BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2448720.2.1 (510 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4681246|gb|AI629916.1|AI629916 486042A12.x2 486 - leaf primor... 928 0.0 gi|32848088|gb|CD987769.1|CD987769 QAO4h01.yg QAO Zea mays cDNA ... 759 0.0 gi|37384005|gb|CF629045.1|CF629045 zmrws48_0A10-012-g10.s3 zmrws... 567 e-160 gi|21214146|gb|AY110069.1| Zea mays CL9974_1 mRNA sequence 565 e-159 gi|21214146|gb|AY110069.1| Zea mays CL9974_1 mRNA sequence 565 e-159 gi|9732124|gb|BE510876.1|BE510876 946056B05.x1 946 - tassel prim... 509 e-142 gi|76925369|gb|DV170403.1|DV170403 ZM_BFb0169O11.f ZM_BFb Zea ma... 402 e-110 gi|47103946|gb|BV154489.1| PZA02404-71922-GT119 Zea mays GT119 Z... 339 2e-91 gi|47103953|gb|BV154496.1| PZA02404-71925-Tx501 Zea mays Tx501 Z... 303 1e-80 gi|47103952|gb|BV154495.1| PZA02404-71934-T218 Zea mays T218 Zea... 303 1e-80 gi|47103951|gb|BV154494.1| PZA02404-71936-NC7A Zea mays NC7A Zea... 303 1e-80 gi|47103950|gb|BV154493.1| PZA02404-71924-Mp708 Zea mays Mp708 Z... 303 1e-80 gi|47103949|gb|BV154492.1| PZA02404-71933-Mo17 Zea mays Mo17 Zea... 303 1e-80 gi|47103947|gb|BV154490.1| PZA02404-71926-IHO Zea mays IHO Zea m... 303 1e-80 gi|47103945|gb|BV154488.1| PZA02404-71923-CO159 Zea mays CO159 Z... 303 1e-80 gi|47103944|gb|BV154487.1| PZA02404-71921-B73 Zea mays B73 Zea m... 303 1e-80 gi|47103954|gb|BV154497.1| PZA02404-71937-W22_R-scm2 Zea mays W2... 295 3e-78 gi|47103948|gb|BV154491.1| PZA02404-71938-ILO Zea mays ILO Zea m... 289 2e-76 gi|76925370|gb|DV170404.1|DV170404 ZM_BFb0169O11.r ZM_BFb Zea ma... 127 1e-27 gi|67023356|gb|CO452105.1|CO452105 MZCCL10172G06.g Maize Endospe... 117 1e-24 >gi|4681246|gb|AI629916.1|AI629916 486042A12.x2 486 - leaf primordia cDNA library from Hake lab Zea mays cDNA, mRNA sequence Length = 512 Score = 928 bits (468), Expect = 0.0 Identities = 486/495 (98%) Strand = Plus / Minus Query: 1 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 453 Query: 61 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 393 Query: 121 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 333 Query: 181 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 273 Query: 241 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctctcn 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctctct 213 Query: 301 nnnnnnnnctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 ttttttttctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacg 153 Query: 361 tctagcctacaagttcagcatagggtagttcgtggagataggatctggccgagctgtttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 tctagcctacaagttcagcatagggtagttcgtggagataggatctggccgagctgtttg 93 Query: 421 atagtgtagggcagcttggaatgatgtctgtggagaaggcaagaaacgtgatactggaat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 atagtgtagggcagcttggaatgatgtctgtggagaaggcaagaaacgtgatactggaat 33 Query: 481 gagatttatcagtta 495 ||||||||||||||| Sbjct: 32 gagatttatcagtta 18 >gi|32848088|gb|CD987769.1|CD987769 QAO4h01.yg QAO Zea mays cDNA clone QAO4h01, mRNA sequence Length = 449 Score = 759 bits (383), Expect = 0.0 Identities = 419/433 (96%), Gaps = 2/433 (0%) Strand = Plus / Minus Query: 64 ggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccg 374 Query: 124 agatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagccac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 373 agatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagcccc 314 Query: 184 aggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaaccgac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 aggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaaccgac 254 Query: 244 tcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcc--tctctcnn 301 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 253 tcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctctctttt 194 Query: 302 nnnnnnnctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgt 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tttttttctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgt 134 Query: 362 ctagcctacaagttcagcatagggtagttcgtggagataggatctggccgagctgtttga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ctagcctacaagttcagcatagggtagttcgtggagataggatctggccgagctgtttga 74 Query: 422 tagtgtagggcagcttggaatgatgtctgtggagaaggcaagaaacgtgatactggaatg 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 73 tagtgtagggcagcttggaatgatgcctgtggagaaggcaagaaacgtgatactggaatg 14 Query: 482 agatttatcagtt 494 ||||||||||||| Sbjct: 13 agatttatcagtt 1 >gi|37384005|gb|CF629045.1|CF629045 zmrws48_0A10-012-g10.s3 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 556 Score = 567 bits (286), Expect = e-160 Identities = 295/298 (98%) Strand = Plus / Minus Query: 1 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 517 cggtcctagtctcgctcgacaacgtaggtgtctggaatctgcgcgccgaaaggctggatg 458 Query: 61 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 398 Query: 121 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 338 Query: 181 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 278 Query: 241 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctct 298 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 277 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcctcagttgattctctct 220 Score = 351 bits (177), Expect = 5e-95 Identities = 195/201 (97%) Strand = Plus / Minus Query: 309 ctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgtctagcct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgtctagcct 148 Query: 369 acaagttcagcatagggtagttcgtggagataggatctggccgagctgtttgatagtgta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 147 acaagttcagcatagggtagttcgtggagataggatctggccgagctgtttggtagtgta 88 Query: 429 gggcagcttggaatgatgtctgtggagaaggcaagaaacgtgatactggaatgagattta 488 ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 87 gggcagctttgaatgatgtctgtggagaaggcaagaaacttgatactcgaatgagattta 28 Query: 489 tcagttatccggtgcgtgttt 509 ||||||| || |||||||||| Sbjct: 27 tcagttacccagtgcgtgttt 7 >gi|21214146|gb|AY110069.1| Zea mays CL9974_1 mRNA sequence Length = 525 Score = 565 bits (285), Expect = e-159 Identities = 285/285 (100%) Strand = Plus / Minus Query: 1 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 423 Query: 61 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 363 Query: 121 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 303 Query: 181 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 243 Query: 241 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttca 285 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttca 198 Score = 295 bits (149), Expect = 3e-78 Identities = 149/149 (100%) Strand = Plus / Minus Query: 334 gcctagaggaaatagaacattgaaacgtctagcctacaagttcagcatagggtagttcgt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 gcctagaggaaatagaacattgaaacgtctagcctacaagttcagcatagggtagttcgt 90 Query: 394 ggagataggatctggccgagctgtttgatagtgtagggcagcttggaatgatgtctgtgg 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 ggagataggatctggccgagctgtttgatagtgtagggcagcttggaatgatgtctgtgg 30 Query: 454 agaaggcaagaaacgtgatactggaatga 482 ||||||||||||||||||||||||||||| Sbjct: 29 agaaggcaagaaacgtgatactggaatga 1 >gi|21214146|gb|AY110069.1| Zea mays CL9974_1 mRNA sequence Length = 525 Score = 565 bits (285), Expect = e-159 Identities = 285/285 (100%) Strand = Plus / Minus Query: 1 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 423 Query: 61 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 actggtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatca 363 Query: 121 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ccgagatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagc 303 Query: 181 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaacc 243 Query: 241 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttca 285 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttca 198 Score = 295 bits (149), Expect = 3e-78 Identities = 149/149 (100%) Strand = Plus / Minus Query: 334 gcctagaggaaatagaacattgaaacgtctagcctacaagttcagcatagggtagttcgt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 gcctagaggaaatagaacattgaaacgtctagcctacaagttcagcatagggtagttcgt 90 Query: 394 ggagataggatctggccgagctgtttgatagtgtagggcagcttggaatgatgtctgtgg 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 ggagataggatctggccgagctgtttgatagtgtagggcagcttggaatgatgtctgtgg 30 Query: 454 agaaggcaagaaacgtgatactggaatga 482 ||||||||||||||||||||||||||||| Sbjct: 29 agaaggcaagaaacgtgatactggaatga 1 >gi|9732124|gb|BE510876.1|BE510876 946056B05.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 284 Score = 509 bits (257), Expect = e-142 Identities = 275/284 (96%) Strand = Plus / Minus Query: 65 gtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccga 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 gtacagagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccga 225 Query: 125 gatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagccaca 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gatggtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaagccaca 165 Query: 185 ggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaaccgact 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 ggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaaccgact 105 Query: 245 cctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctctcnnnnn 304 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 cctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctctcttttt 45 Query: 305 nnnnctccaaagttttttggtagatttttgcctagaggaaatag 348 |||||||||||||||||||||||||||||||||||||||| Sbjct: 44 ttttctccaaagttttttggtagatttttgcctagaggaaatag 1 >gi|76925369|gb|DV170403.1|DV170403 ZM_BFb0169O11.