BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3115079.2.1 (636 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|5919532|gb|AW054629.1|AW054629 660012H11.x1 660 - Mixed stage... 1172 0.0 gi|6851523|gb|AW352533.1|AW352533 660029C05.x1 660 - Mixed stage... 1021 0.0 gi|5816292|gb|AI987208.1|AI987208 660001G11.x1 660 - Mixed stage... 841 0.0 gi|5928697|gb|AW055914.1|AW055914 660002F11.y1 660 - Mixed stage... 771 0.0 gi|21208325|gb|AY105247.1| Zea mays PCO125249 mRNA sequence 575 e-162 gi|21208325|gb|AY105247.1| Zea mays PCO125249 mRNA sequence 575 e-162 gi|18660129|gb|BM500701.1|BM500701 PAC000000000109 Pioneer AF-1 ... 573 e-161 gi|5919513|gb|AW054610.1|AW054610 660012E10.x1 660 - Mixed stage... 502 e-140 gi|5816264|gb|AI987180.1|AI987180 660001C01.x1 660 - Mixed stage... 311 6e-83 gi|37399991|gb|CF637339.1|CF637339 zmrww00_0B20-004-f05.s4 zmrww... 38 1.3 gi|40337418|gb|CK371488.1|CK371488 zmrww005_0B20-004-f05.s0 zmrw... 38 1.3 gi|37391470|gb|CF632978.1|CF632978 zmrws48_0B20-010-b10.s1 zmrws... 36 5.2 gi|37392066|gb|CF633279.1|CF633279 zmrws48_0B20-013-h05.s4 zmrws... 36 5.2 gi|21212434|gb|AY109051.1| Zea mays PCO106076 mRNA sequence 36 5.2 gi|47083404|gb|BV147299.1| PZA02691-80001-Tx501 Zea mays Tx501 Z... 36 5.2 gi|47083400|gb|BV147295.1| PZA02691-80014-Mo17 Zea mays Mo17 Zea... 36 5.2 gi|47083399|gb|BV147294.1| PZA02691-80009-Mo17 Zea mays Mo17 Zea... 36 5.2 gi|47083395|gb|BV147290.1| PZA02691-79997-B73 Zea mays B73 Zea m... 36 5.2 gi|21212434|gb|AY109051.1| Zea mays PCO106076 mRNA sequence 36 5.2 gi|93004162|gb|AC185491.1| Zea mays chromosome 1 clone ZMMBBb-18... 36 5.2 gi|90992691|gb|AC184694.1| Zea mays chromosome UNK clone ZMMBBb-... 36 5.2 gi|89257775|gb|AC177893.2| Zea mays chromosome UNK clone CH201-2... 36 5.2 >gi|5919532|gb|AW054629.1|AW054629 660012H11.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 591 Score = 1172 bits (591), Expect = 0.0 Identities = 591/591 (100%) Strand = Plus / Plus Query: 46 tgcatagtacagtggaacaacactacaacaggctgtatagtgccttatttgtacaatgtc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgcatagtacagtggaacaacactacaacaggctgtatagtgccttatttgtacaatgtc 60 Query: 106 taggaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 taggaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaa 120 Query: 166 atattagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atattagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtg 180 Query: 226 atgtttctgtatatataattaatctttatgcttgccatgtacccaccattatattagctt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgtttctgtatatataattaatctttatgcttgccatgtacccaccattatattagctt 240 Query: 286 gtgaaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggccaaaa 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgaaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggccaaaa 300 Query: 346 gccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtac 360 Query: 406 tccagcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttctg 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tccagcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttctg 420 Query: 466 ctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattgct 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattgct 480 Query: 526 ggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctacctggttc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctacctggttc 540 Query: 586 atgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 636 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 atgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 591 >gi|6851523|gb|AW352533.1|AW352533 660029C05.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 528 Score = 1021 bits (515), Expect = 0.0 Identities = 520/522 (99%) Strand = Plus / Plus Query: 43 cattgcatagtacagtggaacaacactacaacaggctgtatagtgccttatttgtacaat 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cattgcatagtacagtggaacaacactacaacaggctgtatagtgccttatttgtacaat 60 Query: 103 gtctaggaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagt 162 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtctaggaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagc 120 Query: 163 aaaatattagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttat 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaaatattagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttat 180 Query: 223 gtgatgtttctgtatatataattaatctttatgcttgccatgtacccaccattatattag 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtgatgtttctgtatatataattaatctttatgcttgccatgtacccaccattatattag 240 Query: 283 cttgtgaaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggcca 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cttgtgaaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggcca 300 Query: 343 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 360 Query: 403 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 420 Query: 463 ctgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatatt 522 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 421 ctgctaatcttgagcttctctggctgaagnttaaggcagaactcaagcctgttcaatatt 480 Query: 523 gctggtccaccaggatgcacagcccaaaatatatcgttgaaa 564 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gctggtccaccaggatgcacagcccaaaatatatcgttgaaa 522 >gi|5816292|gb|AI987208.1|AI987208 660001G11.