BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QAF12e06.yg.2.1 (561 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|78075229|gb|DV503663.1|DV503663 ZM_BFb0180C22.r ZM_BFb Zea ma... 1049 0.0 gi|76281832|gb|DV021400.1|DV021400 ZM_BFb0140C08.r ZM_BFb Zea ma... 944 0.0 gi|37659535|gb|CF752097.1|CF752097 035-N24 Normalized Multiple T... 583 e-165 gi|34995113|gb|CF569030.1|CF569030 07-b05-r Normalized Multiple ... 462 e-128 gi|60349250|gb|DN216223.1|DN216223 MEST1030_E08.T7-1 UGA-ZmSAM-X... 287 7e-76 gi|58082406|gb|AC155547.2| Zea mays strain B73 clone ZMMBBc0156P... 266 3e-69 gi|34995112|gb|CF569029.1|CF569029 07-b05-f Normalized Multiple ... 74 2e-11 gi|5343265|gb|AI795570.1|AI795570 614009H05.x2 614 - root cDNA l... 44 0.019 gi|5608060|gb|AI901727.1|AI901727 618009G08.x1 618 - Inbred Tass... 44 0.019 gi|5901368|gb|AW042468.1|AW042468 614069A04.x2 614 - root cDNA l... 44 0.019 gi|6056564|gb|AW090969.1|AW090969 614069A04.y1 614 - root cDNA l... 44 0.019 gi|40303558|gb|CK347945.1|CK347945 zmrsub1_0B20-004-c03.s3 zmrsu... 44 0.019 gi|71428143|gb|DR809193.1|DR809193 ZM_BFb0036E16.f ZM_BFb Zea ma... 44 0.019 gi|76016208|gb|DT943378.1|DT943378 ZM_BFb0129E15.f ZM_BFb Zea ma... 44 0.019 gi|84976941|gb|DW475363.1|DW475363 0417 Zea mays central cell cD... 44 0.019 gi|21216482|gb|AY111892.1| Zea mays CL34424_1 mRNA sequence 44 0.019 gi|21216482|gb|AY111892.1| Zea mays CL34424_1 mRNA sequence 44 0.019 gi|6194616|gb|AW146720.1|AW146720 614078F03.y1 614 - root cDNA l... 42 0.074 gi|6194806|gb|AW146910.1|AW146910 614089G02.y1 614 - root cDNA l... 42 0.074 gi|21214816|gb|AY110407.1| Zea mays CL40803_1 mRNA sequence 42 0.074 gi|21214816|gb|AY110407.1| Zea mays CL40803_1 mRNA sequence 42 0.074 gi|76016209|gb|DT943379.1|DT943379 ZM_BFb0129E15.r ZM_BFb Zea ma... 38 1.2 gi|60356870|gb|DN223843.1|DN223843 MEST1148_G10.T7-1 UGA-ZmSAM-X... 36 4.6 >gi|78075229|gb|DV503663.1|DV503663 ZM_BFb0180C22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 795 Score = 1049 bits (529), Expect = 0.0 Identities = 541/545 (99%) Strand = Plus / Plus Query: 1 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctagcttgaata 60 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 227 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctggcttgaata 286 Query: 61 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 346 Query: 121 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 406 Query: 181 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 466 Query: 241 tgaatgtcattgaattggataaatggagggacactggcattaccagtttgcatgatcaat 300 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 467 tgaatgtcattgaattggataaatggagggacaccggcattaccagtttgcatgatcaat 526 Query: 301 cagtccagaagttgcgaaaggacagcctgaaatctcagcgactgcaagcactccctgcag 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 527 cagtccagaagttgcgaaaggacagcctgaaatcacagcgactgcaagcactccctgcag 586 Query: 361 gtctacttgcctttcaagacctggtatatcctttggaagattcatgggttgagtcaggcc 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 587 gtctacttgcctttcaagacctgatatatcctttggaagattcatgggttgagtcaggcc 646 Query: 421 ttggacatgattatggaatcagccatgtcgatatagagaaggctgctactctgcactaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 ttggacatgattatggaatcagccatgtcgatatagagaaggctgctactctgcactaca 706 Query: 481 atggtgtgatgaaaccttggcttgacttggggatacttgattacaagaactactggagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 atggtgtgatgaaaccttggcttgacttggggatacttgattacaagaactactggagga 766 Query: 541 agtac 545 ||||| Sbjct: 767 agtac 771 >gi|76281832|gb|DV021400.1|DV021400 ZM_BFb0140C08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 603 Score = 944 bits (476), Expect = 0.0 Identities = 491/496 (98%) Strand = Plus / Plus Query: 1 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctagcttgaata 60 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 108 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctggcttgaata 167 Query: 61 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 227 Query: 121 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 287 Query: 181 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 347 Query: 241 tgaatgtcattgaattggataaatggagggacactggcattaccagtttgcatgatcaat 300 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 348 tgaatgtcattgaattggataaatggagggacaccggcattaccagtttgcatgatcaat 