BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ2b01.yg.2.1
(600 letters)
Database: /db/trembl-ebi/tmp/swall
1,302,759 sequences; 415,658,970 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9FRY7|Q9FRY7 Histidine kinase 1. 275 4e-73
sptr|Q852H8|Q852H8 Putative histidine kinase. 181 8e-45
sptr|Q9SIT0|Q9SIT0 Putative histidine kinase (Putative histidine... 163 1e-39
sptr|Q9C5U0|Q9C5U0 Histidine kinase. 163 1e-39
sptr|Q9C5T9|Q9C5T9 Cytokinin receptor CRE1a. 162 2e-39
sptr|Q9C5T8|Q9C5T8 Cytokinin receptor CRE1b. 162 2e-39
sptr|Q8S6P5|Q8S6P5 Putative histidine kinase. 142 3e-33
sptr|Q8L8I6|Q8L8I6 Cytokinin receptor. 140 1e-32
sptr|Q9C5U1|Q9C5U1 Histidine kinase. 140 1e-32
sptr|Q9FZK3|Q9FZK3 F17L21.11. 140 1e-32
sptr|Q8RYG4|Q8RYG4 Putative histidine kinase. 136 2e-31
sptr|Q8GUG0|Q8GUG0 Histidine kinase-like protein (At5g35750). 127 1e-28
sptr|Q9C5U2|Q9C5U2 Histidine kinase. 127 1e-28
sptr|Q9FKH3|Q9FKH3 Histidine kinase-like protein. 122 2e-27
sw|P59342|BARA_SHIFL Sensor protein barA (EC 2.7.3.-). 101 6e-21
sw|P26607|BARA_ECOLI Sensor protein barA (EC 2.7.3.-). 101 6e-21
sptr|Q8RMF4|Q8RMF4 GacS-like sensor kinase protein. 101 6e-21
sptr|Q8Z445|Q8Z445 Sensor protein. 100 1e-20
sptr|O32556|O32556 Sensory kinase. 100 1e-20
sptr|Q9L9E4|Q9L9E4 BarA sensor kinase (Sensory histidine kinase)... 100 2e-20
sptr|O08235|O08235 Sensor/regulator protein RPFA. 100 2e-20
sptrnew|BAC95587|BAC95587 Signal transduction histidine kinase. 99 3e-20
sptr|Q8DC68|Q8DC68 Signal transduction histidine kinase. 99 3e-20
sptr|Q8UCZ6|Q8UCZ6 Two component sensor kinase/response regulato... 99 4e-20
sptr|Q8KQV0|Q8KQV0 Putative histidine kinase. 99 5e-20
sptr|Q8GMB7|Q8GMB7 Putative global response regulation sensor ki... 98 7e-20
sptr|Q8EII0|Q8EII0 Sensory box histidine kinase/response regulator. 98 7e-20
sptr|Q87LP4|Q87LP4 Sensor histidine kinase/response regulator. 97 1e-19
sptr|O31138|O31138 TWO component sensor (Sensor/response regulat... 96 2e-19
sptr|Q9KPC0|Q9KPC0 Sensor histidine kinase/response regulator. 96 2e-19
>sptr|Q9FRY7|Q9FRY7 Histidine kinase 1.
Length = 974
Score = 275 bits (702), Expect = 4e-73
Identities = 140/177 (79%), Positives = 147/177 (83%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L NDVLDRAKIEAGKLELEAVPFDLRSLMDDV+SLFSSKSREKCIELAVFVCDNVPK V+
Sbjct: 411 LINDVLDRAKIEAGKLELEAVPFDLRSLMDDVVSLFSSKSREKCIELAVFVCDNVPKVVI 470
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLA+NSNMEA QVL+GAMNGK GRV+ST N
Sbjct: 471 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAENSNMEANQVLHGAMNGKGGRVESTAN 530
Query: 372 GAFNTLSGFEAAXXRNSWQYFXMXXXXXXXXXXXXXXXXSDQXDSXXVTLXISIXXT 542
GAFNTLSGFEAA RNSWQYF + S+Q DS VTL ISI T
Sbjct: 531 GAFNTLSGFEAADRRNSWQYFKLLLSDKESLLDDLESENSNQSDSDRVTLAISIEDT 587
>sptr|Q852H8|Q852H8 Putative histidine kinase.
