TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCT19a08.yg.2.1
(645 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spi... 259 2e-068
gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium gra... 259 2e-068
gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDN... 237 9e-062
gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aesti... 174 1e-054
gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aes... 127 4e-037
gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated... 127 4e-037
gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated se... 127 4e-037
gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: L... 146 2e-034
gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis... 122 2e-034
gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole pla... 145 4e-034
gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Whe... 143 2e-033
gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Whe... 143 2e-033
gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stresse... 143 2e-033
gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: L... 143 2e-033
gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring whe... 113 4e-028
gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA... 112 3e-024
gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aes... 108 5e-023
gb|DR741461.1|DR741461 FGAS030516 Triticum aestivum FGAS: L... 77 7e-023
gb|CV763906.1|CV763906 FGAS058289 Triticum aestivum FGAS: L... 77 7e-023
gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA... 108 7e-023
gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDN... 105 4e-022
gb|CK209214.1|CK209214 FGAS020967 Triticum aestivum FGAS: L... 74 4e-022
gb|CB307413.1|CB307413 HFIG398 Hessian fly infested cDNA li... 78 5e-022
gb|DR737016.1|DR737016 FGAS082386 Triticum aestivum FGAS: L... 77 6e-022
gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: L... 75 2e-021
gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: L... 103 2e-021
>gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0904_G11_N22, mRNA sequence
Length = 537
Score = 259 bits (560), Expect = 2e-068
Identities = 100/122 (81%), Positives = 111/122 (90%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGL SC+PPEVG+LREVTVFDVSFN+L GPLP +VA M+KVEQLD+AHN LSG VPEA
Sbjct: 143 INNGLTSCLPPEVGMLREVTVFDVSFNALAGPLPPEVARMQKVEQLDIAHNLLSGTVPEA 322
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T SYNFFTGEPPSCARV+P+DGDRRNCLPNRP QR PQQCAAFY++PPVD
Sbjct: 323 VCDLPRLKNFTFSYNFFTGEPPSCARVLPADGDRRNCLPNRPAQRMPQQCAAFYARPPVD 502
Query: 371 CA 376
CA
Sbjct: 503 CA 508
Score = 199 bits (429), Expect = 3e-050
Identities = 90/122 (73%), Positives = 93/122 (76%)
Frame = -1 / -1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQSTGG * AAHCCG+R GR GRQF SPS G TRAQDGGSPVKKL*E V+FLSRGR+
Sbjct: 507 AQSTGGRA*KAAHCCGMRWAGRFGRQFRRSPSAGRTRAQDGGSPVKKL*EKVKFLSRGRS 328
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
ASGT PD RLCA SSCST I AT GSGP LKLTS TVTSRS PTSGG E RPL
Sbjct: 327 HTASGTVPDSRLCAMSSCSTFCILATSGGSGPARALKLTSNTVTSRSIPTSGGRHEVRPL 148
Query: 15 LM 10
LM
Sbjct: 147 LM 142
Score = 180 bits (388), Expect = 1e-044
Identities = 82/111 (73%), Positives = 87/111 (78%)
Frame = -3 / -3
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR +E GALLR AL GAV +AVP V V R DARAGRRLAGEEVVG+G+VLEP E A
Sbjct: 502 VDGRAGIESGALLRHALGGAVWEAVPAVAVGRQDARAGRRLAGEEVVGEGEVLEPWEVAH 323
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
GLR GP Q VVRDV+LLHL HPGHL RQRA E VEADVE HLPE DLRR
Sbjct: 322 GLRHGPRQQVVRDVELLHLLHPGHLRRQRACEGVEADVEHRHLPEHPDLRR 170
>gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3892_G05_M10,
mRNA sequence
Length = 653
Score = 259 bits (560), Expect = 2e-068
Identities = 100/122 (81%), Positives = 111/122 (90%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGL SC+PPEVG+LREVTVFDVSFN+L GPLP +VA M+KVEQLD+AHN LSG VPEA
Sbjct: 252 INNGLTSCLPPEVGMLREVTVFDVSFNALAGPLPPEVARMQKVEQLDIAHNLLSGTVPEA 431
