BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 11001390.3.1 (1251 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|19822541|gb|BQ048565.1|BQ048565 952022C04.x4 952 - BMS tissue... 1128 0.0 gi|71436082|gb|DR817132.1|DR817132 ZM_BFb0050F09.r ZM_BFb Zea ma... 926 0.0 gi|18659153|gb|BM500182.1|BM500182 PAC000000000286 Pioneer AF-1 ... 892 0.0 gi|74237602|gb|DT645516.1|DT645516 ZM_BFb0105J04.r ZM_BFb Zea ma... 842 0.0 gi|71761331|gb|DR959268.1|DR959268 ZM_BFb0071A19.f ZM_BFb Zea ma... 823 0.0 gi|18450436|gb|BM428714.1|BM428714 952022C04.x3 952 - BMS tissue... 817 0.0 gi|67029136|gb|CO457885.1|CO457885 MZCCL20015F12.g Maize Endospe... 799 0.0 gi|71446638|gb|DR827688.1|DR827688 ZM_BFb0071A19.r ZM_BFb Zea ma... 783 0.0 gi|74237601|gb|DT645515.1|DT645515 ZM_BFb0105J04.f ZM_BFb Zea ma... 763 0.0 gi|50327221|gb|CO522347.1|CO522347 3530_1_147_1_E02.y_1 3530 - F... 733 0.0 gi|18649514|gb|BM498333.1|BM498333 952022C04.x1 952 - BMS tissue... 515 e-144 gi|88747295|gb|DY531436.1|DY531436 ZM_BFb0250D22.r ZM_BFb Zea ma... 448 e-124 gi|89001189|gb|AC183372.1| Zea mays chromosome UNK clone ZMMBBb-... 400 e-109 gi|91051203|gb|EB161621.1|EB161621 ZM_BFb0300P21.r ZM_BFb Zea ma... 242 9e-62 gi|18660363|gb|BM500823.1|BM500823 PAC000000000223 Pioneer AF-1 ... 82 2e-13 gi|32910516|gb|CF015328.1|CF015328 QBL3h09.xg QBL Zea mays cDNA ... 82 2e-13 gi|91055086|gb|EB165504.1|EB165504 ZM_BFb0341G06.f ZM_BFb Zea ma... 70 7e-10 gi|32794008|gb|CD946244.1|CD946244 REK_79 GeneTag1 Zea mays cDNA... 60 7e-07 gi|32794112|gb|CD946348.1|CD946348 REM_50 GeneTag1 Zea mays cDNA... 60 7e-07 gi|32823708|gb|CD963430.1|CD963430 SDU_189 GeneTag2 Zea mays cDN... 60 7e-07 gi|32823975|gb|CD963697.1|CD963697 SDW_39 GeneTag2 Zea mays cDNA... 60 7e-07 gi|57790132|gb|AC149811.2| Zea mays clone ZMMBBb0098N23, *** SEQ... 58 3e-06 gi|22543058|gb|BU093496.1|BU093496 1091045F02.y1 1091 - Immature... 54 4e-05 gi|26457118|gb|CA828701.1|CA828701 1114032C09.y2 1114 - Unigene ... 54 4e-05 gi|30031992|gb|CB833843.1|CB833843 3529_1_84_1_D12.y_1 3529 - 2 ... 54 4e-05 gi|31354653|gb|CD439010.1|CD439010 EL01N0519H07.b Endosperm_5 Ze... 54 4e-05 gi|60358809|gb|DN225782.1|DN225782 MEST1179_D07.T7-1 UGA-ZmSAM-X... 54 4e-05 gi|67031808|gb|CO460557.1|CO460557 MZCCL15027E04.g Maize Endospe... 54 4e-05 gi|67034898|gb|CO463431.1|CO463431 MZCCL15034C03.g Maize Endospe... 54 4e-05 gi|67040055|gb|CO466310.1|CO466310 MZCCL20036H07.g Maize Endospe... 54 4e-05 gi|21206719|gb|AY103641.1| Zea mays PCO072771 mRNA sequence 54 4e-05 gi|21206719|gb|AY103641.1| Zea mays PCO072771 mRNA sequence 54 4e-05 gi|90992696|gb|AC184699.1| Zea mays chromosome UNK clone ZMMBBb-... 52 2e-04 gi|71423969|gb|DR806195.1|DR806195 ZM_BFb0032A07.r ZM_BFb Zea ma... 46 0.011 gi|78124426|gb|DV542810.1|DV542810 ZM_BFb0238D04.r ZM_BFb Zea ma... 46 0.011 gi|89762658|gb|DY690153.1|DY690153 ZM_BFb0287G11.r ZM_BFb Zea ma... 46 0.011 gi|91055087|gb|EB165505.1|EB165505 ZM_BFb0341G06.r ZM_BFb Zea ma... 46 0.011 gi|93015042|gb|EB640562.1|EB640562 ZM_BFb0329I18.r ZM_BFb Zea ma... 46 0.011 gi|71322235|gb|DR797807.1|DR797807 ZM_BFb0020B08.r ZM_BFb Zea ma... 38 2.6 gi|71770252|gb|DR968189.1|DR968189 ZM_BFb0089G06.r ZM_BFb Zea ma... 38 2.6 gi|74245211|gb|DT653125.1|DT653125 ZM_BFb0119O05.r ZM_BFb Zea ma... 38 2.6 gi|76286153|gb|DV025721.1|DV025721 ZM_BFb0146H02.r ZM_BFb Zea ma... 38 2.6 gi|76290641|gb|DV030209.1|DV030209 ZM_BFb0152P05.r ZM_BFb Zea ma... 38 2.6 gi|76293491|gb|DV033059.1|DV033059 ZM_BFb0157B17.r ZM_BFb Zea ma... 38 2.6 gi|78081922|gb|DV510334.1|DV510334 ZM_BFb0189O12.r ZM_BFb Zea ma... 38 2.6 gi|78085389|gb|DV513782.1|DV513782 ZM_BFb0195D06.r ZM_BFb Zea ma... 38 2.6 gi|85861455|gb|AC177945.1| Zea mays chromosome UNK clone CH201-1... 38 2.6 >gi|19822541|gb|BQ048565.1|BQ048565 952022C04.x4 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 586 Score = 1128 bits (569), Expect = 0.0 Identities = 586/588 (99%), Gaps = 2/588 (0%) Strand = Plus / Plus Query: 664 ggggcgaatcattgccacataggcctgctcaagacagtgcttttgctgttgctcgttttt 723 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1 ggggcgaatcattgccacataggcctgctcaagacag-gcttt-gctgttgctcgttttt 58 Query: 724 atcaacgtggggaagcttacaaaattattacatgtattttggtggaaccaattttgagcg 783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 atcaacgtggggaagcttacaaaattattacatgtattttggtggaaccaattttgagcg 118 Query: 784 gacagctggtggtccacttcagataactagctatgattatgatgcaccaattgacgaata 843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gacagctggtggtccacttcagataactagctatgattatgatgcaccaattgacgaata 178 Query: 844 tggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaact 903 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 tggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaact 238 Query: 904 ttgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccat 963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ttgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccat 298 Query: 964 gcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaa 1023 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaa 