BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 5704580.2.1 (721 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|60398228|gb|DN231044.1|DN231044 MEST1060_A04.T7-1 UGA-ZmSAM-X... 1302 0.0 gi|67019171|gb|CO447920.1|CO447920 MZCCL10117B09.g Maize Endospe... 1277 0.0 gi|44901257|gb|CK827802.1|CK827802 zmrws05_0B10-005-c04.s1 zmrws... 1247 0.0 gi|37375400|gb|CF624134.1|CF624134 zmrws05_0A10-016-c03.s1 zmrws... 1179 0.0 gi|67012338|gb|CO441087.1|CO441087 MZCCL10027A06.g Maize Endospe... 1100 0.0 gi|9733553|gb|BE512185.1|BE512185 946067G09.y1 946 - tassel prim... 1043 0.0 gi|56691655|gb|CX129558.1|CX129558 QCH31c03.yg QCH Zea mays cDNA... 963 0.0 gi|67016798|gb|CO445547.1|CO445547 MZCCL10086A02.g Maize Endospe... 954 0.0 gi|21217026|gb|AY112436.1| Zea mays CL20409_1 mRNA sequence 759 0.0 gi|21217026|gb|AY112436.1| Zea mays CL20409_1 mRNA sequence 759 0.0 gi|24934258|gb|CA452476.1|CA452476 Rxo-2_H09 subtracted cDNA lib... 620 e-176 gi|45679888|gb|BV140365.1| PZA00545 Zea mays ssp. parviglumis Be... 385 e-105 gi|45679889|gb|BV140366.1| PZA00545 Zea mays ssp. parviglumis Wi... 369 e-100 gi|45679886|gb|BV140363.1| PZA00545 Zea mays ssp. parviglumis JS... 369 e-100 gi|45679885|gb|BV140362.1| PZA00545 Zea mays ssp. parviglumis US... 369 e-100 gi|45679883|gb|BV140360.1| PZA00545 Zea mays ssp. parviglumis JS... 369 e-100 gi|45679882|gb|BV140359.1| PZA00545 Zea mays ssp. parviglumis JS... 369 e-100 gi|45679881|gb|BV140358.1| PZA00545 Zea mays ssp. parviglumis JS... 369 e-100 gi|45679880|gb|BV140357.1| PZA00545 Zea mays ssp. parviglumis JS... 369 e-100 gi|45679878|gb|BV140355.1| PZA00545 Zea mays ssp. mays CML322 Ze... 369 e-100 gi|45679877|gb|BV140354.1| PZA00545 Zea mays ssp. mays Kul11 Zea... 369 e-100 gi|45679876|gb|BV140353.1| PZA00545 Zea mays ssp. mays Kul3 Zea ... 369 e-100 gi|45679875|gb|BV140352.1| PZA00545 Zea mays ssp. mays NC350 Zea... 369 e-100 gi|45679887|gb|BV140364.1| PZA00545 Zea mays ssp. parviglumis Ka... 361 8e-98 gi|45679879|gb|BV140356.1| PZA00545 Zea mays ssp. mays CML69 Zea... 357 1e-96 gi|45679872|gb|BV140349.1| PZA00545 Zea mays ssp. mays Mo17(2) Z... 357 1e-96 gi|45679870|gb|BV140347.1| PZA00545 Zea mays ssp. mays B73(1) Ze... 357 1e-96 gi|45679871|gb|BV140348.1| PZA00545 Zea mays ssp. mays B73(2) Ze... 343 2e-92 gi|45679873|gb|BV140350.1| PZA00545 Zea mays ssp. mays Ky21 Zea ... 339 3e-91 gi|45679874|gb|BV140351.1| PZA00545 Zea mays ssp. mays Hp301 Zea... 333 2e-89 gi|45679884|gb|BV140361.1| PZA00545 Zea mays ssp. parviglumis CI... 313 2e-83 gi|9732457|gb|BE511209.1|BE511209 946058F08.x1 946 - tassel prim... 264 1e-68 gi|9731114|gb|BE509866.1|BE509866 946067G09.x1 946 - tassel prim... 232 5e-59 gi|33091103|gb|CF051097.1|CF051097 QCM20f07.yg QCM Zea mays cDNA... 139 6e-31 gi|6538913|gb|AW225052.1|AW225052 687023D09.x2 687 - Early embry... 38 1.5 gi|12972721|gb|BG268123.1|BG268123 1000165H12.x1 1000 - Unigene ... 38 1.5 gi|24767530|gb|CA402672.1|CA402672 EL01N0440G07.g Endosperm_4 Ze... 38 1.5 gi|32867572|gb|CF007254.1|CF007254 QBI26h12.pg QBI Zea mays cDNA... 38 1.5 gi|76918053|gb|DV167149.1|DV167149 ZM_BFb0165B11.f ZM_BFb Zea ma... 38 1.5 gi|85540309|gb|BT024058.1| Zea mays clone EL01N0440G07 mRNA sequ... 38 1.5 gi|85540309|gb|BT024058.1| Zea mays clone EL01N0440G07 mRNA sequ... 38 1.5 gi|6012662|gb|AW062099.1|AW062099 660009H04.y1 660 - Mixed stage... 36 5.9 gi|18450685|gb|BM428963.1|BM428963 952026D04.y1 952 - BMS tissue... 36 5.9 gi|19272472|gb|BM888728.1|BM888728 952068D07.y1 952 - BMS tissue... 36 5.9 gi|19351633|gb|BM896165.1|BM896165 952067D07.x1 952 - BMS tissue... 36 5.9 gi|22489780|gb|BU049703.1|BU049703 1111013B04.y1 1111 - Unigene ... 36 5.9 gi|22489865|gb|BU049788.1|BU049788 1111014F06.y1 1111 - Unigene ... 36 5.9 gi|22491208|gb|BU051131.1|BU051131 1111039A05.y2 1111 - Unigene ... 36 5.9 gi|67037440|gb|CO464256.1|CO464256 MZCCL15043C11.g Maize Endospe... 36 5.9 gi|76013902|gb|DT941072.1|DT941072 ZM_BFb0124E04.r ZM_BFb Zea ma... 36 5.9 gi|89106376|gb|DY576593.1|DY576593 III-952-4B-F06.M13-R UGIII-Re... 36 5.9 gi|14028756|gb|AF360356.1|AF360356 Zea mays male fertility prote... 36 5.9 gi|91064998|gb|AC184774.1| Zea mays chromosome UNK clone CH201-2... 36 5.9 gi|89365856|gb|AC183590.1| Zea mays chromosome UNK clone CH201-1... 36 5.9 gi|58082404|gb|AC155545.2| Zea mays strain B73 clone ZMMBBc0154D... 36 5.9 >gi|60398228|gb|DN231044.1|DN231044 MEST1060_A04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 780 Score = 1302 bits (657), Expect = 0.0 Identities = 684/693 (98%) Strand = Plus / Plus Query: 1 attgcaaatagcaaccgttttattgaataaattacatattcttacaccaaaatcctctgt 60 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13 attgcaaatagaaaccattttattgaataaattacatattcttacaccaaaatcctctgt 72 Query: 61 agctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 agctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtcta 132 Query: 121 aacgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 aacgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaa 192 Query: 181 acgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgc 240 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 193 acgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacacttactgc 252 Query: 241 ccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaa 312 Query: 301 ccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 ccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgt 372 Query: 361 acaacctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaa 420 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | | Sbjct: 373 acaacctccttcgcttccttttttggaatgccttcccgcattgccacaagcttctcgaca 432 Query: 421 acctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagcta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 acctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagcta 492 Query: 481 tccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 tccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttca 552 Query: 541 acttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 acttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctc 612 Query: 601 atcctctctatcgtttcttcttttatgtagtttttctgagaaaggagatggtcaacatag 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 atcctctctatcgtttcttcttttatgtagtttttctgagaaaggagatggtcaacatag 672 Query: 661 accacaattgtttcctctatgcaagcctccaca 693 ||||||||||||||||||||||||||||||||| Sbjct: 673 accacaattgtttcctctatgcaagcctccaca 705 >gi|67019171|gb|CO447920.1|CO447920 MZCCL10117B09.