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 443 Score = 841 bits (424), Expect = 0.0 Identities = 438/443 (98%) Strand = Plus / Plus Query: 112 gcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaaatatta 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaaatatta 60 Query: 172 gcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtgatgttt 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 61 gcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtttttttt 120 Query: 232 ctgtatatataattaatctttatgcttgccatgtacccaccattatattagcttgtgaag 291 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 121 ctgtatatataattaatctttatgcttgccatgtacccaccattatattagcttgngaag 180 Query: 292 gttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggccaaaagccaag 351 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 181 gttttctttacacctcgaactagcagtccttcaaaggggatgcctgggccaaaagccaag 240 Query: 352 atcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtactccagc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtactccagc 300 Query: 412 acatagaagattgtattgctgctcacatttccatagttcattaaggcttttctgctaatc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acatagaagattgtattgctgctcacatttccatagttcattaaggcttttctgctaatc 360 Query: 472 ttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattgctggtcca 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattgctggtcca 420 Query: 532 ccaggatgcacagcccaaaatat 554 ||||||||||||||||||||||| Sbjct: 421 ccaggatgcacagcccaaaatat 443 >gi|5928697|gb|AW055914.1|AW055914 660002F11.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 426 Score = 771 bits (389), Expect = 0.0 Identities = 389/389 (100%) Strand = Plus / Minus Query: 109 gaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaaata 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gaagcaaactcaagtaccttacactgtttgatagatgaagaacacaaatacagtaaaata 345 Query: 169 ttagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtgatg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 ttagcgatgtgctatgtggtgctcagcttccaccgagacatctatgctctttatgtgatg 285 Query: 229 tttctgtatatataattaatctttatgcttgccatgtacccaccattatattagcttgtg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 tttctgtatatataattaatctttatgcttgccatgtacccaccattatattagcttgtg 225 Query: 289 aaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggccaaaagcc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 aaggttttctttacacctcgaactagcagtccttcaaaggtgatgcctgggccaaaagcc 165 Query: 349 aagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtactcc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 aagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagtactcc 105 Query: 409 agcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttctgcta 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 agcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttctgcta 45 Query: 469 atcttgagcttctctggctgaagtttaag 497 ||||||||||||||||||||||||||||| Sbjct: 44 atcttgagcttctctggctgaagtttaag 16 >gi|21208325|gb|AY105247.1| Zea mays PCO125249 mRNA sequence Length = 1176 Score = 575 bits (290), Expect = e-162 Identities = 293/294 (99%) Strand = Plus / Minus Query: 343 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 1117 Query: 403 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 1057 Query: 463 ctgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatatt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatatt 997 Query: 523 gctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctacctgg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 996 gctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctaccttg 937 Query: 583 ttcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 636 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 ttcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 883 >gi|21208325|gb|AY105247.1| Zea mays PCO125249 mRNA sequence Length = 1176 Score = 575 bits (290), Expect = e-162 Identities = 293/294 (99%) Strand = Plus / Minus Query: 343 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 aaagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaag 1117 Query: 403 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 tactccagcacatagaagattgtattgctgctcacatttccatagttcattaaggctttt 1057 Query: 463 ctgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatatt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatatt 997 Query: 523 gctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctacctgg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 996 gctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctaccttg 937 Query: 583 ttcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 636 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 ttcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 883 >gi|18660129|gb|BM500701.1|BM500701 PAC000000000109 Pioneer AF-1 array Zea mays cDNA, mRNA sequence Length = 416 Score = 573 bits (289), Expect = e-161 Identities = 292/293 (99%) Strand = Plus / Minus Query: 344 aagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 aagccaagatcaatccccactcttcacttattgcccctttctttaactcgtccctcaagt 357 Query: 404 actccagcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttc 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 actccagcacatagaagattgtattgctgctcacatttccatagttcattaaggcttttc 297 Query: 464 tgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 tgctaatcttgagcttctctggctgaagtttaaggcagaactcaagcctgttcaatattg 237 Query: 524 ctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctacctggt 583 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 236 ctggtccaccaggatgcacagcccaaaatatatcgttgaaatcctttatccctaccttgt 177 Query: 584 tcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 636 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 tcatgagagtcctgcagaaaccttctatgcggctttcaatcttctcaggcaaa 124 >gi|5919513|gb|AW054610.1|AW054610 660012E10.