BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3336981.2.1 (510 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|12045693|gb|BF727832.1|BF727832 1000053E08.x2 1000 - Unigene ... 961 0.0 gi|47081394|gb|BV145291.1| PZA02509-77232-B73 Zea mays B73 Zea m... 569 e-160 gi|47081402|gb|BV145299.1| PZA02509-77248-W22_R-scm2 Zea mays W2... 563 e-159 gi|47081399|gb|BV145296.1| PZA02509-77235-Mp708 Zea mays Mp708 Z... 555 e-156 gi|47081396|gb|BV145293.1| PZA02509-77233-GT119 Zea mays GT119 Z... 551 e-155 gi|47081395|gb|BV145292.1| PZA02509-77234-CO159 Zea mays CO159 Z... 547 e-154 gi|47081400|gb|BV145297.1| PZA02509-77247-NC7A Zea mays NC7A Zea... 545 e-153 gi|47081398|gb|BV145295.1| PZA02509-77249-Mo17 Zea mays Mo17 Zea... 541 e-152 gi|47081401|gb|BV145298.1| PZA02509-77245-T218 Zea mays T218 Zea... 535 e-150 gi|78180194|gb|DV550567.1|DV550567 1000053-E08.GAD10-F UGI-Reseq... 513 e-144 gi|6195012|gb|AW147116.1|AW147116 707013E02.x1 707 - Mixed adult... 507 e-142 gi|47081397|gb|BV145294.1| PZA02509-77244-Mo17 Zea mays Mo17 Zea... 502 e-140 gi|88753327|gb|DY537468.1|DY537468 ZM_BFb0273E04.r ZM_BFb Zea ma... 202 3e-50 gi|88753326|gb|DY537467.1|DY537467 ZM_BFb0273E04.f ZM_BFb Zea ma... 184 7e-45 gi|86472216|gb|DY238586.1|DY238586 ZM_BFb0256I09.r ZM_BFb Zea ma... 84 2e-14 gi|67034470|gb|CO463020.1|CO463020 MZCCS20029A03.g Maize Endospe... 56 4e-06 gi|71421482|gb|DR805452.1|DR805452 ZM_BFb0030P09.r ZM_BFb Zea ma... 56 4e-06 gi|74243695|gb|DT651609.1|DT651609 ZM_BFb0115M18.r ZM_BFb Zea ma... 56 4e-06 gi|50330461|gb|CO525587.1|CO525587 3530_1_170_1_A09.y_1 3530 - F... 40 0.26 gi|71446469|gb|DR827519.1|DR827519 ZM_BFb0070M12.r ZM_BFb Zea ma... 40 0.26 gi|76286666|gb|DV026234.1|DV026234 ZM_BFb0147C24.r ZM_BFb Zea ma... 40 0.26 gi|78119217|gb|DV537601.1|DV537601 ZM_BFb0230J21.r ZM_BFb Zea ma... 40 0.26 gi|86468220|gb|DY234590.1|DY234590 ZM_BFb0244M20.r ZM_BFb Zea ma... 40 0.26 gi|89761009|gb|DY689193.1|DY689193 ZM_BFb0284L24.r ZM_BFb Zea ma... 40 0.26 gi|93016691|gb|EB642211.1|EB642211 ZM_BFb0332G13.r ZM_BFb Zea ma... 40 0.26 gi|24767941|gb|CA403076.1|CA403076 EL01N0446F08.g Endosperm_4 Ze... 38 1.0 gi|91982832|gb|AC185287.1| Zea mays chromosome UNK clone CH201-1... 38 1.0 gi|89179595|gb|AC183437.1| Zea mays chromosome UNK clone CH201-3... 38 1.0 gi|85861424|gb|AC177914.1| Zea mays chromosome UNK clone CH201-1... 38 1.0 gi|4827507|gb|AI668199.1|AI668199 605018B04.x1 605 - Endosperm c... 36 4.1 gi|4834953|gb|AI670179.1|AI670179 605019D11.x2 605 - Endosperm c... 36 4.1 gi|5124488|gb|AI746224.1|AI746224 605083A06.x1 605 - Endosperm c... 36 4.1 gi|8401201|gb|BE056835.1|BE056835 945033C04.Y1 945 - Mixed adult... 36 4.1 gi|8401215|gb|BE056849.1|BE056849 945033F01.Y1 945 - Mixed adult... 36 4.1 gi|8577314|gb|BE129951.1|BE129951 945033F01.X1 945 - Mixed adult... 36 4.1 gi|9255070|gb|BE345538.1|BE345538 946035F05.x1 946 - tassel prim... 36 4.1 gi|9461302|gb|BE453665.1|BE453665 946049E08.y1 946 - tassel prim... 36 4.1 gi|9462043|gb|BE454032.1|BE454032 946049E08.x1 946 - tassel prim... 36 4.1 gi|9566391|gb|BE475900.1|BE475900 946049E08.x2 946 - tassel prim... 36 4.1 gi|9566392|gb|BE475901.1|BE475901 946049E08.y2 946 - tassel prim... 36 4.1 gi|13150118|gb|BG320440.1|BG320440 Zm03_10b11_A Zm03_AAFC_ECORC_... 36 4.1 gi|21391164|gb|BQ529213.1|BQ529213 1091056A11.x1 1091 - Immature... 36 4.1 gi|21625953|gb|BQ620874.1|BQ620874 1091061A08.x1 1091 - Immature... 36 4.1 gi|22472215|gb|BU036695.1|BU036695 946128H10.y1 946 - tassel pri... 36 4.1 gi|22472406|gb|BU036886.1|BU036886 946130E06.y1 946 - tassel pri... 36 4.1 gi|22541986|gb|BU092424.1|BU092424 946130E06.x2 946 - tassel pri... 36 4.1 gi|22545901|gb|BU098260.1|BU098260 946133D08.y1 946 - tassel pri... 36 4.1 gi|26457264|gb|CA828847.1|CA828847 1114034B09.y2 1114 - Unigene ... 36 4.1 gi|26457273|gb|CA828856.1|CA828856 1114034C06.y2 1114 - Unigene ... 36 4.1 gi|26457279|gb|CA828862.1|CA828862 1114034C12.y2 1114 - Unigene ... 36 4.1 gi|32805416|gb|CD957652.1|CD957652 SCK_212 GeneTag2 Zea mays cDN... 36 4.1 gi|32845759|gb|CD985440.1|CD985440 QAN10a07.yg QAN Zea mays cDNA... 36 4.1 gi|32855896|gb|CD995577.1|CD995577 QBB26e12.xg QBB Zea mays cDNA... 36 4.1 gi|32855903|gb|CD995584.1|CD995584 QBB26f07.xg QBB Zea mays cDNA... 36 4.1 gi|32859856|gb|CD999537.1|CD999537 QBF6h05.pg QBF Zea mays cDNA ... 36 4.1 gi|32859857|gb|CD999538.1|CD999538 QBF6h05.xg QBF Zea mays cDNA ... 36 4.1 gi|32862199|gb|CF001881.1|CF001881 QBG7b09.pg QBG Zea mays cDNA ... 36 4.1 gi|32862200|gb|CF001882.1|CF001882 QBG7b09.xg QBG Zea mays cDNA ... 36 4.1 gi|32868517|gb|CF008199.1|CF008199 QBI8b11.pg QBI Zea mays cDNA ... 36 4.1 gi|32868518|gb|CF008200.1|CF008200 QBI8b11.xg QBI Zea mays cDNA ... 