BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 8028975.2.1 (595 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|40302764|gb|CK347151.1|CK347151 zmrsub1_0A10-003-e01.s3 zmrsu... 1067 0.0 gi|71444354|gb|DR825404.1|DR825404 ZM_BFb0067L05.f ZM_BFb Zea ma... 1057 0.0 gi|60358791|gb|DN225764.1|DN225764 MEST1179_G04.T7-1 UGA-ZmSAM-X... 1049 0.0 gi|31353805|gb|CD438162.1|CD438162 EL01N0510B01.b Endosperm_5 Ze... 1037 0.0 gi|54652623|gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA se... 1037 0.0 gi|54652623|gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA se... 1037 0.0 gi|71760646|gb|DR958583.1|DR958583 ZM_BFb0061G09.f ZM_BFb Zea ma... 1033 0.0 gi|13178031|gb|BG349289.1|BG349289 947030D07.x2 947 - 2 week sho... 1023 0.0 gi|16378064|gb|BI992262.1|BI992262 1020058G05.x3 1020 - Unigene ... 1015 0.0 gi|16378584|gb|BI992505.1|BI992505 1020063B08.x2 1020 - Unigene ... 914 0.0 gi|60355243|gb|DN222216.1|DN222216 MEST1124_F12.T7-1 UGA-ZmSAM-X... 902 0.0 gi|13249983|gb|BG360888.1|BG360888 947043D09.x2 947 - 2 week sho... 900 0.0 gi|60347501|gb|DN214474.1|DN214474 MEST852_F06.T7-1 UGA-ZmSAM-XZ... 894 0.0 gi|60401502|gb|DN234309.1|DN234309 MEST1015_F09.T7-1 UGA-ZmSAM-X... 876 0.0 gi|37388800|gb|CF631612.1|CF631612 zmrws48_0B10-011-a11.s3 zmrws... 829 0.0 gi|18176595|gb|BM351528.1|BM351528 MEST342-F07.T3 ISUM5-RN Zea m... 807 0.0 gi|37390927|gb|CF632701.1|CF632701 zmrws48_0B20-007-a11.s3 zmrws... 795 0.0 gi|13178030|gb|BG349288.1|BG349288 947030D06.x2 947 - 2 week sho... 785 0.0 gi|13178029|gb|BG349287.1|BG349287 947030D06.x1 947 - 2 week sho... 749 0.0 gi|32831290|gb|CD970968.1|CD970968 QAD24f04.sg QAD Zea mays cDNA... 708 0.0 gi|71437592|gb|DR818642.1|DR818642 ZM_BFb0053N06.r ZM_BFb Zea ma... 662 0.0 gi|71758719|gb|DR956656.1|DR956656 ZM_BFb0053N06.f ZM_BFb Zea ma... 654 0.0 gi|76282240|gb|DV021808.1|DV021808 ZM_BFb0140L14.f ZM_BFb Zea ma... 533 e-150 gi|32867845|gb|CF007527.1|CF007527 QBI3b01.pg QBI Zea mays cDNA ... 531 e-149 gi|24768845|gb|CA403974.1|CA403974 EL01N0510B01.g Endosperm_4 Ze... 521 e-146 gi|60398017|gb|DN230833.1|DN230833 MEST1211_A02.T7-1 UGA-ZmSAM-X... 434 e-120 gi|22819152|gb|BU499242.1|BU499242 946173C09.x1 946 - tassel pri... 432 e-119 gi|67013031|gb|CO441780.1|CO441780 MZCCL10036F10.g Maize Endospe... 250 2e-64 gi|13237177|gb|BG355191.1|BG355191 947040A06.y2 947 - 2 week sho... 139 5e-31 gi|24934290|gb|CA452508.1|CA452508 Rxo-3_E08 subtracted cDNA lib... 139 5e-31 gi|31406132|gb|CD484864.1|CD484864 3529_1_110_1_A04.x_1 3529 - 2... 139 5e-31 gi|32834530|gb|CD974208.1|CD974208 QAE43a10.yg QAE Zea mays cDNA... 139 5e-31 gi|33094097|gb|CF054091.1|CF054091 QCN24h01.yg QCN Zea mays cDNA... 139 5e-31 gi|60342049|gb|DN209022.1|DN209022 MEST878_A11.T7-1 UGA-ZmSAM-XZ... 139 5e-31 gi|60348066|gb|DN215039.1|DN215039 MEST906_A10.T7-1 UGA-ZmSAM-XZ... 139 5e-31 gi|60396747|gb|DN229611.1|DN229611 MEST1119_H05.T7-1 UGA-ZmSAM-X... 139 5e-31 gi|76926501|gb|DV170898.1|DV170898 ZM_BFb0170N04.f ZM_BFb Zea ma... 139 5e-31 gi|76926503|gb|DV170899.1|DV170899 ZM_BFb0170N04.r ZM_BFb Zea ma... 139 5e-31 gi|78084162|gb|DV512555.1|DV512555 ZM_BFb0193E13.r ZM_BFb Zea ma... 139 5e-31 gi|86467823|gb|DY234193.1|DY234193 ZM_BFb0244D17.f ZM_BFb Zea ma... 139 5e-31 gi|21208900|gb|AY105822.1| Zea mays PCO122996 mRNA sequence 139 5e-31 gi|21208900|gb|AY105822.1| Zea mays PCO122996 mRNA sequence 139 5e-31 gi|78084161|gb|DV512554.1|DV512554 ZM_BFb0193E13.f ZM_BFb Zea ma... 123 3e-26 gi|60358855|gb|DN225828.1|DN225828 MEST1180_G02.T7-1 UGA-ZmSAM-X... 94 2e-17 gi|60353779|gb|DN220752.1|DN220752 MEST1101_C06.T7-1 UGA-ZmSAM-X... 76 6e-12 gi|5608193|gb|AI901860.1|AI901860 618011D04.x1 618 - Inbred Tass... 72 9e-11 gi|14244847|gb|BG842785.2|BG842785 MEST40-A08.T3 ISUM4-TN Zea ma... 56 5e-06 gi|30087006|gb|CB885214.1|CB885214 3529_1_82_1_E06.x_1 3529 - 2 ... 56 5e-06 gi|37379972|gb|CF626761.1|CF626761 zmrws05_0B11-015-g10.s3 zmrws... 56 5e-06 gi|58082216|gb|AC155353.2| Zea mays strain B73 clone ZMMBBb0001I... 42 0.079 gi|91982806|gb|AC185262.1| Zea mays chromosome UNK clone CH201-3... 40 0.31 gi|67026763|gb|CO455512.1|CO455512 MZCCS15001D02.g Maize Endospe... 38 1.2 gi|89757531|gb|DY687093.1|DY687093 ZM_BFb0276I02.f ZM_BFb Zea ma... 38 1.2 gi|4174557|gb|AI374537.1|AI374537 MEST4-D4.POLYT-N.Seq ISUM2 Zea... 36 4.9 gi|16378462|gb|BI992456.1|BI992456 1020062D03.x1 1020 - Unigene ... 36 4.9 gi|32931256|gb|CF036068.1|CF036068 QCG27a06.yg QCG Zea mays cDNA... 36 4.9 gi|60341540|gb|DN208513.1|DN208513 MEST870_G05.T7-1 UGA-ZmSAM-XZ... 36 4.9 gi|60349349|gb|DN216322.1|DN216322 MEST1033_B03.T7-1 UGA-ZmSAM-X... 36 4.9 gi|60359100|gb|DN226073.1|DN226073 MEST1183_B09.T7-1 UGA-ZmSAM-X... 36 4.9 gi|60396834|gb|DN229658.1|DN229658 MEST1014_C03.T7-1 UGA-ZmSAM-X... 36 4.9 gi|60399571|gb|DN232382.1|DN232382 MEST1070_A12.T7-1 UGA-ZmSAM-X... 36 4.9 gi|67039301|gb|CO465556.1|CO465556 MZCCS20033B09.g Maize Endospe... 36 4.9 gi|71443113|gb|DR824163.1|DR824163 ZM_BFb0065N15.r ZM_BFb Zea ma... 36 4.9 gi|76280669|gb|DV020237.1|DV020237 ZM_BFb0138H20.f ZM_BFb Zea ma... 36 4.9 gi|76280670|gb|DV020238.1|DV020238 ZM_BFb0138H20.r ZM_BFb Zea ma... 36 4.9 gi|88755451|gb|DY539592.1|DY539592 ZM_BFb0342G02.r ZM_BFb Zea ma... 36 4.9 gi|90704954|gb|AC184051.1| Zea mays chromosome UNK clone ZMMBBb-... 36 4.9 gi|90568153|gb|AC183941.1| Zea mays chromosome UNK clone CH201-9... 36 4.9 gi|90186370|gb|AC183896.1| Zea mays chromosome UNK clone CH201-3... 36 4.9 gi|58082480|gb|AC155621.2| Zea mays strain B73 clone ZMMBBc0364F... 36 4.9 gi|58082290|gb|AC155428.2| Zea mays strain B73 clone ZMMBBb0234I... 36 4.9 >gi|40302764|gb|CK347151.1|CK347151 zmrsub1_0A10-003-e01.s3 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 826 Score = 1067 bits (538), Expect = 0.0 Identities = 544/546 (99%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 487 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 427 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 367 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 307 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 247 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctatagatcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 187 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 127 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 67 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttca 540 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 66 gtagtactgtcctcgcactactatttaccgtttgtgctgcatatgtgatataaaccttca 7 Query: 541 agaaac 546 |||||| Sbjct: 6 agaaac 1 >gi|71444354|gb|DR825404.1|DR825404 ZM_BFb0067L05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 698 Score = 1057 bits (533), Expect = 0.0 Identities = 560/570 (98%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 563 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 503 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 443 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 383 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 323 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 322 