Length = 1013
Score = 181 bits (458), Expect = 8e-45
Identities = 100/189 (52%), Positives = 128/189 (67%), Gaps = 12/189 (6%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IELAV+V + VP+ +L
Sbjct: 434 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIELAVYVSERVPEILL 493
Query: 192 GDPWRFRQILTNLVGNAVK--------FTERGHVFVRVCLADNSNMEAGQVLNGAMNGKD 347
GDP RFRQI+TNLVGN++K FTERGH+FV+V LAD+SN+ + +NG +
Sbjct: 494 GDPGRFRQIITNLVGNSIKITIFTLSQFTERGHIFVQVHLADHSNLATEAKIEPVVNGMN 553
Query: 348 GRVDST----TNGAFNTLSGFEAAXXRNSWQYFXMXXXXXXXXXXXXXXXXSDQXDSXXV 515
G D T+G+ NTLSGFEAA RN+W+ F + + DS V
Sbjct: 554 GHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKLLLSYEKNEMPY-------ESDSDKV 606
Query: 516 TLXISIXXT 542
TL +S+ T
Sbjct: 607 TLVVSVEDT 615
>sptr|Q9SIT0|Q9SIT0 Putative histidine kinase (Putative histidine
kinase receptor).
Length = 1057
Score = 163 bits (413), Expect = 1e-39
Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 501 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 560
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNS--NMEAGQVLNGAMNGKDGRVDST 365
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E LNG ++ + + +
Sbjct: 561 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVS--EEMIVVS 618
Query: 366 TNGAFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 619 KQSSYNTLSGYEAADGRNSWDSF 641
>sptr|Q9C5U0|Q9C5U0 Histidine kinase.
Length = 1080
Score = 163 bits (413), Expect = 1e-39
Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 524 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 583
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNS--NMEAGQVLNGAMNGKDGRVDST 365
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E LNG ++ + + +
Sbjct: 584 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVS--EEMIVVS 641
Query: 366 TNGAFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 642 KQSSYNTLSGYEAADGRNSWDSF 664
>sptr|Q9C5T9|Q9C5T9 Cytokinin receptor CRE1a.
Length = 1057
Score = 162 bits (411), Expect = 2e-39
Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 501 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 560
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNS--NMEAGQVLNGAMNGKDGRVDST 365
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E LNG ++ + + +
Sbjct: 561 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVS--EEMIVVS 618
Query: 366 TNGAFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 619 KQSSYNTLSGYEAADGRNSWDSF 641
>sptr|Q9C5T8|Q9C5T8 Cytokinin receptor CRE1b.
Length = 1080
Score = 162 bits (411), Expect = 2e-39
Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 524 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 583
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNS--NMEAGQVLNGAMNGKDGRVDST 365
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E LNG ++ + + +
Sbjct: 584 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVS--EEMIVVS 641
Query: 366 TNGAFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 642 KQSSYNTLSGYEAADGRNSWDSF 664
>sptr|Q8S6P5|Q8S6P5 Putative histidine kinase.
Length = 925
Score = 142 bits (358), Expect = 3e-33
Identities = 73/143 (51%), Positives = 99/143 (69%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IELAV V D VP ++
Sbjct: 387 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIELAVLVSDQVPDVLI 446
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDPWRFRQI+TNLVGN++KFTE+GH+F+RV L + + + + + + +S
Sbjct: 447 GDPWRFRQIITNLVGNSMKFTEQGHIFIRVHLIEEVKRKMEALDDTSPENIEVTANSKNT 506
Query: 372 GAFNTLSGFEAAXXRNSWQYFXM 440
+NTLSG E A R + + F M
Sbjct: 507 MPYNTLSGLEVANNRKTLESFRM 529
>sptr|Q8L8I6|Q8L8I6 Cytokinin receptor.