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 257 Score = 502 bits (253), Expect = e-140 Identities = 253/253 (100%) Strand = Plus / Plus Query: 34 tcctgcaatcattgcatagtacagtggaacaacactacaacaggctgtatagtgccttat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 tcctgcaatcattgcatagtacagtggaacaacactacaacaggctgtatagtgccttat 63 Query: 94 ttgtacaatgtctaggaagcaaactcaagtaccttacactgtttgatagatgaagaacac 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ttgtacaatgtctaggaagcaaactcaagtaccttacactgtttgatagatgaagaacac 123 Query: 154 aaatacagtaaaatattagcgatgtgctatgtggtgctcagcttccaccgagacatctat 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 aaatacagtaaaatattagcgatgtgctatgtggtgctcagcttccaccgagacatctat 183 Query: 214 gctctttatgtgatgtttctgtatatataattaatctttatgcttgccatgtacccacca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 gctctttatgtgatgtttctgtatatataattaatctttatgcttgccatgtacccacca 243 Query: 274 ttatattagcttg 286 ||||||||||||| Sbjct: 244 ttatattagcttg 256 >gi|5816264|gb|AI987180.1|AI987180 660001C01.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 157 Score = 311 bits (157), Expect = 6e-83 Identities = 157/157 (100%) Strand = Plus / Plus Query: 1 gttcactcatccatacaagcagtattaaagtattcctgcaatcattgcatagtacagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gttcactcatccatacaagcagtattaaagtattcctgcaatcattgcatagtacagtgg 60 Query: 61 aacaacactacaacaggctgtatagtgccttatttgtacaatgtctaggaagcaaactca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacaacactacaacaggctgtatagtgccttatttgtacaatgtctaggaagcaaactca 120 Query: 121 agtaccttacactgtttgatagatgaagaacacaaat 157 ||||||||||||||||||||||||||||||||||||| Sbjct: 121 agtaccttacactgtttgatagatgaagaacacaaat 157 >gi|37399991|gb|CF637339.1|CF637339 zmrww00_0B20-004-f05.s4 zmrww00 Zea mays cDNA 3', mRNA sequence Length = 585 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 ttacactgtttgatagatg 145 ||||||||||||||||||| Sbjct: 74 ttacactgtttgatagatg 56 >gi|40337418|gb|CK371488.1|CK371488 zmrww005_0B20-004-f05.s0 zmrww005 Zea mays cDNA 5', mRNA sequence Length = 612 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 ttacactgtttgatagatg 145 ||||||||||||||||||| Sbjct: 518 ttacactgtttgatagatg 536 >gi|37391470|gb|CF632978.1|CF632978 zmrws48_0B20-010-b10.s1 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 400 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 63 atgtttctgtatatataa 80 >gi|37392066|gb|CF633279.1|CF633279 zmrws48_0B20-013-h05.s4 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 438 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 16 atgtttctgtatatataa 33 >gi|21212434|gb|AY109051.1| Zea mays PCO106076 mRNA sequence Length = 1172 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 110 aagcaaactcaagtacct 127 |||||||||||||||||| Sbjct: 84 aagcaaactcaagtacct 101 >gi|47083404|gb|BV147299.1| PZA02691-80001-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 262 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 166 atgtttctgtatatataa 149 >gi|47083400|gb|BV147295.1| PZA02691-80014-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 248 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 152 atgtttctgtatatataa 135 >gi|47083399|gb|BV147294.1| PZA02691-80009-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 254 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 158 atgtttctgtatatataa 141 >gi|47083395|gb|BV147290.1| PZA02691-79997-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 254 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 226 atgtttctgtatatataa 243 |||||||||||||||||| Sbjct: 158 atgtttctgtatatataa 141 >gi|21212434|gb|AY109051.1| Zea mays PCO106076 mRNA sequence Length = 1172 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 110 aagcaaactcaagtacct 127 |||||||||||||||||| Sbjct: 84 aagcaaactcaagtacct 101 >gi|93004162|gb|AC185491.1| Zea mays chromosome 1 clone ZMMBBb-185M19; ZMMBBb0185M19, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces Length = 109871 Score = 36.2 bits (18), Expect = 5.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 420 gattgtattgctgctcacattt 441 |||||||||||||| ||||||| Sbjct: 29026 gattgtattgctgcccacattt 29005 >gi|90992691|gb|AC184694.1| Zea mays chromosome UNK clone ZMMBBb-460H12; ZMMBBb0460H12, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 122012 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 611 tgcggctttcaatcttct 628 |||||||||||||||||| Sbjct: 6852 tgcggctttcaatcttct 6869 >gi|89257775|gb|AC177893.2| Zea mays chromosome UNK clone CH201-206I13; ZMMBBc0206I13, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 215203 Score = 36.2 bits (18), Expect = 5.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 83 tagtgccttatttgtaca 100 |||||||||||||||||| Sbjct: 117188 tagtgccttatttgtaca 117205 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 192,074 Number of Sequences: 836351 Number of extensions: 192074 Number of successful extensions: 13498 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13470 Number of HSP's gapped (non-prelim): 28 length of query: 636 length of database: 669,372,029 effective HSP length: 19 effective length of query: 617 effective length of database: 653,481,360 effective search space: 403197999120 effective search space used: 403197999120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)