blastxQAW3d03.yg.2.1.n.xseq.html

BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAW3d03.yg.2.1
         (557 letters)

Database: /db/trembl-ebi/tmp/swall 
           1,165,224 sequences; 374,374,308 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

   sptr|Q852H8|Q852H8 Putative histidine kinase.                         201  6e-51
   sptr|Q9FRY7|Q9FRY7 Histidine kinase 1.                                139  2e-32
   sptr|Q9C5T8|Q9C5T8 Cytokinin receptor CRE1b.                          139  2e-32
   sptr|Q9C5U0|Q9C5U0 Histidine kinase.                                  139  2e-32
   sptr|Q9C5T9|Q9C5T9 Cytokinin receptor CRE1a.                          139  2e-32
   sptr|Q9SIT0|Q9SIT0 Putative histidine kinase (Putative histidine...   139  2e-32
   sptrnew|AAP53311|AAP53311 Putative histidine kinase.                  115  2e-25
   sptr|Q8S6P5|Q8S6P5 Putative histidine kinase.                         115  2e-25
   sptr|Q9C5U2|Q9C5U2 Histidine kinase.                                  111  6e-24
   sptr|Q9FKH3|Q9FKH3 Histidine kinase-like protein.                     111  6e-24
   sptr|Q8L8I6|Q8L8I6 Cytokinin receptor.                                107  8e-23
   sptr|Q9C5U1|Q9C5U1 Histidine kinase.                                  106  2e-22
   sptr|Q8RYG4|Q8RYG4 Putative histidine kinase.                         100  8e-21
   sptr|Q9FZK3|Q9FZK3 F17L21.11.                                          96  3e-19

>sptr|Q852H8|Q852H8 Putative histidine kinase.
          Length = 1013

 Score =  201 bits (510), Expect = 6e-51
 Identities = 109/177 (61%), Positives = 113/177 (63%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYH 353
           AP +  QE    I   D    EE     LR+ A+G    TR  RLMSNH  VV   PVY 
Sbjct: 173 APVIYSQETISYIEGLDVMSGEEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYL 232

Query: 352 AXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMY 173
                D   EDR AA AG   GAFDVESLV N  RQLAGNQ LVVNVYDVTN SNPLVMY
Sbjct: 233 VDLPNDTAVEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMY 292

Query: 172 XSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
            SEVPL  PS SH   LDFGDP RKH MVCRYR   HV  SAI+TPSGVFVICMLVG
Sbjct: 293 GSEVPLGIPSPSHTYTLDFGDPLRKHQMVCRYRNKLHVSWSAITTPSGVFVICMLVG 349


>sptr|Q9FRY7|Q9FRY7 Histidine kinase 1.
          Length = 974

 Score =  139 bits (350), Expect = 2e-32
 Identities = 79/178 (44%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    EE      R+  +G    T   RL+ SNH  VV    VY
Sbjct: 149 APVIFSQDTVSYLARIDMMSGEEDRENIFRARTTGKAVLTNPFRLLGSNHLGVVLTFAVY 208

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 D   E R  A  G   GAFDVESLV N   +LAGNQ +VVNVYDVTN S+ +V+
Sbjct: 209 RPDLPADASVEQRVEATIGYLGGAFDVESLVENLLSKLAGNQDIVVNVYDVTNASDAMVL 268

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y            H+ MLDFGDPFRKH M CRYR    +P SAI+ P G FVI ML+G
Sbjct: 269 YGPSSLDEQVPFLHVSMLDFGDPFRKHEMRCRYRQKLPMPWSAITNPLGTFVIWMLLG 326


>sptr|Q9C5T8|Q9C5T8 Cytokinin receptor CRE1b.
          Length = 1080

 Score =  139 bits (350), Expect = 2e-32
 Identities = 77/178 (43%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    EE     LR+  +G    T   RL+ ++H  VV   PVY
Sbjct: 262 APVIFSQDSVSYLESLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVY 321

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
            +    +   E+R AA AG   GAFDVESLV N   QLAGNQ +VV+VYD+TN S+PLVM
Sbjct: 322 KSSLPENPTVEERIAATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVM 381

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y ++      S SH   LDFGDPFRKH M+CRY     +P + ++T    F I  LVG
Sbjct: 382 YGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVG 439


>sptr|Q9C5U0|Q9C5U0 Histidine kinase.
          Length = 1080

 Score =  139 bits (350), Expect = 2e-32
 Identities = 77/178 (43%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    EE     LR+  +G    T   RL+ ++H  VV   PVY
Sbjct: 262 APVIFSQDSVSYLESLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVY 321

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
            +    +   E+R AA AG   GAFDVESLV N   QLAGNQ +VV+VYD+TN S+PLVM
Sbjct: 322 KSSLPENPTVEERIAATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVM 381