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T SYNFFTGEPPSCARV+P+DGDRRNCLPNRP QR PQQCAAFY++PPVD
Sbjct: 432 VCDLPRLKNFTFSYNFFTGEPPSCARVLPADGDRRNCLPNRPAQRMPQQCAAFYARPPVD 611
Query: 371 CA 376
CA
Sbjct: 612 CA 617
Score = 199 bits (429), Expect = 3e-050
Identities = 90/122 (73%), Positives = 93/122 (76%)
Frame = -1 / -2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQSTGG * AAHCCG+R GR GRQF SPS G TRAQDGGSPVKKL*E V+FLSRGR+
Sbjct: 616 AQSTGGRA*KAAHCCGMRWAGRFGRQFRRSPSAGRTRAQDGGSPVKKL*EKVKFLSRGRS 437
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
ASGT PD RLCA SSCST I AT GSGP LKLTS TVTSRS PTSGG E RPL
Sbjct: 436 HTASGTVPDSRLCAMSSCSTFCILATSGGSGPARALKLTSNTVTSRSIPTSGGRHEVRPL 257
Query: 15 LM 10
LM
Sbjct: 256 LM 251
Score = 180 bits (388), Expect = 1e-044
Identities = 82/111 (73%), Positives = 87/111 (78%)
Frame = -3 / -1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR +E GALLR AL GAV +AVP V V R DARAGRRLAGEEVVG+G+VLEP E A
Sbjct: 611 VDGRAGIESGALLRHALGGAVWEAVPAVAVGRQDARAGRRLAGEEVVGEGEVLEPWEVAH 432
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
GLR GP Q VVRDV+LLHL HPGHL RQRA E VEADVE HLPE DLRR
Sbjct: 431 GLRHGPRQQVVRDVELLHLLHPGHLRRQRACEGVEADVEHRHLPEHPDLRR 279
>gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDNA clone B04_h116_plate_11, mRNA
sequence
Length = 581
Score = 237 bits (512), Expect = 9e-062
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGL+SC+PPE+G LRE+TV DVS N L GPL Q+VAG+RK+EQL+VAHN LSG +P+A
Sbjct: 213 INNGLESCLPPEIGRLRELTVLDVSHNQLAGPLTQEVAGLRKLEQLNVAHNLLSGPIPQA 392
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+CALPRLKN T SYNFFTGEPP+CARVVP DR NCLPNRP+QRT QQCAAFY+ PPV+
Sbjct: 393 VCALPRLKNFTFSYNFFTGEPPACARVVPRGSDRDNCLPNRPSQRTRQQCAAFYAHPPVN 572
Query: 371 CA 376
CA
Sbjct: 573 CA 578
Score = 168 bits (362), Expect = 4e-041
Identities = 79/125 (63%), Positives = 85/125 (68%)
Frame = -1 / -2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG * AAHCC VR GR GRQ S GTTRA GGSPVKKL E V+FLSRGRA
Sbjct: 577 AQLTGGWA*KAAHCCRVR*EGRFGRQLSRSLPRGTTRAHAGGSPVKKLYEKVKFLSRGRA 398
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G P+ RLCAT SCS+ PAT C SGP S L LTS TV+SR +P SGG +SRPL
Sbjct: 397 HTAWGIGPESRLCATLSCSSFLSPATSCVSGPASWLWLTSSTVSSRRRPISGGRHDSRPL 218
Query: 15 LMGWI 1
LM I
Sbjct: 217 LMSKI 203
Score = 144 bits (308), Expect = 1e-033
Identities = 67/111 (60%), Positives = 78/111 (70%)
Frame = -3 / -1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR+ VE GALL R L A+ QAV PV HDARA RRL GEE+V +G+VLEPR+
Sbjct: 572 VDGRVGVEGGALLPRPLRRAIRQAVVPVAAPGHDARARRRLPGEEIV*EGEVLEPRQSTH 393
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
GL PG+ VVRDV+LL L P HLLR+RA E V AD+E LP+ ADLRR
Sbjct: 392 GLGYRPGEQVVRDVELLQLPQPRHLLRERAGELVVADIEHRELPQAADLRR 240
>gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.d13
5' end, mRNA sequence
Length = 554
Score = 174 bits (374), Expect(2) = 1e-054
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +2 / -1
Query: 113 QQVAGMRKVEQLDVAHNRLSGAVPEAICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
Q+VAG+RK+EQL+VAHN LSG +P+A+CALPRLKN T SYNFFTGEPP+CARVVP DR
Sbjct: 338 QEVAGLRKLEQLNVAHNLLSGPIPQAVCALPRLKNFTFSYNFFTGEPPACARVVPRGSDR 159
Query: 293 RNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
NCLPNRP+QRT QQCAA Y+ PPV+CA
Sbjct: 158 DNCLPNRPSQRTRQQCAAXYAHPPVNCA 75
Score = 117 bits (251), Expect(2) = 2e-035
Identities = 54/88 (61%), Positives = 57/88 (64%)
Frame = -1 / +1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG AAHCC VR GR GRQ S GTTRA GGSPVKKL E V+FLSRG A
Sbjct: 76 AQLTGGWAXKAAHCCRVR*EGRFGRQLSRSLPRGTTRAHAGGSPVKKLYEKVKFLSRGSA 255
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCC 112
A G P+ RLCAT SCS+ PAT C
Sbjct: 256 HTACGIGPESRLCATLSCSSFLSPATSC 339
Score = 115 bits (246), Expect = 4e-025
Identities = 54/88 (61%), Positives = 63/88 (71%)
Frame = -3 / +3
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR+ V GALL R L GA+ QAV PV HDARA RRL GEEVV +G++LEPR+ A
Sbjct: 81 VDGRVGVXGGALLPRPLRGAIRQAVVPVAAPGHDARARRRLPGEEVV*EGEILEPRQRAH 260
