BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2763110.2.1 (541 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|5296237|gb|AI782917.1|AI782917 614006E02.x2 614 - root cDNA l... 1039 0.0 gi|78022266|gb|DV490653.1|DV490653 1000020-H05.T7-1 UGI-Reseq Ze... 1037 0.0 gi|5846776|gb|AI999859.1|AI999859 614006E02.y1 614 - root cDNA l... 1021 0.0 gi|21212221|gb|AY108916.1| Zea mays PCO123628 mRNA sequence 1007 0.0 gi|21212221|gb|AY108916.1| Zea mays PCO123628 mRNA sequence 1007 0.0 gi|5762094|gb|AI967142.1|AI967142 614006E02.x3 614 - root cDNA l... 981 0.0 gi|32795122|gb|CD947358.1|CD947358 RFC_39 GeneTag1 Zea mays cDNA... 753 0.0 gi|32788278|gb|CD940514.1|CD940514 RAN_8 GeneTag1 Zea mays cDNA,... 567 e-160 gi|32801958|gb|CD954194.1|CD954194 SBN_27 GeneTag2 Zea mays cDNA... 567 e-160 gi|18164446|gb|BM334285.1|BM334285 MEST135-A10.T3 ISUM5-RN Zea m... 38 1.1 gi|28931215|gb|CB334576.1|CB334576 3529_1_37_1_F11.y_1 3529 - 2 ... 38 1.1 gi|29167996|gb|CB411256.1|CB411256 3529_1_60_1_H03.y_1 3529 - 2 ... 38 1.1 gi|30087998|gb|CB886203.1|CB886203 3529_1_93_1_C07.x_1 3529 - 2 ... 38 1.1 gi|30087999|gb|CB886204.1|CB886204 3529_1_93_1_C07.y_1 3529 - 2 ... 38 1.1 gi|30704903|gb|CD058628.1|CD058628 3529_1_105_1_F04.x_1 3529 - 2... 38 1.1 gi|30704906|gb|CD058629.1|CD058629 3529_1_105_1_F04.y_1 3529 - 2... 38 1.1 gi|29130122|gb|CB380826.1|CB380826 3529_1_41_1_D07.y_1 3529 - 2 ... 38 1.1 gi|29543668|gb|CB604048.1|CB604048 3529_1_54_1_A10.y_1 3529 - 2 ... 38 1.1 gi|29544804|gb|CB605412.1|CB605412 3529_1_60_1_H03.x_1 3529 - 2 ... 38 1.1 gi|71312330|gb|DR792687.1|DR792687 ZM_BFb0012K04.f ZM_BFb Zea ma... 38 1.1 gi|71325833|gb|DR799598.1|DR799598 ZM_BFb0022J21.f ZM_BFb Zea ma... 38 1.1 gi|71769829|gb|DR967766.1|DR967766 ZM_BFb0088M06.f ZM_BFb Zea ma... 38 1.1 gi|71771970|gb|DR969907.1|DR969907 ZM_BFb0091N14.f ZM_BFb Zea ma... 38 1.1 gi|76284208|gb|DV023776.1|DV023776 ZM_BFb0143K04.f ZM_BFb Zea ma... 38 1.1 gi|76915157|gb|DV165855.1|DV165855 ZM_BFb0163A16.f ZM_BFb Zea ma... 38 1.1 gi|78074882|gb|DV503316.1|DV503316 ZM_BFb0179E23.f ZM_BFb Zea ma... 38 1.1 gi|78081006|gb|DV509418.1|DV509418 ZM_BFb0188I02.f ZM_BFb Zea ma... 38 1.1 gi|78086743|gb|DV515136.1|DV515136 ZM_BFb0197J12.f ZM_BFb Zea ma... 38 1.1 gi|78087238|gb|DV515631.1|DV515631 ZM_BFb0198E21.f ZM_BFb Zea ma... 38 1.1 gi|91049962|gb|EB160380.1|EB160380 ZM_BFb0298D15.f ZM_BFb Zea ma... 38 1.1 gi|92900665|gb|AC185462.1| Zea mays chromosome UNK clone CH201-2... 38 1.1 gi|31359948|gb|CD444305.1|CD444305 EL01N0438C08.b Endosperm_4 Ze... 36 4.4 gi|60353287|gb|DN220260.1|DN220260 MEST1097_E05.T7-1 UGA-ZmSAM-X... 36 4.4 gi|71302469|gb|DR787353.1|DR787353 ZM_BFb0004M01.f ZM_BFb Zea ma... 36 4.4 gi|71756392|gb|DR954329.1|DR954329 ZM_BFb0046E22.f ZM_BFb Zea ma... 36 4.4 gi|71762036|gb|DR959973.1|DR959973 ZM_BFb0073A11.f ZM_BFb Zea ma... 36 4.4 gi|71769946|gb|DR967883.1|DR967883 ZM_BFb0088P02.f ZM_BFb Zea ma... 36 4.4 gi|74238570|gb|DT646484.1|DT646484 ZM_BFb0107A02.f ZM_BFb Zea ma... 36 4.4 gi|86468112|gb|DY234482.1|DY234482 ZM_BFb0244K08.f ZM_BFb Zea ma... 36 4.4 gi|88758155|gb|DY542296.1|DY542296 ZM_BFb0367M15.f ZM_BFb Zea ma... 36 4.4 gi|54653327|gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA se... 36 4.4 gi|54653327|gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA se... 36 4.4 gi|91064995|gb|AC184771.1| Zea mays chromosome UNK clone CH201-2... 36 4.4 >gi|5296237|gb|AI782917.1|AI782917 614006E02.x2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 541 Score = 1039 bits (524), Expect = 0.0 Identities = 524/524 (100%) Strand = Plus / Plus Query: 1 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 60 Query: 61 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 120 Query: 121 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 180 Query: 181 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 240 Query: 241 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 300 Query: 301 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 360 Query: 361 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 420 Query: 421 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 480 Query: 481 gacatatattcagttcaaataaactactttaaatattttcgttt 524 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gacatatattcagttcaaataaactactttaaatattttcgttt 524 >gi|78022266|gb|DV490653.1|DV490653 1000020-H05.