358 Query: 1024 ttcacagttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctg 1083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ttcacagttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctg 418 Query: 1084 gatttttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtga 1143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gatttttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtga 478 Query: 1144 aactgtggcttttaatacagccagggttggtacacaaacatcgnttttcaatgtcgaatc 1203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 aactgtggcttttaatacagccagggttggtacacaaacatcgnttttcaatgtcgaatc 538 Query: 1204 tgggtcccccagctattcaagtaggcataaacctagaattctatccct 1251 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tgggtcccccagctattcaagtaggcataaacctagaattctatccct 586 >gi|71436082|gb|DR817132.1|DR817132 ZM_BFb0050F09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 728 Score = 926 bits (467), Expect = 0.0 Identities = 478/482 (99%) Strand = Plus / Plus Query: 8 gctcgtcgntgcggggctccactacccgcgtgccacgcccgagatgtggccgagtttgat 67 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gctcgtctctgcggggctccactacccgcgtgccacgcccgagatgtggccgagtttgat 306 Query: 68 tgcaaagtgcaaggagggcggcgtggatgtaattgagacatatgtgttttggaatgggca 127 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 307 tgcaaagtgcaaggagggcggcgtggatgcaattgagacatatgtgttttggaatgggca 366 Query: 128 tgagccggccaaaggccagtattacttcgaaggaagatttgatattgtcaggtttgctaa 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 tgagccggccaaaggccagtattacttcgaaggaagatttgatattgtcaggtttgctaa 426 Query: 188 gctggttgcagctgaaggtctatttctttttctgcgaatcggcccatatgcttgtgctga 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gctggttgcagctgaaggtctatttctttttctgcgaatcggcccatatgcttgtgctga 486 Query: 248 atggaatttcggtggtttcccagtttggttgcgcgatgtccctgggatagaattccgcac 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 atggaatttcggtggtttcccagtttggttgcgcgatgtccctgggatagaattccgcac 546 Query: 308 tgacaatgaaccctacaaggctgaaatgcagatttttgtgacaaaaattgtagatatcat 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 tgacaatgaaccctacaaggctgaaatgcagatttttgtgacaaaaattgtagatatcat 606 Query: 368 gaaagaggagaagctttattcttggcaaggtggtcccattatactgcagcagattgaaaa 427 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 607 gaaagaggagaagctttattcttggcaaggtggtctcattatactgcagcagattgaaaa 666 Query: 428 tgaatacggtaacattcaaggccattatggtcaagcagggaagagatacatgctatgggc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 tgaatacggtaacattcaaggccattatggtcaagcagggaagagatacatgctatgggc 726 Query: 488 ag 489 || Sbjct: 727 ag 728 >gi|18659153|gb|BM500182.1|BM500182 PAC000000000286 Pioneer AF-1 array Zea mays cDNA, mRNA sequence Length = 453 Score = 892 bits (450), Expect = 0.0 Identities = 453/453 (100%) Strand = Plus / Plus Query: 1 ggcacgagctcgtcgntgcggggctccactacccgcgtgccacgcccgagatgtggccga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcacgagctcgtcgntgcggggctccactacccgcgtgccacgcccgagatgtggccga 60 Query: 61 gtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacatatgtgttttgga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacatatgtgttttgga 120 Query: 121 atgggcatgagccggccaaaggccagtattacttcgaaggaagatttgatattgtcaggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atgggcatgagccggccaaaggccagtattacttcgaaggaagatttgatattgtcaggt 180 Query: 181 ttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcggcccatatgctt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcggcccatatgctt 240 Query: 241 gtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccctgggatagaat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccctgggatagaat 300 Query: 301 tccgcactgacaatgaaccctacaaggctgaaatgcagatttttgtgacaaaaattgtag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tccgcactgacaatgaaccctacaaggctgaaatgcagatttttgtgacaaaaattgtag 360 Query: 361 atatcatgaaagaggagaagctttattcttggcaaggtggtcccattatactgcagcaga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atatcatgaaagaggagaagctttattcttggcaaggtggtcccattatactgcagcaga 420 Query: 421 ttgaaaatgaatacggtaacattcaaggccatt 453 ||||||||||||||||||||||||||||||||| Sbjct: 421 ttgaaaatgaatacggtaacattcaaggccatt 453 >gi|74237602|gb|DT645516.1|DT645516 ZM_BFb0105J04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 705 Score = 842 bits (425), Expect = 0.0 Identities = 434/437 (99%) Strand = Plus / Plus Query: 50 gatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacata 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacata 328 Query: 110 tgtgttttggaatgggcatgagccggccaaaggccagtattacttcgaaggaagatttga 169 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 329 tgtgttttggaatgggcatgagccggccaaaggacagtattacttcgaaggaagatttga 388 Query: 170 tattgtcaggtttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcgg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 tattgtcaggtttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcgg 448 Query: 230 cccatatgcttgtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cccatatgcttgtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccc 508 Query: 290 tgggatagaattccgcactgacaatgaaccctacaaggctgaaatgcagatttttgtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tgggatagaattccgcaccgacaatgaaccctacaaggctgaaatgcagatttttgtgac 568 Query: 350 aaaaattgtagatatcatgaaagaggagaagctttattcttggcaaggtggtcccattat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 aaaaattgtagatatcatgaaagaggagaagctttattcttggcaaggtggtcccattat 628 Query: 410 actgcagcagattgaaaatgaatacggtaacattcaaggccattatggtcaagcagggaa 469 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 629 actgcagcagattgaaaatgaatacggtaacattccaggccattatggtcaagcagggaa 688 Query: 470 gagatacatgctatggg 486 ||||||||||||||||| Sbjct: 689 gagatacatgctatggg 705 >gi|71761331|gb|DR959268.1|DR959268 ZM_BFb0071A19.