36 4.1 gi|32912671|gb|CF017483.1|CF017483 QBM24f08.xg QBM Zea mays cDNA... 36 4.1 gi|32914557|gb|CF019369.1|CF019369 QBN18f07.xg QBN Zea mays cDNA... 36 4.1 gi|32928670|gb|CF033482.1|CF033482 QCF17c04.yg QCF Zea mays cDNA... 36 4.1 gi|32928750|gb|CF033562.1|CF033562 QCF18c07.yg QCF Zea mays cDNA... 36 4.1 gi|32928799|gb|CF033611.1|CF033611 QCF18h02.yg QCF Zea mays cDNA... 36 4.1 gi|32937740|gb|CF042559.1|CF042559 QCI4g03.yg QCI Zea mays cDNA ... 36 4.1 gi|33770813|gb|CF273107.1|CF273107 EST2669 Zea mays sperm cell c... 36 4.1 gi|60347688|gb|DN214661.1|DN214661 MEST863_F10.T7-1 UGA-ZmSAM-XZ... 36 4.1 gi|60352330|gb|DN219303.1|DN219303 MEST1079_G07.T7-1 UGA-ZmSAM-X... 36 4.1 gi|60352585|gb|DN219558.1|DN219558 MEST1083_H04.T7-1 UGA-ZmSAM-X... 36 4.1 gi|60399167|gb|DN231981.1|DN231981 MEST1186_A09.T7-1 UGA-ZmSAM-X... 36 4.1 gi|71298449|gb|DR785204.1|DR785204 ZM_BFb0001K08.f ZM_BFb Zea ma... 36 4.1 gi|71298450|gb|DR785205.1|DR785205 ZM_BFb0001K08.r ZM_BFb Zea ma... 36 4.1 gi|71774801|gb|DR972679.1|DR972679 ZM_BFb0095P06.f ZM_BFb Zea ma... 36 4.1 gi|78025481|gb|DV493868.1|DV493868 1000104-E07.T7-1 UGI-Reseq Ze... 36 4.1 gi|78544679|gb|DV622177.1|DV622177 IV-1091-406B-C06.T7-1 UGIV-10... 36 4.1 gi|84977618|gb|DW476040.1|DW476040 1124 Zea mays central cell cD... 36 4.1 gi|21207520|gb|AY104442.1| Zea mays PCO096884 mRNA sequence 36 4.1 gi|21207520|gb|AY104442.1| Zea mays PCO096884 mRNA sequence 36 4.1 gi|92110182|gb|AC185319.1| Zea mays chromosome UNK clone CH201-2... 36 4.1 gi|91065018|gb|AC184794.1| Zea mays chromosome UNK clone CH201-1... 36 4.1 gi|89941530|gb|AC183785.1| Zea mays chromosome UNK clone CH201-1... 36 4.1 gi|85861385|gb|AC177875.1| Zea mays chromosome UNK clone ZMMBBb-... 36 4.1 gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-2... 36 4.1 >gi|12045693|gb|BF727832.1|BF727832 1000053E08.x2 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 493 Score = 961 bits (485), Expect = 0.0 Identities = 491/493 (99%) Strand = Plus / Plus Query: 1 gtagggtactactggatgcgtctggccatctacatgggcattggcgtgtgcctaggcact 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtagggtactactggatgcgtctggccatctacatgggcattggcgtgtgcctaggcact 60 Query: 61 atcttctaccaacttggctacagcacctacagctctatccagagtcgatgtgaagtaatc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atcttctaccaacttggctacagcacctacagctctatccagagtcgatgtgaagtaatc 120 Query: 121 atgtacactatcgcactcctaactttcatgtctatcggaggatttccatccttcgtagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atgtacactatcgcactcctaactttcatgtctatcggaggatttccatccttcgtagaa 180 Query: 181 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 240 Query: 241 atctccaacaccatctccgccactccatacctggccggcgtttccctactgcccggcgcg 300 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 241 atctccaacaccatctccgccactccatacctgtccgtcgtttccctactgcccggcgcg 300 Query: 301 atgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatg 360 Query: 361 gtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtc 420 Query: 421 ccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgatgctcaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgatgctcaac 480 Query: 481 ggcggcttcttcc 493 ||||||||||||| Sbjct: 481 ggcggcttcttcc 493 >gi|47081394|gb|BV145291.1| PZA02509-77232-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 318 Score = 569 bits (287), Expect = e-160 Identities = 299/303 (98%) Strand = Plus / Plus Query: 173 tcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcgg 232 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 tcgtagaagacgtccaggtgttcagaaaggagaggctgagcggccactacggcgtgtcgg 68 Query: 233 agttcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctactgc 292 |||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| Sbjct: 69 agttcgtcatctccaacaccatctccgccactccgtacctgtccgtcgtttccctactgc 128 Query: 293 ccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctact 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctact 188 Query: 353 tcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccg 248 Query: 413 ccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatga 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatga 308 Query: 473 tgc 475 ||| Sbjct: 309 tgc 311 >gi|47081402|gb|BV145299.1| PZA02509-77248-W22_R-scm2 Zea mays W22_R-scm2 Zea mays STS genomic, sequence tagged site Length = 308 Score = 563 bits (284), Expect = e-159 Identities = 301/308 (97%) Strand = Plus / Plus Query: 175 gtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggag 234 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 gtagaagacgtcaaggtgttcagaaaggagaggctgagcggccantacggcgtgtcggag 60 Query: 235 ttcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctactgccc 294 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 61 