BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3713074.2.1 (527 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|12045953|gb|BF727988.1|BF727988 1000057B03.x4 1000 - Unigene ... 1037 0.0 gi|78179082|gb|DV549455.1|DV549455 1000057-B03.GAD10-F UGI-Reseq... 1021 0.0 gi|6827323|gb|AW330966.1|AW330966 707030H04.x2 707 - Mixed adult... 632 e-179 gi|58082267|gb|AC155405.2| Zea mays strain B73 clone ZMMBBb0180B... 274 1e-71 gi|71725485|gb|AC166637.1| Zea mays strain B73 clone ZMMBBb0171P... 149 4e-34 gi|16916141|gb|BM072713.1|BM072713 MEST52-B12.T3 ISUM4-TN Zea ma... 135 6e-30 gi|90992704|gb|AC184707.1| Zea mays chromosome UNK clone CH201-1... 131 1e-28 gi|88687870|gb|AC182837.1| Zea mays chromosome UNK clone CH201-1... 121 9e-26 gi|33095197|gb|CF055191.1|CF055191 QCN38c01.yg QCN Zea mays cDNA... 109 4e-22 gi|89257709|gb|AC177820.2| Zea mays chromosome UNK clone CH201-2... 103 2e-20 gi|9730958|gb|BE509710.1|BE509710 946020H10.x1 946 - tassel prim... 84 2e-14 gi|89257796|gb|AC182423.2| Zea mays chromosome UNK clone CH201-1... 74 2e-11 gi|9952643|gb|BE639331.1|BE639331 946020H10.y2 946 - tassel prim... 64 2e-08 gi|47081654|gb|BV145551.1| PZA02533-77612-GT119 Zea mays GT119 Z... 60 3e-07 gi|47081655|gb|BV145552.1| PZA02533-77623-Mo17 Zea mays Mo17 Zea... 56 5e-06 gi|47081660|gb|BV145557.1| PZA02533-77615-Tx501 Zea mays Tx501 Z... 52 7e-05 gi|14244378|gb|BG842386.2|BG842386 MEST30-C08.T3 ISUM4-TN Zea ma... 50 3e-04 gi|8273037|gb|BE012134.1|BE012134 945013D11.Y1 945 - Mixed adult... 48 0.001 gi|14242699|gb|BG840414.2|BG840414 MEST12-C07.T7-1 ISUM4-TN Zea ... 48 0.001 gi|14243179|gb|BG840823.2|BG840823 MEST12-C07.T3 ISUM4-TN Zea ma... 48 0.001 gi|30032125|gb|CB833976.1|CB833976 3529_1_86_1_C03.x_1 3529 - 2 ... 48 0.001 gi|32856634|gb|CD996315.1|CD996315 QBC2c12.xg QBC Zea mays cDNA ... 48 0.001 gi|37377103|gb|CF625126.1|CF625126 zmrws05_0A20-013-d04.s3 zmrws... 48 0.001 gi|60345546|gb|DN212519.1|DN212519 MEST941_H09.T7-1 UGA-ZmSAM-XZ... 48 0.001 gi|60350740|gb|DN217713.1|DN217713 MEST1055_B04.T7-1 UGA-ZmSAM-X... 48 0.001 gi|60351903|gb|DN218876.1|DN218876 MEST1073_C04.T7-1 UGA-ZmSAM-X... 48 0.001 gi|71313349|gb|DR793216.1|DR793216 ZM_BFb0013F24.f ZM_BFb Zea ma... 48 0.001 gi|71323621|gb|DR798491.1|DR798491 ZM_BFb0021A15.f ZM_BFb Zea ma... 48 0.001 gi|71332012|gb|DR802903.1|DR802903 ZM_BFb0027F12.f ZM_BFb Zea ma... 48 0.001 gi|76011522|gb|DT938692.1|DT938692 ZM_BFb0120E07.f ZM_BFb Zea ma... 48 0.001 gi|78082578|gb|DV510990.1|DV510990 ZM_BFb0190O23.f ZM_BFb Zea ma... 48 0.001 gi|88748898|gb|DY533039.1|DY533039 ZM_BFb0263H18.f ZM_BFb Zea ma... 48 0.001 gi|89247041|gb|DY618827.1|DY618827 ZM_BFb0274P18.f ZM_BFb Zea ma... 48 0.001 gi|54653905|gb|BT019124.1| Zea mays clone Contig738.F mRNA sequence 48 0.001 gi|47098543|gb|BV149086.1| PZA01934-74176-W22_R-scm2 Zea mays W2... 48 0.001 gi|47098542|gb|BV149085.1| PZA01934-74164-Tx501 Zea mays Tx501 Z... 48 0.001 gi|47098541|gb|BV149084.1| PZA01934-74174-Tx303 Zea mays Tx303 Z... 48 0.001 gi|47098540|gb|BV149083.1| PZA01934-74173-T218 Zea mays T218 Zea... 48 0.001 gi|47098539|gb|BV149082.1| PZA01934-74175-NC7A Zea mays NC7A Zea... 48 0.001 gi|47098538|gb|BV149081.1| PZA01934-74163-Mp708 Zea mays Mp708 Z... 48 0.001 gi|47098537|gb|BV149080.1| PZA01934-74172-Mo17 Zea mays Mo17 Zea... 48 0.001 gi|47098536|gb|BV149079.1| PZA01934-74177-ILO Zea mays ILO Zea m... 48 0.001 gi|47098535|gb|BV149078.1| PZA01934-74165-IHO Zea mays IHO Zea m... 48 0.001 gi|47098534|gb|BV149077.1| PZA01934-74161-GT119 Zea mays GT119 Z... 48 0.001 gi|47098533|gb|BV149076.1| PZA01934-74162-CO159 Zea mays CO159 Z... 48 0.001 gi|47098532|gb|BV149075.1| PZA01934-74160-B73 Zea mays B73 Zea m... 48 0.001 gi|47081659|gb|BV145556.1| PZA02533-77625-Tx303 Zea mays Tx303 Z... 48 0.001 gi|54653905|gb|BT019124.1| Zea mays clone Contig738.F mRNA sequence 48 0.001 gi|7135175|gb|AW497968.1|AW497968 660042B11.y1 660 - Mixed stage... 46 0.004 gi|8665786|gb|BE186602.1|BE186602 946009B03.X1 946 - tassel prim... 46 0.004 gi|9028756|gb|BE238796.1|BE238796 946009B03.y1 946 - tassel prim... 46 0.004 gi|9743049|gb|BE519197.1|BE519197 946094E04.x1 946 - tassel prim... 46 0.004 gi|21809572|gb|BQ667890.1|BQ667890 946101G12.x1 946 - tassel pri... 46 0.004 gi|24769343|gb|CA404472.1|CA404472 EL01N0518E10.g Endosperm_4 Ze... 46 0.004 gi|30087020|gb|CB885228.1|CB885228 3529_1_82_1_F10.x_1 3529 - 2 ... 46 0.004 gi|30706012|gb|CD059000.1|CD059000 3529_1_107_1_A02.x_1 3529 - 2... 46 0.004 gi|31354534|gb|CD438891.1|CD438891 EL01N0518E10.b Endosperm_5 Ze... 46 0.004 gi|31354864|gb|CD439221.1|CD439221 EL01N0522D01.b Endosperm_5 Ze... 46 0.004 gi|32838366|gb|CD978044.1|CD978044 QAF38a12.yg QAF Zea mays cDNA... 46 0.004 gi|32868324|gb|CF008006.1|CF008006 QBI6f06.pg QBI Zea mays cDNA ... 46 0.004 gi|34391259|gb|CF384487.1|CF384487 EST3335 Zea mays sperm cell c... 46 0.004 gi|60340881|gb|DN207854.1|DN207854 MEST861_B03.T7-1 UGA-ZmSAM-XZ... 46 0.004 gi|60341934|gb|DN208907.1|DN208907 MEST877_F05.T7-1 UGA-ZmSAM-XZ... 46 0.004 gi|60342221|gb|DN209194.1|DN209194 MEST882_G01.T7-1 UGA-ZmSAM-XZ... 46 0.004 gi|67015965|gb|CO444714.1|CO444714 MZCCL10075C06.g Maize Endospe... 46 0.004 gi|67023118|gb|CO451867.1|CO451867 MZCCL10169C08.g Maize Endospe... 46 0.004 gi|76923262|gb|DV169399.1|DV169399 ZM_BFb0168H16.f ZM_BFb Zea ma... 46 0.004 gi|87155703|gb|DY400492.1|DY400492 V-946-1B-C11.T7-1 UGV-Reseq Z... 46 0.004 gi|54651555|gb|BT016774.1| Zea mays clone Contig607 mRNA sequence 46 0.004 gi|21214247|gb|AY110134.1| Zea mays CL909_1 mRNA sequence 46 0.004 gi|21215574|gb|AY110984.1| Zea mays CL857_3 mRNA sequence 46 0.004 gi|54651555|gb|BT016774.1| Zea mays clone Contig607 mRNA sequence 46 0.004 gi|21215574|gb|AY110984.1| Zea mays CL857_3 mRNA sequence 46 0.004 gi|21214247|gb|AY110134.1| Zea mays CL909_1 mRNA sequence 46 0.004 gi|9566493|gb|BE476002.1|BE476002 946050G06.y2 946 - tassel prim... 42 0.069 gi|19351412|gb|BM895959.1|BM895959 952071B10.y1 952 - BMS tissue... 42 0.069 gi|20301316|gb|BQ164259.1|BQ164259 1091018B11.y4 1091 - Immature... 42 0.069 gi|22491107|gb|BU051030.1|BU051030 1111037E12.y2 1111 - Unigene ... 42 0.069 gi|87152377|gb|DY397166.1|DY397166 III-952-10A-E12.M13-R UGIII-R... 42 0.069 gi|7145150|gb|AW506631.1|AW506631 660058B12.y1 660 - Mixed stage... 40 0.27 gi|21759928|gb|BQ635469.1|BQ635469 1091071A05.x1 1091 - Immature... 40 0.27 gi|23199824|gb|BU582389.1|BU582389 946188H03.y1 946 - tassel pri... 40 0.27 gi|26560087|gb|CA832322.1|CA832322 1117031D04.y1 1117 - Unigene ... 40 0.27 gi|31357175|gb|CD441532.1|CD441532 EL01N0558H07.g Endosperm_5 Ze... 40 0.27 gi|31359016|gb|CD443373.1|CD443373 EL01N0425E02.b Endosperm_4 Ze... 40 0.27 gi|32857278|gb|CD996959.1|CD996959 QBD1h07.xg QBD Zea mays cDNA ... 40 0.27 gi|32915205|gb|CF020017.1|CF020017 QBN25e02.xg QBN Zea mays cDNA... 40 0.27 gi|32943230|gb|CF048049.1|CF048049 QCL17a06.yg QCL Zea mays cDNA... 40 0.27 gi|33092953|gb|CF052947.1|CF052947 QCN10b12.yg QCN Zea mays cDNA... 40 0.27 gi|37381897|gb|CF627855.1|CF627855 zmrws05_0B20-016-a05.s3 zmrws... 40 0.27 gi|37383072|gb|CF628514.1|CF628514 zmrws48_0A10-006-g02.s4 zmrws... 40 0.27 gi|37391421|gb|CF632953.1|CF632953 zmrws48_0B20-009-h03.s3 zmrws... 40 0.27 gi|50339454|gb|CO534580.1|CO534580 3530_1_228_1_F06.y_1 3530 - F... 40 0.27 gi|60336831|gb|DN203804.1|DN203804 MEST902_G09.T7-1 UGA-ZmSAM-XZ... 40 0.27 gi|60338062|gb|DN205035.1|DN205035 MEST813_E04.T7-1 UGA-ZmSAM-XZ... 40 0.27 gi|60343591|gb|DN210564.1|DN210564 MEST911_E11.T7-1 UGA-ZmSAM-XZ... 40 0.27 gi|60351687|gb|DN218660.1|DN218660 MEST1070_C04.