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 688 Score = 823 bits (415), Expect = 0.0 Identities = 441/450 (98%) Strand = Plus / Minus Query: 802 tcagataactagctatgattatgatgcaccaattgacgaatatggtatcttaagacaacc 861 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 688 tcagataactagttatgattatgatgccccaattgacgaatacggtatcttaagacaacc 629 Query: 862 taagtgggggcatttgaaagacctacatgcagctattaaactttgtgaatcagctcttac 921 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 taagtgggggcatttgaaagacctacatgcagctattaaactttgtgaatcagctcttac 569 Query: 922 tgcagtagatggttcacctcattatgtaaaattagggcccatgcaggaggcacatgtgta 981 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tgcagtagatggttcacctcattatgtaaaattagggcccatgcaggaggcacatgtgta 509 Query: 982 ttccagtgaaaatgtccacacaaatggaagcatttcaggaaattcacagttttgctcagc 1041 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 508 ttccagtgaaaatgtccacccaaatggaagcatttcaggaaattcacagttttgttcagc 449 Query: 1042 ttttcttgccaacattgatgaacataaatatgcttcagtctggatttttggaaaatctta 1101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ttttcttgccaacattgatgaacataaatatgcttcagtctggatttttggaaaatctta 389 Query: 1102 tagtctaccaccatggtctgtgagcatactaccagactgtgaaactgtggcttttaatac 1161 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tagtctacccccatggtctgtgagcatactaccagactgtgaaactgtggcttttaatac 329 Query: 1162 agccagggttggtacacaaacatcgnttttcaatgtcgaatctgggtcccccagctattc 1221 |||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 328 agccagggtttgtacacaaacatcgtttttcaatgtcgaatttgggtcccccagctattc 269 Query: 1222 aagtaggcataaacctagaattctatccct 1251 |||||||||||||||||||||||||||||| Sbjct: 268 aagtaggcataaacctagaattctatccct 239 >gi|18450436|gb|BM428714.1|BM428714 952022C04.x3 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 428 Score = 817 bits (412), Expect = 0.0 Identities = 422/424 (99%), Gaps = 1/424 (0%) Strand = Plus / Plus Query: 681 cataggcctgctcaagacagtgcttttgctgttgctcgtttttatcaacgtggggaagct 740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cataggcctgctcaagacagtgcttttgctgttgctcgtttttatcaacgtggggaagct 64 Query: 741 tacaaaattattacatgtattttggtggaaccaattttgagcggacagctggtggtccac 800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tacaaaattattacatgtattttggtggaaccaattttgagcggacagctggtggtccac 124 Query: 801 ttcagataactagctatgattatgatgcacc-aattgacgaatatggtatcttaagacaa 859 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 125 ttcagataactagctatgattatgaagcacccaattgacgaatatggtatcttaagacaa 184 Query: 860 cctaagtgggggcatttgaaagacctacatgcagctattaaactttgtgaatcagctctt 919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cctaagtgggggcatttgaaagacctacatgcagctattaaactttgtgaatcagctctt 244 Query: 920 actgcagtagatggttcacctcattatgtaaaattagggcccatgcaggaggcacatgtg 979 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 actgcagtagatggttcacctcattatgtaaaattagggcccatgcaggaggcacatgtg 304 Query: 980 tattccagtgaaaatgtccacacaaatggaagcatttcaggaaattcacagttttgctca 1039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 tattccagtgaaaatgtccacacaaatggaagcatttcaggaaattcacagttttgctca 364 Query: 1040 gcttttcttgccaacattgatgaacataaatatgcttcagtctggatttttggaaaatct 1099 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 gcttttcttgccaacattgatgaacataaatatgcttcagtctggatttttggaaaatct 424 Query: 1100 tata 1103 |||| Sbjct: 425 tata 428 >gi|67029136|gb|CO457885.1|CO457885 MZCCL20015F12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 938 Score = 799 bits (403), Expect = 0.0 Identities = 405/406 (99%) Strand = Plus / Plus Query: 846 gtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaacttt 905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaacttt 127 Query: 906 gtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccatgc 965 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccatgc 187 Query: 966 aggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaatt 1025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 aggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaatt 247 Query: 1026 cacagttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctgga 1085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cacagttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctgga 307 Query: 1086 tttttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtgaaa 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 tttttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtgaaa 367 