ttcgtcatctccaacaccatctccgccactccatacctgtccgtcgtttccctactgccc 120 Query: 295 ggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttc 180 Query: 355 gtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgcc 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgcc 240 Query: 415 gtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgatg 474 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 241 gtcgtcccggacttcctgatggggatcatcgtcngcgccggggtgcaaggtgtcatgatg 300 Query: 475 ctcaacgg 482 | ||||| Sbjct: 301 cnnaacgg 308 >gi|47081399|gb|BV145296.1| PZA02509-77235-Mp708 Zea mays Mp708 Zea mays STS genomic, sequence tagged site Length = 308 Score = 555 bits (280), Expect = e-156 Identities = 295/300 (98%) Strand = Plus / Plus Query: 173 tcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcgg 232 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9 tcgtagaagacgtcaaggtgttcagaaaggagagggtgagcggccactacggcgtgtcgg 68 Query: 233 agttcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctactgc 292 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 69 agttcgtcatctccaacaccatctccgccactccatacctgtccgtcgtttccctactgc 128 Query: 293 ccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctact 352 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 129 ccggcgcgatgctgtactacctcacgggcctatccaaaggcgccgaccacttcgtctact 188 Query: 353 tcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccg 248 Query: 413 ccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatga 472 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 249 ccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcaaggtgtcatga 308 >gi|47081396|gb|BV145293.1| PZA02509-77233-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 307 Score = 551 bits (278), Expect = e-155 Identities = 296/302 (98%) Strand = Plus / Plus Query: 170 ccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgt 229 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 6 ccttcctagaagacgtcaaggtgttcagaaaggagaggctgagcggtcactacggcgtgt 65 Query: 230 cggagttcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctac 289 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 66 cggagttcgtcatctccaacaccatctccgccactccatacctgtccgtcgtttccctac 125 Query: 290 tgcccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtct 349 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tgcccggcgccatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtct 185 Query: 350 acttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 acttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcg 245 Query: 410 ccgccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtca 469 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 246 ccgccgtcgtcccggacttcctgatggggatcatcgtcggggccggggtgcagggtgtca 305 Query: 470 tg 471 || Sbjct: 306 tg 307 >gi|47081395|gb|BV145292.1| PZA02509-77234-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 308 Score = 547 bits (276), Expect = e-154 Identities = 297/304 (97%) Strand = Plus / Plus Query: 169 tccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 tccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtg 64 Query: 229 tcggagttcgtcatctccaacaccatctccgccactccatacctggccggcgtttcccta 288 |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 65 tcggagttcgtcatctccaacaccgtctccgccactccatacctgtccgtcgtttcccta 124 Query: 289 ctgcccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtc 348 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 125 ctgcccggcgccatgctgtactacctcacgggcctatccaaaggcgccgaccacttcgtc 184 Query: 349 tacttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tacttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatc 244 Query: 409 gccgccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtc 468 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 245 gccgccgtcgtcccggacttcctgatggggatcatcgtcgggtccggggtgcagggtgtc 304 Query: 469 atga 472 |||| Sbjct: 305 atga 308 >gi|47081400|gb|BV145297.1| PZA02509-77247-NC7A Zea mays NC7A Zea mays STS genomic, sequence tagged site Length = 295 Score = 545 bits (275), Expect = e-153 Identities = 290/295 (98%) Strand = Plus / Plus Query: 176 tagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagt 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagt 60 Query: 236 tcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctactgcccg 295 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 61 tcgtcatctccaacaccatctccgccactccgtacctgtccgtcgtttccctactgcccg 120 Query: 296 gcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcg 180 Query: 356 tcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccg 240 Query: 416 tcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcat 470 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 241 