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 405 Score = 402 bits (203), Expect = e-110 Identities = 206/207 (99%) Strand = Plus / Minus Query: 92 ggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgccctcta 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 ggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgccctcta 346 Query: 152 ctgtggtctactgaaggagaggcaaaagccacaggttcatgagtcgaacagcaagtcgtc 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ctgtggtctactgaaggagaggcaaaagccacaggttcatgagtcgaacagcaagtcgtc 286 Query: 212 ggcgcaaggcgatgctggatggagcaaccgactcctcgcaaccatgatcctggtcgtcgc 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ggcgcaaggcgatgctggatggagcaaccgactcctcgcaaccatgatcctggtcgtcgc 226 Query: 272 agctgtgatcttcagttgatcctctct 298 |||||||||||||||||||| |||||| Sbjct: 225 agctgtgatcttcagttgattctctct 199 Score = 337 bits (170), Expect = 8e-91 Identities = 182/186 (97%) Strand = Plus / Minus Query: 309 ctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgtctagcct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ctccaaagttttttggtagatttttgcctagaggaaatagaacattgaaacgtctagcct 127 Query: 369 acaagttcagcatagggtagttcgtggagataggatctggccgagctgtttgatagtgta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 126 acaagttcagcatagggtagttcgtggagataggatctggccgagctgtttggtagtgta 67 Query: 429 gggcagcttggaatgatgtctgtggagaaggcaagaaacgtgatactggaatgagattta 488 ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 66 gggcagctttgaatgatgtctgtggagaaggcaagaaacttgatactcgaatgagattta 7 Query: 489 tcagtt 494 |||||| Sbjct: 6 tcagtt 1 >gi|47103946|gb|BV154489.1| PZA02404-71922-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 435 Score = 339 bits (171), Expect = 2e-91 Identities = 171/171 (100%) Strand = Plus / Minus Query: 9 gtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatgactggtac 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatgactggtac 368 Query: 69 agagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccgagatg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 agagggcaggaggtctatgtgaaggttgccgatccactgggctacaacatcaccgagatg 308 Query: 129 gtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 gtcgtcccggacaatgccctctactgtggtctactgaaggagaggcaaaag 257 Score = 278 bits (140), Expect = 7e-73 Identities = 161/171 (94%) Strand = Plus / Minus Query: 179 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 112 Query: 239 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctct 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctct 52 Query: 299 cnnnnnnnnnctccaaagttttttggtagatttttgcctagaggaaataga 349 | ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 51 ctttttttttctccaaagttttttggttgatttttgcctagaggaaataga 1 >gi|47103953|gb|BV154496.1| PZA02404-71925-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 369 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 310 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 250 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 249 ctctactgtggtctactgaaggagaggcaaaag 217 Score = 232 bits (117), Expect = 3e-59 Identities = 120/121 (99%) Strand = Plus / Minus Query: 179 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 72 Query: 239 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctct 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 71 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgattctctct 12 Query: 299 c 299 | Sbjct: 11 c 11 >gi|47103952|gb|BV154495.1| PZA02404-71934-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 213 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 154 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 94 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 93 ctctactgtggtctactgaaggagaggcaaaag 61 >gi|47103951|gb|BV154494.1| PZA02404-71936-NC7A Zea mays NC7A Zea mays STS genomic, sequence tagged site Length = 193 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 134 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 74 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 73 ctctactgtggtctactgaaggagaggcaaaag 41 >gi|47103950|gb|BV154493.1| PZA02404-71924-Mp708 Zea mays Mp708 Zea mays STS genomic, sequence tagged site Length = 371 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 312 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 252 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 251 ctctactgtggtctactgaaggagaggcaaaag 219 Score = 232 