BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2750663.2.1 (1282 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|91176472|gb|AC184834.1| Zea mays chromosome UNK clone ZMMBBb-... 2488 0.0 gi|13149785|gb|BG320107.1|BG320107 Zm03_01e10_A Zm03_AAFC_ECORC_... 1594 0.0 gi|21210852|gb|AY107774.1| Zea mays PCO065853 mRNA sequence 1316 0.0 gi|21210852|gb|AY107774.1| Zea mays PCO065853 mRNA sequence 1316 0.0 gi|78024868|gb|DV493255.1|DV493255 1000093-H03.T7-1 UGI-Reseq Ze... 1261 0.0 gi|5268601|gb|AI770565.1|AI770565 606054D04.x2 606 - Ear tissue ... 1181 0.0 gi|44900356|gb|CK826901.1|CK826901 zmrsub1_0A20-006-d12.s0 zmrsu... 1162 0.0 gi|32924317|gb|CF029129.1|CF029129 QCC4g05.yg QCC Zea mays cDNA ... 1098 0.0 gi|12969524|gb|BG266468.1|BG266468 1000093H03.x1 1000 - Unigene ... 557 e-156 gi|32924528|gb|CF029340.1|CF029340 QCC7h09.yg QCC Zea mays cDNA ... 557 e-156 gi|60347924|gb|DN214897.1|DN214897 MEST901_F12.T7-1 UGA-ZmSAM-XZ... 452 e-125 gi|4775969|gb|AI664972.1|AI664972 605005B06.x1 605 - Endosperm c... 115 1e-23 gi|12969886|gb|BG266706.1|BG266706 1000100D11.x3 1000 - Unigene ... 115 1e-23 gi|78026844|gb|DV495231.1|DV495231 1000100-D11.T7-1 UGI-Reseq Ze... 115 1e-23 gi|8665580|gb|BE186396.1|BE186396 946005D06.X3 946 - tassel prim... 111 2e-22 gi|8665281|gb|BE186097.1|BE186097 946005D06.X2 946 - tassel prim... 101 2e-19 gi|5791198|gb|AI977990.1|AI977990 614043E04.x2 614 - root cDNA l... 90 8e-16 gi|32935418|gb|CF040230.1|CF040230 QCI10g07.yg QCI Zea mays cDNA... 90 8e-16 gi|50325067|gb|CO520193.1|CO520193 3530_1_133_1_A08.y_1 3530 - F... 90 8e-16 gi|50325066|gb|CO520192.1|CO520192 3530_1_133_1_A08.x_1 3530 - F... 82 2e-13 gi|51593013|gb|CV072159.1|CV072159 EST4320 Zea mays embryo sac c... 82 2e-13 gi|45589185|gb|BV119812.1| PZA01373 M37W Zea mays M37W Zea mays ... 80 8e-13 gi|45589180|gb|BV119807.1| PZA01373 Oh43 Zea mays Oh43 Zea mays ... 80 8e-13 gi|74241300|gb|DT649214.1|DT649214 ZM_BFb0111K04.f ZM_BFb Zea ma... 72 2e-10 gi|21207288|gb|AY104210.1| Zea mays PCO085619 mRNA sequence 72 2e-10 gi|45589193|gb|BV119820.1| PZA01373 CML69 Zea mays CML69 Zea may... 72 2e-10 gi|45589192|gb|BV119819.1| PZA01373 CML322 Zea mays CML322 Zea m... 72 2e-10 gi|45589191|gb|BV119818.1| PZA01373 CML333 Zea mays CML333 Zea m... 72 2e-10 gi|45589190|gb|BV119817.1| PZA01373 Kul11 Zea mays Kul11 Zea may... 72 2e-10 gi|45589189|gb|BV119816.1| PZA01373 Kul3 Zea mays Kul3 Zea mays ... 72 2e-10 gi|45589188|gb|BV119815.1| PZA01373 NC350 Zea mays NC350 Zea may... 72 2e-10 gi|45589187|gb|BV119814.1| PZA01373 CML247 Zea mays CML247 Zea m... 72 2e-10 gi|45589186|gb|BV119813.1| PZA01373 Hp301 Zea mays Hp301 Zea may... 72 2e-10 gi|45589183|gb|BV119810.1| PZA01373 Mo17(2) Zea mays Mo17(2) Zea... 72 2e-10 gi|45589182|gb|BV119809.1| PZA01373 Mo17(1) Zea mays Mo17(1) Zea... 72 2e-10 gi|45589179|gb|BV119806.1| PZA01373 B73(2) Zea mays B73(2) Zea m... 72 2e-10 gi|45589178|gb|BV119805.1| PZA01373 B73(1) Zea mays B73(1) Zea m... 72 2e-10 gi|21207288|gb|AY104210.1| Zea mays PCO085619 mRNA sequence 72 2e-10 gi|45589181|gb|BV119808.1| PZA01373 Il14H Zea mays Il14H Zea may... 64 5e-08 gi|45589184|gb|BV119811.1| PZA01373 Ky21 Zea mays Ky21 Zea mays ... 42 0.17 gi|90186360|gb|AC183505.2| Zea mays chromosome UNK clone ZMMBBb-... 40 0.68 gi|91982793|gb|AC185249.1| Zea mays chromosome UNK clone CH201-5... 38 2.7 gi|85861398|gb|AC177888.1| Zea mays chromosome UNK clone CH201-2... 38 2.7 gi|58082479|gb|AC155620.2| Zea mays strain B73 clone ZMMBBc0352I... 38 2.7 >gi|91176472|gb|AC184834.1| Zea mays chromosome UNK clone ZMMBBb-578J3; ZMMBBb0578J03, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 119906 Score = 2488 bits (1255), Expect = 0.0 Identities = 1275/1282 (99%) Strand = Plus / Plus Query: 1 tgccgnggaagcgaaacgcaatcacaatatcgaaaccttacacttccaatggattagggc 60 ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 29730 tgccgtggaggcgaaacgcaatcacaatatcgaaaccttacactttcaatggattagggc 29789 Query: 61 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29790 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 29849 Query: 121 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29850 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 29909 Query: 181 gttgctcgtactcctggcttggaaaaacatcaggcagcagactagccgagatgttgtgcg 240 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 29910 gttgctcgtactcctggcttggaaaaacatcaggcagcagactggtcgagatgttgttcg 29969 Query: 241 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29970 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 30029 Query: 301 tgcccttgctcttcatcacgagcagaatgttcttgagcaggtccgggaccacctcctgca 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 30030 tgcccttgctcttcatcacgagcaggatgttcttgagcaggtccgggaccacctcctgca 30089 Query: 361 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30090 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 30149 Query: 421 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30150 