tcgtcccggacttcctcatggggatcatcgtcggggccggggtgcagggtgtcat 295 >gi|47081398|gb|BV145295.1| PZA02509-77249-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 302 Score = 541 bits (273), Expect = e-152 Identities = 288/293 (98%) Strand = Plus / Plus Query: 181 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 60 Query: 241 atctccaacaccatctccgccactccatacctggccggcgtttccctactgcccggcgcg 300 |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 61 atctccaacaccatctccgccactccgtacctgtccgtcgtttccctactgcccggcgcc 120 Query: 301 atgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatg 180 Query: 361 gtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtc 240 Query: 421 ccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgat 473 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ccggacttcctgatggggatcatcgtcggggccggggtgcagggtgtcatgat 293 >gi|47081401|gb|BV145298.1| PZA02509-77245-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 308 Score = 535 bits (270), Expect = e-150 Identities = 294/302 (97%) Strand = Plus / Plus Query: 169 tccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 tccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtg 66 Query: 229 tcggagttcgtcatctccaacaccatctccgccactccatacctggccggcgtttcccta 288 |||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| Sbjct: 67 tcggagttcgtcatctccaacaccatctccgccactccgtacctgtccgtcgtttcccta 126 Query: 289 ctgcccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtc 348 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ctgcccggcgccatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtc 186 Query: 349 tacttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tacttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatc 246 Query: 409 gccgccgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtc 468 ||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 247 gccgcggtcgtccccgacttcctcatggggatcatcgtcggggccggggtgcagggtgtc 306 Query: 469 at 470 || Sbjct: 307 at 308 >gi|78180194|gb|DV550567.1|DV550567 1000053-E08.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 287 Score = 513 bits (259), Expect = e-144 Identities = 266/267 (99%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 1 gtagggtactactggatgcgtctggccatctacatgggcattggcgtgtgcctaggcact 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 gtagggtactactggatgcgtctggccatctacatgggcattggcgtgtgcctaggcact 81 Query: 61 atcttctaccaacttggctacagcacctacagctctatccagagtcgatgtgaagtaatc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 atcttctaccaacttggctacagcacctacagctctatccagagtcgatgtgaagtaatc 141 Query: 121 atgtacactatcgcactcctaactttcatgtctatcggaggatttccatccttcgtagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 atgtacactatcgcactcctaactttcatgtctatcggaggatttccatccttcgtagaa 201 Query: 181 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgtcggagttcgtc 261 Query: 241 atctccaacaccatctccgccactcca 267 |||| |||||||||||||||||||||| Sbjct: 262 atct-caacaccatctccgccactcca 287 >gi|6195012|gb|AW147116.1|AW147116 707013E02.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 260 Score = 507 bits (256), Expect = e-142 Identities = 259/260 (99%) Strand = Plus / Plus Query: 251 ccatctccgccactccatacctggccggcgtttccctactgcccggcgcgatgctgtact 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccatctccgccactccatacctggccggcgtttccctactgcccggcgcgatgctgtact 60 Query: 311 acctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatggtgctctgcg 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acctcacgggcctgtccaaaggcgccgaccacttcgtctacttcgtcatggtgctctgcg 120 Query: 371 tctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtcccggacttcc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctgctgcctcctggtcgagagcatgatgatggtcatcgccgccgtcgtcccggacttcc 180 Query: 431 tgatggggatcatcgtcggcgccggggtgcagggtgtcatgatgctcaacggcggcttct 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 181 tgatggggatcatcgtcggcgccggggtgcagggtgtcatgatgctcaacggcgggttct 240 Query: 491 tccgcctccccaacgagctg 510 |||||||||||||||||||| Sbjct: 241 tccgcctccccaacgagctg 260 >gi|47081397|gb|BV145294.1| PZA02509-77244-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 282 Score = 502 bits (253), Expect = e-140 Identities = 271/277 (97%) Strand = Plus / Plus Query: 170 ccttcgtagaagacgtcaaggtgttcagaaaggagaggctgagcggccactacggcgtgt 229 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 6 ccttcgtagaagacgtcaaggtgctcagaaaggcgaggctgagcggccactacggcgtgt 65 Query: 230 cggagttcgtcatctccaacaccatctccgccactccatacctggccggcgtttccctac 289 ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| Sbjct: 66 cggagttcgtcatctccaacaccatctccgccactccgtacctgtccgtcgtttccctac 125 Query: 290 tgcccggcgcgatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtct 349 