BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.063O07F020916.3.1
(657 letters)
Database: swall
1,381,838 sequences; 439,479,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9FNN2|Q9FNN2 WD-repeat protein-like. 116 3e-25
sptr|Q8H925|Q8H925 Putative WD domain containing protein. 51 1e-05
sptr|Q93ZU7|Q93ZU7 Putative WD-repeat protein. 50 3e-05
sptr|Q9FND4|Q9FND4 WD-repeat protein-like. 50 3e-05
sptr|Q9FM63|Q9FM63 Genomic DNA, chromosome 5, P1 clone:MDF20. 41 0.016
sptr|Q8I3S4|Q8I3S4 Hypothetical protein, conserved. 38 0.13
sptr|Q7S7H8|Q7S7H8 Hypothetical protein. 36 0.39
sptr|Q871I3|Q871I3 Hypothetical protein B16M17.040. 36 0.39
sptr|Q90YJ0|Q90YJ0 Procollagen type I alpha 2 chain. 36 0.51
sptr|Q9VGD9|Q9VGD9 CG17424 protein (GH04404p). 35 0.67
sptr|Q9VP21|Q9VP21 CG7611 protein (LP01609p). 35 0.87
sptr|Q8KTV5|Q8KTV5 Hypothetical protein. 35 0.87
sptr|Q853J1|Q853J1 Gp89. 35 0.87
sptr|Q801M5|Q801M5 Hypothetical protein. 35 1.1
sptr|O86782|O86782 SC6G4.19c protein. 35 1.1
sptr|Q94IZ0|Q94IZ0 OSJNBa0025P13.4 protein. 34 1.9
sptr|Q8UUJ3|Q8UUJ3 Type I collagen alpha 2 chain (Fragment). 34 1.9
sw|Q60673|PTPN_MOUSE Protein-tyrosine phosphatase-like N precurs... 34 1.9
sptr|Q9FMH0|Q9FMH0 Gb|AAF24960.1. 34 1.9
sptr|O36027|O36027 Wiskott-aldrich syndrome protein homolog 1. 34 1.9
sptr|Q7M849|Q7M849 Putative periplasmic protein. 33 2.5
sptr|Q9VUD1|Q9VUD1 CG7345 protein. 33 2.5
sptr|Q891B8|Q891B8 Glycerol kinase (EC 2.7.1.30). 33 3.3
sptr|Q7ULG7|Q7ULG7 Probable mu-protocadherin-putative cell-sufac... 33 3.3
sptrnew|BAC83420|BAC83420 Hypothetical protein P0483E06.126. 33 3.3
sptr|Q7YYP5|Q7YYP5 Hydroxyproline-rich glycoprotein dz-hrgp, pro... 33 3.3
sptr|Q8VYN9|Q8VYN9 Hypothetical protein. 33 4.3
sw|P13983|EXTN_TOBAC Extensin precursor (Cell wall hydroxyprolin... 33 4.3
sptr|Q9LSR2|Q9LSR2 Genomic DNA, chromosome 5, BAC clone:F24B18. 33 4.3
sptr|Q7Q750|Q7Q750 AgCP5643 (Fragment). 33 4.3
>sptr|Q9FNN2|Q9FNN2 WD-repeat protein-like.
Length = 589
Score = 116 bits (290), Expect = 3e-25
Identities = 65/112 (58%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Frame = +2
Query: 317 MGGSEDDEPPSKRARTSSVESASLPDCFSFSKF-------SNPLGSTMARPLPSQGKEVM 475
MG ED EPP KRA+ + E P+ FS + SN LG MARPLPSQG +
Sbjct: 1 MGVVEDTEPPLKRAKRLADE----PNGFSANSSVRGSSVNSNSLGDLMARPLPSQGDDET 56
Query: 476 VGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQV 631
+GSKGVI+K EFVRIIT+ LYSLGY+K+GA+LEEESGI LHN +KLF +QV
Sbjct: 57 IGSKGVIRKSEFVRIITRALYSLGYDKTGAMLEEESGISLHNSTIKLFLQQV 108
>sptr|Q8H925|Q8H925 Putative WD domain containing protein.
Length = 521
Score = 51.2 bits (121), Expect = 1e-05
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 440 ARPLPSQGKEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILH 598
A + S G+ + G +G++ +EE VR+I ++LYSLGY ++ A LE ESG+ L+
Sbjct: 5 ASSVSSHGEARLGGERGLVDREELVRVIAQSLYSLGYRRAAAALEAESGMPLY 57
>sptr|Q93ZU7|Q93ZU7 Putative WD-repeat protein.