Query: 1146 ctgtggcttttaatacagccagggttggtacacaaacatcgnttttcaatgtcgaatctg 1205 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 368 ctgtggcttttaatacagccagggttggtacacaaacatcgtttttcaatgtcgaatctg 427 Query: 1206 ggtcccccagctattcaagtaggcataaacctagaattctatccct 1251 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ggtcccccagctattcaagtaggcataaacctagaattctatccct 473 >gi|71446638|gb|DR827688.1|DR827688 ZM_BFb0071A19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 675 Score = 783 bits (395), Expect = 0.0 Identities = 404/407 (99%) Strand = Plus / Plus Query: 50 gatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacata 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacata 328 Query: 110 tgtgttttggaatgggcatgagccggccaaaggccagtattacttcgaaggaagatttga 169 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 329 tgtgttttggaatgggcatgagccggccaaaggacagtattacttcgaaggaagatttga 388 Query: 170 tattgtcaggtttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcgg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 tattgtcaggtttgctaagctggttgcagctgaaggtctatttctttttctgcgaatcgg 448 Query: 230 cccatatgcttgtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cccatatgcttgtgctgaatggaatttcggtggtttcccagtttggttgcgcgatgtccc 508 Query: 290 tgggatagaattccgcactgacaatgaaccctacaaggctgaaatgcagatttttgtgac 349 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tgggatagaattccgcaccgacaatgaaccctacaaggctgaaatgcagatttttgtgac 568 Query: 350 aaaaattgtagatatcatgaaagaggagaagctttattcttggcaaggtggtcccattat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 aaaaattgtagatatcatgaaagaggagaagctttattcttggcaaggtggtcccattat 628 Query: 410 actgcagcagattgaaaatgaatacggtaacattcaaggccattatg 456 |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 629 actgcagcagattggaaatgaatacggtaacattcaaggccattatg 675 >gi|74237601|gb|DT645515.1|DT645515 ZM_BFb0105J04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 650 Score = 763 bits (385), Expect = 0.0 Identities = 405/412 (98%) Strand = Plus / Minus Query: 840 aatatggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctatta 899 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 aatacggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctatta 591 Query: 900 aactttgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggc 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 aactttgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggc 531 Query: 960 ccatgcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcag 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 ccatgcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcag 471 Query: 1020 gaaattcacagttttgctcagcttttcttgccaacattgatgaacataaatatgcttcag 1079 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gaaattcacagttttgttcagcttttcttgccaacattgatgaacataaatatgcttcag 411 Query: 1080 tctggatttttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagact 1139 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 410 tctggatttttggaaaatcttatagtctacccccatggtctgtgagcatactaccagact 351 Query: 1140 gtgaaactgtggcttttaatacagccagggttggtacacaaacatcgnttttcaatgtcg 1199 |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 350 gtgaaactgtggcttttaatacagccagggtttgtacccaaacatcgtttttcaatgtcg 291 Query: 1200 aatctgggtcccccagctattcaagtaggcataaacctagaattctatccct 1251 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 aatttgggtcccccagctattcaagtaggcataaacctagaattctatccct 239 >gi|50327221|gb|CO522347.1|CO522347 3530_1_147_1_E02.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 806 Score = 733 bits (370), Expect = 0.0 Identities = 375/377 (99%) Strand = Plus / Plus Query: 875 ttgaaagacctacatgcagctattaaactttgtgaatcagctcttactgcagtagatggt 934 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgaaagacctacatgcagctattaaactttgtgaatcagctcttactgcagtagatggt 60 Query: 935 tcacctcattatgtaaaattagggcccatgcaggaggcacatgtgtattccagtgaaaat 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcacctcattatgtaaaattagggcccatgcaggaggcacatgtgtattccagtgaaaat 120 Query: 995 gtccacacaaatggaagcatttcaggaaattcacagttttgctcagcttttcttgccaac 1054 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtccacacaaatggaagcatttcaggaaattcacagttttgctcagcttttcttgccaac 180 Query: 1055 attgatgaacataaatatgcttcagtctggatttttggaaaatcttatagtctaccacca 1114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 attgatgaacataaatatgcttcagtctggatttttggaaaatcttatagtctaccacca 240 Query: 1115 tggtctgtgagcatactaccagactgtgaaactgtggcttttaatacagccagggttggt 1174 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 241 tggtctgtgagcatactaccagactgtgaaactgtggcttttaatacagccagggtttgt 300 Query: 1175 acacaaacatcgnttttcaatgtcgaatctgggtcccccagctattcaagtaggcataaa 1234 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acacaaacatcgtttttcaatgtcgaatctgggtcccccagctattcaagtaggcataaa 360 Query: 1235 cctagaattctatccct 1251 ||||||||||||||||| Sbjct: 361 cctagaattctatccct 377 >gi|18649514|gb|BM498333.1|BM498333 952022C04.x1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 267 Score = 515 bits (260), Expect = e-144 Identities = 264/266 (99%) Strand = Plus / Plus Query: 836 gacgaatatggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagct 895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 gacgaatatggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagct 61 Query: 896 attaaactttgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaatta 955 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 62 attaaactttgtgaatcagctcttactgcagtagatggntcacctcattatgtaaaatta 121 Query: 956 gggcccatgcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatt 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gggcccatgcaggaggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatt 181 Query: 1016 tcaggaaattcacagttttgctcagcttttcttgccaacattgatgaacataaatatgct 1075 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tcaggaaattcacagntttgctcagcttttcttgccaacattgatgaacataaatatgct 241 Query: 1076 tcagtctggatttttggaaaatctta 1101 |||||||||||||||||||||||||| Sbjct: 242 tcagtctggatttttggaaaatctta 267 >gi|88747295|gb|DY531436.1|DY531436 ZM_BFb0250D22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 491 Score = 448 bits (226), Expect = e-124 Identities = 264/277 (95%) Strand = Plus / Plus Query: 8 gctcgtcgntgcggggctccactacccgcgtgccacgcccgagatgtggccgagtttgat 67 ||||||| ||||||||||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 215 gctcgtctctgcggggctccactacccgcgtgccacgcccgatatgtggcagattttgat 274 Query: 68 tgcaaagtgcaaggagggcggcgtggatgtaattgagacatatgtgttttggaatgggca 127 ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 275 tgcaaagtgcagggagggcggcgtggatgcatttgagacatatgtgttttggaatgggca 334 Query: 128 tgagccggccaaaggccagtattacttcgaaggaagatttgatattgtcaggtttgctaa 187 ||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 335 tgacccggccaaaggccagtattacttcaaaggaagatttgatattgtcgggtttgctaa 394 Query: 188 gctggttgcagctgaaggtctatttctttttctgcgaatcggcccatatgcttgtgctga 247 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gctggttgcagctgagggtctatttctttttctgcgaatcggcccatatgcttgtgctga 454 Query: 248 atggaatttcggtggtttcccagtttggttgcgcgat 284 |||||||||||||||||||||||||||||||||||| Sbjct: 455 gtggaatttcggtggtttcccagtttggttgcgcgat 491 >gi|89001189|gb|AC183372.1| Zea mays chromosome UNK clone ZMMBBb-572B3; ZMMBBb0572B03, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 129532 Score = 400 bits (202), Expect = e-109 Identities = 202/202 (100%) Strand = Plus / Minus Query: 969 aggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaattcac 1028 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67658 aggcacatgtgtattccagtgaaaatgtccacacaaatggaagcatttcaggaaattcac 67599 Query: 1029 agttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctggattt 1088 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67598 agttttgctcagcttttcttgccaacattgatgaacataaatatgcttcagtctggattt 67539 Query: 1089 ttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtgaaactg 1148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67538 ttggaaaatcttatagtctaccaccatggtctgtgagcatactaccagactgtgaaactg 67479 Query: 1149 tggcttttaatacagccagggt 1170 |||||||||||||||||||||| Sbjct: 67478 tggcttttaatacagccagggt 67457 Score = 291 bits (147), Expect = 1e-76 Identities = 147/147 (100%) Strand = Plus / Minus Query: 417 cagattgaaaatgaatacggtaacattcaaggccattatggtcaagcagggaagagatac 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48198 cagattgaaaatgaatacggtaacattcaaggccattatggtcaagcagggaagagatac 48139 Query: 477 atgctatgggcagctcagatggcacttgcacttgatactggtgttccttgggtaatgtgt 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48138 atgctatgggcagctcagatggcacttgcacttgatactggtgttccttgggtaatgtgt 48079 Query: 537 aggcaaacagatgctccagaacaaatt 563 ||||||||||||||||||||||||||| Sbjct: 48078 aggcaaacagatgctccagaacaaatt 48052 Score = 252 bits (127), Expect = 9e-65 Identities = 127/127 (100%) Strand = Plus / Plus Query: 845 ggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaactt 904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31751 ggtatcttaagacaacctaagtgggggcatttgaaagacctacatgcagctattaaactt 31810 Query: 905 tgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccatg 964 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31811 tgtgaatcagctcttactgcagtagatggttcacctcattatgtaaaattagggcccatg 31870 Query: 965 caggagg 971 ||||||| Sbjct: 31871 caggagg 31877 Score = 232 bits (117), Expect = 9e-59 Identities = 117/117 (100%) Strand = Plus / Minus Query: 143 ccagtattacttcgaaggaagatttgatattgtcaggtttgctaagctggttgcagctga 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25234 ccagtattacttcgaaggaagatttgatattgtcaggtttgctaagctggttgcagctga 25175 Query: 203 aggtctatttctttttctgcgaatcggcccatatgcttgtgctgaatggaatttcgg 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25174 aggtctatttctttttctgcgaatcggcccatatgcttgtgctgaatggaatttcgg 25118 Score = 196 bits (99), Expect = 5e-48 Identities = 106/107 (99%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 652 ggtatgccgactggggcgaatcattgccacataggcctgctcaagacagtgcttttgctg 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39736 ggtatgccgactggggcgaatcattgccacataggcctgctcaagacagtgcttttgctg 39677 Query: 712 