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tgcccggcgccatgctgtactacctcacgggcctgtccaaaggcgccgaccacttcgtct 185 Query: 350 acttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 acttcgtcatggtgctctgcgtctgctgcctcctggtcgagagcatgatgatggtcatcg 245 Query: 410 ccgccgtcgtcccggacttcctgatggggatcatcgt 446 ||||||||||||||||||||||||||||||||||||| Sbjct: 246 ccgccgtcgtcccggacttcctgatggggatcatcgt 282 >gi|88753327|gb|DY537468.1|DY537468 ZM_BFb0273E04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 455 Score = 202 bits (102), Expect = 3e-50 Identities = 105/106 (99%) Strand = Plus / Plus Query: 1 gtagggtactactggatgcgtctggccatctacatgggcattggcgtgtgcctaggcact 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 350 gtagggtactactggatgcgtctggccatctacgtgggcattggcgtgtgcctaggcact 409 Query: 61 atcttctaccaacttggctacagcacctacagctctatccagagtc 106 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 atcttctaccaacttggctacagcacctacagctctatccagagtc 455 >gi|88753326|gb|DY537467.1|DY537467 ZM_BFb0273E04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 572 Score = 184 bits (93), Expect = 7e-45 Identities = 96/97 (98%) Strand = Plus / Minus Query: 414 cgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgat 473 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 572 cgtcgtcccggacttcctgatggggatcatcgtcggcgccggggtgcagggggtcatgat 513 Query: 474 gctcaacggcggcttcttccgcctccccaacgagctg 510 ||||||||||||||||||||||||||||||||||||| Sbjct: 512 gctcaacggcggcttcttccgcctccccaacgagctg 476 >gi|86472216|gb|DY238586.1|DY238586 ZM_BFb0256I09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 576 Score = 83.8 bits (42), Expect = 2e-14 Identities = 69/78 (88%) Strand = Plus / Plus Query: 424 gacttcctgatggggatcatcgtcggcgccggggtgcagggtgtcatgatgctcaacggc 483 |||||||| ||||| |||||| ||||| ||| | ||||| |||||||||||||||||| Sbjct: 453 gacttcctcatgggcatcatcaccggcggcggcatccagggcgtcatgatgctcaacggc 512 Query: 484 ggcttcttccgcctcccc 501 |||||||||||||||||| Sbjct: 513 ggcttcttccgcctcccc 530 Score = 36.2 bits (18), Expect = 4.1 Identities = 24/26 (92%) Strand = Plus / Plus Query: 201 ggagaggctgagcggccactacggcg 226 ||||||||||| ||| |||||||||| Sbjct: 230 ggagaggctgaacgggcactacggcg 255 >gi|67034470|gb|CO463020.1|CO463020 MZCCS20029A03.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 830 Score = 56.0 bits (28), Expect = 4e-06 Identities = 70/84 (83%) Strand = Plus / Plus Query: 145 ttcatgtctatcggaggatttccatccttcgtagaagacgtcaaggtgttcagaaaggag 204 |||||||| |||||||| ||||| || ||||| || ||| | ||||||||| | |||| Sbjct: 74 ttcatgtccatcggagggtttccgtctttcgtggaggacatgaaggtgttccagagggag 133 Query: 205 aggctgagcggccactacggcgtg 228 ||||||| ||| |||||||||||| Sbjct: 134 aggctgaacgggcactacggcgtg 157 >gi|71421482|gb|DR805452.1|DR805452 ZM_BFb0030P09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 749 Score = 56.0 bits (28), Expect = 4e-06 Identities = 70/84 (83%) Strand = Plus / Plus Query: 145 ttcatgtctatcggaggatttccatccttcgtagaagacgtcaaggtgttcagaaaggag 204 |||||||| |||||||| ||||| || ||||| || ||| | ||||||||| | |||| Sbjct: 440 ttcatgtccatcggagggtttccgtctttcgtggaggacatgaaggtgttccagagggag 499 Query: 205 aggctgagcggccactacggcgtg 228 ||||||| ||| |||||||||||| Sbjct: 500 aggctgaacgggcactacggcgtg 523 >gi|74243695|gb|DT651609.1|DT651609 ZM_BFb0115M18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 633 Score = 56.0 bits (28), Expect = 4e-06 Identities = 70/84 (83%) Strand = Plus / Plus Query: 145 ttcatgtctatcggaggatttccatccttcgtagaagacgtcaaggtgttcagaaaggag 204 |||||||| |||||||| ||||| || ||||| || ||| | ||||||||| | |||| Sbjct: 309 ttcatgtccatcggagggtttccgtctttcgtggaggacatgaaggtgttccagagggag 368 Query: 205 aggctgagcggccactacggcgtg 228 ||||||| ||| |||||||||||| Sbjct: 369 aggctgaacgggcactacggcgtg 392 >gi|50330461|gb|CO525587.1|CO525587 3530_1_170_1_A09.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 559 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 307 atcatcgtcggcgccggggt 326 >gi|71446469|gb|DR827519.1|DR827519 ZM_BFb0070M12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 781 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 305 atcatcgtcggcgccggggt 324 >gi|76286666|gb|DV026234.1|DV026234 ZM_BFb0147C24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 755 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 308 atcatcgtcggcgccggggt 327 >gi|78119217|gb|DV537601.1|DV537601 ZM_BFb0230J21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 811 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 312 atcatcgtcggcgccggggt 331 >gi|86468220|gb|DY234590.1|DY234590 ZM_BFb0244M20.