct: 626 acatttggctatcatgcacctgagta 601 >gi|32911385|gb|CF016197.1|CF016197 QBM13d01.xg QBM Zea mays cDNA clone QBM13d01, mRNA sequence Length = 682 Score = 36.2 bits (18), Expect = 9.4 Identities = 24/26 (92%) Strand = Plus / Plus Query: 774 acatttggctatctttcacctgagta 799 ||||||||||||| | |||||||||| Sbjct: 24 acatttggctatcatgcacctgagta 49 >gi|32930114|gb|CF034926.1|CF034926 QCG11f05.yg QCG Zea mays cDNA clone QCG11f05, mRNA sequence Length = 462 Score = 36.2 bits (18), Expect = 9.4 Identities = 24/26 (92%) Strand = Plus / Minus Query: 774 acatttggctatctttcacctgagta 799 ||||||||||||| | |||||||||| Sbjct: 456 acatttggctatcatgcacctgagta 431 >gi|33102417|gb|CF062377.1|CF062377 QCT8e10.yg QCT Zea mays cDNA clone QCT8e10, mRNA sequence Length = 363 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 511 acatggagagtggaagcc 528 |||||||||||||||||| Sbjct: 145 acatggagagtggaagcc 162 >gi|60351406|gb|DN218379.1|DN218379 MEST1066_C02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 698 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 ttcttggtgaagggggat 318 |||||||||||||||||| Sbjct: 641 ttcttggtgaagggggat 624 >gi|76018352|gb|DT945522.1|DT945522 ZM_BFb0132M15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 612 Score = 36.2 bits (18), Expect = 9.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 706 tttcggatttcgggctcgccaa 727 ||||||| |||||||||||||| Sbjct: 612 tttcggacttcgggctcgccaa 591 >gi|87154748|gb|DY399537.1|DY399537 IV-3524-3B-C05.T3 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 695 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 499 tggtttatgagtacatgg 516 |||||||||||||||||| Sbjct: 45 tggtttatgagtacatgg 62 >gi|67043716|gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo17_14577, complete sequence Length = 92777 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 169 tgtggaggcacaaaagga 186 |||||||||||||||||| Sbjct: 64167 tgtggaggcacaaaagga 64184 >gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-259G1; ZMMBBc0259G01, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 185847 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 282 aattttagttctgctaat 299 |||||||||||||||||| Sbjct: 11949 aattttagttctgctaat 11932 >gi|89257711|gb|AC177823.2| Zea mays chromosome UNK clone CH201-252J22; ZMMBBc0252J22, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 200539 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 498 ttggtttatgagtacatg 515 |||||||||||||||||| Sbjct: 73380 ttggtttatgagtacatg 73397 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 498 ttggtttatgagtacatg 515 |||||||||||||||||| Sbjct: 62277 ttggtttatgagtacatg 62294 Score = 36.2 bits (18), Expect = 9.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 498 ttggtttatgagtacatg 515 |||||||||||||||||| Sbjct: 46216 ttggtttatgagtacatg 46233 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 285,422 Number of Sequences: 836351 Number of extensions: 285422 Number of successful extensions: 21772 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21642 Number of HSP's gapped (non-prelim): 124 length of query: 1130 length of database: 669,372,029 effective HSP length: 19 effective length of query: 1111 effective length of database: 653,481,360 effective search space: 726017790960 effective search space used: 726017790960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)