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60352410|gb|DN219383.1|DN219383 MEST1080_E09.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60354870|gb|DN221843.1|DN221843 MEST1120_F07.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60355594|gb|DN222567.1|DN222567 MEST1130_F01.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60356496|gb|DN223469.1|DN223469 MEST1143_H03.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60356862|gb|DN223835.1|DN223835 MEST1148_H08.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60356866|gb|DN223839.1|DN223839 MEST1148_G09.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60357517|gb|DN224490.1|DN224490 MEST1159_C08.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60358171|gb|DN225144.1|DN225144 MEST1170_D06.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60394829|gb|DN227698.1|DN227698 MEST1209_D05.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60396453|gb|DN229322.1|DN229322 MEST1013_C12.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60397378|gb|DN230194.1|DN230194 MEST1023_G05.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60398461|gb|DN231277.1|DN231277 MEST1147_A05.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60398637|gb|DN231453.1|DN231453 MEST1173_A06.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60398770|gb|DN231586.1|DN231586 MEST1124_A07.T7-1 UGA-ZmSAM-X... 40 0.27 gi|60399274|gb|DN232088.1|DN232088 MEST1119_A10.T7-1 UGA-ZmSAM-X... 40 0.27 gi|61119115|gb|DN560076.1|DN560076 ME21-C03-T3-96-R1 E7PCR Zea m... 40 0.27 gi|67013647|gb|CO442396.1|CO442396 MZCCL10046A06.g Maize Endospe... 40 0.27 gi|71432314|gb|DR813364.1|DR813364 ZM_BFb0042H24.r ZM_BFb Zea ma... 40 0.27 gi|78024809|gb|DV493196.1|DV493196 1000220-D09.T7-1 UGI-Reseq Ze... 40 0.27 gi|86468607|gb|DY234977.1|DY234977 ZM_BFb0245H07.f ZM_BFb Zea ma... 40 0.27 gi|87155535|gb|DY400324.1|DY400324 V-946-1B-D08.T7-1 UGV-Reseq Z... 40 0.27 gi|87157390|gb|DY402179.1|DY402179 V-946-8D-D04.Gal4-R UGV-Reseq... 40 0.27 gi|91053920|gb|EB164338.1|EB164338 ZM_BFb0324F08.f ZM_BFb Zea ma... 40 0.27 gi|47081657|gb|BV145554.1| PZA02533-77626-NC7A Zea mays NC7A Zea... 40 0.27 gi|47081653|gb|BV145550.1| PZA02533-77613-CO159 Zea mays CO159 Z... 40 0.27 gi|90568308|gb|AC183954.1| Zea mays chromosome UNK clone ZMMBBb-... 40 0.27 gi|5525334|gb|AI861173.1|AI861173 603017D02.x1 603 - stressed ro... 38 1.1 gi|21843460|gb|BQ704041.1|BQ704041 946109F10.x1 946 - tassel pri... 38 1.1 gi|32839124|gb|CD978805.1|CD978805 QAF5c04.yg QAF Zea mays cDNA ... 38 1.1 gi|40302785|gb|CK347172.1|CK347172 zmrsub1_0A10-003-f12.s2 zmrsu... 38 1.1 gi|40303829|gb|CK348216.1|CK348216 zmrsub1_0X10-002-b09.s1 zmrsu... 38 1.1 gi|71440212|gb|DR821262.1|DR821262 ZM_BFb0060H13.f ZM_BFb Zea ma... 38 1.1 gi|84969290|gb|DW467733.1|DW467733 ZM_BFb0110A08.f ZM_BFb Zea ma... 38 1.1 gi|58082321|gb|AC155460.2| Zea mays strain B73 clone ZMMBBb0468O... 38 1.1 gi|47081658|gb|BV145555.1| PZA02533-77624-T218 Zea mays T218 Zea... 36 4.3 gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-2... 36 4.3 >gi|12045953|gb|BF727988.1|BF727988 1000057B03.x4 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 527 Score = 1037 bits (523), Expect = 0.0 Identities = 526/527 (99%) Strand = Plus / Plus Query: 1 gcgtcaataggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtcaataggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 60 Query: 61 gtgtgcatccatgctagggccaagggaacaagccgtcctacgcattaccatgtgctacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgtgcatccatgctagggccaagggaacaagccgtcctacgcattaccatgtgctacga 120 Query: 121 gatgacaacaagttcaccgcagatgctctgcagtctctaacatataacttgtgctacatt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gatgacaacaagttcaccgcagatgctctgcagtctctaacatataacttgtgctacatt 180 Query: 181 gcgcagatcatccagggcggacctataagatgtcaagtgtgtacgccccaacaacccaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcgcagatcatccagggcggacctataagatgtcaagtgtgtacgccccaacaacccaca 240 Query: 241 gatgcggctcgacgctctccatcgtctggtataccaggataggcttcaagagaggctaag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gatgcggctcgacgctctccatcgtctggtataccaggataggcttcaagagaggctaag 300 Query: 301 aaaatctaagtgcttaggacttgaagaggctgcaaagaacaaaggttttgaccttggtaa 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aaaatctaagtgtttaggacttgaagaggctgcaaagaacaaaggttttgaccttggtaa 360 Query: 361 cgatgcactcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgatgcactcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcag 420 Query: 421 tagcttcacacttggttcatcggacaacaggtctttgaactaagtagagtggaaggaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagcttcacacttggttcatcggacaacaggtctttgaactaagtagagtggaaggaaac 480 Query: 481 tgaacctaacacccatccatgacccagcttacatataggtgggttta 527 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tgaacctaacacccatccatgacccagcttacatataggtgggttta 527 >gi|78179082|gb|DV549455.1|DV549455 1000057-B03.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 704 Score = 1021 bits (515), Expect = 0.0 Identities = 524/527 (99%) Strand = Plus / Plus Query: 1 gcgtcaataggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 gcgtcaataggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 93 Query: 61 gtgtgcatccatgctagggccaagggaacaagccgtcctacgcattaccatgtgctacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gtgtgcatccatgctagggccaagggaacaagccgtcctacgcattaccatgtgctacga 153 Query: 121 gatgacaacaagttcaccgcagatgctctgcagtctctaacatataacttgtgctacatt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gatgacaacaagttcaccgcagatgctctgcagtctctaacatataacttgtgctacatt 213 Query: 181 gcgcagatcatccagggcggacctataagatgtcaagtgtgtacgccccaacaacccaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gcgcagatcatccagggcggacctataagatgtcaagtgtgtacgccccaacaacccaca 273 Query: 241 gatgcggctcgacgctctccatcgtctggtataccaggataggcttcaagagaggctaag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gatgcggctcgacgctctccatcgtctggtataccaggataggcttcaagagaggctaag 333 Query: 301 aaaatctaagtgcttaggacttgaagaggctgcaaagaacaaaggttttgaccttggtaa 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 aaaatctaagtgtttaggacttgaagaggctgcaaagaacaaaggttttgaccttggtaa 393 Query: 361 cgatgcactcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 cgatgcactcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcag 453 Query: 421 tagcttcacacttggttcatcggacaacaggtctttgaactaagtagagtggaaggaaac 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 454 tagcttcacacttggttcatcggacaacagttctttgaactaagtagagtggaaggaaac 513 Query: 481 tgaacctaacacccatccatgacccagcttacatataggtgggttta 527 |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 514 tgaacctaacacccatccatgacccagcttacatataggtggtttta 560 >gi|6827323|gb|AW330966.1|AW330966 707030H04.x2 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 326 Score = 632 bits (319), Expect = e-179 Identities = 324/326 (99%) Strand = Plus / Plus Query: 48 atttgatttcttcgtgtgcatccatgctagggccaagggaacaagccgtcctacgcatta 107 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 atttgatttcttcgtgtgcatccatgctagggccaagggaacaagccgncctacgcatta 60 Query: 108 ccatgtgctacgagatgacaacaagttcaccgcagatgctctgcagtctctaacatataa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgtgctacgagatgacaacaagttcaccgcagatgctctgcagtctctaacatataa 120 Query: 168 