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtttacggagagc 263 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 262 gcacgtgcaaaacttgtatgttgtacttacggatgaagctgaacctgtgattttggcgat 203 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 202 gggtagagattggccatcgcgtctgtaactaaatttccccgttgcgatgcaatatgagct 143 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttca 540 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 142 gtagtactgtcctcgcactactatttaccgtttgtgctgcatatgtgatataaaccttca 83 Query: 541 agaaacacacacacgaagggnnngaatgag 570 |||||||| | | ||||||| ||||||| Sbjct: 82 agaaacacccccccgaagggtttgaatgag 53 >gi|60358791|gb|DN225764.1|DN225764 MEST1179_G04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 576 Score = 1049 bits (529), Expect = 0.0 Identities = 541/546 (99%) Strand = Plus / Minus Query: 25 gcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgacccagactatgc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgacccagactatgc 517 Query: 85 aagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcctttga 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcctttga 457 Query: 145 aggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcacgggagga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 aggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcacgggagga 397 Query: 205 aggggagagacgaaggcgggagagggatagggaccgcggcagggaccgatacaaggatag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 aggggagagacgaaggcgggagagggatagggaccgcggcagggaccgatacaaggatag 337 Query: 265 atataagcgtcataggcactacgactaccatgacgagctatagatcctgtattcttttga 324 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 336 atataagcgtcataggcactacgactaccatgacgagctatagatcatgtattcttttga 277 Query: 325 aatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtatgttgt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 aatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtatgttgt 217 Query: 385 actcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatcgcgtct 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 actcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatcgcgtct 157 Query: 445 gtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgcactactat 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 gtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgcactactat 97 Query: 505 ttaccgtttgtgatgcatatgtgatataaaccttcaagaaacacacacacgaagggnnng 564 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 96 ttaccgtttgtgctgcatatgtgatataaaccttcaagaaacacacacacgaagggtctg 37 Query: 565 aatgag 570 |||||| Sbjct: 36 aatgag 31 >gi|31353805|gb|CD438162.1|CD438162 EL01N0510B01.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 673 Score = 1037 bits (523), Expect = 0.0 Identities = 551/560 (98%), Gaps = 4/560 (0%) Strand = Plus / Plus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 153 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 213 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 273 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 274 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatatggaccg 333 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 393 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gctatagatcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 453 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 454 gcacgtgcaaaacttgtatgttgtactcacggatgaag----acctgtgattttggcgat 509 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 510 gggtagagattggccatcgcgtccgtaactaaatttccccgttgcgatgcaatatgagct 569 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttca 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gtagtactgtcctcgcactattatttaccgtttgtgatgcatatgtgatataaaccttca 629 Query: 541 agaaacacacacacgaaggg 560 |||||||||||||||||||| Sbjct: 630 agaaacacacacacgaaggg 649 >gi|54652623|gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA sequence Length = 673 Score = 1037 bits (523), Expect = 0.0 Identities = 551/560 (98%), Gaps = 4/560 (0%) Strand = Plus / Plus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 153 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 213 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 273 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 274 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatatggaccg 333 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 393 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gctatagatcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 453 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 454 gcacgtgcaaaacttgtatgttgtactcacggatgaag----acctgtgattttggcgat 509 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 510 gggtagagattggccatcgcgtccgtaactaaatttccccgttgcgatgcaatatgagct 569 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttca 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gtagtactgtcctcgcactattatttaccgtttgtgatgcatatgtgatataaaccttca 629 Query: 541 agaaacacacacacgaaggg 560 |||||||||||||||||||| Sbjct: 630 agaaacacacacacgaaggg 649 >gi|54652623|gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA sequence Length = 673 Score = 1037 bits (523), Expect = 0.0 Identities = 551/560 (98%), Gaps = 4/560 (0%) Strand = Plus / Plus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 153 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 213 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 273 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 274 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatatggaccg 333 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 393 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gctatagatcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 453 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 454 gcacgtgcaaaacttgtatgttgtactcacggatgaag----acctgtgattttggcgat 509 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 510 gggtagagattggccatcgcgtccgtaactaaatttccccgttgcgatgcaatatgagct 569 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttca 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gtagtactgtcctcgcactattatttaccgtttgtgatgcatatgtgatataaaccttca 629 Query: 541 agaaacacacacacgaaggg 560 |||||||||||||||||||| Sbjct: 630 agaaacacacacacgaaggg 649 >gi|71760646|gb|DR958583.1|DR958583 ZM_BFb0061G09.