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 763 Score = 1277 bits (644), Expect = 0.0 Identities = 681/692 (98%), Gaps = 1/692 (0%) Strand = Plus / Minus Query: 2 ttgcaaatagcaaccgttttattgaataaattacatattcttacaccaaaatcctctgta 61 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 743 ttgcaaatagcaaccattttattgaataaattacatattcttacaccaagatcctctgta 684 Query: 62 gctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 gctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaa 624 Query: 122 acgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 acgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaa 564 Query: 182 cgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcc 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 563 cgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacacttactgtc 504 Query: 242 caagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 caagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaac 444 Query: 302 cggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgta 384 Query: 362 caacctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct: 383 caacctccttggcttccttttttggaatgccttcccgcattgccacaagcttctcgacaa 324 Query: 422 cctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctat 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 cctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctat 264 Query: 482 ccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaa 204 Query: 542 cttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctca 601 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 203 cttttgtcacgttgatgtgttccctgaagaaatccataagcacctcctcatctaacctca 144 Query: 602 tcctctctatcgtttcttcttttatgtagtttttctgagaaaggagatggtcaacataga 661 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 143 tcctctctatcgtttcttcttttatgtagtttttctgagaaagaagatggtcaacataga 84 Query: 662 ccacaattgtttcctctatgcaagcctccaca 693 |||||| ||||||||||||||||||||||||| Sbjct: 83 ccacaa-tgtttcctctatgcaagcctccaca 53 >gi|44901257|gb|CK827802.1|CK827802 zmrws05_0B10-005-c04.s1 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 662 Score = 1247 bits (629), Expect = 0.0 Identities = 641/645 (99%) Strand = Plus / Plus Query: 20 ttattgaataaattacatattcttacaccaaaatcctctgtagctaagcaaagtggaata 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 ttattgaataaattacatattcttacaccaaaatcctctgtagctaagcaaagtggaata 77 Query: 80 tacatttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaacagta 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 tacatttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaacagta 137 Query: 140 gcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgtacagtctttgcctag 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 gcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgtacagtctttgcctag 197 Query: 200 gtggtacgtttgtccactctgctcaagtccacacttactgcccaagcttcctccatatgc 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gtggtacgtttgtccactctgctcaagtccacacttactgcccaagcttcctccatatgc 257 Query: 260 ctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 ctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgc 317 Query: 320 catccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggcttcct 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 catccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggcttcct 377 Query: 380 tttttggaatgccttcccgcattgccacaagcttataaaaaacctcaggcgggcaatcag 439 |||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct: 378 tttttggaatgccttcccgcattgccacaagcttctcgacaacctcaggcgggcaatcag 437 Query: 440 gttgatgttccagtatattagtgtaaatgagagtaaagctatccaaactctcagctgaag 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gttgatgttccagtatattagtgtaaatgagagtaaagctatccaaactctcagctgaag 497 Query: 500 ctagctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttgatgt 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctagctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttgatgt 557 Query: 560 gttccctgaagaaatccataagcacctcttcatctaacctcatcctctctatcgtttctt 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 gttccctgaagaaatccataagcacctcttcatctaacctcatcctctctatcgtttctt 617 Query: 620 cttttatgtagtttttctgagaaaggagatggtcaacatagacca 664 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 cttttatgtagtttttctgagaaaggagatggtcaacatagacca 662 >gi|37375400|gb|CF624134.1|CF624134 zmrws05_0A10-016-c03.s1 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 626 Score = 1179 bits (595), Expect = 0.0 Identities = 619/626 (98%), Gaps = 2/626 (0%) Strand = Plus / Plus Query: 4 gcaaatagcaaccgttt--tattgaataaattacatattcttacaccaaaatcctctgta 61 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcaaatagcaaccatttattattgaataaattacatattcttacaccaaaatcctctgta 60 Query: 62 gctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gctaagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaa 120 Query: 122 acgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 acgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaa 180 Query: 182 cgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcc 240 Query: 242 caagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 caagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaac 300 Query: 302 cggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgta 360 Query: 362 caacctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct: 361 caacctccttggcttccttttttggaatgccttcccgcattgccacaagcttctcgacaa 420 Query: 422 cctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctat 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctat 480 Query: 482 ccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaa 540 Query: 542 cttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctca 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 cttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctca 600 Query: 602 tcctctctatcgtttcttcttttatg 627 |||||||||||||||||||||||||| Sbjct: 601 tcctctctatcgtttcttcttttatg 626 >gi|67012338|gb|CO441087.1|CO441087 MZCCL10027A06.