cttgtgctacattgcgcagatcatccagggcggacctataagatgtcaagtgtgtacgcc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttgtgctacattgcgcagatcatccagggcggacctataagatgtcaagtgtgtacgcc 180 Query: 228 ccaacaacccacagatgcggctcgacgctctccatcgtctggtataccaggataggcttc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaacaacccacagatgcggctcgacgctctccatcgtctggtataccaggataggcttc 240 Query: 288 aagagaggctaagaaaatctaagtgcttaggacttgaagaggctgcaaagaacaaaggtt 347 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 241 aagagaggctaagaaaatctaagtgcttaggacttgaagaggctgcacagaacaaaggtt 300 Query: 348 ttgaccttggtaacgatgcactcatt 373 |||||||||||||||||||||||||| Sbjct: 301 ttgaccttggtaacgatgcactcatt 326 >gi|58082267|gb|AC155405.2| Zea mays strain B73 clone ZMMBBb0180B23, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces Length = 132263 Score = 274 bits (138), Expect = 1e-71 Identities = 153/158 (96%) Strand = Plus / Plus Query: 362 gatgcactcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcagt 421 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43837 gatgcactcattacaaactgttgaggaggaataactatttggcagatgcagacatgcagt 43896 Query: 422 agcttcacacttggttcatcggacaacaggtctttgaactaagtagagtggaaggaaact 481 ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||| Sbjct: 43897 agcttcacacttggttcatcggacaacagttctttgaactgagtacagtggaaggcaact 43956 Query: 482 gaacctaacacccatccatgacccagcttacatatagg 519 |||||||||||||||||||||||||||||||||||||| Sbjct: 43957 gaacctaacacccatccatgacccagcttacatatagg 43994 Score = 87.7 bits (44), Expect = 1e-15 Identities = 44/44 (100%) Strand = Plus / Plus Query: 368 ctcattgcaaactgttgaggaggaataactatttggcagatgca 411 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43799 ctcattgcaaactgttgaggaggaataactatttggcagatgca 43842 >gi|71725485|gb|AC166637.1| Zea mays strain B73 clone ZMMBBb0171P15, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces Length = 132900 Score = 149 bits (75), Expect = 4e-34 Identities = 90/95 (94%) Strand = Plus / Minus Query: 369 tcattgcaaactgttgaggaggaataactatttggcagatgcagacatgcagtagcttca 428 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 32632 tcattgcaaactgttgaggaggaataactatttggcagatgcagacatgttgtagcttca 32573 Query: 429 cacttggttcatcggacaacaggtctttgaactaa 463 ||||| |||||||||||||||| ||||||| |||| Sbjct: 32572 cacttcgttcatcggacaacagttctttgacctaa 32538 Score = 63.9 bits (32), Expect = 2e-08 Identities = 35/36 (97%) Strand = Plus / Minus Query: 484 acctaacacccatccatgacccagcttacatatagg 519 ||||||||||||||||||||| |||||||||||||| Sbjct: 32543 acctaacacccatccatgacctagcttacatatagg 32508 >gi|16916141|gb|BM072713.1|BM072713 MEST52-B12.T3 ISUM4-TN Zea mays cDNA clone MEST52-B12 3', mRNA sequence Length = 657 Score = 135 bits (68), Expect = 6e-30 Identities = 122/140 (87%) Strand = Plus / Minus Query: 29 atatctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaa 88 |||||||||||||||||||||||||||||||| || ||| ||||||| || |||||||| Sbjct: 548 atatctgccacccaacagaatttgatttcttcctgcgcacccatgctgggatcaagggaa 489 Query: 89 caagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcagatgctc 148 | ||||||||| |||||| |||||| || |||| |||||||| ||||| ||||| || | Sbjct: 488 ctagccgtcctgcgcattcccatgtcctgagagacgacaacaacttcactgcagacgcgc 429 Query: 149 tgcagtctctaacatataac 168 |||||||||| ||||||||| Sbjct: 428 tgcagtctctcacatataac 409 >gi|90992704|gb|AC184707.1| Zea mays chromosome UNK clone CH201-128F20; ZMMBBc0128F20, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces Length = 160971 Score = 131 bits (66), Expect = 1e-28 Identities = 87/94 (92%) Strand = Plus / Plus Query: 185 agatcatccagggcggacctataagatgtcaagtgtgtacgccccaacaacccacagatg 244 ||||||||| |||| | |||||||| | |||||||||||||||||||||||||| ||||| Sbjct: 105258 agatcatccggggcagccctataagttatcaagtgtgtacgccccaacaacccatagatg 105317 Query: 245 cggctcgacgctctccatcgtctggtataccagg 278 ||||||| |||||||||||||||||||||||||| Sbjct: 105318 cggctcggcgctctccatcgtctggtataccagg 105351 Score = 115 bits (58), Expect = 6e-24 Identities = 79/86 (91%) Strand = Plus / Plus Query: 277 ggataggcttcaagagaggctaagaaaatctaagtgcttaggacttgaagaggctgcaaa 336 |||||||||||| |||||||||||||| ||||| || ||| ||||||||||||||||| Sbjct: 106347 ggataggcttcaggagaggctaagaaagtctaaatgtttaatccttgaagaggctgcaaa 106406 Query: 337 gaacaaaggttttgaccttggtaacg 362 |||||||||||||||||||||||||| Sbjct: 106407 gaacaaaggttttgaccttggtaacg 106432 >gi|88687870|gb|AC182837.1| Zea mays chromosome UNK clone CH201-168D12, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 136851 Score = 121 bits (61), Expect = 9e-26 Identities = 73/77 (94%) Strand = Plus / Plus Query: 9 aggcaccgtagttgataataatatctgccacccaacagaatttgatttcttcgtgtgcat 68 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105611 aggcaccgtagttgataataatatctgccacccaacagaatttgatttcttcctgtgcgg 105670 Query: 69 ccatgctagggccaagg 85 ||||||| ||||||||| Sbjct: 105671 ccatgctggggccaagg 105687 Score = 117 bits (59), Expect = 1e-24 Identities = 62/63 (98%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105771 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacacgttcaccgcag 105830 Query: 143 atg 145 ||| Sbjct: 105831 atg 105833 >gi|33095197|gb|CF055191.1|CF055191 QCN38c01.yg QCN Zea mays cDNA clone QCN38c01, mRNA sequence Length = 627 Score = 109 bits (55), Expect = 4e-22 Identities = 79/87 (90%) Strand = Plus / Minus Query: 276 aggataggcttcaagagaggctaagaaaatctaagtgcttaggacttgaagaggctgcaa 335 ||||||||||||| ||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 299 aggataggcttcaggagtggctaagaaagtctaagcggttaatccttgaagaggctgcaa 240 Query: 336 agaacaaaggttttgaccttggtaacg 362 ||||||||||||||||||||||||||| Sbjct: 239 agaacaaaggttttgaccttggtaacg 213 >gi|89257709|gb|AC177820.2| Zea mays chromosome UNK clone CH201-242M10; ZMMBBc0242M10, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 281045 Score = 103 bits (52), Expect = 2e-20 Identities = 64/68 (94%) Strand = Plus / Plus Query: 452 tctttgaactaagtagagtggaaggaaactgaacctaacacccatccatgacccagctta 511 |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 14500 tctttgaactgagtagagtggaaggcaacttcacctaacacccatccatgacccagctta 14559 Query: 512 catatagg 519 |||||||| Sbjct: 14560 catatagg 14567 >gi|9730958|gb|BE509710.1|BE509710 946020H10.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 563 Score = 83.8 bits (42), Expect = 2e-14 Identities = 75/86 (87%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||| ||||||||| ||||||||||||| || |||| |||||||| ||||| |||| Sbjct: 563 agggaactagccgtcctgcgcattaccatgtcctgagagacgacaacaacttcactgcag 504 Query: 143 atgctctgcagtctctaacatataac 168 | || ||||||||||| ||||||||| Sbjct: 503 acgcgctgcagtctctcacatataac 478 >gi|89257796|gb|AC182423.2| Zea mays chromosome UNK clone CH201-125K21; ZMMBBc0125K21, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 192475 Score = 73.8 bits (37), Expect = 2e-11 Identities = 52/57 (91%) Strand = Plus / Plus Query: 88 acaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcagat 144 ||||||| |||||||||||||||||| || ||||||||||||||||||| |||||| Sbjct: 120571 acaagccatcctacgcattaccatgttctgagagatgacaacaagttcacggcagat 120627 Score = 58.0 bits (29), Expect = 1e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 102 gcattaccatgtgctacgagatgacaacaagttcaccgcagatgc 146 |||||||||||| || ||||||||||||||||||| |||||||| Sbjct: 120647 gcattaccatgttctgagagatgacaacaagttcacggcagatgc 120691 Score = 52.0 bits (26), Expect = 7e-05 Identities = 50/58 (86%) Strand = Plus / Minus Query: 8 taggcaccgtagttgataataatatctgccacccaacagaatttgatttcttcgtgtg 65 ||||||| ||||||||||| |||||||||||| | | |||||||| |||||| |||| Sbjct: 