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y ++      S SH   LDFGDPFRKH M+CRY     +P + ++T    F I  LVG
Sbjct: 382 YGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVG 439


>sptr|Q9C5T9|Q9C5T9 Cytokinin receptor CRE1a.
          Length = 1057

 Score =  139 bits (350), Expect = 2e-32
 Identities = 77/178 (43%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    EE     LR+  +G    T   RL+ ++H  VV   PVY
Sbjct: 239 APVIFSQDSVSYLESLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVY 298

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
            +    +   E+R AA AG   GAFDVESLV N   QLAGNQ +VV+VYD+TN S+PLVM
Sbjct: 299 KSSLPENPTVEERIAATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVM 358

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y ++      S SH   LDFGDPFRKH M+CRY     +P + ++T    F I  LVG
Sbjct: 359 YGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVG 416


>sptr|Q9SIT0|Q9SIT0 Putative histidine kinase (Putative histidine
           kinase receptor).
          Length = 1057

 Score =  139 bits (350), Expect = 2e-32
 Identities = 77/178 (43%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    EE     LR+  +G    T   RL+ ++H  VV   PVY
Sbjct: 239 APVIFSQDSVSYLESLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVY 298

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
            +    +   E+R AA AG   GAFDVESLV N   QLAGNQ +VV+VYD+TN S+PLVM
Sbjct: 299 KSSLPENPTVEERIAATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVM 358

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y ++      S SH   LDFGDPFRKH M+CRY     +P + ++T    F I  LVG
Sbjct: 359 YGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVG 416


>sptrnew|AAP53311|AAP53311 Putative histidine kinase.
          Length = 925

 Score =  115 bits (289), Expect = 2e-25
 Identities = 71/178 (39%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  QE    I   D    +E     LRS A+G    T    L+ SNH  VV    VY
Sbjct: 127 APVIFSQETVKHIISVDMMSGKEDRDNILRSRATGKGALTAPFPLLKSNHLGVVLTFTVY 186

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 D   E+R  A  G    +FDV SLV     QLA  Q +VV +YD+TN + P  M
Sbjct: 187 KYDLPPDATPEERIEATLGYLGASFDVPSLVERLLEQLASKQKIVVRLYDITNHTYPTKM 246

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y S+V        HI  +DFGDP RKH M CR++  P +P SAI   S V +I +LVG
Sbjct: 247 YDSDV--IASDDLHISNIDFGDPTRKHVMHCRFKHAPSLPWSAIMISSAVAIIVLLVG 302


>sptr|Q8S6P5|Q8S6P5 Putative histidine kinase.
          Length = 925

 Score =  115 bits (289), Expect = 2e-25
 Identities = 71/178 (39%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  QE    I   D    +E     LRS A+G    T    L+ SNH  VV    VY
Sbjct: 127 APVIFSQETVKHIISVDMMSGKEDRDNILRSRATGKGALTAPFPLLKSNHLGVVLTFTVY 186

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 D   E+R  A  G    +FDV SLV     QLA  Q +VV +YD+TN + P  M
Sbjct: 187 KYDLPPDATPEERIEATLGYLGASFDVPSLVERLLEQLASKQKIVVRLYDITNHTYPTKM 246

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y S+V        HI  +DFGDP RKH M CR++  P +P SAI   S V +I +LVG
Sbjct: 247 YDSDV--IASDDLHISNIDFGDPTRKHVMHCRFKHAPSLPWSAIMISSAVAIIVLLVG 302


>sptr|Q9C5U2|Q9C5U2 Histidine kinase.
          Length = 1176

 Score =  111 bits (277), Expect = 6e-24
 Identities = 69/178 (38%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  QE    I   D    EE     LR+ ASG    T   +L+ SNH  VV    VY
Sbjct: 379 APVIFAQETVSHIVSVDMMSGEEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVY 438

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 D   E R  A  G    ++D+ SLV     QLA  Q + V+VYD TN S  + M
Sbjct: 439 DTSLPPDATEEQRVEATIGYLGASYDMPSLVEKLLHQLASKQTIAVDVYDTTNTSGLIKM 498

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y SE+     S  HI  LDFGDP R H M CR++    +P +AI+    V VI  LVG
Sbjct: 499 YGSEI--GDISEQHISSLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFLVG 554


>sptr|Q9FKH3|Q9FKH3 Histidine kinase-like protein.
          Length = 1173

 Score =  111 bits (277), Expect = 6e-24
 Identities = 69/178 (38%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  QE    I   D    EE     LR+ ASG    T   +L+ SNH  VV    VY
Sbjct: 379 APVIFAQETVSHIVSVDMMSGEEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVY 438