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 568 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 296 atcatcgtcggcgccggggt 315 >gi|89761009|gb|DY689193.1|DY689193 ZM_BFb0284L24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 846 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 309 atcatcgtcggcgccggggt 328 >gi|93016691|gb|EB642211.1|EB642211 ZM_BFb0332G13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 758 Score = 40.1 bits (20), Expect = 0.26 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 atcatcgtcggcgccggggt 458 |||||||||||||||||||| Sbjct: 279 atcatcgtcggcgccggggt 298 >gi|24767941|gb|CA403076.1|CA403076 EL01N0446F08.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 680 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 391 agcatgatgatggtcatcg 409 ||||||||||||||||||| Sbjct: 39 agcatgatgatggtcatcg 57 >gi|91982832|gb|AC185287.1| Zea mays chromosome UNK clone CH201-187P8; ZMMBBc0187P08, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 170006 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 328 aaaggcgccgaccacttcg 346 ||||||||||||||||||| Sbjct: 145513 aaaggcgccgaccacttcg 145495 >gi|89179595|gb|AC183437.1| Zea mays chromosome UNK clone CH201-321I24; ZMMBBc0321I24, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 215567 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 328 aaaggcgccgaccacttcg 346 ||||||||||||||||||| Sbjct: 184268 aaaggcgccgaccacttcg 184286 >gi|85861424|gb|AC177914.1| Zea mays chromosome UNK clone CH201-13D11; ZMMBBc0013D11, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces Length = 217586 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ggatgcgtctggccatcta 32 ||||||||||||||||||| Sbjct: 105738 ggatgcgtctggccatcta 105720 >gi|4827507|gb|AI668199.1|AI668199 605018B04.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 641 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 363 gtcatcgccgccgtcgtc 380 >gi|4834953|gb|AI670179.1|AI670179 605019D11.x2 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 562 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 431 gtcatcgccgccgtcgtc 448 >gi|5124488|gb|AI746224.1|AI746224 605083A06.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 571 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 436 gtcatcgccgccgtcgtc 453 >gi|8401201|gb|BE056835.1|BE056835 945033C04.Y1 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence Length = 482 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 299 gtcatcgccgccgtcgtc 282 >gi|8401215|gb|BE056849.1|BE056849 945033F01.Y1 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence Length = 319 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 251 gtcatcgccgccgtcgtc 268 >gi|8577314|gb|BE129951.1|BE129951 945033F01.X1 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence Length = 343 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 134 gtcatcgccgccgtcgtc 117 >gi|9255070|gb|BE345538.1|BE345538 946035F05.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 389 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 139 gtcatcgccgccgtcgtc 122 >gi|9461302|gb|BE453665.1|BE453665 946049E08.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 535 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 284 gtcatcgccgccgtcgtc 267 >gi|9462043|gb|BE454032.1|BE454032 946049E08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 569 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 428 gtcatcgccgccgtcgtc 445 >gi|9566391|gb|BE475900.1|BE475900 946049E08.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 510 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 386 gtcatcgccgccgtcgtc 403 >gi|9566392|gb|BE475901.1|BE475901 946049E08.y2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 478 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 335 gtcatcgccgccgtcgtc 318 >gi|13150118|gb|BG320440.1|BG320440 Zm03_10b11_A Zm03_AAFC_ECORC_cold_stressed_maize_seedlings Zea mays cDNA clone Zm03_10b11, mRNA sequence Length = 726 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 401 gtcatcgccgccgtcgtc 418 >gi|21391164|gb|BQ529213.1|BQ529213 1091056A11.x1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 615 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 444 gtcatcgccgccgtcgtc 461 >gi|21625953|gb|BQ620874.1|BQ620874 1091061A08.x1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 577 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 362 gtcatcgccgccgtcgtc 379 >gi|22472215|gb|BU036695.1|BU036695 946128H10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 669 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 342 gtcatcgccgccgtcgtc 325 >gi|22472406|gb|BU036886.1|BU036886 946130E06.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 552 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 203 gtcatcgccgccgtcgtc 186 >gi|22541986|gb|BU092424.1|BU092424 946130E06.