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 689 Score = 1033 bits (521), Expect = 0.0 Identities = 527/529 (99%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 470 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 410 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 350 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 290 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 230 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 170 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 110 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 50 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgat 529 |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 49 gtagtactgtcctcgcactactatttaccgtttgtgcggcatatgtgat 1 >gi|13178031|gb|BG349289.1|BG349289 947030D07.x2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 516 Score = 1023 bits (516), Expect = 0.0 Identities = 516/516 (100%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 457 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 397 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 337 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 277 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 217 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 157 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 97 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 37 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtg 516 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gtagtactgtcctcgcactactatttaccgtttgtg 1 >gi|16378064|gb|BI992262.1|BI992262 1020058G05.x3 1020 - Unigene II from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 573 Score = 1015 bits (512), Expect = 0.0 Identities = 515/516 (99%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 459 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 399 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 339 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 279 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 219 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 218 gctatagatcctgtattcttttgaaatctgcacgatattgaatgtctgtctacggagagc 159 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 99 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 39 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtg 516 |||||||||||||||||||||||||||||||||||| Sbjct: 38 gtagtactgtcctcgcactactatttaccgtttgtg 3 >gi|16378584|gb|BI992505.1|BI992505 1020063B08.x2 1020 - Unigene II from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 481 Score = 914 bits (461), Expect = 0.0 Identities = 477/481 (99%), Gaps = 1/481 (0%) Strand = Plus / Minus Query: 80 tatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcc 422 Query: 140 tttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcacgg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcacgg 362 Query: 200 gaggaaggggagagacgaaggcgggagagggatagggaccgcggcagggaccgatacaag 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggaaggggagagacgaaggcgggagagggatagggaccgcggcagggaccgatacaag 302 Query: 260 gatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtattct 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtattct 242 Query: 320 tttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtat 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtat 182 Query: 380 g-ttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatc 438 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gatagaactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatc 122 Query: 439 gcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgcac 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgcac 62 Query: 499 tactatttaccgtttgtgatgcatatgtgatataaaccttcaagaaacacacacacgaag 558 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tactatttaccgtttgtgctgcatatgtgatataaaccttcaagaaacacacacacgaag 2 Query: 559 g 559 | Sbjct: 1 g 1 >gi|60355243|gb|DN222216.1|DN222216 MEST1124_F12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 649 Score = 902 bits (455), Expect = 0.0 Identities = 455/455 (100%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 398 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 338 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 278 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 218 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 158 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 98 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 38 Query: 421 gggtagagattggccatcgcgtctgtaactaaatt 455 ||||||||||||||||||||||||||||||||||| Sbjct: 37 gggtagagattggccatcgcgtctgtaactaaatt 3 >gi|13249983|gb|BG360888.1|BG360888 947043D09.x2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 492 Score = 900 bits (454), Expect = 0.0 Identities = 483/489 (98%), Gaps = 4/489 (0%) Strand = Plus / Minus Query: 46 ttttgacaacattttgatttgcgatgacccagactatgcaagacatgttgtagatgaaac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttttgacaacattttgatttgcgatgacccagactatgcaagacatgttgtagatgaaac 426 Query: 106 ttttgctgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ttttgctgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaa 366 Query: 166 ggctagagaagaagaggaagcacggagggcacgggaggaaggggagagacgaaggcggga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ggctagagaagaagaggaagcacggagggcacgggaggaaggggagagacgaaggcggga 306 Query: 226 gagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcacta 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 gagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcacta 246 Query: 286 cgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggatgt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggatgt 186 Query: 346 ctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 ctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacc 126 Query: 406 tgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgttgc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgtt-- 68 Query: 466 gatgcaatatgagctgtagtactgtcctcgcactactatttaccgtttgtgatgcatatg 525 |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| Sbjct: 67 catgcaatatgagctgtag-actgtcct-gcactactatttaccgtttgtgctgcatatg 10 Query: 526 tgatataaa 534 ||||||||| Sbjct: 9 tgatataaa 1 >gi|60347501|gb|DN214474.1|DN214474 MEST852_F06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 643 Score = 894 bits (451), Expect = 0.0 Identities = 451/451 (100%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 392 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 332 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 272 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 212 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 152 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 92 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 32 Query: 421 gggtagagattggccatcgcgtctgtaacta 451 ||||||||||||||||||||||||||||||| Sbjct: 31 gggtagagattggccatcgcgtctgtaacta 1 >gi|60401502|gb|DN234309.1|DN234309 MEST1015_F09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 478 Score = 876 bits (442), Expect = 0.0 Identities = 454/459 (98%) Strand = Plus / Minus Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 tgcaaataaggaggcagaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 419 Query: 172 agaagaagaggaagcacggagggcacgggaggaaggggagagacgaaggcgggagaggga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 agaagaagaggaagcacggagggcacgggaggaaggggagagacgaaggcgggagaggga 359 Query: 232 tagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcactacgacta 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcactacgacta 299 Query: 292 ccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtct 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 ccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtct 239 Query: 352 acggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 acggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgat 179 Query: 412 tttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgca 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgca 119 Query: 472 atatgagctgtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatat 531 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118 atatgagctgtagtactgtcctcgcactactatttaccgtttgtgctgcatatgtgatat 59 Query: 532 aaaccttcaagaaacacacacacgaagggnnngaatgag 570 ||||||||||||||||||||||||||||| ||||||| Sbjct: 58 aaaccttcaagaaacacacacacgaagggtctgaatgag 20 >gi|37388800|gb|CF631612.1|CF631612 zmrws48_0B10-011-a11.s3 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 504 Score = 829 bits (418), Expect = 0.0 Identities = 436/443 (98%) Strand = Plus / Minus Query: 128 gaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagca 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 gaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagca 434 Query: 188 cggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccgcggcagg 247 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 433 cggagggcacgggaggaaggggagagaccaaggctggagagggatagggaccgcggcagg 374 Query: 248 gaccgatacaaggatagatataagcgtcataggcactacgactaccatgacgagctatag 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gaccgatacaaggatagatataagcgtcataggcactacgactaccatgacgagctatag 314 Query: 308 atcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtg 367 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 atcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtg 254 Query: 368 caaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgatgggtaga 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 caaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgatgggtaga 194 Query: 428 gattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtac 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtac 134 Query: 488 tgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttcaagaaaca 547 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133 tgtcctcgcactactatttaccgtttgtgctgcatatgtgatataaaccttcaagaaaca 74 Query: 548 cacacacgaagggnnngaatgag 570 ||||||||||||| ||||||| Sbjct: 73 cacacacgaagggtctgaatgag 51 >gi|18176595|gb|BM351528.1|BM351528 MEST342-F07.T3 ISUM5-RN Zea mays cDNA clone MEST342-F07 3', mRNA sequence Length = 475 Score = 807 bits (407), Expect = 0.0 Identities = 453/462 (98%), Gaps = 6/462 (1%) Strand = Plus / Minus Query: 35 gctggttcagtttttgacaacattttgatttgcgatgacccagactatgcaagacatgtt 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gctggttcagtttttgacaacattttgatttgcgatgacccagactatgcaagacatgtt 416 Query: 95 gtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcctttgaaggagctgaa 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gtagatgaaacttttgctgcaaataaggaggctgaaaaggaggcctttgaaggagctgaa 356 Query: 155 agaaagaggaaggctagagaagaagaggaagcacggagggcacgggaggaaggggagaga 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 agaaagaggaaggctagagaagaagaggaagcacggagggcacgggaggaaggggagaga 296 Query: 215 cgaaggcgggagagggatagggaccgcggcagggaccgatacaaggatagatataagcgt 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 cgaaggcgggagagggatagggaccgcggcagggaccgatacaaggatagatataagcgt 236 Query: 275 cataggcactacgactaccatgacgagctatagatcctgtattcttttgaaatctgcacg 334 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 235 cataggcactacgactaccatgacgagctatagatcctgtattaatatgaaatctgcacg 176 Query: 335 atattggatgtctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggat 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 atattggatgtctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggat 116 Query: 395 gaagctgaacctgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaat 454 |||||||||||||| |||| |||||||||||||| ||||||||||||||| |||| ||| Sbjct: 115 gaagctgaacctgt-attt--gcgatgggtagaga-tggccatcgcgtctg-aact-aat 62 Query: 455 ttccacgttgcgatgcaatatgagctgtagtactgtcctcgc 496 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttccacgttgcgatgcaatatgagctgtagtactgtcctcgc 20 >gi|37390927|gb|CF632701.1|CF632701 zmrws48_0B20-007-a11.s3 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 500 Score = 795 bits (401), Expect = 0.0 Identities = 432/443 (97%), Gaps = 4/443 (0%) Strand = Plus / Minus Query: 128 gaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagca 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagca 430 Query: 188 cggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccgcggcagg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 cggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccgcggcagg 370 Query: 248 gaccgatacaaggatagatataagcgtcataggcactacgactaccatgacgagctatag 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gaccgatacaaggatagatataagcgtcataggcactacgactaccatgacgagctatag 310 Query: 308 atcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtg 367 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 atcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtg 250 Query: 368 caaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgatgggtaga 427 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 249 caaaacttgtatgttgtactcacggatgaag----acctgtgattttggcgatgggtaga 194 Query: 428 gattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtac 487 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 193 gattggccatcgcgtccgtaactaaatttccccgttgcgatgcaatatgagctgtagtac 134 Query: 488 tgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaaccttcaagaaaca 547 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 tgtcctcgcactattatttaccgtttgtgatgcatatgtgatataaaccttcaagaaaca 74 Query: 548 cacacacgaagggnnngaatgag 570 ||||||||||||| ||||||| Sbjct: 73 cacacacgaagggtctgaatgag 51 >gi|13178030|gb|BG349288.1|BG349288 947030D06.x2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 396 Score = 785 bits (396), Expect = 0.0 Identities = 396/396 (100%) Strand = Plus / Minus Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 337 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggaccg 277 Query: 241 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 cggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacga 217 Query: 301 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagagc 157 Query: 361 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 gcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggcgat 97 Query: 421 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 gggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatgagct 37 Query: 481 gtagtactgtcctcgcactactatttaccgtttgtg 516 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gtagtactgtcctcgcactactatttaccgtttgtg 1 >gi|13178029|gb|BG349287.1|BG349287 947030D06.x1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 379 Score = 749 bits (378), Expect = 0.0 Identities = 378/378 (100%) Strand = Plus / Minus Query: 138 cctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 cctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagcacggagggcac 319 Query: 198 gggaggaaggggagagacgaaggcgggagagggatagggaccgcggcagggaccgataca 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gggaggaaggggagagacgaaggcgggagagggatagggaccgcggcagggaccgataca 259 Query: 258 aggatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtatt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 aggatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtatt 199 Query: 318 cttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgt 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgt 139 Query: 378 atgttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 atgttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccat 79 Query: 438 cgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgca 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgca 19 Query: 498 ctactatttaccgtttgt 515 |||||||||||||||||| Sbjct: 18 ctactatttaccgtttgt 1 >gi|32831290|gb|CD970968.1|CD970968 QAD24f04.sg QAD Zea mays cDNA clone QAD24f04, mRNA sequence Length = 397 Score = 708 bits (357), Expect = 0.0 Identities = 381/385 (98%), Gaps = 3/385 (0%) Strand = Plus / Minus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggt-tcagtttttgacaacattt 59 |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 383 gcagtatgtggg-attgaagtatggcag-tcaaagctggtntcagtttttgacaacattt 326 Query: 60 tgatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaata 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 tgatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaata 266 Query: 120 aggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 aggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaag 206 Query: 180 aggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggacc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 aggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggatagggacc 146 Query: 240 gcggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 gcggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatgacg 86 Query: 300 agctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggagag 359 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 agctatagatcatgtattcttttgaaatctgcacgatattggatgtctgtctacggagag 26 Query: 360 cgcacgtgcaaaacttgtatgttgt 384 ||||||||||||||||||||||||| Sbjct: 25 cgcacgtgcaaaacttgtatgttgt 1 >gi|71437592|gb|DR818642.1|DR818642 ZM_BFb0053N06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 392 Score = 662 bits (334), Expect = 0.0 Identities = 343/347 (98%) Strand = Plus / Plus Query: 224 gagagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gagagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcac 60 Query: 284 tacgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tacgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggat 120 Query: 344 gtctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaa 180 Query: 404 cctgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgtt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgtt 240 Query: 464 gcgatgcaatatgagctgtagtactgtcctcgcactactatttaccgtttgtgatgcata 523 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 241 gcgatgcaatatgagctgtagtactgtcctcgcactactatttaccgtttgtgctgcata 300 Query: 524 tgtgatataaaccttcaagaaacacacacacgaagggnnngaatgag 570 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 301 tgtgatataaaccttcaagaaacacacacacgaagggtctgaatgag 347 >gi|71758719|gb|DR956656.1|DR956656 ZM_BFb0053N06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 392 Score = 654 bits (330), Expect = 0.0 Identities = 342/347 (98%) Strand = Plus / Minus Query: 224 gagagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gagagggatagggaccgcggcagggaccgatacaaggatagatataagcgtcataggcac 333 Query: 284 tacgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 tacgactaccatgacgagctatagatcctgtattcttttgaaatctgcacgatattggat 273 Query: 344 gtctgtctacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaa 403 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 gtctgtttacggagagcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaa 213 Query: 404 cctgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgtt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 cctgtgattttggcgatgggtagagattggccatcgcgtctgtaactaaatttccacgtt 153 Query: 464 gcgatgcaatatgagctgtagtactgtcctcgcactactatttaccgtttgtgatgcata 523 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 152 gcgatgcaatatgagctgtagtactgtcctcgcactactatttaccgtttgtgctgcata 93 Query: 524 tgtgatataaaccttcaagaaacacacacacgaagggnnngaatgag 570 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 92 tgtgatataaaccttcaagaaacacacacacgaagggtgtgaatgag 46 >gi|76282240|gb|DV021808.1|DV021808 ZM_BFb0140L14.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 556 Score = 533 bits (269), Expect = e-150 Identities = 434/489 (88%) Strand = Plus / Minus Query: 58 tttgatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaa 117 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 556 tttgatttgcgatgaccccgactatgcaagccatgttgtagatgaaacttttgctgcaaa 497 Query: 118 taaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaaga 177 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 taaggagggtgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaaga 437 Query: 178 agaggaagcacggagggcacgggaggaaggggagagacgaaggcgggagagggataggga 237 ||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||| Sbjct: 436 agaggaagcccggagggcccgggaggaaggggggagacgaaggcgggggagggatagggc 377 Query: 238 ccgcggcagggaccgatacaaggatagatataagcgtcataggcactacgactaccatga 297 || |||| ||| ||||| ||||||||||| |||| ||||||||| || ||||| || || Sbjct: 376 ccccggccgggcccgatccaaggatagatttaagggtcataggcccttcgactcccctgc 317 Query: 298 cgagctatagatcctgtattcttttgaaatctgcacgatattggatgtctgtctacggag 357 || ||| |||||||||| || ||||||||| ||| |||| |||||||| ||| | ||| | Sbjct: 316 cgggctttagatcctgtttttttttgaaatttgcccgattttggatgtttgttttcgggg 257 Query: 358 agcgcacgtgcaaaacttgtatgttgtactcacggatgaagctgaacctgtgattttggc 417 | || || ||||||||| | | |||| ||| ||||||||| ||||||||||||||||| Sbjct: 256 ggggcccgggcaaaactttttttttgttctcccggatgaaggtgaacctgtgattttggg 197 Query: 418 gatgggtagagattggccatcgcgtctgtaactaaatttccacgttgcgatgcaatatga 477 || |||||| |||||||| |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 196 gaggggtagggattggccctcgcgtctgtaactaaatttccccgttgggatgcaatatga 137 Query: 478 gctgtagtactgtcctcgcactactatttaccgtttgtgatgcatatgtgatataaacct 537 |||||||| |||||||| | || || ||| ||||||||| ||||||| ||||||||||| Sbjct: 136 gctgtagttctgtcctcccccttcttttttccgtttgtgcggcatatgggatataaacct 77 Query: 538 tcaagaaac 546 ||||||||| Sbjct: 76 tcaagaaac 68 >gi|32867845|gb|CF007527.1|CF007527 QBI3b01.pg QBI Zea mays cDNA clone QBI3b01, mRNA sequence Length = 322 Score = 531 bits (268), Expect = e-149 Identities = 299/310 (96%), Gaps = 4/310 (1%) Strand = Plus / Minus Query: 261 atagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtattctt 320 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 322 atagatataagcgtcataggcactacgactaccatgacgagctatagatcatgtattctt 263 Query: 321 ttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtatg 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgtatg 203 Query: 381 ttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatcgc 440 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 202 ttgtactcacggatgaag----acctgtgattttggcgatgggtagagattggccatcgc 147 Query: 441 gtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgcacta 500 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 gtccgtaactaaatttccccgttgcgatgcaatatgagctgtagtactgtcctcgcacta 87 Query: 501 ctatttaccgtttgtgatgcatatgtgatataaaccttcaagaaacacacacacgaaggg 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ttatttaccgtttgtgatgcatatgtgatataaaccttcaagaaacacacacacgaaggg 27 Query: 561 nnngaatgag 570 ||||||| Sbjct: 26 tctgaatgag 17 >gi|24768845|gb|CA403974.1|CA403974 EL01N0510B01.