ttgctcgtttttatcaacgtgg-ggaagcttacaaaattattacatg 757 |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 39676 ttgctcgtttttatcaacgtggtggaagcttacaaaattattacatg 39630 Score = 188 bits (95), Expect = 1e-45 Identities = 95/95 (100%) Strand = Plus / Minus Query: 325 aggctgaaatgcagatttttgtgacaaaaattgtagatatcatgaaagaggagaagcttt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49754 aggctgaaatgcagatttttgtgacaaaaattgtagatatcatgaaagaggagaagcttt 49695 Query: 385 attcttggcaaggtggtcccattatactgcagcag 419 ||||||||||||||||||||||||||||||||||| Sbjct: 49694 attcttggcaaggtggtcccattatactgcagcag 49660 Score = 186 bits (94), Expect = 5e-45 Identities = 94/94 (100%) Strand = Plus / Minus Query: 564 ctcaatacttgcaatgccttttactgtgatgggttcaaaccaaattcctacaacaagcca 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47946 ctcaatacttgcaatgccttttactgtgatgggttcaaaccaaattcctacaacaagcca 47887 Query: 624 acaatatggactgaggattgggatggatggtatg 657 |||||||||||||||||||||||||||||||||| Sbjct: 47886 acaatatggactgaggattgggatggatggtatg 47853 Score = 186 bits (94), Expect = 5e-45 Identities = 97/98 (98%) Strand = Plus / Minus Query: 49 agatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgtaattgagacat 108 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 25420 agatgtggccgagtttgattgcaaagtgcaaggagggcggcgtggatgcaattgagacat 25361 Query: 109 atgtgttttggaatgggcatgagccggccaaaggccag 146 |||||||||||||||||||||||||||||||||||||| Sbjct: 25360 atgtgttttggaatgggcatgagccggccaaaggccag 25323 Score = 176 bits (89), Expect = 4e-42 Identities = 92/93 (98%) Strand = Plus / Plus Query: 757 gtattttggtggaaccaattttgagcggacagctggtggtccacttcagataactagcta 816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31559 gtattttggtggaaccaattttgagcggacagctggtggtccacttcagataactagcta 31618 Query: 817 tgattatgatgcaccaattgacgaatatggtat 849 ||||||||||||||||||||||||||| ||||| Sbjct: 31619 tgattatgatgcaccaattgacgaatacggtat 31651 Score = 161 bits (81), Expect = 3e-37 Identities = 83/84 (98%) Strand = Plus / Minus Query: 1168 ggttggtacacaaacatcgnttttcaatgtcgaatctgggtcccccagctattcaagtag 1227 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 66548 ggttggtacacaaacatcgtttttcaatgtcgaatctgggtcccccagctattcaagtag 66489 Query: 1228 gcataaacctagaattctatccct 1251 |||||||||||||||||||||||| Sbjct: 66488 gcataaacctagaattctatccct 66465 Score = 137 bits (69), Expect = 4e-30 Identities = 69/69 (100%) Strand = Plus / Minus Query: 259 gtggtttcccagtttggttgcgcgatgtccctgggatagaattccgcactgacaatgaac 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49910 gtggtttcccagtttggttgcgcgatgtccctgggatagaattccgcactgacaatgaac 49851 Query: 319 cctacaagg 327 ||||||||| Sbjct: 49850 cctacaagg 49842 Score = 71.9 bits (36), Expect = 2e-10 Identities = 41/43 (95%) Strand = Plus / Minus Query: 8 gctcgtcgntgcggggctccactacccgcgtgccacgcccgag 50 ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 25829 gctcgtctctgcggggctccactacccgcgtgccacgcccgag 25787 >gi|91051203|gb|EB161621.1|EB161621 ZM_BFb0300P21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 454 Score = 242 bits (122), Expect = 9e-62 Identities = 140/145 (96%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 8 gctcgtcgntgcggggctccactacccgcgtgccacgcccgagatgtggccgagtttgat 67 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gctcgtctctgcggggctccactacccgcgtgccacgcccgagatgtggccgagtttgat 369 Query: 68 tgcaaagtgcaaggagggcggcgtggatgtaattgagacatatgtgttttggaatgggca 127 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 370 tgcaaagtgcaaggagggcggcgtggatgcaattgagacatatgtgttttggaatgggca 429 Query: 128 tgag-ccggccaaaggccagtatta 151 |||| |||||| ||||||||||||| Sbjct: 430 tgagcccggcccaaggccagtatta 454 >gi|18660363|gb|BM500823.1|BM500823 PAC000000000223 Pioneer AF-1 array Zea mays cDNA, mRNA sequence Length = 449 Score = 81.8 bits (41), Expect = 2e-13 Identities = 54/57 (94%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 184 ctaagctggttgcagctgaaggtctattt-ctttttctgcgaatcggcccatatgct 239 ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 135 ctaagctggttgctgctgaaggtctattttctttttctgcgtatcggcccatatgct 79 >gi|32910516|gb|CF015328.1|CF015328 QBL3h09.xg QBL Zea mays cDNA clone QBL3h09, mRNA sequence Length = 558 Score = 81.8 bits (41), Expect = 2e-13 Identities = 54/57 (94%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 184 ctaagctggttgcagctgaaggtctattt-ctttttctgcgaatcggcccatatgct 239 ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 390 ctaagctggttgctgctgaaggtctattttctttttctgcgtatcggcccatatgct 446 >gi|91055086|gb|EB165504.1|EB165504 ZM_BFb0341G06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 703 Score = 69.9 bits (35), Expect = 7e-10 Identities = 88/103 (85%), Gaps = 2/103 (1%) Strand = Plus / Minus Query: 746 aattattacatgtattttggtggaaccaattttgagcggacagctggtggtccacttca- 804 ||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 269 aattattacatgtatcatggtggaacaaattttgggcgcacagctggtggtcca-ttcat 211 Query: 805 gataactagctatgattatgatgcaccaattgacgaatatggt 847 ||||||||| || |||||||| || ||||| ||||||||| Sbjct: 210 tgcaactagctacgactatgatgctcctattgatgaatatggt 168 >gi|32794008|gb|CD946244.1|CD946244 REK_79 