BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2405087.2.1 (737 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|91056049|gb|EB166467.1|EB166467 ZM_BFb0348H16.r ZM_BFb Zea ma... 1162 0.0 gi|4681197|gb|AI629867.1|AI629867 486041C11.x2 486 - leaf primor... 932 0.0 gi|14332757|gb|G71072.1|G71072 A62986734FB73 maize leaf DNA Zea ... 686 0.0 gi|14333657|gb|G71972.1|G71972 A62986734FMo17 maize leaf DNA Zea... 658 0.0 gi|21212675|gb|AY109213.1| Zea mays PCO089295 mRNA sequence 583 e-164 gi|21212675|gb|AY109213.1| Zea mays PCO089295 mRNA sequence 583 e-164 gi|4573101|gb|AI586750.1|AI586750 486060C09.x1 486 - leaf primor... 579 e-163 gi|12971893|gb|BG267710.1|BG267710 1000136E05.x3 1000 - Unigene ... 488 e-136 gi|60347019|gb|DN213992.1|DN213992 MEST990_C04.T7-1 UGA-ZmSAM-XZ... 333 2e-89 gi|32932834|gb|CF037646.1|CF037646 QCH10d07.yg QCH Zea mays cDNA... 283 2e-74 gi|37394651|gb|CF634601.1|CF634601 zmrww00_0A10-015-a10.s1 zmrww... 268 9e-70 gi|4647128|gb|AI622203.1|AI622203 486037F07.x2 486 - leaf primor... 178 7e-43 gi|32825584|gb|CD965306.1|CD965306 SEJ_194 GeneTag2 Zea mays cDN... 174 1e-41 gi|6020299|gb|AW065212.1|AW065212 614038C04.y2 614 - root cDNA l... 170 2e-40 gi|60348317|gb|DN215290.1|DN215290 MEST913_A12.T7-1 UGA-ZmSAM-XZ... 163 4e-38 gi|71773906|gb|DR971796.1|DR971796 ZM_BFb0094K10.f ZM_BFb Zea ma... 147 2e-33 gi|60340879|gb|DN207852.1|DN207852 MEST861_H02.T7-1 UGA-ZmSAM-XZ... 137 2e-30 gi|71773907|gb|DR971797.1|DR971797 ZM_BFb0094K10.r ZM_BFb Zea ma... 133 3e-29 gi|67011428|gb|CO440177.1|CO440177 MZCCL10016G07.g Maize Endospe... 131 1e-28 gi|21213163|gb|AY109442.1| Zea mays CL30224_1 mRNA sequence 96 8e-18 gi|21213163|gb|AY109442.1| Zea mays CL30224_1 mRNA sequence 96 8e-18 gi|6827526|gb|AW331169.1|AW331169 707048D02.x1 707 - Mixed adult... 88 2e-15 gi|12046172|gb|BF728311.1|BF728311 1000060E03.x1 1000 - Unigene ... 88 2e-15 gi|71435051|gb|DR816101.1|DR816101 ZM_BFb0047B11.r ZM_BFb Zea ma... 88 2e-15 gi|71441093|gb|DR822143.1|DR822143 ZM_BFb0062D23.r ZM_BFb Zea ma... 88 2e-15 gi|78179457|gb|DV549830.1|DV549830 1000060-E04.GAD10-F UGI-Reseq... 88 2e-15 gi|78179632|gb|DV550005.1|DV550005 1000060-E03.GAD10-F UGI-Reseq... 88 2e-15 gi|71441092|gb|DR822142.1|DR822142 ZM_BFb0062D23.f ZM_BFb Zea ma... 56 7e-06 gi|58029442|gb|CX724869.1|CX724869 EST5009 Zea mays embryo sac c... 46 0.006 gi|6626371|gb|AW257903.1|AW257903 687063G10.y1 687 - Early embry... 38 1.5 gi|32857860|gb|CD997541.1|CD997541 QBD8e11.xg QBD Zea mays cDNA ... 38 1.5 gi|40333903|gb|CK367973.1|CK367973 zmrws055_0A10-002-f01.s0 zmrw... 38 1.5 gi|60347549|gb|DN214522.1|DN214522 MEST860_B01.T7-1 UGA-ZmSAM-XZ... 38 1.5 gi|67012760|gb|CO441509.1|CO441509 MZCCL10032F04.g Maize Endospe... 38 1.5 gi|21213156|gb|AY109435.1| Zea mays CL790_1 mRNA sequence 38 1.5 gi|21213156|gb|AY109435.1| Zea mays CL790_1 mRNA sequence 38 1.5 gi|48717678|gb|AC146976.5| Zea mays clone ZMMBBb0356L13, *** SEQ... 38 1.5 gi|60341430|gb|DN208403.1|DN208403 MEST869_H01.T7-1 UGA-ZmSAM-XZ... 36 6.0 gi|67029135|gb|CO457884.1|CO457884 MZCCL20015F11.g Maize Endospe... 36 6.0 gi|86471133|gb|DY237503.1|DY237503 ZM_BFb0254K18.r ZM_BFb Zea ma... 36 6.0 gi|91630496|gb|AC185109.1| Zea mays chromosome UNK clone ZMMBBb-... 36 6.0 >gi|91056049|gb|EB166467.1|EB166467 ZM_BFb0348H16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 762 Score = 1162 bits (586), Expect = 0.0 Identities = 589/590 (99%) Strand = Plus / Plus Query: 1 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 232 Query: 61 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 292 Query: 121 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 352 Query: 181 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 412 Query: 241 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaatacattcact 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaatacattcact 472 Query: 301 gctactatctggaggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 gctactatctggaggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 532 Query: 361 taacatttactatccttcacattccagagaaacgtcaaacaactccaagattacatttgc 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 533 taacatttactatccttcacattccggagaaacgtcaaacaactccaagattacatttgc 592 Query: 421 attagatcaaaatcaccagtcacatattgagtatcgttggggaggagaaggcctaaggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 attagatcaaaatcaccagtcacatattgagtatcgttggggaggagaaggcctaaggaa 652 Query: 481 atatcttgtgaagtgggccacttcagtggtagaaagaaagggaagaacagagagacaaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 atatcttgtgaagtgggccacttcagtggtagaaagaaagggaagaacagagagacaaat 712 Query: 541 tatttttgaagatccagagcactcttcggcgtattgtcttgcatttagag 590 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 tatttttgaagatccagagcactcttcggcgtattgtcttgcatttagag 762 >gi|4681197|gb|AI629867.1|AI629867 486041C11.x2 486 - leaf primordia cDNA library from Hake lab Zea mays cDNA, mRNA sequence Length = 491 Score = 932 bits (470), Expect = 0.0 Identities = 473/474 (99%) Strand = Plus / Minus Query: 38 tggcctgaacattgcaagaattacctgtcaaggatactaactcttggcccaaggtctcct 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 tggcctgaacattgcaagaattacctgtcaaggatactaactcttggcccaaggtctcct 432 Query: 98 gctattggtaacagagaggagcggagtaatacacctatttcaggaaggaagaatatcatt 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gctattggtaacagagaggagcggagtaatacacctatttcaggaaggaagaatatcatt 372 Query: 158 gttatttctgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctatt 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gttatttctgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctatt 312 Query: 218 gaggtcatacataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttcctta 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gaggtcatacataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttcctta 252 Query: 278 acgatatcagaaatacattcactgctactatctggaggcatgcttcccactgattttgat 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 acgatatcagaaatacattcactgctactatctggaggcatgcttcccactgattttgat 192 Query: 338 gctttcatctgcaatagtgggagtaacatttactatccttcacattccagagaaacgtca 397 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 191 gctttcatctgcaatagtgggagtaacatttactatccttcacattccggagaaacgtca 132 Query: 398 aacaactccaagattacatttgcattagatcaaaatcaccagtcacatattgagtatcgt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 aacaactccaagattacatttgcattagatcaaaatcaccagtcacatattgagtatcgt 72 Query: 458 tggggaggagaaggcctaaggaaatatcttgtgaagtgggccacttcagtggta 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71 tggggaggagaaggcctaaggaaatatcttgtgaagtgggccacttcagtggta 18 >gi|14332757|gb|G71072.1|G71072 A62986734FB73 maize leaf DNA Zea mays STS genomic, sequence tagged site Length = 352 Score = 686 bits (346), Expect = 0.0 Identities = 349/350 (99%) Strand = Plus / Minus Query: 106 taacagagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 taacagagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttc 293 Query: 166 tgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 tgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcat 233 Query: 226 acataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 acataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatc 173 Query: 286 agaaatacattcactgctactatctggaggcatgcttcccactgattttgatgctttcat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 agaaatacattcactgctactatctggaggcatgcttcccactgattttgatgctttcat 113 Query: 346 ctgcaatagtgggagtaacatttactatccttcacattccagagaaacgtcaaacaactc 405 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112 ctgcaatagtgggagtaacatttactatccttcacattccggagaaacgtcaaacaactc 53 Query: 406 caagattacatttgcattagatcaaaatcaccagtcacatattgagtatc 455 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52 caagattacatttgcattagatcaaaatcaccagtcacatattgagtatc 3 >gi|14333657|gb|G71972.1|G71972 A62986734FMo17 maize leaf DNA Zea mays STS genomic, sequence tagged site Length = 337 Score = 658 bits (332), Expect = 0.0 Identities = 335/336 (99%) Strand = Plus / Minus Query: 106 taacagagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 taacagagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttc 278 Query: 166 tgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tgtagactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcat 218 Query: 226 acataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 acataaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatc 158 Query: 286 agaaatacattcactgctactatctggaggcatgcttcccactgattttgatgctttcat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 agaaatacattcactgctactatctggaggcatgcttcccactgattttgatgctttcat 98 Query: 346 ctgcaatagtgggagtaacatttactatccttcacattccagagaaacgtcaaacaactc 405 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 97 ctgcaatagtgggagtaacatttactatccttcacattccggagaaacgtcaaacaactc 38 Query: 406 caagattacatttgcattagatcaaaatcaccagtc 441 |||||||||||||||||||||||||||||||||||| Sbjct: 37 caagattacatttgcattagatcaaaatcaccagtc 2 >gi|21212675|gb|AY109213.1| Zea mays PCO089295 mRNA sequence Length = 620 Score = 583 bits (294), Expect = e-164 Identities = 311/314 (99%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 1 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 368 Query: 61 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 428 Query: 121 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 488 Query: 181 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 548 Query: 241 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaatacattcact 300 |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 549 gtcggg-tcaactggttgtgtgctgt-aacttccttaacgatatcagaaatacattcact 606 Query: 301 gctactatctggag 314 |||||||||||||| Sbjct: 607 gctactatctggag 