Length = 1041
Score = 140 bits (353), Expect = 1e-32
Identities = 75/142 (52%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELEAVPFDLR+ +D V+SL S KS EK IELAV+V D VP+ V+
Sbjct: 491 LINEVLDQAKIESGRLELEAVPFDLRADLDKVVSLLSGKSHEKDIELAVYVSDQVPEVVI 550
Query: 192 GDPWRFRQILTNLVGNAVKFT-ERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTT 368
GDP RFRQI+TNLVGN++KFT ++GH+FV V LAD + + + + +
Sbjct: 551 GDPGRFRQIITNLVGNSIKFTKDKGHIFVSVHLADEVKSPL-DIKDEVLKQSLTLIQDRS 609
Query: 369 NGAFNTLSGFEAAXXRNSWQYF 434
+FNTLSGF SW+ F
Sbjct: 610 TASFNTLSGFPVVDRWRSWEKF 631
>sptr|Q9C5U1|Q9C5U1 Histidine kinase.
Length = 1036
Score = 140 bits (352), Expect = 1e-32
Identities = 74/141 (52%), Positives = 99/141 (70%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 502 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 561
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDP RFRQILTNL+GN++KFTE+GH+FV V L D E + ++G T +
Sbjct: 562 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD----ELFESIDG----------ETAS 607
Query: 372 GAFNTLSGFEAAXXRNSWQYF 434
+TLSG A + SW+ F
Sbjct: 608 SPESTLSGLPVADRQRSWENF 628
>sptr|Q9FZK3|Q9FZK3 F17L21.11.
Length = 1092
Score = 140 bits (352), Expect = 1e-32
Identities = 74/141 (52%), Positives = 99/141 (70%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 534 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 593
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDP RFRQILTNL+GN++KFTE+GH+FV V L D E + ++G T +
Sbjct: 594 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD----ELFESIDG----------ETAS 639
Query: 372 GAFNTLSGFEAAXXRNSWQYF 434
+TLSG A + SW+ F
Sbjct: 640 SPESTLSGLPVADRQRSWENF 660
>sptr|Q8RYG4|Q8RYG4 Putative histidine kinase.
Length = 1023
Score = 136 bits (342), Expect = 2e-31
Identities = 77/177 (43%), Positives = 106/177 (59%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 490 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 549
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDP R RQI+TNLVGN++KFTERGH+++ V + + M +V G N
Sbjct: 550 GDPGRIRQIITNLVGNSIKFTERGHIYLTVHVVEEV-MSCLEVETGIQN----------- 597
Query: 372 GAFNTLSGFEAAXXRNSWQYFXMXXXXXXXXXXXXXXXXSDQXDSXXVTLXISIXXT 542
NTLSG+ A R SW+ + SD ++L IS+ T
Sbjct: 598 --TNTLSGYPVANRRCSWESIRLFNRELHSSEKSFAPIASD-----SISLVISVEDT 647
>sptr|Q8GUG0|Q8GUG0 Histidine kinase-like protein (At5g35750).
Length = 652
Score = 127 bits (319), Expect = 1e-28
Identities = 72/142 (50%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 115 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 174
Query: 192 GDPWRFRQILTNLVGNAVKFT-ERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTT 368
GDP RFRQI+TNLVGN++KFT ERGH+F+ V LAD ++ + A+ + + +
Sbjct: 175 GDPSRFRQIITNLVGNSIKFTQERGHIFISVHLAD--EVKEPLTIEDAVLKQRLALGCSE 232
Query: 369 NGAFNTLSGFEAAXXRNSWQYF 434
+G T+SGF A SW+ F
Sbjct: 233 SG--ETVSGFPAVNAWGSWKNF 252
>sptr|Q9C5U2|Q9C5U2 Histidine kinase.