407 Query: 301 cagtccagaagttgcgaaaggacagcctgaaatctcagcgactgcaagcactccctgcag 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 408 cagtccagaagttgcgaaaggacagcctgaaatcacagcgactgcaagcactccctgcag 467 Query: 361 gtctacttgcctttcaagacctggtatatcctttggaagattcatgggttgagtcaggcc 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 468 gtctacttgcctttcaagacctgatatatcctttggaagattcatgggttgagtcaggcc 527 Query: 421 ttggacatgattatggaatcagccatgtcgatatagagaaggctgctactctgcactaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ttggacatgattatggaatcagccatgtcgatatagagaaggctgctactctgcactaca 587 Query: 481 atggtgtgatgaaacc 496 |||| ||||||||||| Sbjct: 588 atggggtgatgaaacc 603 >gi|37659535|gb|CF752097.1|CF752097 035-N24 Normalized Multiple Tissues and Developmental Stages cDNA Library of Maize Inbred MO17 Zea mays cDNA 3', mRNA sequence Length = 576 Score = 583 bits (294), Expect = e-165 Identities = 300/302 (99%) Strand = Plus / Plus Query: 1 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctagcttgaata 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 acatatctatcttcggcctttcacatttcctcttgcctgaccttcttcctagcttgaata 332 Query: 61 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaacc 392 Query: 121 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 tcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggcagc 452 Query: 181 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcgggcc 512 Query: 241 tgaatgtcattgaattggataaatggagggacactggcattaccagtttgcatgatcaat 300 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 513 tgaatgtcattgaattgcataaatggagggacaccggcattaccagtttgcatgatcaat 572 Query: 301 ca 302 || Sbjct: 573 ca 574 >gi|34995113|gb|CF569030.1|CF569030 07-b05-r Normalized Multiple Tissues and Developmental Stages cDNA Library of Maize Inbred MO17 Zea mays cDNA 3', mRNA sequence Length = 521 Score = 462 bits (233), Expect = e-128 Identities = 247/249 (99%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 1 acatatctatcttcggcctttcacatttcctcttg-cctgaccttcttcctag-cttgaa 58 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 273 acatatctatcttcggcctttcacatttcctcttggcctgaccttcttcctaggcttgaa 332 Query: 59 tagagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaa 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tagagtagttgttctggatgatgatttgattgtccagaaggacttgtcacctctatggaa 392 Query: 119 cctcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggca 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cctcgatatgggtggtaaagtgattggagcagtccagttctgtggagtgagattagggca 452 Query: 179 gctgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcggg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gctgaaaccttatatagcagaccataacgtcgatgatgattcatgtgtgtggttgtcggg 512 Query: 239 cctgaatgt 247 ||||||||| Sbjct: 513 cctgaatgt 521 >gi|60349250|gb|DN216223.1|DN216223 MEST1030_E08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 287 bits (145), Expect = 7e-76 Identities = 148/149 (99%) Strand = Plus / Minus Query: 397 aagattcatgggttgagtcaggccttggacatgattatggaatcagccatgtcgatatag 456 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 720 aagattcatgggttgagtcaggctttggacatgattatggaatcagccatgtcgatatag 661 Query: 457 agaaggctgctactctgcactacaatggtgtgatgaaaccttggcttgacttggggatac 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 agaaggctgctactctgcactacaatggtgtgatgaaaccttggcttgacttggggatac 601 Query: 517 ttgattacaagaactactggaggaagtac 545 ||||||||||||||||||||||||||||| Sbjct: 600 ttgattacaagaactactggaggaagtac 572 >gi|58082406|gb|AC155547.2| Zea mays strain B73 clone ZMMBBc0156P09, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 162034 Score = 266 bits (134), Expect = 3e-69 Identities = 176/191 (92%), Gaps = 8/191 (4%) Strand = Plus / Plus Query: 20 ttcacatttcctcttgcctgaccttcttccta--------gcttgaatagagtagttgtt 71 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 129477 ttcacatttcctcttgcctgaccttcttcctaagttccaagcttgaatagagtagttgtt 129536 Query: 72 ctggatgatgatttgattgtccagaaggacttgtcacctctatggaacctcgatatgggt 131 |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| Sbjct: 129537 ctggatgatgatttgattgtccagaaagacttgtcatctctctggaacctcgatatgggt 129596 Query: 132 ggtaaagtgattggagcagtccagttctgtggagtgagattagggcagctgaaaccttat 191 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 