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 602 Score = 1100 bits (555), Expect = 0.0 Identities = 582/591 (98%) Strand = Plus / Minus Query: 4 gcaaatagcaaccgttttattgaataaattacatattcttacaccaaaatcctctgtagc 63 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 591 gcaaatagcaaccattttattgaataaattacatattcttacaccaagatcctctgtagc 532 Query: 64 taagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaaac 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 taagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaaac 472 Query: 124 gtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacg 412 Query: 184 tacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgccca 243 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 411 tacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacacttactgtcca 352 Query: 244 agcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 agcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccg 292 Query: 304 gacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtaca 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 gacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtaca 232 Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaaacc 423 |||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct: 231 acctccttggcttccttttttggaatgccttcccgcattgccacaagcttctcgacaacc 172 Query: 424 tcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatcc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 tcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatcc 112 Query: 484 aaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaact 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 aaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaact 52 Query: 544 tttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatct 594 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 51 tttgtcacgttgatgtgttccctgaagaaatccataagcacctcctcatct 1 >gi|9733553|gb|BE512185.1|BE512185 946067G09.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 526 Score = 1043 bits (526), Expect = 0.0 Identities = 526/526 (100%) Strand = Plus / Minus Query: 65 aagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaaacg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 aagcaaagtggaatatacatttttgctcctcaagctgagtacacactgatagtctaaacg 467 Query: 125 tgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgt 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgt 407 Query: 185 acagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcccaa 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 acagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcccaa 347 Query: 245 gcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccgg 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 gcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccgg 287 Query: 305 acttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 acttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaa 227 Query: 365 cctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaaacct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 cctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaaacct 167 Query: 425 caggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatcca 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 caggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatcca 107 Query: 485 aactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaactt 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 aactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttcaactt 47 Query: 545 ttgtcacgttgatgtgttccctgaagaaatccataagcacctcttc 590 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ttgtcacgttgatgtgttccctgaagaaatccataagcacctcttc 1 >gi|56691655|gb|CX129558.1|CX129558 QCH31c03.yg QCH Zea mays cDNA clone QCH31c03, mRNA sequence Length = 538 Score = 963 bits (486), Expect = 0.0 Identities = 501/506 (99%) Strand = Plus / Plus Query: 202 ggtacgtttgtccactctgctcaagtccacacttactgcccaagcttcctccatatgcct 261 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtacttttgtccactctgctcaagtccacacttactgcccaagcttcctccatatgcct 80 Query: 262 ttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgcca 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgcca 140 Query: 322 tccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggcttccttt 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggcttccttt 200 Query: 382 tttggaatgccttcccgcattgccacaagcttataaaaaacctcaggcgggcaatcaggt 441 |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 201 tttggaatgccttcccgcattgccacaagcttctcgacaacctcaggcgggcaatcaggt 260 Query: 442 tgatgttccagtatattagtgtaaatgagagtaaagctatccaaactctcagctgaagct 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 tgatgttccagtatattagtgtaaatgagagtaaagctatccaaactctcagctgaagct 320 Query: 502 agctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttgatgtgt 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttgatgtgt 380 Query: 562 tccctgaagaaatccataagcacctcttcatctaacctcatcctctctatcgtttcttct 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 tccctgaagaaatccataagcacctcttcatctaacctcatcctctctatcgtttcttct 440 Query: 622 tttatgtagtttttctgagaaaggagatggtcaacatagaccacaattgtttcctctatg 681 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 tttatgtagtttttctgagaaaggagatggtcaacatagaccacaattgtttcctctatg 500 Query: 682 caagcctccacacccgcgtacctcgg 707 |||||||||||||||||||||||||| Sbjct: 501 caagcctccacacccgcgtacctcgg 526 >gi|67016798|gb|CO445547.1|CO445547 MZCCL10086A02.