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 538 Score = 1037 bits (523), Expect = 0.0 Identities = 523/523 (100%) Strand = Plus / Minus Query: 1 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 478 Query: 61 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 418 Query: 121 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 358 Query: 181 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 298 Query: 241 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 238 Query: 301 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 178 Query: 361 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 118 Query: 421 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 58 Query: 481 gacatatattcagttcaaataaactactttaaatattttcgtt 523 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 gacatatattcagttcaaataaactactttaaatattttcgtt 15 >gi|5846776|gb|AI999859.1|AI999859 614006E02.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 546 Score = 1021 bits (515), Expect = 0.0 Identities = 521/523 (99%) Strand = Plus / Plus Query: 2 caccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 caccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatg 66 Query: 62 aggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtt 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 aggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtt 126 Query: 122 tgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagagg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagagg 186 Query: 182 ttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctca 241 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 187 ttcgagggaagtcatgtcgactttagaggctgcaggtttgagctcctcccgttcggctca 246 Query: 242 ggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggcc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggcc 306 Query: 302 aacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 aacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgat 366 Query: 362 atggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctatt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 atggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctatt 426 Query: 422 aagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 aagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttg 486 Query: 482 acatatattcagttcaaataaactactttaaatattttcgttt 524 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 acatatattcagttcaaataaactactttaaatattttcgttt 529 >gi|21212221|gb|AY108916.1| Zea mays PCO123628 mRNA sequence Length = 535 Score = 1007 bits (508), Expect = 0.0 Identities = 508/508 (100%) Strand = Plus / Minus Query: 8 gagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatgaggagc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatgaggagc 466 Query: 68 tgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtttgggca 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 tgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtttgggca 406 Query: 128 atgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgag 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 atgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgag 346 Query: 188 ggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctcaggacga 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctcaggacga 286 Query: 248 aggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 aggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctg 226 Query: 308 ttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgatatggaa 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 ttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgatatggaa 166 Query: 368 gaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctattaagaga 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctattaagaga 106 Query: 428 gtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttgacatat 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 gtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttgacatat 46 Query: 488 attcagttcaaataaactactttaaata 515 |||||||||||||||||||||||||||| Sbjct: 45 attcagttcaaataaactactttaaata 18 >gi|21212221|gb|AY108916.1| Zea mays PCO123628 mRNA sequence Length = 535 Score = 1007 bits (508), Expect = 0.0 Identities = 508/508 (100%) Strand = Plus / Minus Query: 8 gagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatgaggagc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gagaacttcaggatccacccaccggggaccttgttgattccacgggagaccatgaggagc 466 Query: 68 tgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtttgggca 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 tgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgtttgggca 406 Query: 128 atgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgag 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 atgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgag 346 Query: 188 ggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctcaggacga 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctcaggacga 286 Query: 248 aggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 aggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctg 226 Query: 308 ttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgatatggaa 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 ttacattgctttgattggcagctccctgaagggatggtggaggaggacatcgatatggaa 166 Query: 368 gaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctattaagaga 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctattaagaga 106 Query: 428 gtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttgacatat 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 gtataaatgtataattgcactggaaggatgatagactatacgtgcattctcttgacatat 46 Query: 488 attcagttcaaataaactactttaaata 515 |||||||||||||||||||||||||||| Sbjct: 45 attcagttcaaataaactactttaaata 18 >gi|5762094|gb|AI967142.1|AI967142 614006E02.x3 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 495 Score = 981 bits (495), Expect = 0.0 Identities = 495/495 (100%) Strand = Plus / Minus Query: 1 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 gcaccaggagaacttcaggatccacccaccggggaccttgttgattccacgggagaccat 436 Query: 61 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 gaggagctgcgtcattggcggctacgacgtgctgccaggcacaaggattttcgtgaacgt 376 Query: 121 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 ttgggcaatgggaagggatcctagcatctgggatcgcccggaggagttcagtcccgagag 316 Query: 181 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 gttcgagggaagtcatgtcgactttagaggctccagttttgagctcctcccgttcggctc 256 Query: 241 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 aggacgaaggtcatgccctgccatcgccatgggtgtcgccaatgtggagcttgtcttggc 196 Query: 301 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 caacctgttacattgctttgattggcagctccctgaagggatggtggaggaggacatcga 136 Query: 361 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 tatggaagaaacagggcagcttgcttttaggaagatggtgcctctttgtcttgtgcctat 76 Query: 421 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 taagagagtataaatgtataattgcactggaaggatgatagactatacgtgcattctctt 16 Query: 481 gacatatattcagtt 495 ||||||||||||||| Sbjct: 15 gacatatattcagtt 1 >gi|32795122|gb|CD947358.1|CD947358 RFC_39 GeneTag1 Zea mays cDNA, mRNA sequence Length = 404 Score = 753 bits (380), Expect = 0.0 Identities = 398/404 (98%) Strand = Plus / Plus Query: 19 gatccacccaccggggaccttgttgattccacgggagaccatgaggagctgcgtcattgg 78 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatccccccaccggggaccttgttgattccacgggagaccatgaggagctgcgtcattgg 60 Query: 79 cggctacgacgtgctgccaggcacaaggattttcgtgaacgtttgggcaatgggaaggga 138 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggctacgacgtgctgccgggcacaaggattttcgtgaacgtttgggcaatgggaaggga 120 Query: 139 tcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcatgt 198 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcatgt 180 Query: 199 cgactttagaggctccagttttgagctcctcccgttcggctcaggacgaaggtcatgccc 258 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 181 cgactttagaggctccagttttgagctcctcccgctcggctcagggcgaaggtcatgccc 240 Query: 259 tgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgctt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgctt 300 Query: 319 tgattggcagctccctgaagggatggtggaggaggacatcgatatggaagaaacagggca 378 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgattggcagctccctgaaggaatggtggaggaggacatcgatatggaagaaacagggca 360 Query: 379 gcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 422 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 404 >gi|32788278|gb|CD940514.1|CD940514 RAN_8 GeneTag1 Zea mays cDNA, mRNA sequence Length = 286 Score = 567 bits (286), Expect = e-160 Identities = 286/286 (100%) Strand = Plus / Plus Query: 137 gatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcat 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcat 60 Query: 197 gtcgactttagaggctccagttttgagctcctcccgttcggctcaggacgaaggtcatgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtcgactttagaggctccagttttgagctcctcccgttcggctcaggacgaaggtcatgc 120 Query: 257 cctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgc 180 Query: 317 tttgattggcagctccctgaagggatggtggaggaggacatcgatatggaagaaacaggg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tttgattggcagctccctgaagggatggtggaggaggacatcgatatggaagaaacaggg 