119875 taggcactgtagttgataagaatatctgccactctatagaatttgtattcttcctgtg 119818 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 gagatgacaacaagttcac 137 ||||||||||||||||||| Sbjct: 119684 gagatgacaacaagttcac 119666 >gi|9952643|gb|BE639331.1|BE639331 946020H10.y2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 350 Score = 63.9 bits (32), Expect = 2e-08 Identities = 32/32 (100%) Strand = Plus / Plus Query: 29 atatctgccacccaacagaatttgatttcttc 60 |||||||||||||||||||||||||||||||| Sbjct: 317 atatctgccacccaacagaatttgatttcttc 348 >gi|47081654|gb|BV145551.1| PZA02533-77612-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 514 Score = 60.0 bits (30), Expect = 3e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 119 gagatgacaacaagttcaccgcagatgctctgcagtctctaacatataac 168 |||| |||||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 499 gagacgacaacaacttcactgcagatgcgctgcagtctctcacatataac 450 >gi|47081655|gb|BV145552.1| PZA02533-77623-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 554 Score = 56.0 bits (28), Expect = 5e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 125 acaacaagttcaccgcagatgctctgcagtctctaacatataac 168 ||||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 554 acaacaaattcactgcagatgcgctgcagtctctcacatataac 511 >gi|47081660|gb|BV145557.1| PZA02533-77615-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 508 Score = 52.0 bits (26), Expect = 7e-05 Identities = 44/50 (88%) Strand = Plus / Minus Query: 119 gagatgacaacaagttcaccgcagatgctctgcagtctctaacatataac 168 |||| |||||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 508 gagacgacaacaacttcactgcagacgcgctgcagtctctcacatataac 459 >gi|14244378|gb|BG842386.2|BG842386 MEST30-C08.T3 ISUM4-TN Zea mays cDNA clone MEST30-C08 3', mRNA sequence Length = 542 Score = 50.1 bits (25), Expect = 3e-04 Identities = 40/45 (88%) Strand = Plus / Minus Query: 124 gacaacaagttcaccgcagatgctctgcagtctctaacatataac 168 |||||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 541 gacaacaacttcactgcagacgcgctgcagtctctcacatataac 497 >gi|8273037|gb|BE012134.1|BE012134 945013D11.Y1 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence Length = 518 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 308 cctaacatccatccatgacccagcttac 281 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 387 atgcagtagcttgacacttggtt 365 >gi|14242699|gb|BG840414.2|BG840414 MEST12-C07.T7-1 ISUM4-TN Zea mays cDNA clone MEST12-C07 5', mRNA sequence Length = 559 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Plus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 179 cctaacatccatccatgacccagcttac 206 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 100 atgcagtagcttgacacttggtt 122 >gi|14243179|gb|BG840823.2|BG840823 MEST12-C07.T3 ISUM4-TN Zea mays cDNA clone MEST12-C07 3', mRNA sequence Length = 559 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 381 cctaacatccatccatgacccagcttac 354 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 460 atgcagtagcttgacacttggtt 438 >gi|30032125|gb|CB833976.1|CB833976 3529_1_86_1_C03.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 538 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 200 cctaacatccatccatgacccagcttac 173 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 279 atgcagtagcttgacacttggtt 257 >gi|32856634|gb|CD996315.1|CD996315 QBC2c12.xg QBC Zea mays cDNA clone QBC2c12, mRNA sequence Length = 513 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Plus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 164 cctaacatccatccatgacccagcttac 191 >gi|37377103|gb|CF625126.1|CF625126 zmrws05_0A20-013-d04.s3 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 652 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 303 cctaacatccatccatgacccagcttac 276 >gi|60345546|gb|DN212519.1|DN212519 MEST941_H09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 729 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 309 cctaacatccatccatgacccagcttac 282 >gi|60350740|gb|DN217713.1|DN217713 MEST1055_B04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 765 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 312 cctaacatccatccatgacccagcttac 285 >gi|60351903|gb|DN218876.1|DN218876 MEST1073_C04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 758 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 357 cctaacatccatccatgacccagcttac 330 >gi|71313349|gb|DR793216.1|DR793216 ZM_BFb0013F24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 696 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 301 cctaacatccatccatgacccagcttac 274 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 380 atgcagtagcttgacacttggtt 358 >gi|71323621|gb|DR798491.1|DR798491 ZM_BFb0021A15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 841 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 251 cctaacatccatccatgacccagcttac 224 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 330 atgcagtagcttgacacttggtt 308 >gi|71332012|gb|DR802903.1|DR802903 ZM_BFb0027F12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 752 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 246 cctaacatccatccatgacccagcttac 219 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 325 atgcagtagcttgacacttggtt 303 >gi|76011522|gb|DT938692.1|DT938692 ZM_BFb0120E07.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 785 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 279 cctaacatccatccatgacccagcttac 252 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 358 atgcagtagcttgacacttggtt 336 >gi|78082578|gb|DV510990.1|DV510990 ZM_BFb0190O23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 486 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 397 cctaacatccatccatgacccagcttac 370 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 477 atgcagtagcttgacacttggtt 455 >gi|88748898|gb|DY533039.1|DY533039 ZM_BFb0263H18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 620 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 364 cctaacatccatccatgacccagcttac 337 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 443 atgcagtagcttgacacttggtt 421 >gi|89247041|gb|DY618827.1|DY618827 ZM_BFb0274P18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 677 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 403 cctaacatccatccatgacccagcttac 376 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 482 atgcagtagcttgacacttggtt 460 >gi|54653905|gb|BT019124.1| Zea mays clone Contig738.F mRNA sequence Length = 931 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 321 cctaacatccatccatgacccagcttac 294 >gi|47098543|gb|BV149086.1| PZA01934-74176-W22_R-scm2 Zea mays W22_R-scm2 Zea mays STS genomic, sequence tagged site Length = 429 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 154 cctaacatccatccatgacccagcttac 127 >gi|47098542|gb|BV149085.1| PZA01934-74164-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 439 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 161 cctaacatccatccatgacccagcttac 134 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 240 atgcagtagcttgacacttggtt 218 >gi|47098541|gb|BV149084.1| PZA01934-74174-Tx303 Zea mays Tx303 Zea mays STS genomic, sequence tagged site Length = 441 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 167 cctaacatccatccatgacccagcttac 140 >gi|47098540|gb|BV149083.1| PZA01934-74173-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 442 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 161 