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 806 Score = 954 bits (481), Expect = 0.0 Identities = 540/557 (96%), Gaps = 2/557 (0%) Strand = Plus / Minus Query: 137 gtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgtacagtctttgcc 196 ||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||| || Sbjct: 805 gtagcatcggcaaaaggacaaaaaaatgttcatagagaagtgaaacgtacagtctt-gct 747 Query: 197 taggtggtacgtttgtccactctgctcaagtccacacttactgcccaagcttcctccata 256 ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 746 aaggtggtgcgtt-gtccactctgctcaagtccacacttactgtccaagcttcctccata 688 Query: 257 tgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggt 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 tgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggt 628 Query: 317 tgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggctt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 tgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacctccttggctt 568 Query: 377 ccttttttggaatgccttcccgcattgccacaagcttataaaaaacctcaggcgggcaat 436 ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 567 ccttttttggaatgccttcccgcattgccacaagcttctcgacaacctcaggcgggcaat 508 Query: 437 caggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaactctcagctg 496 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 507 caggttgatgttccagtatattagtgtaaatgagagtaaggctatccaaactctcagctg 448 Query: 497 aagctagctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttga 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 aagctagctccctcatatctgccagaatccgcactctgctttcaacttttgtcacgttga 388 Query: 557 tgtgttccctgaagaaatccataagcacctcttcatctaacctcatcctctctatcgttt 616 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 387 tgtgttccctgaagaaatccataagcacctcctcatctaacctcatcctctctatcgttt 328 Query: 617 cttcttttatgtagtttttctgagaaaggagatggtcaacatagaccacaattgtttcct 676 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 327 cttcttttatgtagtttttctgagaaagaagatggtcaacatagaccacaattgtttcct 268 Query: 677 ctatgcaagcctccaca 693 ||||||||||||||||| Sbjct: 267 ctatgcaagcctccaca 251 >gi|21217026|gb|AY112436.1| Zea mays CL20409_1 mRNA sequence Length = 547 Score = 759 bits (383), Expect = 0.0 Identities = 407/417 (97%) Strand = Plus / Plus Query: 166 tcatagagaagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 tcatagagaagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaa 190 Query: 226 gtccacacttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaat 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gtccacacttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaat 250 Query: 286 ttgccaaacacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ttgccaaacacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatc 310 Query: 346 tctttgcattcttgtacaacctccttggcttccttttttggaatgccttcccgcattgcc 405 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 311 tctttgcattcttgtacaacctccttggcttccnnnnnnggaatgccttcccgcattgcc 370 Query: 406 acaagcttataaaaaacctcaggcgggcaatcaggttgatgttccagtatattagtgtaa 465 |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 acaagcttctcgacaacctcaggcgggcaatcaggttgatgttccagtatattagtgtaa 430 Query: 466 atgagagtaaagctatccaaactctcagctgaagctagctccctcatatctgccagaatc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 atgagagtaaagctatccaaactctcagctgaagctagctccctcatatctgccagaatc 490 Query: 526 cgcactctgctttcaacttttgtcacgttgatgtgttccctgaagaaatccataagc 582 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 cgcactctgctttcaacttttgtcacgttgatgtgttccctgaagaaatccataagc 547 Score = 186 bits (94), Expect = 3e-45 Identities = 104/109 (95%) Strand = Plus / Plus Query: 36 atattcttacaccaaaatcctctgtagctaagcaaagtggaatatacatttttgctcctc 95 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1 atattcttacaccaaaatcctctgtagctaagcaaagtggaatatacannnnngctcctc 60 Query: 96 aagctgagtacacactgatagtctaaacgtgaaacccaacagtagcatc 144 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagctgagtacacactgatagtctaaacgtgaaacccaacagtagcatc 109 >gi|21217026|gb|AY112436.1| Zea mays CL20409_1 mRNA sequence Length = 547 Score = 759 bits (383), Expect = 0.0 Identities = 407/417 (97%) Strand = Plus / Plus Query: 166 tcatagagaagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 tcatagagaagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaa 190 Query: 226 gtccacacttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaat 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gtccacacttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaat 250 Query: 286 ttgccaaacacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ttgccaaacacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatc 310 Query: 346 tctttgcattcttgtacaacctccttggcttccttttttggaatgccttcccgcattgcc 405 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 311 tctttgcattcttgtacaacctccttggcttccnnnnnnggaatgccttcccgcattgcc 370 Query: 406 acaagcttataaaaaacctcaggcgggcaatcaggttgatgttccagtatattagtgtaa 465 |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 acaagcttctcgacaacctcaggcgggcaatcaggttgatgttccagtatattagtgtaa 430 Query: 466 atgagagtaaagctatccaaactctcagctgaagctagctccctcatatctgccagaatc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 atgagagtaaagctatccaaactctcagctgaagctagctccctcatatctgccagaatc 490 Query: 526 cgcactctgctttcaacttttgtcacgttgatgtgttccctgaagaaatccataagc 582 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 cgcactctgctttcaacttttgtcacgttgatgtgttccctgaagaaatccataagc 547 Score = 186 bits (94), Expect = 3e-45 Identities = 104/109 (95%) Strand = Plus / Plus Query: 36 atattcttacaccaaaatcctctgtagctaagcaaagtggaatatacatttttgctcctc 