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 D   E R  A  G    ++D+ SLV     QLA  Q + V+VYD TN S  + M
Sbjct: 439 DTSLPPDATEEQRVEATIGYLGASYDMPSLVEKLLHQLASKQTIAVDVYDTTNTSGLIKM 498

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y SE+     S  HI  LDFGDP R H M CR++    +P +AI+    V VI  LVG
Sbjct: 499 YGSEI--GDISEQHISSLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFLVG 554


>sptr|Q8L8I6|Q8L8I6 Cytokinin receptor.
          Length = 1041

 Score =  107 bits (267), Expect = 8e-23
 Identities = 66/178 (37%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    I   D    +E     LR+ ASG    T   +L+ SNH  VV    VY
Sbjct: 231 APVIFAQKTVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVY 290

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
           +     +   E R  A  G    ++DV SLV     QLA  Q + VNVYD T+ S P+ M
Sbjct: 291 NTDLPPEATREQRINATVGYLGASYDVPSLVEKLLHQLASKQTIAVNVYDTTDKSAPIKM 350

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
           Y             I  LDFGDP RKH M CR++  P  P +AI    GV VI +L+G
Sbjct: 351 YGDAA--NDTGLPRISQLDFGDPSRKHEMHCRFKQKPPPPWTAIIASVGVLVITLLLG 406


>sptr|Q9C5U1|Q9C5U1 Histidine kinase.
          Length = 1036

 Score =  106 bits (264), Expect = 2e-22
 Identities = 61/177 (34%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    +E     LR+ +SG    T    L+ +N   V+    VY
Sbjct: 242 APVIFAQDTVSHVVSLDMLSGKEDRENVLRARSSGKGVLTAPFPLIKTNRLGVILTFAVY 301

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 +   ++R  A  G   G FD+ESLV N  +QLA  Q ++VNVYD+TN S P+ M
Sbjct: 302 KRDLPSNATPKERIEATNGYLGGVFDIESLVENLLQQLASKQTILVNVYDITNHSQPISM 361

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLV 5
           Y + V         +  L FGDP RKH M CR++  P  P  ++ T  G+ VI +LV
Sbjct: 362 YGTNV--SADGLERVSPLIFGDPLRKHEMRCRFKQKPPWPVLSMVTSFGILVIALLV 416


>sptr|Q8RYG4|Q8RYG4 Putative histidine kinase.
          Length = 1023

 Score =  100 bits (250), Expect = 8e-21
 Identities = 57/177 (32%), Positives = 83/177 (46%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYH 353
           AP +  Q+    +   D     E     LR+  SG    T   +L++N   V+    VY 
Sbjct: 233 APVIFAQDAYKHVISFDMLSGNEDRDNILRARKSGKGVLTAPFKLLNNRLGVILTYTVYK 292

Query: 352 AXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMY 173
                     +R  A  G   G FD+++LV    +QLA  + ++VNVYD TN  +P+ MY
Sbjct: 293 YELPAYARPHERIQAAIGYLGGIFDIQALVEKLLKQLASQESIMVNVYDTTN-ESPISMY 351

Query: 172 XSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
             +         H+ +L+FGDP RKH M CR+   P  P  AI++  G  VI +L G
Sbjct: 352 GDD---TGSGMCHVSVLNFGDPSRKHEMHCRFEKKPPWPWLAITSSFGTLVIALLTG 405


>sptr|Q9FZK3|Q9FZK3 F17L21.11.
          Length = 1092

 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
 Frame = -2

Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLM-SNHXXVVXXXPVY 356
           AP +  Q+    +   D    +E     LR+ +SG    T    L+ +N   V+    VY
Sbjct: 242 APVIFAQDTVSHVVSLDMLSGKEDRENVLRARSSGKGVLTAPFPLIKTNRLGVILTFAVY 301

Query: 355 HAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVM 176
                 +   ++R  A  G   G FD+ESLV N  +QLA  Q ++VNVYD+TN S P+ M
Sbjct: 302 KRDLPSNATPKERIEATNGYLGGVFDIESLVENLLQQLASKQTILVNVYDITNHSQPISM 361

Query: 175 YXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPH 62
           Y + V         +  L FGDP RKH M CRY    H
Sbjct: 362 YGTNV--SADGLERVSPLIFGDPLRKHEMRCRYLQLAH 397


  Database: /db/trembl-ebi/tmp/swall
    Posted date:  Jul 18, 2003  8:26 PM
  Number of letters in database: 374,374,308
  Number of sequences in database:  1,165,224
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,413,346
Number of Sequences: 1165224
Number of extensions: 2677070
Number of successful extensions: 3289
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3280
length of database: 374,374,308
effective HSP length: 115
effective length of database: 240,373,548
effective search space used: 16826148360
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)