cctaacatccatccatgacccagcttac 134 >gi|47098539|gb|BV149082.1| PZA01934-74175-NC7A Zea mays NC7A Zea mays STS genomic, sequence tagged site Length = 435 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 156 cctaacatccatccatgacccagcttac 129 >gi|47098538|gb|BV149081.1| PZA01934-74163-Mp708 Zea mays Mp708 Zea mays STS genomic, sequence tagged site Length = 452 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 159 cctaacatccatccatgacccagcttac 132 >gi|47098537|gb|BV149080.1| PZA01934-74172-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 455 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 163 cctaacatccatccatgacccagcttac 136 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 242 atgcagtagcttgacacttggtt 220 >gi|47098536|gb|BV149079.1| PZA01934-74177-ILO Zea mays ILO Zea mays STS genomic, sequence tagged site Length = 438 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 161 cctaacatccatccatgacccagcttac 134 >gi|47098535|gb|BV149078.1| PZA01934-74165-IHO Zea mays IHO Zea mays STS genomic, sequence tagged site Length = 454 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 161 cctaacatccatccatgacccagcttac 134 >gi|47098534|gb|BV149077.1| PZA01934-74161-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 457 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 164 cctaacatccatccatgacccagcttac 137 >gi|47098533|gb|BV149076.1| PZA01934-74162-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 441 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 159 cctaacatccatccatgacccagcttac 132 >gi|47098532|gb|BV149075.1| PZA01934-74160-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 457 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 163 cctaacatccatccatgacccagcttac 136 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 415 atgcagtagcttcacacttggtt 437 |||||||||||| |||||||||| Sbjct: 242 atgcagtagcttgacacttggtt 220 >gi|47081659|gb|BV145556.1| PZA02533-77625-Tx303 Zea mays Tx303 Zea mays STS genomic, sequence tagged site Length = 539 Score = 48.1 bits (24), Expect = 0.001 Identities = 39/44 (88%) Strand = Plus / Minus Query: 125 acaacaagttcaccgcagatgctctgcagtctctaacatataac 168 ||||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 539 acaacaacttcactgcagacgcgctgcagtctctcacatataac 496 >gi|54653905|gb|BT019124.1| Zea mays clone Contig738.F mRNA sequence Length = 931 Score = 48.1 bits (24), Expect = 0.001 Identities = 27/28 (96%) Strand = Plus / Minus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| |||||||||||||||||||| Sbjct: 321 cctaacatccatccatgacccagcttac 294 >gi|7135175|gb|AW497968.1|AW497968 660042B11.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 651 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 ||||||||||| ||||| || || |||||| |||||| ||||||| | |||||| || Sbjct: 195 atctgccaccctacagagttcgacttcttcctgtgcagccatgctggcatcaagggcacc 254 Query: 91 agccgtcctacgcattaccatgt 113 ||||||||| | || |||||||| Sbjct: 255 agccgtcctgctcactaccatgt 277 >gi|8665786|gb|BE186602.1|BE186602 946009B03.X1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 595 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 493 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 434 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 433 agccgccctgcccattaccatgt 411 >gi|9028756|gb|BE238796.1|BE238796 946009B03.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 567 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 93 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 152 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 153 agccgccctgcccattaccatgt 175 >gi|9743049|gb|BE519197.1|BE519197 946094E04.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 588 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 491 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 432 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 431 agccgccctgcccattaccatgt 409 >gi|21809572|gb|BQ667890.1|BQ667890 946101G12.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 555 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 494 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 435 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 434 agccgccctgcccattaccatgt 412 >gi|24769343|gb|CA404472.1|CA404472 EL01N0518E10.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 642 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 579 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 520 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 519 agccgccctgcccattaccatgt 497 >gi|30087020|gb|CB885228.1|CB885228 3529_1_82_1_F10.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 606 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 456 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 397 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 396 agccgccctgcccattaccatgt 374 >gi|30706012|gb|CD059000.1|CD059000 3529_1_107_1_A02.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 588 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 424 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 365 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 364 agccgccctgcccattaccatgt 342 >gi|31354534|gb|CD438891.1|CD438891 EL01N0518E10.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 894 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 367 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 426 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 427 agccgccctgcccattaccatgt 449 >gi|31354864|gb|CD439221.1|CD439221 EL01N0522D01.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 774 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 673 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 614 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 613 agccgccctgcccattaccatgt 591 >gi|32838366|gb|CD978044.1|CD978044 QAF38a12.yg QAF Zea mays cDNA clone QAF38a12, mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 460 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 401 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 400 agccgccctgcccattaccatgt 378 >gi|32868324|gb|CF008006.1|CF008006 QBI6f06.pg QBI Zea mays cDNA clone QBI6f06, mRNA sequence Length = 577 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 515 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 456 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 455 agccgccctgcccattaccatgt 433 >gi|34391259|gb|CF384487.1|CF384487 EST3335 Zea mays sperm cell cDNA library Zea mays cDNA clone Zmsp8423 5', mRNA sequence Length = 834 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 310 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 369 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 370 agccgccctgcccattaccatgt 392 >gi|60340881|gb|DN207854.1|DN207854 MEST861_B03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 687 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 552 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 493 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 492 agccgccctgcccattaccatgt 470 >gi|60341934|gb|DN208907.1|DN208907 MEST877_F05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 737 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 521 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 462 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 461 agccgccctgcccattaccatgt 439 >gi|60342221|gb|DN209194.1|DN209194 MEST882_G01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 731 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 629 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 570 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 569 agccgccctgcccattaccatgt 547 >gi|67015965|gb|CO444714.1|CO444714 MZCCL10075C06.