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 402 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 318 gtcatcgccgccgtcgtc 335 >gi|22545901|gb|BU098260.1|BU098260 946133D08.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 707 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 339 gtcatcgccgccgtcgtc 322 >gi|26457264|gb|CA828847.1|CA828847 1114034B09.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 621 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 304 gtcatcgccgccgtcgtc 287 >gi|26457273|gb|CA828856.1|CA828856 1114034C06.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 605 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 336 gtcatcgccgccgtcgtc 319 >gi|26457279|gb|CA828862.1|CA828862 1114034C12.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 530 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 286 gtcatcgccgccgtcgtc 269 >gi|32805416|gb|CD957652.1|CD957652 SCK_212 GeneTag2 Zea mays cDNA, mRNA sequence Length = 397 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 329 gtcatcgccgccgtcgtc 312 >gi|32845759|gb|CD985440.1|CD985440 QAN10a07.yg QAN Zea mays cDNA clone QAN10a07, mRNA sequence Length = 396 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 224 gtcatcgccgccgtcgtc 241 >gi|32855896|gb|CD995577.1|CD995577 QBB26e12.xg QBB Zea mays cDNA clone QBB26e12, mRNA sequence Length = 780 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 359 gtcatcgccgccgtcgtc 342 >gi|32855903|gb|CD995584.1|CD995584 QBB26f07.xg QBB Zea mays cDNA clone QBB26f07, mRNA sequence Length = 762 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 344 gtcatcgccgccgtcgtc 327 >gi|32859856|gb|CD999537.1|CD999537 QBF6h05.pg QBF Zea mays cDNA clone QBF6h05, mRNA sequence Length = 687 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 351 gtcatcgccgccgtcgtc 368 >gi|32859857|gb|CD999538.1|CD999538 QBF6h05.xg QBF Zea mays cDNA clone QBF6h05, mRNA sequence Length = 570 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 337 gtcatcgccgccgtcgtc 320 >gi|32862199|gb|CF001881.1|CF001881 QBG7b09.pg QBG Zea mays cDNA clone QBG7b09, mRNA sequence Length = 526 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 204 gtcatcgccgccgtcgtc 221 >gi|32862200|gb|CF001882.1|CF001882 QBG7b09.xg QBG Zea mays cDNA clone QBG7b09, mRNA sequence Length = 575 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 322 gtcatcgccgccgtcgtc 305 >gi|32868517|gb|CF008199.1|CF008199 QBI8b11.pg QBI Zea mays cDNA clone QBI8b11, mRNA sequence Length = 612 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 276 gtcatcgccgccgtcgtc 293 >gi|32868518|gb|CF008200.1|CF008200 QBI8b11.xg QBI Zea mays cDNA clone QBI8b11, mRNA sequence Length = 574 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 337 gtcatcgccgccgtcgtc 320 >gi|32912671|gb|CF017483.1|CF017483 QBM24f08.xg QBM Zea mays cDNA clone QBM24f08, mRNA sequence Length = 738 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 337 gtcatcgccgccgtcgtc 320 >gi|32914557|gb|CF019369.1|CF019369 QBN18f07.xg QBN Zea mays cDNA clone QBN18f07, mRNA sequence Length = 737 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 337 gtcatcgccgccgtcgtc 320 >gi|32928670|gb|CF033482.1|CF033482 QCF17c04.yg QCF Zea mays cDNA clone QCF17c04, mRNA sequence Length = 491 Score = 36.2 bits (18), Expect = 4.1 Identities = 48/58 (82%) Strand = Plus / Minus Query: 206 ggctgagcggccactacggcgtgtcggagttcgtcatctccaacaccatctccgccac 263 |||||| ||| |||||||| || ||| ||| |||||| |||||||||||| ||||| Sbjct: 395 ggctgaacgggcactacggtgtcgcggcgtttgtcatcagcaacaccatctcagccac 338 >gi|32928750|gb|CF033562.1|CF033562 QCF18c07.yg QCF Zea mays cDNA clone QCF18c07, mRNA sequence Length = 558 Score = 36.2 bits (18), Expect = 4.1 Identities = 48/58 (82%) Strand = Plus / Minus Query: 206 ggctgagcggccactacggcgtgtcggagttcgtcatctccaacaccatctccgccac 263 |||||| ||| |||||||| || ||| ||| |||||| |||||||||||| ||||| Sbjct: 394 ggctgaacgggcactacggtgtcgcggcgtttgtcatcagcaacaccatctcagccac 337 >gi|32928799|gb|CF033611.1|CF033611 QCF18h02.yg QCF Zea mays cDNA clone QCF18h02, mRNA sequence Length = 491 Score = 36.2 bits (18), Expect = 4.1 Identities = 48/58 (82%) Strand = Plus / Minus Query: 206 ggctgagcggccactacggcgtgtcggagttcgtcatctccaacaccatctccgccac 263 |||||| ||| |||||||| || ||| ||| |||||| |||||||||||| ||||| Sbjct: 395 ggctgaacgggcactacggtgtcgcggcgtttgtcatcagcaacaccatctcagccac 338 >gi|32937740|gb|CF042559.1|CF042559 QCI4g03.yg QCI Zea mays cDNA clone QCI4g03, mRNA sequence Length = 545 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 341 gtcatcgccgccgtcgtc 324 >gi|33770813|gb|CF273107.1|CF273107 EST2669 Zea mays sperm cell cDNA library Zea mays cDNA clone Zmsp7195 5', mRNA sequence Length = 627 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 328 aaaggcgccgaccacttc 