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 311 Score = 521 bits (263), Expect = e-146 Identities = 294/304 (96%), Gaps = 4/304 (1%) Strand = Plus / Minus Query: 257 aaggatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtat 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 311 aaggatagatataagcgtcataggcactacgactaccatgacgagctatagatcatgtat 252 Query: 317 tcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 tcttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttg 192 Query: 377 tatgttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggcca 436 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 191 tatgttgtactcacggatgaagc----cctgtgattttggcgatgggtagagattggcca 136 Query: 437 tcgcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgc 496 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135 tcgcgtccgtaactaaatttccccgttgcgatgcaatatgagctgtagtactgtcctcgc 76 Query: 497 actactatttaccgtttgtgatgcatatgtgatataaaccttcaagaaacacacacacga 556 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 75 cctattatttaccgtttgtgatgcatatgtgatataacccttcaagaaacacacacacga 16 Query: 557 aggg 560 |||| Sbjct: 15 aggg 12 >gi|60398017|gb|DN230833.1|DN230833 MEST1211_A02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 304 Score = 434 bits (219), Expect = e-120 Identities = 219/219 (100%) Strand = Plus / Plus Query: 1 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 gcagtatgtggggattgaagtatggcaggtcaaagctggttcagtttttgacaacatttt 145 Query: 61 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 gatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataa 205 Query: 121 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 ggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaaga 265 Query: 181 ggaagcacggagggcacgggaggaaggggagagacgaag 219 ||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ggaagcacggagggcacgggaggaaggggagagacgaag 304 >gi|22819152|gb|BU499242.1|BU499242 946173C09.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 241 Score = 432 bits (218), Expect = e-119 Identities = 233/238 (97%) Strand = Plus / Minus Query: 259 ggatagatataagcgtcataggcactacgactaccatgacgagctatagatcctgtattc 318 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 241 ggatagatataagcgtcataggccctacgactaccctgacgagctatagatcccgtattc 182 Query: 319 ttttgaaatctgcacgatattggatgtctgtctacggagagcgcacgtgcaaaacttgta 378 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttttgaaatctgcccgatattggatgtctgtctacggagagcgcacgtgcaaaacttgta 122 Query: 379 tgttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccatc 438 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 121 tgttgtactcacggatgaagctgaacctgtgattttggcgatgggtagagattggccctc 62 Query: 439 gcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgc 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgtctgtaactaaatttccacgttgcgatgcaatatgagctgtagtactgtcctcgc 4 >gi|67013031|gb|CO441780.1|CO441780 MZCCL10036F10.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 536 Score = 250 bits (126), Expect = 2e-64 Identities = 129/130 (99%) Strand = Plus / Plus Query: 10 ggggattgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcga 69 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 ggggattgaagtatggcaggtcaaagctggtccagtttttgacaacattttgatttgcga 60 Query: 70 tgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctga 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctga 120 Query: 130 aaaggaggcc 139 |||||||||| Sbjct: 121 aaaggaggcc 130 >gi|13237177|gb|BG355191.1|BG355191 947040A06.y2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 531 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 360 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 419 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 420 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 479 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 480 gaagcttttgaagaagctgaaa 501 >gi|24934290|gb|CA452508.1|CA452508 Rxo-3_E08 subtracted cDNA library of maize inbred line B73 infected with Xanthomonas oryzae pv. oryzicola strain BLS222 Zea mays cDNA clone Rxo-3_E08, mRNA sequence Length = 706 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 480 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 421 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 420 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 361 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 360 gaagcttttgaagaagctgaaa 339 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 233 acgactaccatgatgagctata 212 >gi|31406132|gb|CD484864.1|CD484864 3529_1_110_1_A04.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 626 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 609 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 550 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 549 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 490 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 489 gaagcttttgaagaagctgaaa 468 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 362 acgactaccatgatgagctata 341 >gi|32834530|gb|CD974208.1|CD974208 QAE43a10.yg QAE Zea mays cDNA clone QAE43a10, mRNA sequence Length = 535 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 478 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 419 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 418 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 359 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 358 gaagcttttgaagaagctgaaa 337 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 231 acgactaccatgatgagctata 210 >gi|33094097|gb|CF054091.1|CF054091 QCN24h01.yg QCN Zea mays cDNA clone QCN24h01, mRNA sequence Length = 656 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 498 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 439 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 438 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 379 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 378 gaagcttttgaagaagctgaaa 357 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 251 acgactaccatgatgagctata 230 >gi|60342049|gb|DN209022.1|DN209022 MEST878_A11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 734 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 734 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 675 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 674 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 615 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 614 gaagcttttgaagaagctgaaa 593 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 487 acgactaccatgatgagctata 466 >gi|60348066|gb|DN215039.1|DN215039 MEST906_A10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 