620 >gi|21212675|gb|AY109213.1| Zea mays PCO089295 mRNA sequence Length = 620 Score = 583 bits (294), Expect = e-164 Identities = 311/314 (99%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 1 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 368 Query: 61 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 428 Query: 121 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 488 Query: 181 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 548 Query: 241 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaatacattcact 300 |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 549 gtcggg-tcaactggttgtgtgctgt-aacttccttaacgatatcagaaatacattcact 606 Query: 301 gctactatctggag 314 |||||||||||||| Sbjct: 607 gctactatctggag 620 >gi|4573101|gb|AI586750.1|AI586750 486060C09.x1 486 - leaf primordia cDNA library from Hake lab Zea mays cDNA, mRNA sequence Length = 292 Score = 579 bits (292), Expect = e-163 Identities = 292/292 (100%) Strand = Plus / Minus Query: 1 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 cagagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaatta 233 Query: 61 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 cctgtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcg 173 Query: 121 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gagtaatacacctatttcaggaaggaagaatatcattgttatttctgtagactctgttaa 113 Query: 181 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112 caaggaaggtctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacat 53 Query: 241 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaata 292 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52 gtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaata 1 >gi|12971893|gb|BG267710.1|BG267710 1000136E05.x3 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 246 Score = 488 bits (246), Expect = e-136 Identities = 246/246 (100%) Strand = Plus / Minus Query: 50 tgcaagaattacctgtcaaggatactaactcttggcccaaggtctcctgctattggtaac 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 tgcaagaattacctgtcaaggatactaactcttggcccaaggtctcctgctattggtaac 187 Query: 110 agagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttctgta 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 agagaggagcggagtaatacacctatttcaggaaggaagaatatcattgttatttctgta 127 Query: 170 gactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcatacat 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gactctgttaacaaggaaggtctagtcaggataatcagaaatgctattgaggtcatacat 67 Query: 230 aaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 aaagaaaacatgtcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaa 7 Query: 290 atacat 295 |||||| Sbjct: 6 atacat 1 >gi|60347019|gb|DN213992.1|DN213992 MEST990_C04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 741 Score = 333 bits (168), Expect = 2e-89 Identities = 185/188 (98%), Gaps = 2/188 (1%) Strand = Plus / Minus Query: 552 atccagagcactcttcgg-cgtattgtcttgcatttagagtggttaatccc-aatcatct 609 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 741 atccagagcactcttcgggcgtattgtcttgcatttagagtggttaatccccaatcatct 682 Query: 610 tcctcctttaaaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcatt 669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 tcctcctttaaaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcatt 622 Query: 670 atataaccacagcgctaccagattatctgtagtccctatccacgcatcacgctctcaggc 729 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 atataaccacagcgctaccagattatctgtagtccctatccacgcatcacgctctcaggc 562 Query: 730 tctaaggt 737 ||||||| Sbjct: 561 cctaaggt 554 >gi|32932834|gb|CF037646.1|CF037646 QCH10d07.yg QCH Zea mays cDNA clone QCH10d07, mRNA sequence Length = 243 Score = 283 bits (143), Expect = 2e-74 Identities = 149/151 (98%) Strand = Plus / Plus Query: 242 tcgggttcaactggttttgtgctgtcaacttccttaacgatatcagaaatacattcactg 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 93 tcgggttcaactggttttgtgctgtcaacttccttaacgatatcagagatacattcactg 152 Query: 302 ctactatctggaggcatgcttcccactgattttgatgctttcatctgcaatagtgggagt 361 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 ctactatctggaggtatgcttcccactgattttgatgctttcatctgcaatagtgggagt 212 Query: 362 aacatttactatccttcacattccagagaaa 392 ||||||||||||||||||||||||||||||| Sbjct: 213 aacatttactatccttcacattccagagaaa 243 Score = 167 bits (84), Expect = 2e-39 Identities = 84/84 (100%) Strand = Plus / Plus Query: 64 gtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcggag 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 gtcaaggatactaactcttggcccaaggtctcctgctattggtaacagagaggagcggag 68 Query: 124 taatacacctatttcaggaaggaa 147 |||||||||||||||||||||||| Sbjct: 69 taatacacctatttcaggaaggaa 92 >gi|37394651|gb|CF634601.1|CF634601 zmrww00_0A10-015-a10.s1 zmrww00 Zea mays cDNA 3', mRNA sequence Length = 689 Score = 268 bits (135), Expect = 9e-70 Identities = 138/139 (99%) Strand = Plus / Minus Query: 599 cccaatcatcttcctcctttaaaggagttgaggaagttgatgagaatccaatctctccgt 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 cccaatcatcttcctcctttaaaggagttgaggaagttgatgagaatccaatctctccgt 619 Query: 659 tgcaatgcattatataaccacagcgctaccagattatctgtagtccctatccacgcatca 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 tgcaatgcattatataaccacagcgctaccagattatctgtagtccctatccacgcatca 559 Query: 719 cgctctcaggctctaaggt 737 ||||||||||| ||||||| Sbjct: 558 cgctctcaggccctaaggt 540 >gi|4647128|gb|AI622203.1|AI622203 486037F07.x2 486 - leaf primordia cDNA library from Hake lab Zea mays cDNA, mRNA sequence Length = 101 Score = 178 bits (90), Expect = 7e-43 Identities = 100/102 (98%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 351 atagtgggagtaacatttactatccttcacattccagagaaacgtcaaacaactccaaga 410 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 101 atagtgggagtaacatttactatccttcacattccggagaaacgtcaaacaactccaaga 42 Query: 411 ttacatttgcattagatcaaaatcaccagtcacatattgagt 452 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 41 ttacatttgcattagatcaaaatc-ccagtcacatattgagt 1 >gi|32825584|gb|CD965306.1|CD965306 SEJ_194 GeneTag2 Zea mays cDNA, mRNA sequence Length = 90 Score = 174 bits (88), Expect = 1e-41 Identities = 88/88 (100%) Strand = Plus / Minus Query: 190 tctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacatgtcgggttc 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 tctagtcaggataatcagaaatgctattgaggtcatacataaagaaaacatgtcgggttc 29 Query: 250 aactggttttgtgctgtcaacttcctta 277 |||||||||||||||||||||||||||| Sbjct: 28 aactggttttgtgctgtcaacttcctta 1 >gi|6020299|gb|AW065212.1|AW065212 614038C04.y2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 611 Score = 170 bits (86), Expect = 2e-40 Identities = 245/298 (82%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 |||||||||||||||||||||||||||||||| ||||||| || | || |||||||| Sbjct: 101 tcacatattgagtatcgttggggaggagaaggtttaaggaagtacttagttaagtgggct 160 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||||| || | ||| | || ||||||||| | || Sbjct: 161 tcttcagtagtagaaagaagggggagaactgaaaagcaagtcatctttgaagattcggaa 220 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 221 cactcttcaacatattgtcttgcatttagagtggttaatccaaatcatttgcctcctttg 280 Query: 620 aaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcattatataaccac 679 |||||| || ||||||||||||||||| || || ||||| |||| | |||||||| Sbjct: 281 aaggagctgcaaaagttgatgagaatccagtcactgcgttgtcatgctctgtataaccat 340 Query: 680 agcgctaccagattatctgtagtccctatccacgcatcacgctctcaggctctaaggt 737 |||| ||||| |||||||| | || || || ||||| || |||||||||||||||| Sbjct: 341 ggcgccaccaggctatctgtaattccaatgcatgcatcgcgatctcaggctctaaggt 398 >gi|60348317|gb|DN215290.1|DN215290 MEST913_A12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 163 bits (82), Expect = 4e-38 Identities = 244/298 (81%) Strand = Plus / Minus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 |||||||| ||||||||||||||||||||||| ||||||| || | || |||||||| Sbjct: 680 tcacatatcgagtatcgttggggaggagaaggtttaaggaagtacttagttaagtgggct 621 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||||| || | ||| | || ||||||||| | || Sbjct: 620 tcttcagtagtagaaagaagggggagaactgaaaagcaagtcatctttgaagattcggaa 561 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 560 cactcttcaacatattgtcttgcatttagagtggttaatccaaatcatttgcctcctttg 501 Query: 620 aaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcattatataaccac 679 |||||| || ||||||||||||||||| || || ||||| |||| | |||||||| Sbjct: 500 aaggagctgcaaaagttgatgagaatccagtcactgcgttgtcatgctctgtataaccat 441 Query: 680 agcgctaccagattatctgtagtccctatccacgcatcacgctctcaggctctaaggt 737 |||| ||||| |||||||| | || || || ||||| || |||||||||||||||| Sbjct: 440 ggcgccaccaggctatctgtaattccaatgcatgcatcgcgatctcaggctctaaggt 383 >gi|71773906|gb|DR971796.1|DR971796 ZM_BFb0094K10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 808 Score = 147 bits (74), Expect = 2e-33 Identities = 242/298 (81%) Strand = Plus / Minus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 ||||||||||||||||||||||| |||||||| ||||||| || | || ||||||||| Sbjct: 669 tcacatattgagtatcgttggggtggagaaggtttaaggaagtacttagttaagtgggcc 610 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||| | || | ||| | || ||||||||| | || Sbjct: 609 tcttcagtagtagaaagaagggggagagccgaaaagcaagtcatctttgaagattcggaa 550 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | |||||||||||||||| |||| ||||||| | |||| | |||||||| Sbjct: 549 cactcttcaacatattgtcttgcatttaaagtgattaatccaagtcatttgcctcctttg 490 Query: 620 aaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcattatataaccac 679 |||||| || || |||||||||||||| || || ||||| ||||| | |||||||| Sbjct: 489 aaggagctgcaaaaattgatgagaatccagtcactgcgttgtcatgcactgtataaccat 430 Query: 680 agcgctaccagattatctgtagtccctatccacgcatcacgctctcaggctctaaggt 737 |||| ||||| ||||||||| | || || || ||||| || |||||||||||||||| Sbjct: 429 ggcgccaccaggttatctgtaattccaattcatgcatcgcgatctcaggctctaaggt 372 Score = 46.1 bits (23), Expect = 0.006 Identities = 47/55 (85%) Strand = Plus / Minus Query: 327 ctgattttgatgctttcatctgcaatagtgggagtaacatttactatccttcaca 381 |||| |||||||| || || ||||||||||||||| |||| || ||||| ||||| Sbjct: 782 ctgactttgatgcctttatatgcaatagtgggagtgacatatattatccatcaca 728 >gi|60340879|gb|DN207852.1|DN207852 MEST861_H02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 482 Score = 137 bits (69), Expect = 2e-30 Identities = 213/261 (81%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 ||||||||||||||||||||||| |||||||| ||||||| || | || ||||||||| Sbjct: 202 tcacatattgagtatcgttggggtggagaaggtttaaggaagtacttagttaagtgggcc 261 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||||| || | ||| | || ||||||||| | || Sbjct: 262 tcttcagtagtagaaagaagggggagaaccgaaaagcaagtcatctttgaagattcggaa 321 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | |||||||||||||||| |||| ||||||| | |||| | |||||||| Sbjct: 322 cactcttcaacatattgtcttgcatttaaagtgattaatccaagtcatttgcctcctttg 381 Query: 620 aaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcattatataaccac 679 |||||| || || |||||||||||||| || || ||||| ||||| | |||||||| Sbjct: 382 aaggagctgcaaaaattgatgagaatccagtcactgcgttgtcatgcactgtataaccat 441 Query: 680 agcgctaccagattatctgta 700 |||| ||||| ||||||||| Sbjct: 442 ggcgccaccaggttatctgta 462 Score = 58.0 bits (29), Expect = 2e-06 Identities = 59/69 (85%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggagtaacatttacta 372 ||||||||| || ||||| |||||||| || || ||||||||||||||| |||| || || Sbjct: 75 aggcatgctccctactgactttgatgcctttatatgcaatagtgggagtgacatatatta 134 Query: 373 tccttcaca 381 ||| ||||| Sbjct: 135 tccatcaca 143 >gi|71773907|gb|DR971797.1|DR971797 ZM_BFb0094K10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 775 Score = 133 bits (67), Expect = 3e-29 Identities = 239/295 (81%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 ||||||||||||||||||||||| |||||||| ||||||| || | || ||||||||| Sbjct: 441 tcacatattgagtatcgttggggtggagaaggtttaaggaagtacttagttaagtgggcc 500 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||||| || | ||| | || ||||||||| | || Sbjct: 501 tcttcagtagtagaaagaagggggagaaccgaaaagcaagtcatctttgaagattcggaa 560 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | |||||||||||||||| |||| ||||||| | |||| | |||||||| Sbjct: 561 cactcttcaacatattgtcttgcatttaaagtgattaatccaagtcatttgcctcctttg 620 Query: 620 aaggagttgaggaagttgatgagaatccaatctctccgttgcaatgcattatataaccac 679 |||||| || || |||||||||||||| || || ||||| ||||| | |||||||| Sbjct: 621 aaggagctgcaaaaattgatgagaatccagtcactgcgttgtcatgcactgtataaccat 680 Query: 680 agcgctaccagattatctgtagtccctatccacgcatcacgctctcaggctctaa 734 |||| | ||| ||||||||| | || || || ||||| || ||||||||||||| Sbjct: 681 ggcgcca-caggttatctgtaattccaattcatgcatcgcgatctcaggctctaa 734 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 ||||||||||| | | |||||| ||||| || || |||||||||||||||||||||||| Sbjct: 7 gagagaatggattaaaaaatatacaccagttttcttggcctgaacattgcaagaattact 66 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| ||||||| || ||||| Sbjct: 67 tgtcaaggatattaactctaggtccaag 94 Score = 58.0 bits (29), Expect = 2e-06 Identities = 59/69 (85%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggagtaacatttacta 372 ||||||||| || ||||| |||||||| || || ||||||||||||||| |||| || || Sbjct: 314 aggcatgctccctactgactttgatgcctttatatgcaatagtgggagtgacatatatta 373 Query: 373 tccttcaca 381 ||| ||||| Sbjct: 374 tccatcaca 382 Score = 46.1 bits (23), Expect = 0.006 Identities = 29/31 (93%) Strand = Plus / Plus Query: 158 gttatttctgtagactctgttaacaaggaag 188 |||||| |||||||||| ||||||||||||| Sbjct: 159 gttattgctgtagactccgttaacaaggaag 189 >gi|67011428|gb|CO440177.1|CO440177 MZCCL10016G07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 814 Score = 131 bits (66), Expect = 1e-28 Identities = 173/209 (82%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaaatatcttgtgaagtgggcc 499 |||||||| ||||||||||||||||||||||| ||||||| || | || |||||||| Sbjct: 488 tcacatatcgagtatcgttggggaggagaaggtttaaggaagtacttagttaagtgggct 547 Query: 500 acttcagtggtagaaagaaagggaagaacagagagacaaattatttttgaagatccagag 559 ||||||| |||||||||| ||| ||||| || | ||| | || ||||||||| | || Sbjct: 548 tcttcagtagtagaaagaagggggagaactgaaaagcaagtcatctttgaagattcggaa 607 Query: 560 cactcttcggcgtattgtcttgcatttagagtggttaatcccaatcatcttcctccttta 619 |||||||| | ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 608 cactcttcaacatattgtcttgcatttagagtggttaatccaaatcatttgcctcctttt 667 Query: 620 aaggagttgaggaagttgatgagaatcca 648 | ||| || ||||||||||||||||| Sbjct: 668 gaagagctgcanaagttgatgagaatcca 696 Score = 73.8 bits (37), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 26 caccaattctcgtggcctgaacattgcaagaattacctgtcaaggatactaactcttggc 85 |||||||| || |||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 77 caccaattttcttggcctgaacattgcaagaattacttgtcaaggatatcaagtcttggt 136 Query: 86 ccaag 90 ||||| Sbjct: 137 ccaag 141 Score = 48.1 bits (24), Expect = 0.002 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 361 aggcatgctcccgactgactttgatgcctttatatgcaatagtgggag 408 Score = 48.1 bits (24), Expect = 0.002 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||||||||||| Sbjct: 213 ctgtagactctgttaacaaggaag 236 Score = 46.1 bits (23), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||||||||| Sbjct: 287 atgtcaggttctacaggttttgtgctgtcaacttc 321 >gi|21213163|gb|AY109442.1| Zea mays CL30224_1 mRNA sequence Length = 1735 Score = 95.6 bits (48), Expect = 8e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 545 tttgaagatccagagcactcttcggcgtattgtcttgcatttagagtggttaatcccaat 604 ||||||||| | || |||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 983 tttgaagattcggaacactcttcaacatattgtcttgcatttagagtggttaatccaaat 924 Query: 605 catcttcctcctttaaaggagttgaggaagttgatgagaatcca 648 ||| | |||||||| |||||| || ||||||||||||||||| Sbjct: 923 catttgcctcctttgaaggagctgcaaaagttgatgagaatcca 880 Score = 73.8 bits (37), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Minus Query: 26 caccaattctcgtggcctgaacattgcaagaattacctgtcaaggatactaactcttggc 85 |||||||| || |||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 1499 caccaattttcttggcctgaacattgcaagaattacttgtcaaggatatcaagtcttggt 1440 Query: 86 ccaag 90 ||||| Sbjct: 1439 ccaag 1435 Score = 65.9 bits (33), Expect = 7e-09 Identities = 39/41 (95%) Strand = Plus / Minus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaa 480 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1088 tcacatattgagtatcgttggggaggagaaggtttaaggaa 1048 Score = 40.1 bits (20), Expect = 0.39 Identities = 41/48 (85%) Strand = Plus / Minus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || ||||||||||||| Sbjct: 1215 aggcatgctcccgactgactttgatgcctttatgggcaatagtgggag 1168 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Minus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 1289 atgtcaggttctacaggttttgtgctgtctacttc 1255 >gi|21213163|gb|AY109442.1| Zea mays CL30224_1 mRNA sequence Length = 1735 Score = 95.6 bits (48), Expect = 8e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 545 tttgaagatccagagcactcttcggcgtattgtcttgcatttagagtggttaatcccaat 604 ||||||||| | || |||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 983 tttgaagattcggaacactcttcaacatattgtcttgcatttagagtggttaatccaaat 924 Query: 605 catcttcctcctttaaaggagttgaggaagttgatgagaatcca 648 ||| | |||||||| |||||| || ||||||||||||||||| Sbjct: 923 catttgcctcctttgaaggagctgcaaaagttgatgagaatcca 880 Score = 73.8 bits (37), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Minus Query: 26 caccaattctcgtggcctgaacattgcaagaattacctgtcaaggatactaactcttggc 85 |||||||| || |||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 1499 caccaattttcttggcctgaacattgcaagaattacttgtcaaggatatcaagtcttggt 1440 Query: 86 ccaag 90 ||||| Sbjct: 1439 ccaag 1435 Score = 65.9 bits (33), Expect = 7e-09 Identities = 39/41 (95%) Strand = Plus / Minus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaa 480 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1088 tcacatattgagtatcgttggggaggagaaggtttaaggaa 1048 Score = 40.1 bits (20), Expect = 0.39 Identities = 41/48 (85%) Strand = Plus / Minus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || ||||||||||||| Sbjct: 1215 aggcatgctcccgactgactttgatgcctttatgggcaatagtgggag 1168 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Minus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 1289 atgtcaggttctacaggttttgtgctgtctacttc 1255 >gi|6827526|gb|AW331169.1|AW331169 707048D02.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 668 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 |||| |||||| ||| |||||| |||||||| || |||||||||||||||||||||||| Sbjct: 216 gagaaaatggattgaaaaatatacaccaattttcttggcctgaacattgcaagaattact 275 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| || |||||| ||||| Sbjct: 276 tgtcaaggatatcaagtcttggtccaag 303 Score = 48.1 bits (24), Expect = 0.002 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 523 aggcatgctcccgactgactttgatgcctttatatgcaatagtgggag 570 Score = 40.1 bits (20), Expect = 0.39 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||| ||||||| Sbjct: 375 ctgtagactctgttaaaaaggaag 398 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgtt 458 ||||||||||||||||||| Sbjct: 650 tcacatattgagtatcgtt 668 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 449 atgtcaggttctacaggttttgtgctgtctacttc 483 >gi|12046172|gb|BF728311.1|BF728311 1000060E03.x1 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 567 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 |||| |||||| ||| |||||| |||||||| || |||||||||||||||||||||||| Sbjct: 192 