Length = 308
Score = 50.1 bits (118), Expect = 3e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +2
Query: 473 MVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
++GSKG++KK EF+RI+ + LYSLG++ S + LE ES I+ + +QV+
Sbjct: 8 VLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVL 61
>sptr|Q9FND4|Q9FND4 WD-repeat protein-like.
Length = 523
Score = 50.1 bits (118), Expect = 3e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +2
Query: 473 MVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
++GSKG++KK EF+RI+ + LYSLG++ S + LE ES I+ + +QV+
Sbjct: 8 VLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVL 61
>sptr|Q9FM63|Q9FM63 Genomic DNA, chromosome 5, P1 clone:MDF20.
Length = 175
Score = 40.8 bits (94), Expect = 0.016
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 4 LSRFYSVGSPLPQAKHHHPSLPPYASSPPRALSPPNPTAG 123
L R+ G+P P + + P PP SSPPR+ PP PT G
Sbjct: 56 LQRYSPYGNPPPPSPQYSPPPPPSQSSPPRSRCPPVPTTG 95
>sptr|Q8I3S4|Q8I3S4 Hypothetical protein, conserved.
Length = 1276
Score = 37.7 bits (86), Expect = 0.13
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 485 KGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI--GWK 643
+G++KK+ + +I + + ++GY+KS LE ESGI L P++K + ++ WK
Sbjct: 278 EGLLKKDVLLLLI-QAIKNMGYKKSAKYLELESGIELEQPLIKKMHKNILLGKWK 331
>sptr|Q7S7H8|Q7S7H8 Hypothetical protein.
Length = 696
Score = 36.2 bits (82), Expect = 0.39
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 500 KEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
+E+F R++ + + +GY + L ++SG L NP V FR V+
Sbjct: 268 REQFTRLLIQAMTEMGYNDAADKLSQDSGYRLENPTVAAFRAAVL 312
>sptr|Q871I3|Q871I3 Hypothetical protein B16M17.040.
Length = 838
Score = 36.2 bits (82), Expect = 0.39
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 500 KEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
+E+F R++ + + +GY + L ++SG L NP V FR V+
Sbjct: 294 REQFTRLLIQAMTEMGYNDAADKLSQDSGYRLENPTVAAFRAAVL 338
>sptr|Q90YJ0|Q90YJ0 Procollagen type I alpha 2 chain.
Length = 1352
Score = 35.8 bits (81), Expect = 0.51
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 168 ERSPESAPNLQGIARPGGRIGWGKRPRGRGCVGREGRMVVFGL-GERG 28
E+ P AP QG+ P G +G +P RG G +G G+ GERG
Sbjct: 535 EQGPSGAPGFQGLPGPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERG 582
>sptr|Q9VGD9|Q9VGD9 CG17424 protein (GH04404p).
Length = 474
Score = 35.4 bits (80), Expect = 0.67
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 8 PVSIQSVPLSPKPNTTILPSLPTHPLPLGRFPHPIRPP 121
P S+P+ P+P+ LP +P HP PHP PP
Sbjct: 406 PTKPSSIPIPPRPDHPSLPPVPPHPTLPPIPPHPTLPP 443
>sptr|Q9VP21|Q9VP21 CG7611 protein (LP01609p).
Length = 630
Score = 35.0 bits (79), Expect = 0.87
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 503 EEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
+E +R+I + L+ +G +KS L ESG L +P FRE V+
Sbjct: 98 QEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVL 141
>sptr|Q8KTV5|Q8KTV5 Hypothetical protein.
Length = 318
Score = 35.0 bits (79), Expect = 0.87
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Frame = -1
Query: 396 QSGKLADSTEDVLARFEG---GSSSSEPPMKCQDQPIYFSLQGR*WYAISTQTVANSYRN 226
Q G L D LA G G S+ P C D ++ + Y QTV SY+N
Sbjct: 173 QFGALVDKFRADLADMAGQCVGGSAGGVPWICGDTTYFWKQKNESTY----QTVYGSYKN 228
Query: 225 R*RILQPGVPIPAD--SPRNPERSPESAPNLQGIARPGGR 112
+ P VP D P PE P++ GI G +
Sbjct: 229 KTEKNMPFVPFMTDENGVNVPTNKPEEDPDIPGIGYYGSK 268
>sptr|Q853J1|Q853J1 Gp89.
Length = 874
Score = 35.0 bits (79), Expect = 0.87
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -1
Query: 213 LQPGVPIPADSPRNPERSPESAPNLQGIARPGGRIGWGKRPRGRGCVGRE 64
L PGVP P + PRN +R ES N PGG + R R R G+E
Sbjct: 722 LPPGVPEPTEVPRNRQRPAESDDN-----HPGGNLKPASRNRKRTRKGQE 766
>sptr|Q801M5|Q801M5 Hypothetical protein.