240 Query: 377 cagcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 422 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cagcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 286 >gi|32801958|gb|CD954194.1|CD954194 SBN_27 GeneTag2 Zea mays cDNA, mRNA sequence Length = 286 Score = 567 bits (286), Expect = e-160 Identities = 286/286 (100%) Strand = Plus / Plus Query: 137 gatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcat 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatcctagcatctgggatcgcccggaggagttcagtcccgagaggttcgagggaagtcat 60 Query: 197 gtcgactttagaggctccagttttgagctcctcccgttcggctcaggacgaaggtcatgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtcgactttagaggctccagttttgagctcctcccgttcggctcaggacgaaggtcatgc 120 Query: 257 cctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctgccatcgccatgggtgtcgccaatgtggagcttgtcttggccaacctgttacattgc 180 Query: 317 tttgattggcagctccctgaagggatggtggaggaggacatcgatatggaagaaacaggg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tttgattggcagctccctgaagggatggtggaggaggacatcgatatggaagaaacaggg 240 Query: 377 cagcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 422 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cagcttgcttttaggaagatggtgcctctttgtcttgtgcctatta 286 >gi|18164446|gb|BM334285.1|BM334285 MEST135-A10.T3 ISUM5-RN Zea mays cDNA clone MEST135-A10 3', mRNA sequence Length = 637 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 157 cccggaggagttcagtcccgagaggttcgag 187 ||||||||||||||| || ||| |||||||| Sbjct: 474 cccggaggagttcaggccggagcggttcgag 444 >gi|28931215|gb|CB334576.1|CB334576 3529_1_37_1_F11.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 409 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 209 ggagttcaggcccgagaggttcg 231 >gi|29167996|gb|CB411256.1|CB411256 3529_1_60_1_H03.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 637 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 157 ggagttcaggcccgagaggttcg 179 >gi|30087998|gb|CB886203.1|CB886203 3529_1_93_1_C07.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 620 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 518 ggagttcaggcccgagaggttcg 496 >gi|30087999|gb|CB886204.1|CB886204 3529_1_93_1_C07.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 630 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 154 ggagttcaggcccgagaggttcg 176 >gi|30704903|gb|CD058628.1|CD058628 3529_1_105_1_F04.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 578 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 519 ggagttcaggcccgagaggttcg 497 >gi|30704906|gb|CD058629.1|CD058629 3529_1_105_1_F04.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 615 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 158 ggagttcaggcccgagaggttcg 180 >gi|29130122|gb|CB380826.1|CB380826 3529_1_41_1_D07.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 618 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 162 ggagttcaggcccgagaggttcg 184 >gi|29543668|gb|CB604048.1|CB604048 3529_1_54_1_A10.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 622 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 222 ggagttcaggcccgagaggttcg 244 >gi|29544804|gb|CB605412.1|CB605412 3529_1_60_1_H03.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 592 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 488 ggagttcaggcccgagaggttcg 466 >gi|71312330|gb|DR792687.1|DR792687 ZM_BFb0012K04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 718 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 497 ggagttcaggcccgagaggttcg 475 >gi|71325833|gb|DR799598.1|DR799598 ZM_BFb0022J21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 638 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 498 ggagttcaggcccgagaggttcg 476 >gi|71769829|gb|DR967766.1|DR967766 ZM_BFb0088M06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 718 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 680 ggagttcaggcccgagaggttcg 658 >gi|71771970|gb|DR969907.1|DR969907 ZM_BFb0091N14.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 674 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 667 ggagttcaggcccgagaggttcg 645 >gi|76284208|gb|DV023776.1|DV023776 ZM_BFb0143K04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 639 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 499 ggagttcaggcccgagaggttcg 477 >gi|76915157|gb|DV165855.1|DV165855 ZM_BFb0163A16.