gagaaaatggattgaaaaatatacaccaattttcttggcctgaacattgcaagaattact 251 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| || |||||| ||||| Sbjct: 252 tgtcaaggatatcaagtcttggtccaag 279 Score = 48.1 bits (24), Expect = 0.002 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 499 aggcatgctcccgactgactttgatgcctttatatgcaatagtgggag 546 Score = 40.1 bits (20), Expect = 0.39 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||| ||||||| Sbjct: 351 ctgtagactctgttaaaaaggaag 374 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 425 atgtcaggttctacaggttttgtgctgtctacttc 459 >gi|71435051|gb|DR816101.1|DR816101 ZM_BFb0047B11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 565 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 ||||||||||| | | |||||| ||||| || || |||||||||||||||||||||||| Sbjct: 377 gagagaatggattaaaaaatatacaccagttttcttggcctgaacattgcaagaattact 436 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| ||||||| || ||||| Sbjct: 437 tgtcaaggatattaactctaggtccaag 464 Score = 42.1 bits (21), Expect = 0.098 Identities = 27/29 (93%) Strand = Plus / Plus Query: 159 ttatttctgtagactctgttaacaaggaa 187 ||||| |||||||||| |||||||||||| Sbjct: 530 ttattgctgtagactccgttaacaaggaa 558 >gi|71441093|gb|DR822143.1|DR822143 ZM_BFb0062D23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 649 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 |||| |||||| ||| |||||| |||||||| || |||||||||||||||||||||||| Sbjct: 176 gagaaaatggattgaaaaatatacaccaattttcttggcctgaacattgcaagaattact 235 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| || |||||| ||||| Sbjct: 236 tgtcaaggatatcaagtcttggtccaag 263 Score = 56.0 bits (28), Expect = 7e-06 Identities = 31/32 (96%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaagg 471 |||||||| ||||||||||||||||||||||| Sbjct: 610 tcacatatcgagtatcgttggggaggagaagg 641 Score = 48.1 bits (24), Expect = 0.002 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 483 aggcatgctcccgactgactttgatgcctttatatgcaatagtgggag 530 Score = 48.1 bits (24), Expect = 0.002 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||||||||||| Sbjct: 335 ctgtagactctgttaacaaggaag 358 Score = 46.1 bits (23), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||||||||| Sbjct: 409 atgtcaggttctacaggttttgtgctgtcaacttc 443 >gi|78179457|gb|DV549830.1|DV549830 1000060-E04.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 713 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 |||| |||||| ||| |||||| |||||||| || |||||||||||||||||||||||| Sbjct: 218 gagaaaatggattgaaaaatatacaccaattttcttggcctgaacattgcaagaattact 277 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| || |||||| ||||| Sbjct: 278 tgtcaaggatatcaagtcttggtccaag 305 Score = 52.0 bits (26), Expect = 1e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaa 469 |||||||||||||||||||||||| ||||| Sbjct: 652 tcacatattgagtatcgttggggacgagaa 681 Score = 40.1 bits (20), Expect = 0.39 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||| ||||||| Sbjct: 377 ctgtagactctgttaaaaaggaag 400 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 451 atgtcaggttctacaggttttgtgctgtctacttc 485 >gi|78179632|gb|DV550005.1|DV550005 1000060-E03.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 718 Score = 87.7 bits (44), Expect = 2e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 3 gagagaatggactgacaaatattcaccaattctcgtggcctgaacattgcaagaattacc 62 |||| |||||| ||| |||||| |||||||| || |||||||||||||||||||||||| Sbjct: 219 gagaaaatggattgaaaaatatacaccaattttcttggcctgaacattgcaagaattact 278 Query: 63 tgtcaaggatactaactcttggcccaag 90 ||||||||||| || |||||| ||||| Sbjct: 279 tgtcaaggatatcaagtcttggtccaag 306 Score = 65.9 bits (33), Expect = 7e-09 Identities = 39/41 (95%) Strand = Plus / Plus Query: 440 tcacatattgagtatcgttggggaggagaaggcctaaggaa 480 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 653 tcacatattgagtatcgttggggaggagaaggtttaaggaa 693 Score = 48.1 bits (24), Expect = 0.002 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aggcatgcttcccactgattttgatgctttcatctgcaatagtgggag 360 ||||||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 526 aggcatgctcccgactgactttgatgcctttatatgcaatagtgggag 573 Score = 40.1 bits (20), Expect = 0.39 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ctgtagactctgttaacaaggaag 188 |||||||||||||||| ||||||| Sbjct: 378 ctgtagactctgttaaaaaggaag 401 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 239 atgtcgggttcaactggttttgtgctgtcaacttc 273 ||||| ||||| || |||||||||||||| ||||| Sbjct: 452 atgtcaggttctacaggttttgtgctgtctacttc 486 >gi|71441092|gb|DR822142.1|DR822142 ZM_BFb0062D23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 704 Score = 56.0 bits (28), Expect = 7e-06 Identities = 109/136 (80%) Strand = Plus / Minus Query: 602 aatcatcttcctcctttaaaggagttgaggaagttgatgagaatccaatctctccgttgc 661 |||||| | |||||||| |||||| || ||||||||||||||||| || || ||||| Sbjct: 