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 828 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 302 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 361 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 362 agccgccctgcccattaccatgt 384 >gi|67023118|gb|CO451867.1|CO451867 MZCCL10169C08.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 905 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 278 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 337 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 338 agccgccctgcccattaccatgt 360 >gi|76923262|gb|DV169399.1|DV169399 ZM_BFb0168H16.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 651 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 523 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 464 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 463 agccgccctgcccattaccatgt 441 >gi|87155703|gb|DY400492.1|DY400492 V-946-1B-C11.T7-1 UGV-Reseq Zea mays cDNA, mRNA sequence Length = 667 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 517 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 458 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 457 agccgccctgcccattaccatgt 435 >gi|54651555|gb|BT016774.1| Zea mays clone Contig607 mRNA sequence Length = 1039 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 673 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 614 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 613 agccgccctgcccattaccatgt 591 >gi|21214247|gb|AY110134.1| Zea mays CL909_1 mRNA sequence Length = 2635 Score = 46.1 bits (23), Expect = 0.004 Identities = 44/51 (86%) Strand = Plus / Plus Query: 10 ggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 60 ||||| || ||||||| | | ||||| |||||| ||||||||||||||||| Sbjct: 2040 ggcacagtggttgatagtgagatctgtcacccagcagaatttgatttcttc 2090 >gi|21215574|gb|AY110984.1| Zea mays CL857_3 mRNA sequence Length = 2419 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 1898 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 1957 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 1958 agccgccctgcccattaccatgt 1980 >gi|54651555|gb|BT016774.1| Zea mays clone Contig607 mRNA sequence Length = 1039 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Minus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 673 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 614 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 613 agccgccctgcccattaccatgt 591 >gi|21215574|gb|AY110984.1| Zea mays CL857_3 mRNA sequence Length = 2419 Score = 46.1 bits (23), Expect = 0.004 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 atctgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaaca 90 |||||||| ||||| || |||||||||| | |||||| ||||||| | |||||||| Sbjct: 1898 atctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagggaaca 1957 Query: 91 agccgtcctacgcattaccatgt 113 ||||| ||| | ||||||||||| Sbjct: 1958 agccgccctgcccattaccatgt 1980 >gi|21214247|gb|AY110134.1| Zea mays CL909_1 mRNA sequence Length = 2635 Score = 46.1 bits (23), Expect = 0.004 Identities = 44/51 (86%) Strand = Plus / Plus Query: 10 ggcaccgtagttgataataatatctgccacccaacagaatttgatttcttc 60 ||||| || ||||||| | | ||||| |||||| ||||||||||||||||| Sbjct: 2040 ggcacagtggttgatagtgagatctgtcacccagcagaatttgatttcttc 2090 >gi|9566493|gb|BE476002.1|BE476002 946050G06.y2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 547 Score = 42.1 bits (21), Expect = 0.069 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttct 58 |||||||||||||| |||||||||| Sbjct: 490 tgccacccaacagagtttgatttct 514 >gi|19351412|gb|BM895959.1|BM895959 952071B10.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 297 Score = 42.1 bits (21), Expect = 0.069 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttct 58 |||||||||||||| |||||||||| Sbjct: 275 tgccacccaacagagtttgatttct 251 >gi|20301316|gb|BQ164259.1|BQ164259 1091018B11.y4 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 547 Score = 42.1 bits (21), Expect = 0.069 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttct 58 |||||||||||||| |||||||||| Sbjct: 519 tgccacccaacagagtttgatttct 543 >gi|22491107|gb|BU051030.1|BU051030 1111037E12.y2 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 637 Score = 42.1 bits (21), Expect = 0.069 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttct 58 |||||||||||||| |||||||||| Sbjct: 459 tgccacccaacagagtttgatttct 435 >gi|87152377|gb|DY397166.1|DY397166 III-952-10A-E12.M13-R UGIII-Reseq Zea mays cDNA, mRNA sequence Length = 681 Score = 42.1 bits (21), Expect = 0.069 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttct 58 |||||||||||||| |||||||||| Sbjct: 448 tgccacccaacagagtttgatttct 424 >gi|7145150|gb|AW506631.1|AW506631 660058B12.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 492 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 269 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 328 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 329 cgtcctgcccattatcatgt 348 >gi|21759928|gb|BQ635469.1|BQ635469 1091071A05.x1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 295 Score = 40.1 bits (20), Expect = 0.27 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggttttgaccttggtaacga 363 |||||||||||||||||||| Sbjct: 67 ggttttgaccttggtaacga 48 >gi|23199824|gb|BU582389.1|BU582389 946188H03.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 644 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 267 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 326 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 327 atgagctgcagactct 342 >gi|26560087|gb|CA832322.1|CA832322 1117031D04.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 610 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 294 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 353 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 354 atgagctgcagactct 369 >gi|31357175|gb|CD441532.1|CD441532 EL01N0558H07.g Endosperm_5 Zea mays cDNA, mRNA sequence Length = 685 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 597 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 538 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 537 cgtcctgcccattatcatgt 518 >gi|31359016|gb|CD443373.1|CD443373 EL01N0425E02.