Length = 1176
Score = 127 bits (319), Expect = 1e-28
Identities = 72/142 (50%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 639 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 698
Query: 192 GDPWRFRQILTNLVGNAVKFT-ERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTT 368
GDP RFRQI+TNLVGN++KFT ERGH+F+ V LAD ++ + A+ + + +
Sbjct: 699 GDPSRFRQIITNLVGNSIKFTQERGHIFISVHLAD--EVKEPLTIEDAVLKQRLALGCSE 756
Query: 369 NGAFNTLSGFEAAXXRNSWQYF 434
+G T+SGF A SW+ F
Sbjct: 757 SG--ETVSGFPAVNAWGSWKNF 776
>sptr|Q9FKH3|Q9FKH3 Histidine kinase-like protein.
Length = 1173
Score = 122 bits (307), Expect = 2e-27
Identities = 70/141 (49%), Positives = 96/141 (68%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 639 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 698
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDP RFRQI+TNLVGN++K ERGH+F+ V LAD ++ + A+ + + + +
Sbjct: 699 GDPSRFRQIITNLVGNSIK--ERGHIFISVHLAD--EVKEPLTIEDAVLKQRLALGCSES 754
Query: 372 GAFNTLSGFEAAXXRNSWQYF 434
G T+SGF A SW+ F
Sbjct: 755 G--ETVSGFPAVNAWGSWKNF 773
>sw|P59342|BARA_SHIFL Sensor protein barA (EC 2.7.3.-).
Length = 918
Score = 101 bits (252), Expect = 6e-21
Identities = 47/90 (52%), Positives = 70/90 (77%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE++PF LRS +D+V++L + S +K +EL + + +VP +V+
Sbjct: 344 IINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVI 403
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +QI+TNLVGNA+KFTE G++ + V
Sbjct: 404 GDPLRLQQIITNLVGNAIKFTENGNIDILV 433
>sw|P26607|BARA_ECOLI Sensor protein barA (EC 2.7.3.-).
Length = 918
Score = 101 bits (252), Expect = 6e-21
Identities = 47/90 (52%), Positives = 70/90 (77%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE++PF LRS +D+V++L + S +K +EL + + +VP +V+
Sbjct: 344 IINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVI 403
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +QI+TNLVGNA+KFTE G++ + V
Sbjct: 404 GDPLRLQQIITNLVGNAIKFTENGNIDILV 433
>sptr|Q8RMF4|Q8RMF4 GacS-like sensor kinase protein.
Length = 935
Score = 101 bits (252), Expect = 6e-21
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 9/115 (7%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L NDVLD +KI+AGKLELE PFDL + DV+ + S + +K I +A + DN+P+ V+
Sbjct: 342 LINDVLDFSKIDAGKLELETAPFDLEEAVFDVMDMLSPLAAQKHIAMAFYYADNIPQQVI 401
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV---------CLADNSNMEAGQVLNG 329
GD RF+QILTNL+ NA+KFT G + VRV CL S ++G L+G
Sbjct: 402 GDALRFKQILTNLISNAIKFTPDGEIIVRVRMEHDDIGQCLLHFSVQDSGIGLSG 456
>sptr|Q8Z445|Q8Z445 Sensor protein.
Length = 918
Score = 100 bits (250), Expect = 1e-20
Identities = 45/90 (50%), Positives = 72/90 (80%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE++PF LR+ +D+V++L + S +K +EL + + ++VP++V+
Sbjct: 344 IINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPENVI 403
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +Q++TNLVGNA+KFTE G++ + V
Sbjct: 404 GDPLRLQQVITNLVGNAIKFTESGNIDILV 433
>sptr|O32556|O32556 Sensory kinase.
Length = 928
Score = 100 bits (249), Expect = 1e-20
Identities = 46/90 (51%), Positives = 69/90 (76%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE +PF L S +DDV+ L + + EK +EL + + ++VP+ +
Sbjct: 341 IINDVLDFSKLEAGKLVLEDIPFSLHSTLDDVVMLLAHTAHEKGLELTLSIQNDVPEQYV 400
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +QI+TNL+GNA+KFTE+G++ +RV
Sbjct: 401 GDPLRIQQIITNLLGNAIKFTEQGNIDIRV 430
>sptr|Q9L9E4|Q9L9E4 BarA sensor kinase (Sensory histidine kinase)
(EC 2.7.3.-).