345 |||||||||||||||||| Sbjct: 477 aaaggcgccgaccacttc 494 >gi|60347688|gb|DN214661.1|DN214661 MEST863_F10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 691 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 376 gtcatcgccgccgtcgtc 393 >gi|60352330|gb|DN219303.1|DN219303 MEST1079_G07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 678 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 376 gtcatcgccgccgtcgtc 393 >gi|60352585|gb|DN219558.1|DN219558 MEST1083_H04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 497 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 225 gtcatcgccgccgtcgtc 208 >gi|60399167|gb|DN231981.1|DN231981 MEST1186_A09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 655 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 343 gtcatcgccgccgtcgtc 360 >gi|71298449|gb|DR785204.1|DR785204 ZM_BFb0001K08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 747 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 335 ccgaccacttcgtctact 352 |||||||||||||||||| Sbjct: 33 ccgaccacttcgtctact 16 >gi|71298450|gb|DR785205.1|DR785205 ZM_BFb0001K08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 747 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 335 ccgaccacttcgtctact 352 |||||||||||||||||| Sbjct: 715 ccgaccacttcgtctact 732 >gi|71774801|gb|DR972679.1|DR972679 ZM_BFb0095P06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 534 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 449 gcgccggggtgcagggtg 466 |||||||||||||||||| Sbjct: 523 gcgccggggtgcagggtg 506 >gi|78025481|gb|DV493868.1|DV493868 1000104-E07.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 639 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 383 gtcatcgccgccgtcgtc 400 >gi|78544679|gb|DV622177.1|DV622177 IV-1091-406B-C06.T7-1 UGIV-1091-Reseq Zea mays cDNA, mRNA sequence Length = 670 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 403 gtcatcgccgccgtcgtc 420 |||||||||||||||||| Sbjct: 472 gtcatcgccgccgtcgtc 489 >gi|84977618|gb|DW476040.1|DW476040 1124 Zea mays central cell cDNA library Zea mays cDNA clone CC1124, mRNA sequence Length = 463 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 407 tcgccgccgtcgtcccgg 424 |||||||||||||||||| Sbjct: 171 tcgccgccgtcgtcccgg 154 >gi|21207520|gb|AY104442.1| Zea mays PCO096884 mRNA sequence Length = 1115 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 335 ccgaccacttcgtctact 352 |||||||||||||||||| Sbjct: 178 ccgaccacttcgtctact 195 >gi|21207520|gb|AY104442.1| Zea mays PCO096884 mRNA sequence Length = 1115 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 335 ccgaccacttcgtctact 352 |||||||||||||||||| Sbjct: 178 ccgaccacttcgtctact 195 >gi|92110182|gb|AC185319.1| Zea mays chromosome UNK clone CH201-24O2; ZMMBBc0024O02, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 191791 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 328 aaaggcgccgaccacttc 345 |||||||||||||||||| Sbjct: 163815 aaaggcgccgaccacttc 163832 >gi|91065018|gb|AC184794.1| Zea mays chromosome UNK clone CH201-120D4; ZMMBBc0120D04, *** SEQUENCING IN PROGRESS ***, 24 unordered pieces Length = 192323 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 335 ccgaccacttcgtctact 352 |||||||||||||||||| Sbjct: 71112 ccgaccacttcgtctact 71095 >gi|89941530|gb|AC183785.1| Zea mays chromosome UNK clone CH201-190D17; ZMMBBc0190D17, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces Length = 152182 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 428 tcctgatggggatcatcg 445 |||||||||||||||||| Sbjct: 102295 tcctgatggggatcatcg 102312 >gi|85861385|gb|AC177875.1| Zea mays chromosome UNK clone ZMMBBb-251P22; ZMMBBb0251P22, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces Length = 155459 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 328 aaaggcgccgaccacttc 345 |||||||||||||||||| Sbjct: 57402 aaaggcgccgaccacttc 57419 >gi|85861334|gb|AC177824.1| Zea mays chromosome UNK clone CH201-259G1; ZMMBBc0259G01, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 185847 Score = 36.2 bits (18), Expect = 4.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 328 aaaggcgccgaccacttc 345 |||||||||||||||||| Sbjct: 122668 aaaggcgccgaccacttc 122651 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 217,489 Number of Sequences: 836351 Number of extensions: 217489 Number of successful extensions: 19739 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 19621 Number of HSP's gapped (non-prelim): 117 length of query: 510 length of database: 669,372,029 effective HSP length: 19 effective length of query: 491 effective length of database: 653,481,360 effective search space: 320859347760 effective search space used: 320859347760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)