bits (117), Expect = 3e-59 Identities = 120/121 (99%) Strand = Plus / Minus Query: 179 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 74 Query: 239 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgatcctctct 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 73 ccgactcctcgcaaccatgatcctggtcgtcgcagctgtgatcttcagttgattctctct 14 Query: 299 c 299 | Sbjct: 13 c 13 >gi|47103949|gb|BV154492.1| PZA02404-71933-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 213 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 154 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 94 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 93 ctctactgtggtctactgaaggagaggcaaaag 61 >gi|47103947|gb|BV154490.1| PZA02404-71926-IHO Zea mays IHO Zea mays STS genomic, sequence tagged site Length = 240 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 181 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 121 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 120 ctctactgtggtctactgaaggagaggcaaaag 88 >gi|47103945|gb|BV154488.1| PZA02404-71923-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 240 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 181 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 121 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 120 ctctactgtggtctactgaaggagaggcaaaag 88 >gi|47103944|gb|BV154487.1| PZA02404-71921-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 188 Score = 303 bits (153), Expect = 1e-80 Identities = 153/153 (100%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 129 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 69 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 68 ctctactgtggtctactgaaggagaggcaaaag 36 >gi|47103954|gb|BV154497.1| PZA02404-71937-W22_R-scm2 Zea mays W22_R-scm2 Zea mays STS genomic, sequence tagged site Length = 300 Score = 295 bits (149), Expect = 3e-78 Identities = 152/153 (99%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 86 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggtgtctggaatcttcgcgccgaaaggctggatgactggtacagagggcaggaggtctat 241 Query: 87 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgcc 181 Query: 147 ctctactgtggtctactgaaggagaggcaaaag 179 ||||||||||||||||||||||||||||||||| Sbjct: 180 ctctactgtggtctactgaaggagaggcaaaag 148 Score = 123 bits (62), Expect = 2e-26 Identities = 62/62 (100%) Strand = Plus / Minus Query: 179 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 gccacaggttcatgagtcgaacagcaagtcgtcggcgcaaggcgatgctggatggagcaa 3 Query: 239 cc 240 || Sbjct: 2 cc 1 >gi|47103948|gb|BV154491.1| PZA02404-71938-ILO Zea mays ILO Zea mays STS genomic, sequence tagged site Length = 248 Score = 289 bits (146), Expect = 2e-76 Identities = 153/154 (99%), Gaps = 1/154 (0%) Strand = Plus / Minus Query: 27 ggtgtctggaatctgcgcgccgaaaggctggatgactggtaca-gagggcaggaggtcta 85 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 248 ggtgtctggaatctgcgcgccgaaaggctggatgactggtacaagagggcaggaggtcta 189 Query: 86 tgtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tgtgaaggttgccgatccactgggctacaacatcaccgagatggtcgtcccggacaatgc 129 Query: 146 cctctactgtggtctactgaaggagaggcaaaag 179 |||||||||||||||||||||||||||||||||| Sbjct: 128 cctctactgtggtctactgaaggagaggcaaaag 95 >gi|76925370|gb|DV170404.1|DV170404 ZM_BFb0169O11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 846 Score = 127 bits (64), Expect = 1e-27 Identities = 67/68 (98%) Strand = Plus / Plus Query: 1 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatg 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 779 cggtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaagggtggatg 838 Query: 61 actggtac 68 |||||||| Sbjct: 839 actggtac 846 >gi|67023356|gb|CO452105.1|CO452105 MZCCL10172G06.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 770 Score = 117 bits (59), Expect = 1e-24 Identities = 65/67 (97%) Strand = Plus / Plus Query: 3 gtcctagtctcgctcgacaacgttggtgtctggaatctgcgcgccgaaaggctggatgac 62 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 698 gtcctagtctcgctcgacaacgttggtgtctgggatctgcgcgccgaaaagctggatgac 757 Query: 63 tggtaca 69 ||||||| Sbjct: 758 tggtaca 764 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 160,933 Number of Sequences: 836351 Number of extensions: 160933 Number of successful extensions: 10690 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 10657 Number of HSP's gapped (non-prelim): 32 length of query: 510 length of database: 669,372,029 effective HSP length: 19 effective length of query: 491 effective length of database: 653,481,360 effective search space: 320859347760 effective search space used: 320859347760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)