95 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1 atattcttacaccaaaatcctctgtagctaagcaaagtggaatatacannnnngctcctc 60 Query: 96 aagctgagtacacactgatagtctaaacgtgaaacccaacagtagcatc 144 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagctgagtacacactgatagtctaaacgtgaaacccaacagtagcatc 109 >gi|24934258|gb|CA452476.1|CA452476 Rxo-2_H09 subtracted cDNA library of maize inbred line B73 infected with Xanthomonas oryzae pv. oryzicola strain BLS222 Zea mays cDNA clone Rxo-2_H09, mRNA sequence Length = 592 Score = 620 bits (313), Expect = e-176 Identities = 328/333 (98%) Strand = Plus / Minus Query: 361 acaacctccttggcttccttttttggaatgccttcccgcattgccacaagcttataaaaa 420 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | | Sbjct: 592 acaacctccttcgcttccttttttggaatgccttcccgcattgccacaagcttctcgaca 533 Query: 421 acctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagcta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 acctcaggcgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagcta 473 Query: 481 tccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 tccaaactctcagctgaagctagctccctcatatctgccagaatccgcactctgctttca 413 Query: 541 acttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 acttttgtcacgttgatgtgttccctgaagaaatccataagcacctcttcatctaacctc 353 Query: 601 atcctctctatcgtttcttcttttatgtagtttttctgagaaaggagatggtcaacatag 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 atcctctctatcgtttcttcttttatgtagtttttctgagaaaggagatggtcaacatag 293 Query: 661 accacaattgtttcctctatgcaagcctccaca 693 ||||||||||||||||||||||||||||||||| Sbjct: 292 accacaattgtttcctctatgcaagcctccaca 260 >gi|45679888|gb|BV140365.1| PZA00545 Zea mays ssp. parviglumis Beadle & Kato site 4 Zea mays Beadle & Kato site 4 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 619 Score = 385 bits (194), Expect = e-105 Identities = 194/194 (100%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 119 bits (60), Expect = 5e-25 Identities = 63/64 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 556 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaagctatccaaact 615 Query: 489 ctca 492 |||| Sbjct: 616 ctca 619 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 425 >gi|45679889|gb|BV140366.1| PZA00545 Zea mays ssp. parviglumis Wilkes Site 6 Zea mays Wilkes Site 6 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 619 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 119 bits (60), Expect = 5e-25 Identities = 63/64 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 556 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtgaagctatccaaact 615 Query: 489 ctca 492 |||| Sbjct: 616 ctca 619 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 425 >gi|45679886|gb|BV140363.1| PZA00545 Zea mays ssp. parviglumis JSGyMAS 264 Zea mays JSGyMAS 264 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 620 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgtccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 99.6 bits (50), Expect = 5e-19 Identities = 64/66 (96%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttcca-gtatatt-agtgtaaatgagagtaaagctatccaaa 486 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccacgtatatttagtgtaaatgagagtaaagctatccaaa 614 Query: 487 ctctca 492 |||||| Sbjct: 615 ctctca 620 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679885|gb|BV140362.1| PZA00545 Zea mays ssp. parviglumis USDA PI566686 Zea mays USDA PI566686 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 575 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtttttgcctaggtggtacttttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 423 Score = 44.1 bits (22), Expect = 0.024 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttcc 450 |||||||||||||||||||||| Sbjct: 554 cgggcaatcaggttgatgttcc 575 >gi|45679883|gb|BV140360.1| PZA00545 Zea mays ssp. parviglumis JSG 378 Zea mays JSG 378 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 619 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 105 bits (53), Expect = 8e-21 Identities = 63/65 (96%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatatt-agtgtaaatgagagtaaagctatccaaac 487 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccagtatatttagtgtaaatgagagtgaagctatccaaac 614 Query: 488 tctca 492 ||||| Sbjct: 615 tctca 619 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679882|gb|BV140359.1| PZA00545 Zea mays ssp. parviglumis JSG 197 Zea mays JSG 197 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 612 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 Score = 56.0 bits (28), Expect = 6e-06 Identities = 48/52 (92%), Gaps = 2/52 (3%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttcca-gtata-ttagtgtaaatgagagtaaagc 478 ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 561 cgggcaatcgggttgatgttccacgtatagttagtgtaaatgagagtgaagc 612 >gi|45679881|gb|BV140358.1| PZA00545 Zea mays ssp. parviglumis JSGyMAS 401 Zea mays JSGyMAS 401 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 610 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgtccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 Score = 85.7 bits (43), Expect = 7e-15 Identities = 64/67 (95%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttcca-gtatatta-gtgtaaatgagagtaaagctatc-caa 485 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 544 cgggcaatcaggttgatgttccacgtatattacgtgtaaatgagagtaaagctatctcaa 603 Query: 486 actctca 492 ||||||| Sbjct: 604 actctca 610 >gi|45679880|gb|BV140357.1| PZA00545 Zea mays ssp. parviglumis JSGyLOS 130 Zea mays JSGyLOS 130 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 618 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgtccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 127 bits (64), Expect = 2e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 614 Query: 489 ctca 492 |||| Sbjct: 615 ctca 618 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679878|gb|BV140355.1| PZA00545 