703 aatcatttgcctcctttgaaggagctgcaaaagttgatgagaatccagtcactgcgttgt 644 Query: 662 aatgcattatataaccacagcgctaccagattatctgtagtccctatccacgcatcacgc 721 |||| | |||||||| |||| ||||| |||||||| | || || || ||||| || Sbjct: 643 catgctctgtataaccatggcgccaccaggctatctgtaattccaatgcatgcatcgcga 584 Query: 722 tctcaggctctaaggt 737 |||||||||||||||| Sbjct: 583 tctcaggctctaaggt 568 >gi|58029442|gb|CX724869.1|CX724869 EST5009 Zea mays embryo sac cDNA library Zea mays cDNA clone ES10245 5' similar to sucrose-phosphate synthase 1, mRNA sequence Length = 684 Score = 46.1 bits (23), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| |||||||| Sbjct: 350 attgaatatcgctggggaggagaaggtctaaggaa 384 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 143 aggaagaatatcattgttatttctgtagactctgt 177 |||||| | |||||||| ||| ||||||||||||| Sbjct: 44 aggaagcacatcattgtaattgctgtagactctgt 78 >gi|6626371|gb|AW257903.1|AW257903 687063G10.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 556 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 485 attgaatatcgctggggaggagaaggtttaaggaa 519 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 143 aggaagaatatcattgttatttctgtagactctgt 177 |||||| | |||||||| ||| ||||||||||||| Sbjct: 179 aggaagcacatcattgtaattgctgtagactctgt 213 >gi|32857860|gb|CD997541.1|CD997541 QBD8e11.xg QBD Zea mays cDNA clone QBD8e11, mRNA sequence Length = 616 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 136 attgaatatcgctggggaggagaaggtttaaggaa 170 >gi|40333903|gb|CK367973.1|CK367973 zmrws055_0A10-002-f01.s0 zmrws055 Zea mays cDNA 5', mRNA sequence Length = 658 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 77 attgaatatcgctggggaggagaaggtttaaggaa 111 >gi|60347549|gb|DN214522.1|DN214522 MEST860_B01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 748 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 143 aggaagaatatcattgttatttctgtagactctgt 177 |||||| | |||||||| ||| ||||||||||||| Sbjct: 518 aggaagcacatcattgtaattgctgtagactctgt 552 >gi|67012760|gb|CO441509.1|CO441509 MZCCL10032F04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 839 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 165 attgaatatcgctggggaggagaaggtttaaggaa 199 >gi|21213156|gb|AY109435.1| Zea mays CL790_1 mRNA sequence Length = 3577 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 2708 attgaatatcgctggggaggagaaggtttaaggaa 2742 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 143 aggaagaatatcattgttatttctgtagactctgt 177 |||||| | |||||||| ||| ||||||||||||| Sbjct: 2402 aggaagcacatcattgtaattgctgtagactctgt 2436 >gi|21213156|gb|AY109435.1| Zea mays CL790_1 mRNA sequence Length = 3577 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 446 attgagtatcgttggggaggagaaggcctaaggaa 480 ||||| ||||| |||||||||||||| ||||||| Sbjct: 2708 attgaatatcgctggggaggagaaggtttaaggaa 2742 Score = 38.2 bits (19), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 143 aggaagaatatcattgttatttctgtagactctgt 177 |||||| | |||||||| ||| ||||||||||||| Sbjct: 2402 aggaagcacatcattgtaattgctgtagactctgt 2436 >gi|48717678|gb|AC146976.5| Zea mays clone ZMMBBb0356L13, *** SEQUENCING IN PROGRESS *** Length = 149227 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 511 agaaagaaagggaagaaca 529 ||||||||||||||||||| Sbjct: 128086 agaaagaaagggaagaaca 128104 >gi|60341430|gb|DN208403.1|DN208403 MEST869_H01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 695 tctgtagtccctatccac 712 |||||||||||||||||| Sbjct: 193 tctgtagtccctatccac 176 >gi|67029135|gb|CO457884.1|CO457884 MZCCL20015F11.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 940 Score = 36.2 bits (18), Expect = 6.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 152 atcattgttatttctgtagactctgt 177 |||||||| ||| ||||||||||||| Sbjct: 667 atcattgtaattgctgtagactctgt 692 >gi|86471133|gb|DY237503.1|DY237503 ZM_BFb0254K18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 417 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 285 cagaaatacattcactgc 302 |||||||||||||||||| Sbjct: 239 cagaaatacattcactgc 222 >gi|91630496|gb|AC185109.1| Zea mays chromosome UNK clone ZMMBBb-585B15; ZMMBBb0585B15, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 118555 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 149 aatatcattgttatttct 166 |||||||||||||||||| Sbjct: 1186 aatatcattgttatttct 1203 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 245,392 Number of Sequences: 836351 Number of extensions: 245392 Number of successful extensions: 18821 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 18706 Number of HSP's gapped (non-prelim): 102 length of query: 737 length of database: 669,372,029 effective HSP length: 19 effective length of query: 718 effective length of database: 653,481,360 effective search space: 469199616480 effective search space used: 469199616480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)