750 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 690 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 631 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 630 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 571 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 570 gaagcttttgaagaagctgaaa 549 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 443 acgactaccatgatgagctata 422 >gi|60396747|gb|DN229611.1|DN229611 MEST1119_H05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 730 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 690 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 631 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 630 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 571 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 570 gaagcttttgaagaagctgaaa 549 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 443 acgactaccatgatgagctata 422 >gi|76926501|gb|DV170898.1|DV170898 ZM_BFb0170N04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 690 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 685 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 626 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 625 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 566 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 565 gaagcttttgaagaagctgaaa 544 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 438 acgactaccatgatgagctata 417 >gi|76926503|gb|DV170899.1|DV170899 ZM_BFb0170N04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 690 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 6 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 65 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 66 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 125 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 126 gaagcttttgaagaagctgaaa 147 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 253 acgactaccatgatgagctata 274 >gi|78084162|gb|DV512555.1|DV512555 ZM_BFb0193E13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 690 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 6 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 65 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 66 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 125 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 126 gaagcttttgaagaagctgaaa 147 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 253 acgactaccatgatgagctata 274 >gi|86467823|gb|DY234193.1|DY234193 ZM_BFb0244D17.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 737 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Minus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 694 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 635 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 634 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 575 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 574 gaagcttttgaagaagctgaaa 553 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 447 acgactaccatgatgagctata 426 >gi|21208900|gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 1043 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 1102 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 1103 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 1162 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 1163 gaagcttttgaagaagctgaaa 1184 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 1290 acgactaccatgatgagctata 1311 >gi|21208900|gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 139 bits (70), Expect = 5e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 1043 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 1102 Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133 || || ||||||||| | ||||| || ||||||| | |||||||| ||||||||||||| Sbjct: 1103 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 1162 Query: 134 gaggcctttgaaggagctgaaa 155 || || ||||||| |||||||| Sbjct: 1163 gaagcttttgaagaagctgaaa 1184 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 1290 acgactaccatgatgagctata 1311 >gi|78084161|gb|DV512554.1|DV512554 ZM_BFb0193E13.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 690 Score = 123 bits (62), Expect = 3e-26 Identities = 119/138 (86%) Strand = Plus / Minus Query: 18 aagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgacccag 77 |||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||||| | Sbjct: 681 aagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctg 622 Query: 78 actatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaaggagg 137 | ||||||||| | ||||| || ||||||| | |||||||| |||||| |||||||| | Sbjct: 621 agtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggcggaaaaggaag 562 Query: 138 cctttgaaggagctgaaa 155 | ||||||| |||||||| Sbjct: 561 cttttgaagaagctgaaa 544 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 438 acgactaccatgatgagctata 417 >gi|60358855|gb|DN225828.1|DN225828 MEST1180_G02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 701 Score = 93.7 bits (47), Expect = 2e-17 Identities = 68/75 (90%) Strand = Plus / Plus Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73 |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 615 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 674 Query: 74 ccagactatgcaaga 88 || || ||||||||| Sbjct: 675 cctgagtatgcaaga 689 >gi|60353779|gb|DN220752.1|DN220752 MEST1101_C06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 660 Score = 75.8 bits (38), Expect = 6e-12 Identities = 80/94 (85%) Strand = Plus / Minus Query: 62 atttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataag 121 ||||| |||||||| || ||||||||| | ||||| || ||||||| | |||||||| | Sbjct: 660 atttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagg 601 Query: 122 gaggctgaaaaggaggcctttgaaggagctgaaa 155 |||||||||||||| || ||||||| |||||||| Sbjct: 600 gaggctgaaaaggaagcttttgaagaagctgaaa 567 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 461 acgactaccatgatgagctata 440 >gi|5608193|gb|AI901860.1|AI901860 618011D04.x1 618 - Inbred Tassel cDNA Library Zea mays cDNA, mRNA sequence Length = 461 Score = 71.9 bits (36), Expect = 9e-11 Identities = 75/88 (85%) Strand = Plus / Minus Query: 68 gatgacccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggct 127 |||||||| || ||||||||| | ||||| || ||||||| | |||||||| ||||||| Sbjct: 456 gatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggct 397 Query: 128 gaaaaggaggcctttgaaggagctgaaa 155 |||||||| || ||||||| |||||||| Sbjct: 396 gaaaaggaagcttttgaagaagctgaaa 369 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 263 acgactaccatgatgagctata 242 >gi|14244847|gb|BG842785.2|BG842785 MEST40-A08.T3 ISUM4-TN Zea mays cDNA clone MEST40-A08 3', mRNA sequence Length = 618 Score = 56.0 bits (28), Expect = 5e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaa 155 |||||||| ||||||||||||||| || ||||||| |||||||| Sbjct: 611 tgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaa 568 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 462 acgactaccatgatgagctata 441 >gi|30087006|gb|CB885214.1|CB885214 3529_1_82_1_E06.