Zea mays ssp. mays CML322 Zea mays CML322 Zea mays STS genomic, sequence tagged site Length = 618 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgtccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 119 bits (60), Expect = 5e-25 Identities = 63/64 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaagctatccaaact 614 Query: 489 ctca 492 |||| Sbjct: 615 ctca 618 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679877|gb|BV140354.1| PZA00545 Zea mays ssp. mays Kul11 Zea mays Kul11 Zea mays STS genomic, sequence tagged site Length = 593 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtttttgcctaggtggtacttttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 423 Score = 71.9 bits (36), Expect = 1e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatg 468 ||||||||||||||||||||||||||| |||||||||||| Sbjct: 554 cgggcaatcaggttgatgttccagtattttagtgtaaatg 593 >gi|45679876|gb|BV140353.1| PZA00545 Zea mays ssp. mays Kul3 Zea mays Kul3 Zea mays STS genomic, sequence tagged site Length = 612 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtttttgcctaggtggtacttttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 107 bits (54), Expect = 2e-21 Identities = 57/58 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaa 486 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaagctatccaaa 612 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679875|gb|BV140352.1| PZA00545 Zea mays ssp. mays NC350 Zea mays NC350 Zea mays STS genomic, sequence tagged site Length = 618 Score = 369 bits (186), Expect = e-100 Identities = 192/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttactgtccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 127 bits (64), Expect = 2e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 614 Query: 489 ctca 492 |||| Sbjct: 615 ctca 618 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 424 >gi|45679887|gb|BV140364.1| PZA00545 Zea mays ssp. parviglumis Kato Site 4 Zea mays Kato Site 4 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 605 Score = 361 bits (182), Expect = 8e-98 Identities = 191/194 (98%) Strand = Plus / Plus Query: 174 aagtgaaacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacac 233 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 aagtgaaacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacac 60 Query: 234 ttactgcccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaa 293 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 61 ttactgcccaagcttcctccatatgcctttctttgctgtcaggcacttcaatttgccaaa 120 Query: 294 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaaaaccggacttctgagggttgccatccacaagcgagttctcgtatatctctttgca 180 Query: 354 ttcttgtacaacct 367 |||||||||||||| Sbjct: 181 ttcttgtacaacct 194 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 acctccttagcttccttttttggaatgccttcccgcattgccacaagctt 425 Score = 67.9 bits (34), Expect = 2e-09 Identities = 48/50 (96%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttcca-gtata-ttagtgtaaatgagagtaaa 476 ||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 556 cgggcaatcaggttgatgttccacgtatatttagtgtaaatgagagtaaa 605 >gi|45679879|gb|BV140356.1| PZA00545 Zea mays ssp. mays CML69 Zea mays CML69 Zea mays STS genomic, sequence tagged site Length = 552 Score = 357 bits (180), Expect = 1e-96 Identities = 186/188 (98%) Strand = Plus / Plus Query: 180 aacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactg 239 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 aacgtacagtctttgcctaggtggtgcgtttgtccactctgctcaagtccacacttactg 60 Query: 240 cccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 120 Query: 300 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 180 Query: 360 tacaacct 367 |||||||| Sbjct: 181 tacaacct 188 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 418 >gi|45679872|gb|BV140349.1| PZA00545 Zea mays ssp. mays Mo17(2) Zea mays Mo17(2) Zea mays STS genomic, sequence tagged site Length = 598 Score = 357 bits (180), Expect = 1e-96 Identities = 186/188 (98%) Strand = Plus / Plus Query: 180 aacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactg 239 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1 aacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacacttactg 60 Query: 240 cccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 120 Query: 300 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 180 Query: 360 tacaacct 367 |||||||| Sbjct: 181 tacaacct 188 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 acctccttcgcttccttttttggaatgccttcccgcattgccacaagctt 420 Score = 87.7 bits (44), Expect = 2e-15 Identities = 47/48 (97%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaa 476 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 551 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaa 598 >gi|45679870|gb|BV140347.1| PZA00545 Zea mays ssp. mays B73(1) Zea mays B73(1) Zea mays STS genomic, sequence tagged site Length = 602 Score = 357 bits (180), Expect = 1e-96 Identities = 186/188 (98%) Strand = Plus / Plus Query: 180 aacgtacagtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactg 239 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1 aacgtacagtctttgcctaggtggtacttctgtccactctgctcaagtccacacttactg 60 Query: 240 cccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cccaagcttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaa 120 Query: 300 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accggacttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttg 180 Query: 360 tacaacct 367 |||||||| Sbjct: 181 tacaacct 188 Score = 95.6 bits (48), Expect = 7e-18 Identities = 51/52 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagcta 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 551 cgggcaatcaggttgatgttcccgtatattagtgtaaatgagagtaaagcta 602 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 acctccttcgcttccttttttggaatgccttcccgcattgccacaagctt 