Length = 1346
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 168 ERSPESAPNLQGIARPGGRIGWGKRPRGRGCVGREGRMVVFGL-GERGT 25
E+ P AP QG+ PGG G +P RG G G G GERGT
Sbjct: 528 EQGPAGAPGFQGLPGPGGAAGELGKPGERGAPGDFGPAGPAGTRGERGT 576
>sptr|O86782|O86782 SC6G4.19c protein.
Length = 190
Score = 34.7 bits (78), Expect = 1.1
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 31 PLPQAKHHHPSLPPYASSPPRALSPP---NPTAGAGDSLEIRRGFGAPL 168
P P HPS PP +SSP + SPP P G G GF PL
Sbjct: 15 PSPPPPSPHPSSPPSSSSPSSSPSPPVPAPPVPGLGSLPRAEFGFPGPL 63
>sptr|Q94IZ0|Q94IZ0 OSJNBa0025P13.4 protein.
Length = 420
Score = 33.9 bits (76), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 46 KHHHPSLPPYASSPPRALSPPNPTAGA 126
+HHH LPP + PP A PP+P A
Sbjct: 392 RHHHQLLPPPHTDPPPAAFPPDPATAA 418
>sptr|Q8UUJ3|Q8UUJ3 Type I collagen alpha 2 chain (Fragment).
Length = 1346
Score = 33.9 bits (76), Expect = 1.9
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -1
Query: 204 GVPIPADSPRNP----ERSPESAPNLQGIARPGGRIGWGKRPRGRGCVGREGRMVVFGL- 40
G P PA N E+ P AP QG+ P G G +P +G G +G G+
Sbjct: 513 GAPGPAGVVGNAGEKGEQGPSGAPGFQGLPGPAGPAGEAGKPGNQGMHGDQGLPGPAGVK 572
Query: 39 GERG 28
GERG
Sbjct: 573 GERG 576
>sw|Q60673|PTPN_MOUSE Protein-tyrosine phosphatase-like N precursor
(R-PTP-N) (PTP IA-2).
Length = 979
Score = 33.9 bits (76), Expect = 1.9
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 13/77 (16%)
Frame = -1
Query: 282 QGR*WYAISTQTVANSYRNR*RILQPGVPIPADS----PRNPERSPE---------SAPN 142
QG W+ TQ V + R L+P P P D PR P + E S+P
Sbjct: 96 QGLSWHDDLTQHVISQEMERIPRLRPPEPHPRDRSGLVPRKPGPAGELLTQGNPTGSSPA 155
Query: 141 LQGIARPGGRIGWGKRP 91
QG RP G WG P
Sbjct: 156 AQGFPRPAGGRSWGGSP 172
>sptr|Q9FMH0|Q9FMH0 Gb|AAF24960.1.
Length = 689
Score = 33.9 bits (76), Expect = 1.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 306 LGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFP 419
LG S V +T HPQ+ +HP + +Y T F +FP
Sbjct: 182 LGSSVPVQGLTKHPQHQMQHPPSSFPMYTTSGSFHSFP 219
>sptr|O36027|O36027 Wiskott-aldrich syndrome protein homolog 1.
Length = 574
Score = 33.9 bits (76), Expect = 1.9
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 VGSPLPQAKHHHPSLPPYASSPPRALSPPNPTAGAGDSLEIRRGFG-APLGVSRRISGDR 198
+ PLP P LPP A +PP A +P P A E+ + G A L S R SG
Sbjct: 455 IAPPLPAGMPAAPPLPPAAPAPPPAPAPA-PAAPVASIAELPQQDGRANLMASIRASGGM 513
Query: 199 DSRLKNPLSVSVTVCNS 249
D +S S +V ++
Sbjct: 514 DLLKSRKVSASPSVAST 530
>sptr|Q7M849|Q7M849 Putative periplasmic protein.
Length = 366
Score = 33.5 bits (75), Expect = 2.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 GLSRFYSVGSPLPQAKHHHPSLPPYASSPPRALSPPNPTA 120
G + F + +P P+ K HP PP ++PP+A P+P A
Sbjct: 38 GYALFNAFSAPAPKEKLEHPKFPP--ATPPKAQISPSPLA 75
>sptr|Q9VUD1|Q9VUD1 CG7345 protein.
Length = 388
Score = 33.5 bits (75), Expect = 2.5
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +1
Query: 22 VGSPLPQAKHHHPSLPPYASSPPRALSPPNPTAGAGDSLEIRRGFGAPLGVS 177
+G LP H HP PY S P P+ A +L + GFG+PL +S
Sbjct: 249 LGQSLPHL-HGHPHQSPYQSHPHHPHPHPHHVQLAAATLSAKYGFGSPLELS 299
>sptr|Q891B8|Q891B8 Glycerol kinase (EC 2.7.1.30).