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 481 Score = 56.0 bits (28), Expect = 5e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaa 155 |||||||| ||||||||||||||| || ||||||| |||||||| Sbjct: 469 tgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaa 426 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 320 acgactaccatgatgagctata 299 >gi|37379972|gb|CF626761.1|CF626761 zmrws05_0B11-015-g10.s3 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 654 Score = 56.0 bits (28), Expect = 5e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaa 155 |||||||| ||||||||||||||| || ||||||| |||||||| Sbjct: 612 tgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaa 569 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 463 acgactaccatgatgagctata 442 >gi|58082216|gb|AC155353.2| Zea mays strain B73 clone ZMMBBb0001I24, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 118350 Score = 42.1 bits (21), Expect = 0.079 Identities = 30/33 (90%) Strand = Plus / Minus Query: 123 aggctgaaaaggaggcctttgaaggagctgaaa 155 ||||||||||||| || ||||||| |||||||| Sbjct: 43660 aggctgaaaaggaagcttttgaagaagctgaaa 43628 >gi|91982806|gb|AC185262.1| Zea mays chromosome UNK clone CH201-383B17; ZMMBBc0383B17, *** SEQUENCING IN PROGRESS ***, 25 unordered pieces Length = 166194 Score = 40.1 bits (20), Expect = 0.31 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gggaggaaggggagagacga 217 |||||||||||||||||||| Sbjct: 74278 gggaggaaggggagagacga 74259 Score = 40.1 bits (20), Expect = 0.31 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggaggaaggggagagacga 217 |||||||||||||||||||| Sbjct: 44171 gggaggaaggggagagacga 44190 >gi|67026763|gb|CO455512.1|CO455512 MZCCS15001D02.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 717 Score = 38.2 bits (19), Expect = 1.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 196 acgggaggaaggggagaga 214 ||||||||||||||||||| Sbjct: 30 acgggaggaaggggagaga 12 >gi|89757531|gb|DY687093.1|DY687093 ZM_BFb0276I02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 410 Score = 38.2 bits (19), Expect = 1.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 tttgacaacattttgattt 65 ||||||||||||||||||| Sbjct: 40 tttgacaacattttgattt 22 >gi|4174557|gb|AI374537.1|AI374537 MEST4-D4.POLYT-N.Seq ISUM2 Zea mays cDNA clone MEST4-D4 5', mRNA sequence Length = 839 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 438 aggaggcctttgaaggag 421 >gi|16378462|gb|BI992456.1|BI992456 1020062D03.x1 1020 - Unigene II from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 553 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 437 acgactaccatgatgagctata 416 >gi|32931256|gb|CF036068.1|CF036068 QCG27a06.yg QCG Zea mays cDNA clone QCG27a06, mRNA sequence Length = 287 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 285 acgactaccatgacgagctata 306 ||||||||||||| |||||||| Sbjct: 231 acgactaccatgatgagctata 210 >gi|60341540|gb|DN208513.1|DN208513 MEST870_G05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 645 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 470 aggaggcctttgaaggag 487 >gi|60349349|gb|DN216322.1|DN216322 MEST1033_B03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 653 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 45 tttttgacaacattttga 62 |||||||||||||||||| Sbjct: 283 tttttgacaacattttga 266 >gi|60359100|gb|DN226073.1|DN226073 MEST1183_B09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 751 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 467 aggaggcctttgaaggag 450 >gi|60396834|gb|DN229658.1|DN229658 MEST1014_C03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 604 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 193 aggaggcctttgaaggag 210 >gi|60399571|gb|DN232382.1|DN232382 MEST1070_A12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 683 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 467 aggaggcctttgaaggag 450 >gi|67039301|gb|CO465556.1|CO465556 MZCCS20033B09.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 829 Score = 36.2 bits (18), Expect = 4.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 188 cggagggcacgggaggaaggggagag 213 ||||| || ||||||||||||||||| Sbjct: 172 cggagcgcgcgggaggaaggggagag 147 >gi|71443113|gb|DR824163.1|DR824163 ZM_BFb0065N15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 689 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 196 acgggaggaaggggagag 213 |||||||||||||||||| Sbjct: 18 acgggaggaaggggagag 1 >gi|76280669|gb|DV020237.1|DV020237 ZM_BFb0138H20.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 701 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 429 aggaggcctttgaaggag 412 >gi|76280670|gb|DV020238.1|DV020238 ZM_BFb0138H20.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 842 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 523 aggaggcctttgaaggag 540 >gi|88755451|gb|DY539592.1|DY539592 ZM_BFb0342G02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 498 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 132 aggaggcctttgaaggag 149 |||||||||||||||||| Sbjct: 287 aggaggcctttgaaggag 304 >gi|90704954|gb|AC184051.1| Zea mays chromosome UNK clone ZMMBBb-166N8; ZMMBBb0166N08, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces Length = 149313 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 535 ccttcaagaaacacacac 552 |||||||||||||||||| Sbjct: 67028 ccttcaagaaacacacac 67011 >gi|90568153|gb|AC183941.1| Zea mays chromosome UNK clone CH201-9B10; ZMMBBc0009B10, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 216944 Score = 36.2 bits (18), Expect = 4.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 188 cggagggcacgggaggaaggggagag 213 ||||| || ||||||||||||||||| Sbjct: 211273 cggagcgcgcgggaggaaggggagag 211248 >gi|90186370|gb|AC183896.1| Zea mays chromosome UNK clone CH201-313H20; ZMMBBc0313H20, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 157032 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 292 ccatgacgagctatagat 309 |||||||||||||||||| Sbjct: 57269 ccatgacgagctatagat 57286 >gi|58082480|gb|AC155621.2| Zea mays strain B73 clone ZMMBBc0364F23, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces Length = 202998 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 510 gtttgtgatgcatatgtg 527 |||||||||||||||||| Sbjct: 113931 gtttgtgatgcatatgtg 113914 >gi|58082290|gb|AC155428.2| Zea mays strain B73 clone ZMMBBb0234I10, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 149271 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 510 gtttgtgatgcatatgtg 527 |||||||||||||||||| Sbjct: 128809 gtttgtgatgcatatgtg 128826 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 217,307 Number of Sequences: 836351 Number of extensions: 217307 Number of successful extensions: 24375 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24209 Number of HSP's gapped (non-prelim): 153 length of query: 595 length of database: 669,372,029 effective HSP length: 19 effective length of query: 576 effective length of database: 653,481,360 effective search space: 376405263360 effective search space used: 376405263360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)