Length = 918
Score = 100 bits (248), Expect = 2e-20
Identities = 45/90 (50%), Positives = 71/90 (78%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE++PF LR+ +D+V++L + S +K +EL + + ++VP +V+
Sbjct: 344 IINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVI 403
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +Q++TNLVGNA+KFTE G++ + V
Sbjct: 404 GDPLRLQQVITNLVGNAIKFTESGNIDILV 433
>sptr|O08235|O08235 Sensor/regulator protein RPFA.
Length = 929
Score = 100 bits (248), Expect = 2e-20
Identities = 49/104 (47%), Positives = 74/104 (71%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE +PF L + +DDV+ L + + EK +EL + + ++VP+ +
Sbjct: 343 IINDVLDFSKLEAGKLVLEDIPFSLHNTLDDVVMLLAHTAHEKGLELTLSIQNDVPEQFV 402
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVL 323
GDP R +QI+TNL+GNA+KFTE+G++ +RV + E QVL
Sbjct: 403 GDPLRIQQIITNLLGNAIKFTEQGNIDIRV---EKRRQELHQVL 443
>sptrnew|BAC95587|BAC95587 Signal transduction histidine kinase.
Length = 928
Score = 99.4 bits (246), Expect = 3e-20
Identities = 45/90 (50%), Positives = 69/90 (76%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +K+EAGKL LE +PFD R +++VISL ++ + EK +E+ + + +P+ V+
Sbjct: 342 IINDILDFSKLEAGKLALENIPFDFRESLEEVISLQATSAHEKGLEITLKIDPRIPEGVV 401
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +Q+LTNLVGN++KFTERG++ V V
Sbjct: 402 GDPLRIQQVLTNLVGNSIKFTERGNIDVSV 431
>sptr|Q8DC68|Q8DC68 Signal transduction histidine kinase.
Length = 928
Score = 99.4 bits (246), Expect = 3e-20
Identities = 45/90 (50%), Positives = 69/90 (76%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +K+EAGKL LE +PFD R +++VISL ++ + EK +E+ + + +P+ V+
Sbjct: 342 IINDILDFSKLEAGKLALENIPFDFRESLEEVISLQATSAHEKGLEITLKIDPRIPEGVV 401
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +Q+LTNLVGN++KFTERG++ V V
Sbjct: 402 GDPLRIQQVLTNLVGNSIKFTERGNIDVSV 431
>sptr|Q8UCZ6|Q8UCZ6 Two component sensor kinase/response regulator
hybrid.
Length = 1243
Score = 99.0 bits (245), Expect = 4e-20
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +KIEAG+++L +VPFD ++DV+SL SS + EK IEL V + +V V+
Sbjct: 745 IINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIELIVRIDASVSGKVI 804
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GD RFRQI+TN+VGNAVKFTE GHV V +
Sbjct: 805 GDAGRFRQIVTNIVGNAVKFTETGHVLVEL 834
>sptr|Q8KQV0|Q8KQV0 Putative histidine kinase.
Length = 1268
Score = 98.6 bits (244), Expect = 5e-20
Identities = 55/140 (39%), Positives = 86/140 (61%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L ND+LD +KIEAGKLEL+ PF L LM D+ +FSS + +K +E+ V +VP+ +L
Sbjct: 588 LLNDILDFSKIEAGKLELDPHPFSLTDLMQDIGLVFSSSAEQKGLEVLYDVTADVPEHLL 647
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GD +R +Q+L NLVGNA+KFT++G + + + + ++ G++ N + + KD + T
Sbjct: 648 GDSFRIKQVLINLVGNAIKFTDKGEILISI---RSQSLPEGEI-NLSFSIKDTGIGITLE 703
Query: 372 GAFNTLSGFEAAXXRNSWQY 431
SGF+ A S +Y
Sbjct: 704 QQNALFSGFQQADSSISRRY 723
>sptr|Q8GMB7|Q8GMB7 Putative global response regulation sensor
kinase GrrS.