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 536 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 396 ggagttcaggcccgagaggttcg 374 >gi|78074882|gb|DV503316.1|DV503316 ZM_BFb0179E23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 758 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 497 ggagttcaggcccgagaggttcg 475 >gi|78081006|gb|DV509418.1|DV509418 ZM_BFb0188I02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 658 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 446 ggagttcaggcccgagaggttcg 424 >gi|78086743|gb|DV515136.1|DV515136 ZM_BFb0197J12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 779 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 565 ggagttcaggcccgagaggttcg 543 >gi|78087238|gb|DV515631.1|DV515631 ZM_BFb0198E21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 755 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 667 ggagttcaggcccgagaggttcg 645 >gi|91049962|gb|EB160380.1|EB160380 ZM_BFb0298D15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 610 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttcg 185 ||||||||| ||||||||||||| Sbjct: 565 ggagttcaggcccgagaggttcg 543 >gi|92900665|gb|AC185462.1| Zea mays chromosome UNK clone CH201-283D10; ZMMBBc0283D10, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 176850 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 482 acatatattcagttcaaataaac 504 |||||||||||||||| |||||| Sbjct: 71093 acatatattcagttcatataaac 71115 >gi|31359948|gb|CD444305.1|CD444305 EL01N0438C08.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 729 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 60 tgaggagctgcgtcattg 77 |||||||||||||||||| Sbjct: 444 tgaggagctgcgtcattg 427 >gi|60353287|gb|DN220260.1|DN220260 MEST1097_E05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 646 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 506 ggagttcaggcccgagaggttc 485 >gi|71302469|gb|DR787353.1|DR787353 ZM_BFb0004M01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 598 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 552 ggagttcaggcccgagaggttc 531 >gi|71756392|gb|DR954329.1|DR954329 ZM_BFb0046E22.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 710 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 491 cagttcaaataaactactttaa 512 ||||||||||||| |||||||| Sbjct: 180 cagttcaaataaattactttaa 201 >gi|71762036|gb|DR959973.1|DR959973 ZM_BFb0073A11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 682 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 423 ggagttcaggcccgagaggttc 402 >gi|71769946|gb|DR967883.1|DR967883 ZM_BFb0088P02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 684 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 423 ggagttcaggcccgagaggttc 402 >gi|74238570|gb|DT646484.1|DT646484 ZM_BFb0107A02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 629 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 556 ggagttcaggcccgagaggttc 535 >gi|86468112|gb|DY234482.1|DY234482 ZM_BFb0244K08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 686 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 423 ggagttcaggcccgagaggttc 402 >gi|88758155|gb|DY542296.1|DY542296 ZM_BFb0367M15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 725 Score = 36.2 bits (18), Expect = 4.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 163 ggagttcagtcccgagaggttc 184 ||||||||| |||||||||||| Sbjct: 423 ggagttcaggcccgagaggttc 402 >gi|54653327|gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA sequence Length = 1776 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 60 tgaggagctgcgtcattg 77 |||||||||||||||||| Sbjct: 444 tgaggagctgcgtcattg 427 >gi|54653327|gb|BT018546.1| Zea mays clone EL01N0438C08.d mRNA sequence Length = 1776 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 60 tgaggagctgcgtcattg 77 |||||||||||||||||| Sbjct: 444 tgaggagctgcgtcattg 427 >gi|91064995|gb|AC184771.1| Zea mays chromosome UNK clone CH201-26C13; ZMMBBc0026C13, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 169944 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 128 atgggaagggatcctagc 145 |||||||||||||||||| Sbjct: 34278 atgggaagggatcctagc 34295 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 183,825 Number of Sequences: 836351 Number of extensions: 183825 Number of successful extensions: 13684 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13632 Number of HSP's gapped (non-prelim): 52 length of query: 541 length of database: 669,372,029 effective HSP length: 19 effective length of query: 522 effective length of database: 653,481,360 effective search space: 341117269920 effective search space used: 341117269920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)