GeneTag1 Zea mays cDNA, mRNA sequence Length = 184 Score = 60.0 bits (30), Expect = 7e-07 Identities = 86/102 (84%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 746 aattattacatgtattttggtggaaccaattttgagcggacagctggtggtccacttcag 805 ||||| ||||||||| ||| ||||| ||||||| ||| || ||||| ||||| ||||| Sbjct: 52 aattactacatgtatcatggaggaacaaattttgggcgcaccgctgggggtcc-cttcat 110 Query: 806 -ataactagctatgattatgatgcaccaattgacgaatatgg 846 | ||| ||||||||||||||||| |||||||| |||||||| Sbjct: 111 cacaacaagctatgattatgatgctccaattgatgaatatgg 152 >gi|32794112|gb|CD946348.1|CD946348 REM_50 GeneTag1 Zea mays cDNA, mRNA sequence Length = 184 Score = 60.0 bits (30), Expect = 7e-07 Identities = 86/102 (84%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 746 aattattacatgtattttggtggaaccaattttgagcggacagctggtggtccacttcag 805 ||||| ||||||||| ||| ||||| ||||||| ||| || ||||| ||||| ||||| Sbjct: 52 aattactacatgtatcatggaggaacaaattttgggcgcactgctgggggtcc-cttcat 110 Query: 806 -ataactagctatgattatgatgcaccaattgacgaatatgg 846 | ||| ||||||||||||||||| |||||||| |||||||| Sbjct: 111 cacaacaagctatgattatgatgctccaattgatgaatatgg 152 >gi|32823708|gb|CD963430.1|CD963430 SDU_189 GeneTag2 Zea mays cDNA, mRNA sequence Length = 184 Score = 60.0 bits (30), Expect = 7e-07 Identities = 86/102 (84%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 746 aattattacatgtattttggtggaaccaattttgagcggacagctggtggtccacttcag 805 ||||| ||||||||| ||| ||||| ||||||| ||| || ||||| ||||| ||||| Sbjct: 133 aattactacatgtatcatggaggaacaaattttgggcgcactgctgggggtcc-cttcat 75 Query: 806 -ataactagctatgattatgatgcaccaattgacgaatatgg 846 | ||| ||||||||||||||||| |||||||| |||||||| Sbjct: 74 cacaacaagctatgattatgatgctccaattgatgaatatgg 33 >gi|32823975|gb|CD963697.1|CD963697 SDW_39 GeneTag2 Zea mays cDNA, mRNA sequence Length = 184 Score = 60.0 bits (30), Expect = 7e-07 Identities = 86/102 (84%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 746 aattattacatgtattttggtggaaccaattttgagcggacagctggtggtccacttcag 805 ||||| ||||||||| ||| ||||| ||||||| ||| || ||||| ||||| ||||| Sbjct: 52 aattactacatgtatcatggaggaacaaattttgggcgcactgctgggggtcc-cttcat 110 Query: 806 -ataactagctatgattatgatgcaccaattgacgaatatgg 846 | ||| ||||||||||||||||| |||||||| |||||||| Sbjct: 111 cacaacaagctatgattatgatgccccaattgatgaatatgg 152 >gi|57790132|gb|AC149811.2| Zea mays clone ZMMBBb0098N23, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces Length = 111702 Score = 58.0 bits (29), Expect = 3e-06 Identities = 35/37 (94%) Strand = Plus / Minus Query: 812 agctatgattatgatgcaccaattgacgaatatggta 848 ||||||||||||||||| |||||||| |||||||||| Sbjct: 2488 agctatgattatgatgctccaattgatgaatatggta 2452 >gi|22543058|gb|BU093496.1|BU093496 1091045F02.y1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 197 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 96 agctatgattatgatgctccaattgatgaatatgg 130 >gi|26457118|gb|CA828701.1|CA828701 1114032C09.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 521 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 160 agctatgattatgatgctccaattgatgaatatgg 194 >gi|30031992|gb|CB833843.1|CB833843 3529_1_84_1_D12.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 556 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 480 agctatgattatgatgctccaattgatgaatatgg 514 >gi|31354653|gb|CD439010.1|CD439010 EL01N0519H07.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 774 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 463 agctatgattatgatgctccaattgatgaatatgg 497 >gi|60358809|gb|DN225782.1|DN225782 MEST1179_D07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 725 Score = 54.0 bits (27), Expect = 4e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 808 aactagctatgattatgatgcaccaattgacgaatatgg 846 ||||||||| || ||||||||||||||||| |||||||| Sbjct: 537 aactagctacgactatgatgcaccaattgatgaatatgg 575 >gi|67031808|gb|CO460557.1|CO460557 MZCCL15027E04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 856 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 88 agctatgattatgatgctccaattgatgaatatgg 122 >gi|67034898|gb|CO463431.1|CO463431 MZCCL15034C03.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 771 Score = 54.0 bits (27), Expect = 4e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 808 aactagctatgattatgatgcaccaattgacgaatatgg 846 ||||||||| || ||||||||||||||||| |||||||| Sbjct: 241 aactagctacgactatgatgcaccaattgatgaatatgg 279 >gi|67040055|gb|CO466310.1|CO466310 MZCCL20036H07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 843 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 532 agctatgattatgatgctccaattgatgaatatgg 566 >gi|21206719|gb|AY103641.1| Zea mays PCO072771 mRNA sequence Length = 1125 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 617 agctatgattatgatgctccaattgatgaatatgg 651 Score = 44.1 bits (22), Expect = 0.042 Identities = 28/30 (93%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttggttg 278 ||||| |||||||| ||||||||||||||| Sbjct: 51 tggaacttcggtggcttcccagtttggttg 80 >gi|21206719|gb|AY103641.1| Zea mays PCO072771 mRNA sequence Length = 1125 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| |||||||| |||||||| Sbjct: 