420 >gi|45679871|gb|BV140348.1| PZA00545 Zea mays ssp. mays B73(2) Zea mays B73(2) Zea mays STS genomic, sequence tagged site Length = 592 Score = 343 bits (173), Expect = 2e-92 Identities = 179/181 (98%) Strand = Plus / Plus Query: 187 agtctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcccaagc 246 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtctttgcctaggtggtacttctgtccactctgctcaagtccacacttactgcccaagc 60 Query: 247 ttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggac 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggac 120 Query: 307 ttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacc 180 Query: 367 t 367 | Sbjct: 181 t 181 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 acctccttcgcttccttttttggaatgccttcccgcattgccacaagctt 413 Score = 73.8 bits (37), Expect = 3e-11 Identities = 47/49 (95%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatatt-agtgtaaatgagagtaaa 476 ||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 544 cgggcaatcaggttgatgttccagtattttaagtgtaaatgagagtaaa 592 >gi|45679873|gb|BV140350.1| PZA00545 Zea mays ssp. mays Ky21 Zea mays Ky21 Zea mays STS genomic, sequence tagged site Length = 605 Score = 339 bits (171), Expect = 3e-91 Identities = 177/179 (98%) Strand = Plus / Plus Query: 189 tctttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcccaagctt 248 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tctttgcctaggtggtacttctgtccactctgctcaagtccacacttactgcccaagctt 60 Query: 249 cctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggactt 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cctccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggactt 120 Query: 309 ctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacct 367 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctgagggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacct 179 Score = 119 bits (60), Expect = 5e-25 Identities = 63/64 (98%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaagctatccaaact 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 542 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaagctatccaaact 601 Query: 489 ctca 492 |||| Sbjct: 602 ctca 605 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 acctccttcgcttccttttttggaatgccttcccgcattgccacaagctt 411 >gi|45679874|gb|BV140351.1| PZA00545 Zea mays ssp. mays Hp301 Zea mays Hp301 Zea mays STS genomic, sequence tagged site Length = 586 Score = 333 bits (168), Expect = 2e-89 Identities = 174/176 (98%) Strand = Plus / Plus Query: 192 ttgcctaggtggtacgtttgtccactctgctcaagtccacacttactgcccaagcttcct 251 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgcctaggtggtacttctgtccactctgctcaagtccacacttactgcccaagcttcct 60 Query: 252 ccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatatgcctttctttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctg 120 Query: 312 agggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggttgccatccacaagcgagttctcgtatatctctttgcattcttgtacaacct 176 Score = 91.7 bits (46), Expect = 1e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 acctccttcgcttccttttttggaatgccttcccgcattgccacaagctt 408 Score = 87.7 bits (44), Expect = 2e-15 Identities = 47/48 (97%) Strand = Plus / Plus Query: 429 cgggcaatcaggttgatgttccagtatattagtgtaaatgagagtaaa 476 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 539 cgggcaatcaggttgatgttccagtattttagtgtaaatgagagtaaa 586 >gi|45679884|gb|BV140361.1| PZA00545 Zea mays ssp. parviglumis CIMMYT 11355 Zea mays CIMMYT 11355 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 519 Score = 313 bits (158), Expect = 2e-83 Identities = 161/162 (99%) Strand = Plus / Plus Query: 206 cgtttgtccactctgctcaagtccacacttactgcccaagcttcctccatatgcctttct 265 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3 cgtttgtccactctgctcaagtccacacttactgtccaagcttcctccatatgcctttct 62 Query: 266 ttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgccatcca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ttgctgtcaagcacttcaatttgccaaacacaaaaccggacttctgagggttgccatcca 122 Query: 326 caagcgagttctcgtatatctctttgcattcttgtacaacct 367 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 caagcgagttctcgtatatctctttgcattcttgtacaacct 164 Score = 99.6 bits (50), Expect = 5e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 364 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 413 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 acctccttggcttccttttttggaatgccttcccgcattgccacaagctt 395 >gi|9732457|gb|BE511209.1|BE511209 946058F08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 137 Score = 264 bits (133), Expect = 1e-68 Identities = 136/137 (99%) Strand = Plus / Plus Query: 22 attgaataaattacatattcttacaccaaaatcctctgtagctaagcaaagtggaatata 81 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 attgaataaattacatattcttacaccaaaatcctctgtagctaagcaaaggggaatata 60 Query: 82 catttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaacagtagc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 catttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaacagtagc 120 Query: 142 atcgacaaaagaacaaa 158 ||||||||||||||||| Sbjct: 121 atcgacaaaagaacaaa 137 >gi|9731114|gb|BE509866.1|BE509866 946067G09.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 117 Score = 232 bits (117), Expect = 5e-59 Identities = 117/117 (100%) Strand = Plus / Plus Query: 75 gaatatacatttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaatatacatttttgctcctcaagctgagtacacactgatagtctaaacgtgaaacccaa 60 Query: 135 cagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgtacagtct 191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cagtagcatcgacaaaagaacaaaagaatgatcatagagaagtgaaacgtacagtct 117 >gi|33091103|gb|CF051097.1|CF051097 QCM20f07.yg QCM Zea mays cDNA clone QCM20f07, mRNA sequence Length = 80 Score = 139 bits (70), Expect = 6e-31 Identities = 70/70 (100%) Strand = Plus / Minus Query: 111 tgatagtctaaacgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcata 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 tgatagtctaaacgtgaaacccaacagtagcatcgacaaaagaacaaaagaatgatcata 15 Query: 171 gagaagtgaa 180 |||||||||| Sbjct: 14 gagaagtgaa 5 >gi|6538913|gb|AW225052.1|AW225052 687023D09.x2 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 603 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 86 ctttgcattcttgtacaac 104 >gi|12972721|gb|BG268123.1|BG268123 1000165H12.x1 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 516 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 45 ctttgcattcttgtacaac 63 >gi|24767530|gb|CA402672.1|CA402672 EL01N0440G07.