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 639 Score = 40.1 bits (20), Expect = 0.27 Identities = 26/28 (92%) Strand = Plus / Plus Query: 485 cctaacacccatccatgacccagcttac 512 ||||||| ||||||||||||||||||| Sbjct: 609 cctaacatgcatccatgacccagcttac 636 >gi|32857278|gb|CD996959.1|CD996959 QBD1h07.xg QBD Zea mays cDNA clone QBD1h07, mRNA sequence Length = 605 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 76 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 135 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 136 atgagctgcagactct 151 >gi|32915205|gb|CF020017.1|CF020017 QBN25e02.xg QBN Zea mays cDNA clone QBN25e02, mRNA sequence Length = 509 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 21 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 80 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 81 cgtcctgcccattatcatgt 100 >gi|32943230|gb|CF048049.1|CF048049 QCL17a06.yg QCL Zea mays cDNA clone QCL17a06, mRNA sequence Length = 640 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 458 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 399 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 398 cgtcctgcccattatcatgt 379 >gi|33092953|gb|CF052947.1|CF052947 QCN10b12.yg QCN Zea mays cDNA clone QCN10b12, mRNA sequence Length = 670 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 183 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 242 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 243 cgtcctgcccattatcatgt 262 >gi|37381897|gb|CF627855.1|CF627855 zmrws05_0B20-016-a05.s3 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 685 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 533 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 474 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 473 cgtcctgcccattatcatgt 454 >gi|37383072|gb|CF628514.1|CF628514 zmrws48_0A10-006-g02.s4 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 693 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 620 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 561 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 560 atgagctgcagactct 545 >gi|37391421|gb|CF632953.1|CF632953 zmrws48_0B20-009-h03.s3 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 658 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 598 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 539 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 538 atgagctgcagactct 523 >gi|50339454|gb|CO534580.1|CO534580 3530_1_228_1_F06.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 635 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 255 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 314 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 315 atgagctgcagactct 330 >gi|60336831|gb|DN203804.1|DN203804 MEST902_G09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 745 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 573 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 514 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 513 cgtcctgcccattatcatgt 494 >gi|60338062|gb|DN205035.1|DN205035 MEST813_E04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 646 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 194 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 253 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 254 cgtcctgcccattatcatgt 273 >gi|60343591|gb|DN210564.1|DN210564 MEST911_E11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 751 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 268 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 327 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 328 cgtcctgcccattatcatgt 347 >gi|60351687|gb|DN218660.1|DN218660 MEST1070_C04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 770 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 573 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 514 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 513 cgtcctgcccattatcatgt 494 >gi|60352410|gb|DN219383.1|DN219383 MEST1080_E09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 692 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 353 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 412 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 413 cgtcctgcccattatcatgt 432 >gi|60354870|gb|DN221843.1|DN221843 MEST1120_F07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 719 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 569 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 510 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 509 cgtcctgcccattatcatgt 490 >gi|60355594|gb|DN222567.1|DN222567 MEST1130_F01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 282 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 226 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 167 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 166 atgagctgcagactct 151 >gi|60356496|gb|DN223469.1|DN223469 MEST1143_H03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 599 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 540 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 539 atgagctgcagactct 524 >gi|60356862|gb|DN223835.1|DN223835 MEST1148_H08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 727 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 612 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 553 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 552 atgagctgcagactct 537 >gi|60356866|gb|DN223839.1|DN223839 MEST1148_G09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 694 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 572 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 513 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 512 atgagctgcagactct 497 >gi|60357517|gb|DN224490.1|DN224490 MEST1159_C08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 764 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 610 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 551 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 550 atgagctgcagactct 535 >gi|60358171|gb|DN225144.1|DN225144 MEST1170_D06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 711 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 589 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 530 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 529 atgagctgcagactct 514 >gi|60394829|gb|DN227698.1|DN227698 MEST1209_D05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 731 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 194 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 253 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 254 cgtcctgcccattatcatgt 273 >gi|60396453|gb|DN229322.1|DN229322 MEST1013_C12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 735 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 694 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 635 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 634 atgagctgcagactct 619 >gi|60397378|gb|DN230194.1|DN230194 MEST1023_G05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 677 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 602 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 543 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 542 atgagctgcagactct 527 >gi|60398461|gb|DN231277.1|DN231277 MEST1147_A05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 762 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 607 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 548 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 547 atgagctgcagactct 532 >gi|60398637|gb|DN231453.1|DN231453 MEST1173_A06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 723 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 575 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 516 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 515 atgagctgcagactct 500 >gi|60398770|gb|DN231586.1|DN231586 MEST1124_A07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 737 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 355 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 414 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 415 cgtcctgcccattatcatgt 434 >gi|60399274|gb|DN232088.1|DN232088 MEST1119_A10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 746 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Minus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 594 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 535 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 534 cgtcctgcccattatcatgt 515 >gi|61119115|gb|DN560076.1|DN560076 ME21-C03-T3-96-R1 E7PCR Zea mays cDNA clone E7PCRME2103C, mRNA sequence Length = 821 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 566 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 625 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 626 atgagctgcagactct 641 >gi|67013647|gb|CO442396.1|CO442396 MZCCL10046A06.