Length = 493
Score = 33.1 bits (74), Expect = 3.3
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 458 QGKEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHN 601
+ K V++G KKE F+R + ++L Y+ A +EE+SGI+L N
Sbjct: 357 EAKGVVIGLTRGSKKEHFIRAVIESLAYQSYDVLKA-MEEDSGIVLKN 403
>sptr|Q7ULG7|Q7ULG7 Probable mu-protocadherin-putative cell-suface
protein.
Length = 641
Score = 33.1 bits (74), Expect = 3.3
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -1
Query: 210 QPGVPIPADSPRNPERSPESAPNLQGIARPGGRI-----GWGKRPRGRGCVGREGRMV 52
+PG P + N +R S PNL G RPGG +GK P GR G G +
Sbjct: 197 RPGSDRPGSNRPNIDRPNTSRPNLPGGDRPGGSTRPGMPDFGKLPGGRPSAGDVGNFL 254
>sptrnew|BAC83420|BAC83420 Hypothetical protein P0483E06.126.
Length = 182
Score = 33.1 bits (74), Expect = 3.3
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = +1
Query: 58 PSLPPYASSPPRALSPPNPTAGAGDSLEIRRGFGAPLGVSRRISGDRDSR 207
P PP A+SPP A SPP G + G P G R DRD R
Sbjct: 121 PLAPPPAASPP-AASPPAGLGGGEGAAAAAASVGPPPGHRRACERDRDER 169
>sptr|Q7YYP5|Q7YYP5 Hydroxyproline-rich glycoprotein dz-hrgp,
probable.
Length = 203
Score = 33.1 bits (74), Expect = 3.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 8 PVSIQSVPLSPKPNTTILPSLPTHPLPLGRFPHPIRPPGRAIP 136
P+ PL PKPN T P P PLG+ P P + G P
Sbjct: 39 PLKSTKPPLPPKPNLTYGPQ----PFPLGQVPGPYQSGGSTFP 77
>sptr|Q8VYN9|Q8VYN9 Hypothetical protein.
Length = 242
Score = 32.7 bits (73), Expect = 4.3
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 34 LPQAKHHHPSLPPYA-----SSPPRALSPPNPTAGAGDSLEIRRGFGAPLGVSRRIS 189
LP K HHP P ++ SS P + + P PTAGA RR G + +S S
Sbjct: 11 LPNIKIHHPPSPRHSHHHHSSSTPSSAATPTPTAGA------RRKIGVAVDLSEESS 61
>sw|P13983|EXTN_TOBAC Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein).
Length = 620
Score = 32.7 bits (73), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 31 PLPQAKHHHPSLPPYASSPPRALSPPNP 114
P P ++H HP P YA PP + P+P
Sbjct: 169 PSPPSRHGHPPPPTYAQPPPTPIYSPSP 196
Score = 31.6 bits (70), Expect = 9.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 31 PLPQAKHHHPSLPPYASSPPRALSPPNPT 117
PLP + + P P Y+ PP + SPP PT
Sbjct: 339 PLPSSPIYSPPPPVYSPPPPPSYSPPPPT 367
>sptr|Q9LSR2|Q9LSR2 Genomic DNA, chromosome 5, BAC clone:F24B18.
Length = 250
Score = 32.7 bits (73), Expect = 4.3
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 34 LPQAKHHHPSLPPYA-----SSPPRALSPPNPTAGAGDSLEIRRGFGAPLGVSRRIS 189
LP K HHP P ++ SS P + + P PTAGA RR G + +S S
Sbjct: 11 LPNIKIHHPPSPRHSHHHHSSSTPSSAATPTPTAGA------RRKIGVAVDLSEESS 61
>sptr|Q7Q750|Q7Q750 AgCP5643 (Fragment).
Length = 239
Score = 32.7 bits (73), Expect = 4.3
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Frame = +1
Query: 13 FYSVGSPLPQAKHHHPSLPPYASS--------PPRALSPPNPTA 120
F VGSP HHHP LPP AS PP + P P A
Sbjct: 16 FLVVGSPNGIHHHHHPLLPPRASGFFSVQGKIPPGLTTDPYPAA 59
Database: swall
Posted date: Feb 26, 2004 3:00 PM
Number of letters in database: 439,479,560
Number of sequences in database: 1,381,838
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 609,529,204
Number of Sequences: 1381838
Number of extensions: 15200534
Number of successful extensions: 74704
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73155
length of database: 439,479,560
effective HSP length: 118
effective length of database: 276,422,676
effective search space used: 27642267600
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)