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 564 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 202 ctttgcattcttgtacaac 220 >gi|32867572|gb|CF007254.1|CF007254 QBI26h12.pg QBI Zea mays cDNA clone QBI26h12, mRNA sequence Length = 523 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 153 ctttgcattcttgtacaac 171 >gi|76918053|gb|DV167149.1|DV167149 ZM_BFb0165B11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 616 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 119 ctttgcattcttgtacaac 137 >gi|85540309|gb|BT024058.1| Zea mays clone EL01N0440G07 mRNA sequence Length = 1739 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 1561 ctttgcattcttgtacaac 1543 >gi|85540309|gb|BT024058.1| Zea mays clone EL01N0440G07 mRNA sequence Length = 1739 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 347 ctttgcattcttgtacaac 365 ||||||||||||||||||| Sbjct: 1561 ctttgcattcttgtacaac 1543 >gi|6012662|gb|AW062099.1|AW062099 660009H04.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 516 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 282 caatttgccaaacacaaa 299 |||||||||||||||||| Sbjct: 398 caatttgccaaacacaaa 381 >gi|18450685|gb|BM428963.1|BM428963 952026D04.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 625 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 524 tccgcactctgctttcaa 541 |||||||||||||||||| Sbjct: 359 tccgcactctgctttcaa 376 >gi|19272472|gb|BM888728.1|BM888728 952068D07.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 348 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 84 tttttgctcctcaagctg 101 |||||||||||||||||| Sbjct: 192 tttttgctcctcaagctg 209 >gi|19351633|gb|BM896165.1|BM896165 952067D07.x1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 515 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 84 tttttgctcctcaagctg 101 |||||||||||||||||| Sbjct: 255 tttttgctcctcaagctg 238 >gi|22489780|gb|BU049703.1|BU049703 1111013B04.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 462 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 524 tccgcactctgctttcaa 541 |||||||||||||||||| Sbjct: 349 tccgcactctgctttcaa 366 >gi|22489865|gb|BU049788.1|BU049788 1111014F06.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 614 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 524 tccgcactctgctttcaa 541 |||||||||||||||||| Sbjct: 343 tccgcactctgctttcaa 360 >gi|22491208|gb|BU051131.1|BU051131 1111039A05.y2 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 522 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 84 tttttgctcctcaagctg 101 |||||||||||||||||| Sbjct: 249 tttttgctcctcaagctg 266 >gi|67037440|gb|CO464256.1|CO464256 MZCCL15043C11.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 833 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 676 tctatgcaagcctccaca 693 |||||||||||||||||| Sbjct: 786 tctatgcaagcctccaca 769 >gi|76013902|gb|DT941072.1|DT941072 ZM_BFb0124E04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 812 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 84 tttttgctcctcaagctg 101 |||||||||||||||||| Sbjct: 28 tttttgctcctcaagctg 45 >gi|89106376|gb|DY576593.1|DY576593 III-952-4B-F06.M13-R UGIII-Reseq Zea mays cDNA, mRNA sequence Length = 700 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 524 tccgcactctgctttcaa 541 |||||||||||||||||| Sbjct: 337 tccgcactctgctttcaa 354 >gi|14028756|gb|AF360356.1|AF360356 Zea mays male fertility protein (Ms45) gene, complete cds Length = 3343 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 282 caatttgccaaacacaaa 299 |||||||||||||||||| Sbjct: 3039 caatttgccaaacacaaa 3022 >gi|91064998|gb|AC184774.1| Zea mays chromosome UNK clone CH201-25M22; ZMMBBc0025M22, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 178708 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 148 aaaagaacaaaagaatga 165 |||||||||||||||||| Sbjct: 7727 aaaagaacaaaagaatga 7710 >gi|89365856|gb|AC183590.1| Zea mays chromosome UNK clone CH201-148I16; ZMMBBc0148I16, *** SEQUENCING IN PROGRESS ***, 25 unordered pieces Length = 178125 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 343 atctctttgcattcttgt 360 |||||||||||||||||| Sbjct: 42678 atctctttgcattcttgt 42661 Score = 36.2 bits (18), Expect = 5.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 343 atctctttgcattcttgt 360 |||||||||||||||||| Sbjct: 30068 atctctttgcattcttgt 30085 >gi|58082404|gb|AC155545.2| Zea mays strain B73 clone ZMMBBc0154D18, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 177982 Score = 36.2 bits (18), Expect = 5.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 600 catcctctctatcgtttcttct 621 ||||||||||||| |||||||| Sbjct: 46962 catcctctctatcttttcttct 46941 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 232,329 Number of Sequences: 836351 Number of extensions: 232329 Number of successful extensions: 18255 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 18133 Number of HSP's gapped (non-prelim): 111 length of query: 721 length of database: 669,372,029 effective HSP length: 19 effective length of query: 702 effective length of database: 653,481,360 effective search space: 458743914720 effective search space used: 458743914720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)