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 30209 Query: 481 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30210 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 30269 Query: 541 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30270 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 30329 Query: 601 caaaggcatgggaccacgtcgcggactggaggcagagttctcccgtggatgttaggcatc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30330 caaaggcatgggaccacgtcgcggactggaggcagagttctcccgtggatgttaggcatc 30389 Query: 661 gctggagagaagccagcgcatggtttcgcacctcctccctctgatccaggctcagtttct 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30390 gctggagagaagccagcgcatggtttcgcacctcctccctctgatccaggctcagtttct 30449 Query: 721 tcagtgcttgcagcagcctgagccacatctcccttatcgcctccggccctttctcgcctt 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30450 tcagtgcttgcagcagcctgagccacatctcccttatcgcctccggccctttctcgcctt 30509 Query: 781 cttcaaatgtcgtcgcttttatctcttgggaccacaaggcaaggtttctgacggagtcgg 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30510 cttcaaatgtcgtcgcttttatctcttgggaccacaaggcaaggtttctgacggagtcgg 30569 Query: 841 acatcaagtccagggcacggacagacctatcagctaaaccaactctagactcggcaaact 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30570 acatcaagtccagggcacggacagacctatcagctaaaccaactctagactcggcaaact 30629 Query: 901 gccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccctctgtca 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30630 gccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccctctgtca 30689 Query: 961 tgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatgg 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30690 tgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatgg 30749 Query: 1021 agagcagcaatattactgttctccagcccatctgtgactttatatgtgccgcatttgctt 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30750 agagcagcaatattactgttctccagcccatctgtgactttatatgtgccgcatttgctt 30809 Query: 1081 tgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgt 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30810 tgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgt 30869 Query: 1141 cgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctccttgtatg 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30870 cgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctccttgtatg 30929 Query: 1201 gtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgagagcacacg 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30930 gtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgagagcacacg 30989 Query: 1261 gcataactgtggactgaactat 1282 |||||||||||||||||||||| Sbjct: 30990 gcataactgtggactgaactat 31011 >gi|13149785|gb|BG320107.1|BG320107 Zm03_01e10_A Zm03_AAFC_ECORC_cold_stressed_maize_seedlings Zea mays cDNA clone Zm03_01e10, mRNA sequence Length = 826 Score = 1594 bits (804), Expect = 0.0 Identities = 822/827 (99%), Gaps = 1/827 (0%) Strand = Plus / Plus Query: 1 tgccgnggaagcgaaacgcaatcacaatatcgaaaccttacacttccaatggattagggc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgccgnggaagcgaaacgcaatcacaatatcgaaaccttacacttccaatggattagggc 60 Query: 61 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 120 Query: 121 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 180 Query: 181 gttgctcgtactcctggcttggaaaaacatcaggcagcagactagccgagatgttgtgcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gttgctcgtactcctggcttggaaaaacatcaggcagcagactagccgagatgttgtgcg 240 Query: 241 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 300 Query: 301 tgcccttgctcttcatcacgagcagaatgttcttgagcaggtccgggaccacctcctgca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcccttgctcttcatcacgagcagaatgttcttgagcaggtccgggaccacctcctgca 360 Query: 361 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 420 Query: 421 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 480 Query: 481 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 540 Query: 541 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 600 Query: 601 caaaggcatgggaccacgtcgcggactggaggcagagttctcccgtggatgttaggcatc 660 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 601 caaaggcatgggaccacgtcgcggactggatgcagagttctcccgtggatgttaggcatc 660 Query: 661 gctggagagaagccagcgcatggtttcgcacctcctccctctgatccaggctcagtttct 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 gctggagagaagccagcgcatggtttcgcacctcctccctctgatccaggctcagtttct 720 Query: 721 tcagtgcttgcagcagcctgagccacatctcccttatcgcctccggccctttctcgcctt 780 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 721 tcagtgcttgcagcagcctgagccacatctcccttatcg-cyycggccctttctcgcctt 779 Query: 781 cttcaaatgtcgtcgcttttatctcttgggaccacaaggcaaggttt 827 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 780 cttcaaatgtcgtcgcttttatctcttgggaacacaaggcaaggttt 826 >gi|21210852|gb|AY107774.1| Zea mays PCO065853 mRNA sequence Length = 672 Score = 1316 bits (664), Expect = 0.0 Identities = 671/672 (99%), Gaps = 1/672 (0%) Strand = Plus / Minus Query: 554 ctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatggga 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 ctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatggga 613 Query: 614 ccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagc 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 ccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagc 553 Query: 674 cagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcag 733 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 cagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcag 493 Query: 734 cagcctgagccacatctcccttatcgcctccggccctttctcgccttcttcaaatgtcgt 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 cagcctgagccacatctcccttatcgcctccggccctttctcgccttcttcaaatgtcgt 433 Query: 794 cgcttttatctcttgggaccacaaggcaaggtttctgacggagtcggacatcaagtccag 853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 cgcttttatctcttgggaccacaaggcaaggtttctgacggagtcggacatcaagtccag 373 Query: 854 ggcacggacagacctatcagctaaaccaactctagactcggcaaactgccgtgccgcatc 913 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ggcacggacagacctatcagctaaaccaactctagactcggcaaactgccgtgccgcatc 313 Query: 914 gatgcagaagccatagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgat 973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 gatgcagaagccatagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgat 253 Query: 974 agcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatggagagcagcaatat 1033 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 agcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatggagagcagcaatat 193 Query: 1034 tactgttctccagcccatctgtgactttatatgtgccgcatttgctttg-acgagccgtg 1092 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 192 tactgttctccagcccatctgtgactttatatgtgccgcatttgctttgcacgagccgtg 133 Query: 1093 caacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaa 1152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 caacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaa 73 Query: 1153 ctaactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctct 1212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 ctaactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctct 13 Query: 1213 ggcatatcctca 1224 |||||||||||| Sbjct: 12 ggcatatcctca 1 >gi|21210852|gb|AY107774.1| Zea mays PCO065853 mRNA sequence Length = 672 Score = 1316 bits (664), Expect = 0.0 Identities = 671/672 (99%), Gaps = 1/672 (0%) Strand = Plus / Minus Query: 554 ctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatggga 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 ctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatggga 613 Query: 614 ccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagc 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 ccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagc 553 Query: 674 cagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcag 733 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 cagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcag 493 Query: 734 cagcctgagccacatctcccttatcgcctccggccctttctcgccttcttcaaatgtcgt 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 cagcctgagccacatctcccttatcgcctccggccctttctcgccttcttcaaatgtcgt 433 Query: 794 cgcttttatctcttgggaccacaaggcaaggtttctgacggagtcggacatcaagtccag 853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 cgcttttatctcttgggaccacaaggcaaggtttctgacggagtcggacatcaagtccag 373 Query: 854 ggcacggacagacctatcagctaaaccaactctagactcggcaaactgccgtgccgcatc 913 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ggcacggacagacctatcagctaaaccaactctagactcggcaaactgccgtgccgcatc 313 Query: 914 gatgcagaagccatagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgat 973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 gatgcagaagccatagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgat 253 Query: 974 agcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatggagagcagcaatat 1033 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 agcctcaaaaccgacttcggaagcatctggatggcgtgctgtaatggagagcagcaatat 193 Query: 1034 tactgttctccagcccatctgtgactttatatgtgccgcatttgctttg-acgagccgtg 1092 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 192 tactgttctccagcccatctgtgactttatatgtgccgcatttgctttgcacgagccgtg 133 Query: 1093 caacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaa 1152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 caacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaa 73 Query: 1153 ctaactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctct 1212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 ctaactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctct 13 Query: 1213 ggcatatcctca 1224 |||||||||||| Sbjct: 12 ggcatatcctca 1 >gi|78024868|gb|DV493255.1|DV493255 1000093-H03.