617 agctatgattatgatgctccaattgatgaatatgg 651 Score = 44.1 bits (22), Expect = 0.042 Identities = 28/30 (93%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttggttg 278 ||||| |||||||| ||||||||||||||| Sbjct: 51 tggaacttcggtggcttcccagtttggttg 80 >gi|90992696|gb|AC184699.1| Zea mays chromosome UNK clone ZMMBBb-277A13; ZMMBBb0277A13, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces Length = 145953 Score = 52.0 bits (26), Expect = 2e-04 Identities = 73/86 (84%), Gaps = 2/86 (2%) Strand = Plus / Minus Query: 763 tggtggaaccaattttgagcggacagctggtggtccacttca-gataactagctatgatt 821 ||||||||| ||||||| ||| ||||||||||||||| |||| ||||||||| || | Sbjct: 81031 tggtggaacaaattttgggcgcacagctggtggtcca-ttcattgcaactagctacgact 80973 Query: 822 atgatgcaccaattgacgaatatggt 847 ||||||| || ||||| ||||||||| Sbjct: 80972 atgatgctcctattgatgaatatggt 80947 >gi|71423969|gb|DR806195.1|DR806195 ZM_BFb0032A07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 801 Score = 46.1 bits (23), Expect = 0.011 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttgg 275 |||||||||||||||||||| |||||| Sbjct: 394 tggaatttcggtggtttccctgtttgg 420 >gi|78124426|gb|DV542810.1|DV542810 ZM_BFb0238D04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 787 Score = 46.1 bits (23), Expect = 0.011 Identities = 32/35 (91%) Strand = Plus / Plus Query: 812 agctatgattatgatgcaccaattgacgaatatgg 846 ||||||||||||||||| ||| |||| |||||||| Sbjct: 88 agctatgattatgatgctccatttgatgaatatgg 122 >gi|89762658|gb|DY690153.1|DY690153 ZM_BFb0287G11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 801 Score = 46.1 bits (23), Expect = 0.011 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttgg 275 |||||||||||||||||||| |||||| Sbjct: 485 tggaatttcggtggtttccctgtttgg 511 >gi|91055087|gb|EB165505.1|EB165505 ZM_BFb0341G06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 786 Score = 46.1 bits (23), Expect = 0.011 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttgg 275 |||||||||||||||||||| |||||| Sbjct: 516 tggaatttcggtggtttccctgtttgg 542 >gi|93015042|gb|EB640562.1|EB640562 ZM_BFb0329I18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 725 Score = 46.1 bits (23), Expect = 0.011 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 tggaatttcggtggtttcccagtttgg 275 |||||||||||||||||||| |||||| Sbjct: 441 tggaatttcggtggtttccctgtttgg 467 >gi|71322235|gb|DR797807.1|DR797807 ZM_BFb0020B08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 722 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 222 tccactacccgcgcagcacgccggagatgtggccg 256 >gi|71770252|gb|DR968189.1|DR968189 ZM_BFb0089G06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 846 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 231 tccactacccgcgcagcacgccggagatgtggccg 265 >gi|74245211|gb|DT653125.1|DT653125 ZM_BFb0119O05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 402 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 248 tccactacccgcgcagcacgccggagatgtggccg 282 >gi|76286153|gb|DV025721.1|DV025721 ZM_BFb0146H02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 862 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 242 tccactacccgcgcagcacgccggagatgtggccg 276 >gi|76290641|gb|DV030209.1|DV030209 ZM_BFb0152P05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 793 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 248 tccactacccgcgcagcacgccggagatgtggccg 282 >gi|76293491|gb|DV033059.1|DV033059 ZM_BFb0157B17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 794 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 220 tccactacccgcgcagcacgccggagatgtggccg 254 >gi|78081922|gb|DV510334.1|DV510334 ZM_BFb0189O12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 638 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 225 tccactacccgcgcagcacgccggagatgtggccg 259 >gi|78085389|gb|DV513782.1|DV513782 ZM_BFb0195D06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 555 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 25 tccactacccgcgtgccacgcccgagatgtggccg 59 ||||||||||||| |||||| |||||||||||| Sbjct: 238 tccactacccgcgcagcacgccggagatgtggccg 272 >gi|85861455|gb|AC177945.1| Zea mays chromosome UNK clone CH201-104G21; ZMMBBc0104G21, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces Length = 179924 Score = 38.2 bits (19), Expect = 2.6 Identities = 37/43 (86%) Strand = Plus / Plus Query: 91 tggatgtaattgagacatatgtgttttggaatgggcatgagcc 133 ||||||| ||| |||| || || ||||||||||| |||||||| Sbjct: 171047 tggatgtcattcagacctaagtcttttggaatggacatgagcc 171089 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 390,775 Number of Sequences: 836351 Number of extensions: 390775 Number of successful extensions: 27974 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27867 Number of HSP's gapped (non-prelim): 101 length of query: 1251 length of database: 669,372,029 effective HSP length: 20 effective length of query: 1231 effective length of database: 652,645,009 effective search space: 803406006079 effective search space used: 803406006079 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)