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 840 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 523 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 582 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 583 cgtcctgcccattatcatgt 602 >gi|71432314|gb|DR813364.1|DR813364 ZM_BFb0042H24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 760 Score = 40.1 bits (20), Expect = 0.27 Identities = 65/80 (81%) Strand = Plus / Plus Query: 34 tgccacccaacagaatttgatttcttcgtgtgcatccatgctagggccaagggaacaagc 93 ||||| ||||| || |||||||||| | |||||| ||||||| | ||||||||||| Sbjct: 606 tgccatccaaccgagtttgatttctacctgtgcagccatgctggcattcagggaacaagc 665 Query: 94 cgtcctacgcattaccatgt 113 |||||| | ||||| ||||| Sbjct: 666 cgtcctgcccattatcatgt 685 >gi|78024809|gb|DV493196.1|DV493196 1000220-D09.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 608 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 603 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 544 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 543 atgagctgcagactct 528 >gi|86468607|gb|DY234977.1|DY234977 ZM_BFb0245H07.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 666 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 606 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 547 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 546 atgagctgcagactct 531 >gi|87155535|gb|DY400324.1|DY400324 V-946-1B-D08.T7-1 UGV-Reseq Zea mays cDNA, mRNA sequence Length = 618 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 601 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 542 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 541 atgagctgcagactct 526 >gi|87157390|gb|DY402179.1|DY402179 V-946-8D-D04.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 750 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 309 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 368 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 369 atgagctgcagactct 384 >gi|91053920|gb|EB164338.1|EB164338 ZM_BFb0324F08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 711 Score = 40.1 bits (20), Expect = 0.27 Identities = 62/76 (81%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcaccgcag 142 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| || | Sbjct: 569 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcacagctg 510 Query: 143 atgctctgcagtctct 158 ||| |||||| |||| Sbjct: 509 atgagctgcagactct 494 >gi|47081657|gb|BV145554.1| PZA02533-77626-NC7A Zea mays NC7A Zea mays STS genomic, sequence tagged site Length = 531 Score = 40.1 bits (20), Expect = 0.27 Identities = 32/36 (88%) Strand = Plus / Minus Query: 133 ttcaccgcagatgctctgcagtctctaacatataac 168 ||||| ||||| || ||||||||||| ||||||||| Sbjct: 530 ttcactgcagacgcgctgcagtctctcacatataac 495 >gi|47081653|gb|BV145550.1| PZA02533-77613-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 539 Score = 40.1 bits (20), Expect = 0.27 Identities = 32/36 (88%) Strand = Plus / Minus Query: 133 ttcaccgcagatgctctgcagtctctaacatataac 168 ||||| ||||| || ||||||||||| ||||||||| Sbjct: 539 ttcactgcagacgcgctgcagtctctcacatataac 504 >gi|90568308|gb|AC183954.1| Zea mays chromosome UNK clone ZMMBBb-380N10; ZMMBBb0380N10, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 112389 Score = 40.1 bits (20), Expect = 0.27 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gcagatgcagacatgcagta 422 |||||||||||||||||||| Sbjct: 53550 gcagatgcagacatgcagta 53531 >gi|5525334|gb|AI861173.1|AI861173 603017D02.x1 603 - stressed root cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 570 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 83 agggaacaagccgtcctacgcattaccatgt 113 ||||||||||||| ||| | ||||||||||| Sbjct: 490 agggaacaagccgccctgcccattaccatgt 520 >gi|21843460|gb|BQ704041.1|BQ704041 946109F10.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 493 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgt 113 ||||||||||||| ||| | ||||||||||| Sbjct: 454 agggaacaagccgccctgcccattaccatgt 424 >gi|32839124|gb|CD978805.1|CD978805 QAF5c04.yg QAF Zea mays cDNA clone QAF5c04, mRNA sequence Length = 589 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgt 113 ||||||||||||||||| | ||||| ||||| Sbjct: 441 agggaacaagccgtcctgcccattatcatgt 411 >gi|40302785|gb|CK347172.1|CK347172 zmrsub1_0A10-003-f12.s2 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 753 Score = 38.2 bits (19), Expect = 1.1 Identities = 46/55 (83%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcac 137 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| Sbjct: 606 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcac 552 >gi|40303829|gb|CK348216.1|CK348216 zmrsub1_0X10-002-b09.s1 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 775 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgt 113 ||||||||||||||||| | ||||| ||||| Sbjct: 681 agggaacaagccgtcctgcccattatcatgt 651 >gi|71440212|gb|DR821262.1|DR821262 ZM_BFb0060H13.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 707 Score = 38.2 bits (19), Expect = 1.1 Identities = 46/55 (83%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgtgctacgagatgacaacaagttcac 137 ||||||||||||| ||| | ||||||||||| || | || || ||||||||||| Sbjct: 605 agggaacaagccgccctgctcattaccatgtcctgtgggacgagaacaagttcac 551 >gi|84969290|gb|DW467733.1|DW467733 ZM_BFb0110A08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 501 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 83 agggaacaagccgtcctacgcattaccatgt 113 ||||||||||||| ||| | ||||||||||| Sbjct: 471 agggaacaagccgccctgcccattaccatgt 441 >gi|58082321|gb|AC155460.2| Zea mays strain B73 clone ZMMBBb0468O14, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces Length = 152523 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 403 gcagatgcagacatgcagt 421 ||||||||||||||||||| Sbjct: 84418 gcagatgcagacatgcagt 84400 >gi|47081658|gb|BV145555.1| PZA02533-77624-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 540 Score = 36.2 bits (18), Expect = 4.3 Identities = 27/30 (90%) Strand = Plus / Minus Query: 139 gcagatgctctgcagtctctaacatataac 168 ||||| || ||||||||||| ||||||||| Sbjct: 536 gcagacgcgctgcagtctctcacatataac 507 >gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-259G1; ZMMBBc0259G01, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 185847 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 gtagttgataataatatc 33 |||||||||||||||||| Sbjct: 41618 gtagttgataataatatc 41635 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 163,176 Number of Sequences: 836351 Number of extensions: 163176 Number of successful extensions: 11274 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 11042 Number of HSP's gapped (non-prelim): 232 length of query: 527 length of database: 669,372,029 effective HSP length: 19 effective length of query: 508 effective length of database: 653,481,360 effective search space: 331968530880 effective search space used: 331968530880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)