129597 ggtaaagtgactggagcagtccagttctgtggagtgagattagggcagttgaaaccttat 129656 Query: 192 atagcagacca 202 |||| ||||| Sbjct: 129657 gtagcggacca 129667 Score = 206 bits (104), Expect = 2e-51 Identities = 179/203 (88%), Gaps = 7/203 (3%) Strand = Plus / Plus Query: 350 actccctgcaggtctacttgcctttcaagacctggtatatcctttggaagattcatgggt 409 |||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 129747 actccctgcaagtttacttgcctttgaagatgtggtatatcctttggaagattcatgggt 129806 Query: 410 tgagtcaggc---cttggacatgattatggaatcagccatgtcgatatagagaaggctgc 466 | |||||||| |||||||||||||| ||||| |||| |||||||||||| || ||||| Sbjct: 129807 tcagtcaggcggccttggacatgattacggaattagccgtgtcgatatagaaaaagctgc 129866 Query: 467 tactctgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgatt---- 522 | |||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 129867 tgctctgcactacaatggtgtgatgaaatcttggcttgacttggggaaacatgattataa 129926 Query: 523 acaagaactactggaggaagtac 545 | |||| |||||||||||||||| Sbjct: 129927 ataagagctactggaggaagtac 129949 Score = 50.1 bits (25), Expect = 3e-04 Identities = 25/25 (100%) Strand = Plus / Plus Query: 283 ccagtttgcatgatcaatcagtcca 307 ||||||||||||||||||||||||| Sbjct: 129709 ccagtttgcatgatcaatcagtcca 129733 >gi|34995112|gb|CF569029.1|CF569029 07-b05-f Normalized Multiple Tissues and Developmental Stages cDNA Library of Maize Inbred MO17 Zea mays cDNA 5', mRNA sequence Length = 622 Score = 73.8 bits (37), Expect = 2e-11 Identities = 37/37 (100%) Strand = Plus / Minus Query: 509 ggggatacttgattacaagaactactggaggaagtac 545 ||||||||||||||||||||||||||||||||||||| Sbjct: 607 ggggatacttgattacaagaactactggaggaagtac 571 >gi|5343265|gb|AI795570.1|AI795570 614009H05.x2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 620 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 197 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 256 Query: 532 actgga 537 |||||| Sbjct: 257 actgga 262 >gi|5608060|gb|AI901727.1|AI901727 618009G08.x1 618 - Inbred Tassel cDNA Library Zea mays cDNA, mRNA sequence Length = 502 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Minus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 311 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 252 Query: 532 actgga 537 |||||| Sbjct: 251 actgga 246 >gi|5901368|gb|AW042468.1|AW042468 614069A04.x2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 586 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Minus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 462 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 403 Query: 532 actgga 537 |||||| Sbjct: 402 actgga 397 >gi|6056564|gb|AW090969.1|AW090969 614069A04.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 597 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 208 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 267 Query: 532 actgga 537 |||||| Sbjct: 268 actgga 273 >gi|40303558|gb|CK347945.1|CK347945 zmrsub1_0B20-004-c03.s3 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 842 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Minus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 481 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 422 Query: 532 actgga 537 |||||| Sbjct: 421 actgga 416 Score = 36.2 bits (18), Expect = 4.6 Identities = 42/50 (84%) Strand = Plus / Minus Query: 222 tgtgtgtggttgtcgggcctgaatgtcattgaattggataaatggaggga 271 ||||| ||| ||||||| ||||| | ||| | ||||||||||||||||| Sbjct: 731 tgtgtatggatgtcgggggtgaatttgattaatttggataaatggaggga 682 >gi|71428143|gb|DR809193.1|DR809193 ZM_BFb0036E16.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 702 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Minus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 344 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 285 Query: 532 actgga 537 |||||| Sbjct: 284 actgga 279 Score = 36.2 bits (18), Expect = 4.6 Identities = 42/50 (84%) Strand = Plus / Minus Query: 222 tgtgtgtggttgtcgggcctgaatgtcattgaattggataaatggaggga 271 ||||| ||| ||||||| ||||| | ||| | ||||||||||||||||| Sbjct: 594 tgtgtatggatgtcgggggtgaatttgattaatttggataaatggaggga 545 >gi|76016208|gb|DT943378.1|DT943378 ZM_BFb0129E15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 733 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Minus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 