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 674 Score = 1261 bits (636), Expect = 0.0 Identities = 651/656 (99%) Strand = Plus / Plus Query: 28 tatcgaaaccttacacttccaatggattagggcacgagcagtagtaaacctagtaaaaca 87 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 tatcgaaaccttacactttcaatggattagggcacgagcagtagtaaacctagtaaaaca 78 Query: 88 aataaaacatacacacacggtcgcacacaagttaaaacattgaccgctacgcctcaacag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 aataaaacatacacacacggtcgcacacaagttaaaacattgaccgctacgcctcaacag 138 Query: 148 gactgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gactgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaa 198 Query: 208 catcaggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggc 267 |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 199 catcaggcagcagactggtcgagatgttgttcgcgtgaagccacgtcagctcccacaggc 258 Query: 268 tgtcgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 259 tgtcgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagga 318 Query: 328 tgttcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggacct 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 tgttcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggacct 378 Query: 388 tgaccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tgaccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgc 438 Query: 448 ttaggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcga 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ttaggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcga 498 Query: 508 gcacaagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctcca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 gcacaagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctcca 558 Query: 568 gcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggact 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggact 618 Query: 628 ggaggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatgg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 ggaggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatgg 674 >gi|5268601|gb|AI770565.1|AI770565 606054D04.x2 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 596 Score = 1181 bits (596), Expect = 0.0 Identities = 596/596 (100%) Strand = Plus / Minus Query: 687 cgcacctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccac 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 cgcacctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccac 537 Query: 747 atctcccttatcgcctccggccctttctcgccttcttcaaatgtcgtcgcttttatctct 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 atctcccttatcgcctccggccctttctcgccttcttcaaatgtcgtcgcttttatctct 477 Query: 807 tgggaccacaaggcaaggtttctgacggagtcggacatcaagtccagggcacggacagac 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 tgggaccacaaggcaaggtttctgacggagtcggacatcaagtccagggcacggacagac 417 Query: 867 ctatcagctaaaccaactctagactcggcaaactgccgtgccgcatcgatgcagaagcca 926 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 ctatcagctaaaccaactctagactcggcaaactgccgtgccgcatcgatgcagaagcca 357 Query: 927 tagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgatagcctcaaaaccg 986 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 tagttcgctagtgaaaggtgagccccctctgtcatgatgaacacgatagcctcaaaaccg 297 Query: 987 acttcggaagcatctggatggcgtgctgtaatggagagcagcaatattactgttctccag 1046 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 acttcggaagcatctggatggcgtgctgtaatggagagcagcaatattactgttctccag 237 Query: 1047 cccatctgtgactttatatgtgccgcatttgctttgacgagccgtgcaacctcctgtgtg 1106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 cccatctgtgactttatatgtgccgcatttgctttgacgagccgtgcaacctcctgtgtg 177 Query: 1107 atgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaactaactgcaacgac 1166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 atgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaactaactgcaacgac 117 Query: 1167 ctcagtaattcatcagcaagattctccttgtatggtagcaacctctggcatatcctcagg 1226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 ctcagtaattcatcagcaagattctccttgtatggtagcaacctctggcatatcctcagg 57 Query: 1227 agtccaaaaatagctttctccacgagagcacacggcataactgtggactgaactat 1282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56 agtccaaaaatagctttctccacgagagcacacggcataactgtggactgaactat 1 >gi|44900356|gb|CK826901.1|CK826901 zmrsub1_0A20-006-d12.s0 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 770 Score = 1162 bits (586), Expect = 0.0 Identities = 606/613 (98%) Strand = Plus / Plus Query: 1 tgccgnggaagcgaaacgcaatcacaatatcgaaaccttacacttccaatggattagggc 60 ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 158 tgccgtggaggcgaaacgcaatcacaatatcgaaaccttacactttcaatggattagggc 217 Query: 61 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 acgagcagtagtaaacctagtaaaacaaataaaacatacacacacggtcgcacacaagtt 277 Query: 121 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 aaaacattgaccgctacgcctcaacaggactgggccctcttgggctaccggtgctgctct 337 Query: 181 gttgctcgtactcctggcttggaaaaacatcaggcagcagactagccgagatgttgtgcg 240 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 338 