Length = 908
Score = 98.2 bits (243), Expect = 7e-20
Identities = 47/90 (52%), Positives = 68/90 (75%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ NDVLD +K+EAGKL LE +PF LR +D+VI L + + EK +EL + V ++VP+ V+
Sbjct: 343 IINDVLDFSKLEAGKLVLEHIPFSLRETLDEVIVLLAPSAHEKGLELTLDVHNDVPEQVI 402
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GD R +QI+TNL+GNA+KFTE G++ +RV
Sbjct: 403 GDSLRLQQIITNLLGNAIKFTETGNIDIRV 432
>sptr|Q8EII0|Q8EII0 Sensory box histidine kinase/response regulator.
Length = 1765
Score = 98.2 bits (243), Expect = 7e-20
Identities = 46/97 (47%), Positives = 68/97 (70%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +KIEAGKL++E V F L ++++D+ +FS ++ +K IEL V NVP+ +L
Sbjct: 1091 IINDILDFSKIEAGKLDIENVSFQLDTMLEDLSDMFSERAAQKQIELLFAVAPNVPRHLL 1150
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSN 302
GDP R Q+L NL+ NA+KFTERG V + + L + N
Sbjct: 1151 GDPLRLGQVLINLMNNAIKFTERGEVLLSLSLVEQQN 1187
>sptr|Q87LP4|Q87LP4 Sensor histidine kinase/response regulator.
Length = 932
Score = 97.1 bits (240), Expect = 1e-19
Identities = 45/90 (50%), Positives = 68/90 (75%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +K+EAGKL LE +PFD R +++VI+L ++ + EK +E+ + V +P ++
Sbjct: 342 IINDILDFSKLEAGKLALENIPFDFRESLEEVINLQATSAHEKGLEITLKVDPKIPPGLV 401
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +QILTNLVGN++KFTERG++ V V
Sbjct: 402 GDPLRIQQILTNLVGNSIKFTERGNIDVSV 431
>sptr|O31138|O31138 TWO component sensor (Sensor/response regulator
hybrid) (Fragment).
Length = 925
Score = 96.3 bits (238), Expect = 2e-19
Identities = 49/100 (49%), Positives = 68/100 (68%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ N++LD +KIEAGKL LE +PF+LR L+ D +++ + + EK +EL V + P +
Sbjct: 335 IINEILDFSKIEAGKLVLENLPFNLRDLIQDALTMLAPAAHEKQLELVSLVYRDTPIQLQ 394
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GDP R +QILTNLVGNA+KFT+ G V VR L D S+ A
Sbjct: 395 GDPQRLKQILTNLVGNAIKFTQGGTVAVRAMLEDESDDRA 434
>sptr|Q9KPC0|Q9KPC0 Sensor histidine kinase/response regulator.
Length = 927
Score = 96.3 bits (238), Expect = 2e-19
Identities = 41/90 (45%), Positives = 70/90 (77%)
Frame = +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
+ ND+LD +K+EAGKL LE +PF+ + ++++V++L ++ + EK +E+ + + +P+ V+
Sbjct: 342 IINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVV 401
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R +Q+LTNLVGN++KFTERG++ V V
Sbjct: 402 GDPLRIQQVLTNLVGNSIKFTERGNIDVSV 431
Database: /db/trembl-ebi/tmp/swall
Posted date: Nov 7, 2003 8:22 PM
Number of letters in database: 415,658,970
Number of sequences in database: 1,302,759
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 368,248,362
Number of Sequences: 1302759
Number of extensions: 7353166
Number of successful extensions: 20083
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19797
length of database: 415,658,970
effective HSP length: 117
effective length of database: 263,236,167
effective search space used: 21585365694
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)