392 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 333 Query: 532 actgga 537 |||||| Sbjct: 332 actgga 327 Score = 36.2 bits (18), Expect = 4.6 Identities = 42/50 (84%) Strand = Plus / Minus Query: 222 tgtgtgtggttgtcgggcctgaatgtcattgaattggataaatggaggga 271 ||||| ||| ||||||| ||||| | ||| | ||||||||||||||||| Sbjct: 642 tgtgtatggatgtcgggggtgaatttgattaatttggataaatggaggga 593 >gi|84976941|gb|DW475363.1|DW475363 0417 Zea mays central cell cDNA library Zea mays cDNA clone CC0417, mRNA sequence Length = 630 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 310 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 369 Query: 532 actgga 537 |||||| Sbjct: 370 actgga 375 >gi|21216482|gb|AY111892.1| Zea mays CL34424_1 mRNA sequence Length = 674 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 214 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 273 Query: 532 actgga 537 |||||| Sbjct: 274 actgga 279 >gi|21216482|gb|AY111892.1| Zea mays CL34424_1 mRNA sequence Length = 674 Score = 44.1 bits (22), Expect = 0.019 Identities = 55/66 (83%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || || |||| || |||||||| | Sbjct: 214 tgcactacaatggcaacatgaaaccttggcttgaattaggtataccggactacaagaagt 273 Query: 532 actgga 537 |||||| Sbjct: 274 actgga 279 >gi|6194616|gb|AW146720.1|AW146720 614078F03.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 620 Score = 42.1 bits (21), Expect = 0.074 Identities = 42/49 (85%) Strand = Plus / Plus Query: 489 atgaaaccttggcttgacttggggatacttgattacaagaactactgga 537 ||||||||||||||||| ||||| |||| ||||| | ||| ||||||| Sbjct: 221 atgaaaccttggcttgagttgggtataccagattataggaagtactgga 269 >gi|6194806|gb|AW146910.1|AW146910 614089G02.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 426 Score = 42.1 bits (21), Expect = 0.074 Identities = 42/49 (85%) Strand = Plus / Plus Query: 489 atgaaaccttggcttgacttggggatacttgattacaagaactactgga 537 ||||||||||||||||| ||||| |||| ||||| | ||| ||||||| Sbjct: 221 atgaaaccttggcttgagttgggtataccagattataggaagtactgga 269 >gi|21214816|gb|AY110407.1| Zea mays CL40803_1 mRNA sequence Length = 667 Score = 42.1 bits (21), Expect = 0.074 Identities = 42/49 (85%) Strand = Plus / Minus Query: 489 atgaaaccttggcttgacttggggatacttgattacaagaactactgga 537 ||||||||||||||||| ||||| |||| ||||| | ||| ||||||| Sbjct: 448 atgaaaccttggcttgagttgggtataccagattataggaagtactgga 400 >gi|21214816|gb|AY110407.1| Zea mays CL40803_1 mRNA sequence Length = 667 Score = 42.1 bits (21), Expect = 0.074 Identities = 42/49 (85%) Strand = Plus / Minus Query: 489 atgaaaccttggcttgacttggggatacttgattacaagaactactgga 537 ||||||||||||||||| ||||| |||| ||||| | ||| ||||||| Sbjct: 448 atgaaaccttggcttgagttgggtataccagattataggaagtactgga 400 >gi|76016209|gb|DT943379.1|DT943379 ZM_BFb0129E15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 854 Score = 38.2 bits (19), Expect = 1.2 Identities = 54/66 (81%) Strand = Plus / Plus Query: 472 tgcactacaatggtgtgatgaaaccttggcttgacttggggatacttgattacaagaact 531 ||||||||||||| ||||||||||||||||| || | |||| || |||||||| | Sbjct: 777 tgcactacaatggcaacatgaaaccttggcttgaattangtataccggactacaagaagt 836 Query: 532 actgga 537 |||||| Sbjct: 837 actgga 842 Score = 36.2 bits (18), Expect = 4.6 Identities = 42/50 (84%) Strand = Plus / Plus Query: 222 tgtgtgtggttgtcgggcctgaatgtcattgaattggataaatggaggga 271 ||||| ||| ||||||| ||||| | ||| | ||||||||||||||||| Sbjct: 527 tgtgtatggatgtcgggggtgaatttgattaatttggataaatggaggga 576 >gi|60356870|gb|DN223843.1|DN223843 MEST1148_G10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 36.2 bits (18), Expect = 4.6 Identities = 33/38 (86%) Strand = Plus / Plus Query: 70 ttctggatgatgatttgattgtccagaaggacttgtca 107 |||| ||||||||| | |||| ||||||||||||||| Sbjct: 303 ttcttgatgatgatattgttgttcagaaggacttgtca 340 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 160,078 Number of Sequences: 836351 Number of extensions: 160078 Number of successful extensions: 11168 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 11105 Number of HSP's gapped (non-prelim): 48 length of query: 561 length of database: 669,372,029 effective HSP length: 19 effective length of query: 542 effective length of database: 653,481,360 effective search space: 354186897120 effective search space used: 354186897120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)