gttgctcgtactcctggcttggaaaaacatcaggcagcagactggtcgagatgttgttcg 397 Query: 241 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 cgtgaagccacgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaagga 457 Query: 301 tgcccttgctcttcatcacgagcagaatgttcttgagcaggtccgggaccacctcctgca 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 458 tgcccttgctcttcatcacgagcaggatgttcttgagcaggtccgggaccacctcctgca 517 Query: 361 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gccggtcgctccgcttgcctcggaccttgaccttgacgtacttctccatccggctcagga 577 Query: 421 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 cccccagccacagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggt 637 Query: 481 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ataccttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtcct 697 Query: 541 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 tctgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggt 757 Query: 601 caaaggcatggga 613 ||||||||||||| Sbjct: 758 caaaggcatggga 770 >gi|32924317|gb|CF029129.1|CF029129 QCC4g05.yg QCC Zea mays cDNA clone QCC4g05, mRNA sequence Length = 554 Score = 1098 bits (554), Expect = 0.0 Identities = 554/554 (100%) Strand = Plus / Plus Query: 400 acttctccatccggctcaggacccccagccacagcttgcagaaactgcttaggccgaaaa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acttctccatccggctcaggacccccagccacagcttgcagaaactgcttaggccgaaaa 60 Query: 460 ggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagcacaagtgacc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagcacaagtgacc 120 Query: 520 cttccatgtttctgtagtccttctgggagtggttctggctgatctccagcaaatcatcga 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttccatgtttctgtagtccttctgggagtggttctggctgatctccagcaaatcatcga 180 Query: 580 gcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactggaggcagagtt 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactggaggcagagtt 240 Query: 640 ctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgcacctcctccc 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgcacctcctccc 300 Query: 700 tctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatctcccttatcg 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatctcccttatcg 360 Query: 760 cctccggccctttctcgccttcttcaaatgtcgtcgcttttatctcttgggaccacaagg 819 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctccggccctttctcgccttcttcaaatgtcgtcgcttttatctcttgggaccacaagg 420 Query: 820 caaggtttctgacggagtcggacatcaagtccagggcacggacagacctatcagctaaac 879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 caaggtttctgacggagtcggacatcaagtccagggcacggacagacctatcagctaaac 480 Query: 880 caactctagactcggcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtg 939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 caactctagactcggcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtg 540 Query: 940 aaaggtgagccccc 953 |||||||||||||| Sbjct: 541 aaaggtgagccccc 554 >gi|12969524|gb|BG266468.1|BG266468 1000093H03.x1 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 301 Score = 557 bits (281), Expect = e-156 Identities = 296/301 (98%) Strand = Plus / Plus Query: 191 ctcctggcttggaaaaacatcaggcagcagactagccgagatgttgtgcgcgtgaagcca 250 ||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| Sbjct: 1 ctcctggcttggaaaaacatcaggcagcagactggtcgagatgttgttcgcgtgaagcca 60 Query: 251 cgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcaaggatgcccttgct 310 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 61 cgtcagctcccacaggctgtcgcccccgatcgtgctcctcttcgcagggatgcccttgct 120 Query: 311 cttcatcacgagcagaatgttcttgagcaggtccgggaccacctcctgcagccggtcgct 370 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttcatcacgagcaggatgttcttgagcaggtccgggaccacctcctgcagccggtcgct 180 Query: 371 ccgcttgcctcggaccttgaccttgacgtacttctccatccggctcaggacccccagcca 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccgcttgcctcggaccttgaccttgacgtacttctccatccggctcaggacccccagcca 240 Query: 431 cagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggtataccttcgc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cagcttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggtataccttcgc 300 Query: 491 a 491 | Sbjct: 301 a 301 >gi|32924528|gb|CF029340.1|CF029340 QCC7h09.yg QCC Zea mays cDNA clone QCC7h09, mRNA sequence Length = 281 Score = 557 bits (281), Expect = e-156 Identities = 281/281 (100%) Strand = Plus / Plus Query: 400 acttctccatccggctcaggacccccagccacagcttgcagaaactgcttaggccgaaaa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acttctccatccggctcaggacccccagccacagcttgcagaaactgcttaggccgaaaa 60 Query: 460 ggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagcacaagtgacc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagcacaagtgacc 120 Query: 520 cttccatgtttctgtagtccttctgggagtggttctggctgatctccagcaaatcatcga 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttccatgtttctgtagtccttctgggagtggttctggctgatctccagcaaatcatcga 180 Query: 580 gcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactggaggcagagtt 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactggaggcagagtt 240 Query: 640 ctcccgtggatgttaggcatcgctggagagaagccagcgca 680 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcccgtggatgttaggcatcgctggagagaagccagcgca 281 >gi|60347924|gb|DN214897.1|DN214897 MEST901_F12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 840 Score = 452 bits (228), Expect = e-125 Identities = 234/236 (99%) Strand = Plus / Minus Query: 1047 cccatctgtgactttatatgtgccgcatttgctttgacgagccgtgcaacctcctgtgtg 1106 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 840 cccatctgtgactttatatgtgccgcatttgctttgacgagccgtgcaacatcctgtgtg 781 Query: 1107 atgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaactaactgcaacgac 1166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 atgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaactaactgcaacgac 721 Query: 1167 ctcagtaattcatcagcaagattctccttgtatggtagcaacctctggcatatcctcagg 1226 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 720 ctcagtaattcatcagcaagattctccttgtatggtagcaacatctggcatatcctcagg 661 Query: 1227 agtccaaaaatagctttctccacgagagcacacggcataactgtggactgaactat 1282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 agtccaaaaatagctttctccacgagagcacacggcataactgtggactgaactat 605 >gi|4775969|gb|AI664972.1|AI664972 605005B06.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 601 Score = 115 bits (58), Expect = 1e-23 Identities = 96/108 (88%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 185 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 126 Query: 192 tc---ctggcttggaaaaacatcaggcagcagactagccgagatgttg 236 || ||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 125 tcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 78 Score = 58.0 bits (29), Expect = 3e-06 Identities = 35/37 (94%) Strand = Plus / Minus Query: 928 agttcgctagtgaaaggtgagccccctctgtcatgat 964 ||||| |||||||||||||||||| |||||||||||| Sbjct: 60 agttcactagtgaaaggtgagccctctctgtcatgat 24 >gi|12969886|gb|BG266706.1|BG266706 1000100D11.x3 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 583 Score = 115 bits (58), Expect = 1e-23 Identities = 96/108 (88%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 208 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 149 Query: 192 tc---ctggcttggaaaaacatcaggcagcagactagccgagatgttg 236 || ||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 148 tcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 101 Score = 63.9 bits (32), Expect = 5e-08 Identities = 76/92 (82%), Gaps = 9/92 (9%) Strand = Plus / Minus Query: 928 agttcgctagtgaaaggtgagccccctctgtcatgatgaacacgatagcctcaaaaccga 987 ||||| |||||||||||||||||| |||||||||| |||||||| ||||| | Sbjct: 83 agttcactagtgaaaggtgagccctctctgtcatg---------atagcctcgaaaccaa 33 Query: 988 cttcggaagcatctggatggcgtgctgtaatg 1019 |||| |||||||||||||| || ||||||||| Sbjct: 32 cttcagaagcatctggatgccgagctgtaatg 1 >gi|78026844|gb|DV495231.1|DV495231 1000100-D11.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 691 Score = 115 bits (58), Expect = 1e-23 Identities = 96/108 (88%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 248 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 189 Query: 192 tc---ctggcttggaaaaacatcaggcagcagactagccgagatgttg 236 || ||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 188 tcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 141 Score = 91.7 bits (46), Expect = 2e-16 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 928 agttcgctagtgaaaggtgagccccctctgtcatgatgaacacgatagcctcaaaaccga 987 ||||| |||||||||||||||||| ||||||||||| ||||||| ||||| | Sbjct: 123 agttcactagtgaaaggtgagccctctctgtcatga---------tagcctcgaaaccaa 73 Query: 988 cttcggaagcatctggatggcgtgctgtaatggagagcagcaatat 1033 |||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 72 cttcagaagcatctggatgccgagctgtaatggagagcagcaatat 27 >gi|8665580|gb|BE186396.1|BE186396 946005D06.X3 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 572 Score = 111 bits (56), Expect = 2e-22 Identities = 94/106 (88%), Gaps = 3/106 (2%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 106 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 47 Query: 192 tc---ctggcttggaaaaacatcaggcagcagactagccgagatgt 234 || ||| |||||||||||||||||||||| |||| |||||||| Sbjct: 46 tcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgt 1 >gi|8665281|gb|BE186097.1|BE186097 946005D06.X2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 504 Score = 101 bits (51), Expect = 2e-19 Identities = 80/89 (89%), Gaps = 3/89 (3%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 89 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 30 Query: 192 tc---ctggcttggaaaaacatcaggcag 217 || ||| |||||||||||||||||||| Sbjct: 29 tcctgctgacttggaaaaacatcaggcag 1 >gi|5791198|gb|AI977990.1|AI977990 614043E04.x2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 394 Score = 89.7 bits (45), Expect = 8e-16 Identities = 96/112 (85%), Gaps = 7/112 (6%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtg----ctgctctgttgctc 187 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||| Sbjct: 148 cgctacacctcaacaggactgggccctcttgggctaccggccggccctgccctgctgctc 89 Query: 188 gtactcctgg---cttggaaaaacatcaggcagcagactagccgagatgttg 236 ||||||||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 88 gtactcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 37 >gi|32935418|gb|CF040230.1|CF040230 QCI10g07.yg QCI Zea mays cDNA clone QCI10g07, mRNA sequence Length = 712 Score = 89.7 bits (45), Expect = 8e-16 Identities = 96/112 (85%), Gaps = 7/112 (6%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtg----ctgctctgttgctc 187 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||| Sbjct: 161 cgctacacctcaacaggactgggccctcttgggctaccggccggcactgccctgctgctc 102 Query: 188 gtactcct---ggcttggaaaaacatcaggcagcagactagccgagatgttg 236 |||||||| | |||||||||||||||||||||| |||| |||||||||| Sbjct: 101 gtactcctactgacttggaaaaacatcaggcagcaagctaggcgagatgttg 50 Score = 48.1 bits (24), Expect = 0.003 Identities = 30/32 (93%) Strand = Plus / Minus Query: 928 agttcgctagtgaaaggtgagccccctctgtc 959 ||||| |||||||||||||||||| ||||||| Sbjct: 32 agttcactagtgaaaggtgagccctctctgtc 1 >gi|50325067|gb|CO520193.1|CO520193 3530_1_133_1_A08.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 202 Score = 89.7 bits (45), Expect = 8e-16 Identities = 96/112 (85%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtg----ctgctctgttgctc 187 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||| Sbjct: 13 cgctacacctcaacaggactgggccctcttgggctaccggccggcactgccctgctgctc 72 Query: 188 gtactcctgg---cttggaaaaacatcaggcagcagactagccgagatgttg 236 ||||||||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 73 gtactcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 124 Score = 50.1 bits (25), Expect = 7e-04 Identities = 31/33 (93%) Strand = Plus / Plus Query: 928 agttcgctagtgaaaggtgagccccctctgtca 960 ||||| |||||||||||||||||| |||||||| Sbjct: 142 agttcactagtgaaaggtgagccctctctgtca 174 >gi|50325066|gb|CO520192.1|CO520192 3530_1_133_1_A08.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 182 Score = 81.8 bits (41), Expect = 2e-13 Identities = 89/104 (85%), Gaps = 7/104 (6%) Strand = Plus / Minus Query: 140 ctcaacaggactgggccctcttgggctaccggtg----ctgctctgttgctcgtactcct 195 |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| Sbjct: 182 ctcaacaggactgggccctcttgggctaccggccggcactgccctgctgctcgtactcct 123 Query: 196 gg---cttggaaaaacatcaggcagcagactagccgagatgttg 236 | |||||||||||||||||||||| |||| |||||||||| Sbjct: 122 gctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 79 Score = 50.1 bits (25), Expect = 7e-04 Identities = 31/33 (93%) Strand = Plus / Minus Query: 928 agttcgctagtgaaaggtgagccccctctgtca 960 ||||| |||||||||||||||||| |||||||| Sbjct: 61 agttcactagtgaaaggtgagccctctctgtca 29 >gi|51593013|gb|CV072159.1|CV072159 EST4320 Zea mays embryo sac cDNA library Zea mays cDNA clone ES9456 5' similar to Apical-basal pattern formation protein, mRNA sequence Length = 382 Score = 81.8 bits (41), Expect = 2e-13 Identities = 95/112 (84%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggcta----ccggtgctgctctgttgctc 187 |||||| |||||||||||||||||||||||||| || |||| |||| ||| ||||| Sbjct: 229 cgctacacctcaacaggactgggccctcttgggttaccggccggcactgccctgctgctc 288 Query: 188 gtactc---ctggcttggaaaaacatcaggcagcagactagccgagatgttg 236 |||||| ||| |||||||||||||||||||||| |||| |||||||||| Sbjct: 289 gtactcctgctgacttggaaaaacatcaggcagcaagctaggcgagatgttg 340 >gi|45589185|gb|BV119812.1| PZA01373 M37W Zea mays M37W Zea mays STS genomic, sequence tagged site Length = 294 Score = 79.8 bits (40), Expect = 8e-13 Identities = 55/60 (91%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 235 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 294 >gi|45589180|gb|BV119807.1| PZA01373 Oh43 Zea mays Oh43 Zea mays STS genomic, sequence tagged site Length = 292 Score = 79.8 bits (40), Expect = 8e-13 Identities = 55/60 (91%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccggtgctgctctgttgctcgtac 191 |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 233 cgctacacctcaacaggactgggccctcttgggctaccggcactgccctgctgctcgtac 292 >gi|74241300|gb|DT649214.1|DT649214 ZM_BFb0111K04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 541 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 124 cgctacccctcaacaggactgggccctcttgggctaccgg 85 >gi|21207288|gb|AY104210.1| Zea mays PCO085619 mRNA sequence Length = 1982 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 1870 cgctacacctcaacaggactgggccctcttgggctaccgg 1909 >gi|45589193|gb|BV119820.1| PZA01373 CML69 Zea mays CML69 Zea mays STS genomic, sequence tagged site Length = 297 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 235 cgctacacctcaacaggactgggccctcttgggctaccgg 274 >gi|45589192|gb|BV119819.1| PZA01373 CML322 Zea mays CML322 Zea mays STS genomic, sequence tagged site Length = 296 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 234 cgctacacctcaacaggactgggccctcttgggctaccgg 273 >gi|45589191|gb|BV119818.1| PZA01373 CML333 Zea mays CML333 Zea mays STS genomic, sequence tagged site Length = 292 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 233 cgctacacctcaacaggactgggccctcttgggctaccgg 272 >gi|45589190|gb|BV119817.1| PZA01373 Kul11 Zea mays Kul11 Zea mays STS genomic, sequence tagged site Length = 285 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 223 cgctacacctcaacaggactgggccctcttgggctaccgg 262 >gi|45589189|gb|BV119816.1| PZA01373 Kul3 Zea mays Kul3 Zea mays STS genomic, sequence tagged site Length = 294 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 234 cgctacacctcaacaggactgggccctcttgggctaccgg 273 >gi|45589188|gb|BV119815.1| PZA01373 NC350 Zea mays NC350 Zea mays STS genomic, sequence tagged site Length = 276 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 213 cgctacacctcaacaggactgggccctcttgggctaccgg 252 >gi|45589187|gb|BV119814.1| PZA01373 CML247 Zea mays CML247 Zea mays STS genomic, sequence tagged site Length = 285 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 222 cgctacacctcaacaggactgggccctcttgggctaccgg 261 >gi|45589186|gb|BV119813.1| PZA01373 Hp301 Zea mays Hp301 Zea mays STS genomic, sequence tagged site Length = 295 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 235 cgctacacctcaacaggactgggccctcttgggctaccgg 274 >gi|45589183|gb|BV119810.1| PZA01373 Mo17(2) Zea mays Mo17(2) Zea mays STS genomic, sequence tagged site Length = 287 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 225 cgctacacctcaacaggactgggccctcttgggctaccgg 264 >gi|45589182|gb|BV119809.1| PZA01373 Mo17(1) Zea mays Mo17(1) Zea mays STS genomic, sequence tagged site Length = 293 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 234 cgctacacctcaacaggactgggccctcttgggctaccgg 273 >gi|45589179|gb|BV119806.1| PZA01373 B73(2) Zea mays B73(2) Zea mays STS genomic, sequence tagged site Length = 297 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 235 cgctacacctcaacaggactgggccctcttgggctaccgg 274 >gi|45589178|gb|BV119805.1| PZA01373 B73(1) Zea mays B73(1) Zea mays STS genomic, sequence tagged site Length = 282 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 221 cgctacacctcaacaggactgggccctcttgggctaccgg 260 >gi|21207288|gb|AY104210.1| Zea mays PCO085619 mRNA sequence Length = 1982 Score = 71.9 bits (36), Expect = 2e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 1870 cgctacacctcaacaggactgggccctcttgggctaccgg 1909 >gi|45589181|gb|BV119808.1| PZA01373 Il14H Zea mays Il14H Zea mays STS genomic, sequence tagged site Length = 280 Score = 63.9 bits (32), Expect = 5e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggccctcttgggctaccgg 171 |||||| |||||||||||||||||||||||||| |||||| Sbjct: 224 cgctacacctcaacaggactgggccctcttgggttaccgg 263 >gi|45589184|gb|BV119811.1| PZA01373 Ky21 Zea mays Ky21 Zea mays STS genomic, sequence tagged site Length = 155 Score = 42.1 bits (21), Expect = 0.17 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 cgctacgcctcaacaggactgggcc 156 |||||| |||||||||||||||||| Sbjct: 131 cgctacacctcaacaggactgggcc 155 >gi|90186360|gb|AC183505.2| Zea mays chromosome UNK clone ZMMBBb-616L3; ZMMBBb0616L03, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces Length = 139491 Score = 40.1 bits (20), Expect = 0.68 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 taaaacaaataaaacataca 100 |||||||||||||||||||| Sbjct: 118865 taaaacaaataaaacataca 118884 >gi|91982793|gb|AC185249.1| Zea mays chromosome UNK clone CH201-527L20; ZMMBBc0527L20, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 180007 Score = 38.2 bits (19), Expect = 2.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 715 gtttcttcagtgcttgcagcagc 737 |||||||||||| |||||||||| Sbjct: 96877 gtttcttcagtggttgcagcagc 96899 >gi|85861398|gb|AC177888.1| Zea mays chromosome UNK clone CH201-209C6; ZMMBBc0209C06, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces Length = 182766 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 567 agcaaatcatcgagcaagg 585 ||||||||||||||||||| Sbjct: 137961 agcaaatcatcgagcaagg 137979 >gi|58082479|gb|AC155620.2| Zea mays strain B73 clone ZMMBBc0352I21, *** SEQUENCING IN PROGRESS ***, 27 unordered pieces Length = 194959 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 567 agcaaatcatcgagcaagg 585 ||||||||||||||||||| Sbjct: 149235 agcaaatcatcgagcaagg 149253 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 438,994 Number of Sequences: 836351 Number of extensions: 438994 Number of successful extensions: 30548 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30441 Number of HSP's gapped (non-prelim): 94 length of query: 1282 length of database: 669,372,029 effective HSP length: 20 effective length of query: 1262 effective length of database: 652,645,009 effective search space: 823638001358 effective search space used: 823638001358 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)