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQ 107
GLR G+ VVRDV+LL L P HLLR+
Sbjct: 261 GLRYRAGEQVVRDVELLQLPQPRHLLRE 344
Score = 60.2 bits (125), Expect(2) = 1e-054
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPL 109
INNGL+SC+PPE+G RE+TV DVS N L GPL
Sbjct: 441 INNGLESCLPPELGRXRELTVLDVSHNQLAGPL 343
Score = 52.4 bits (108), Expect(2) = 2e-035
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -1 / +2
Query: 108 SGPTSELKLTSKTVTSRSKPTSGGTQESRPLLMGWI 1
SGP S L LTS TV+SR +P+SGG +SRPLLM I
Sbjct: 344 SGPASWLWLTSSTVSSRXRPSSGGRHDSRPLLMNKI 451
>gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aestivum cDNA clone AZO2103F01,
mRNA sequence
Length = 749
Score = 127 bits (273), Expect(2) = 4e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+S N +VG LP + MR +EQL+VA+N L+G +PE+
Sbjct: 557 LNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLAGEIPES 378
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 377 ICALPNLKNFTYSHNFFCGEPHRCLEV 297
Score = 47.8 bits (98), Expect(2) = 4e-037
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR+NC+ RP QR +QC F +PP CA
Sbjct: 299 VPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCA 195
>gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 711
Score = 127 bits (273), Expect(2) = 4e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+S N +VG LP + MR +EQL+VA+N L+G +PE+
Sbjct: 587 LNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLAGEIPES 408
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 407 ICALPNLKNFTYSHNFFCGEPHRCLEV 327
Score = 47.8 bits (98), Expect(2) = 4e-037
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR+NC+ RP QR +QC F +PP CA
Sbjct: 329 VPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCA 225
>gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 625
Score = 127 bits (273), Expect(2) = 4e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+S N +VG LP + MR +EQL+VA+N L+G +PE+
Sbjct: 164 LNSGISSCIPPEIGKLDKLTVLDLSSNGIVGKLPDTIGNMRALEQLNVANNMLAGEIPES 343
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 344 ICALPNLKNFTYSHNFFCGEPHRCLEV 424
Score = 47.8 bits (98), Expect(2) = 4e-037
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR+NC+ RP QR +QC F +PP CA
Sbjct: 422 VPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCA 526
>gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 146 bits (314), Expect = 2e-034
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGMR +EQLDVAHN L+G +PE
Sbjct: 647 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMRALEQLDVAHNELAGHIPEG 468
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F+GEP C + +D
Sbjct: 467 ICALPRLANFTYSYNYFSGEPERCTALRRND 375
>gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3461_A09_B17, mRNA sequence
Length = 517
Score = 122 bits (260), Expect(2) = 2e-034
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +2 / +3
Query: 221 TISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
T SYNFFTGEPPSCARVVP+DGDRRNCLPNRP QR PQQCAAF ++PPVDCA
Sbjct: 6 TFSYNFFTGEPPSCARVVPADGDRRNCLPNRPAQRMPQQCAAFSARPPVDCA 161
Score = 95.0 bits (201), Expect(4) = 3e-028
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = -1 / -1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVR 217
AQSTGG AAHCCG+R GRLGRQF SPS GTTRAQDGGSPVKKL*E V+
Sbjct: 160 AQSTGGRAEKAAHCCGMRWAGRLGRQFRRSPSAGTTRAQDGGSPVKKL*EKVK 2
Score = 44.6 bits (91), Expect(2) = 2e-034
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRPVAT IP+A+R+A+A +PMI
Sbjct: 206 ASIPRPVATSIPHAIRVAAAASTLPMI 286
Score = 36.8 bits (74), Expect(4) = 3e-028
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG + A A R A GI VATGRGM+A
Sbjct: 285 IIGNVEAAAATRMAWGILVATGRGMLA 205
Score = 28.1 bits (55), Expect(4) = 3e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 615 LLYAGSYQSRT 583
LLYAGSYQSRT
Sbjct: 441 LLYAGSYQSRT 409
Score = 21.7 bits (41), Expect(4) = 3e-028
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 558 LTTYNCNGEL 529
+TTY C+GEL
Sbjct: 390 MTTYFCDGEL 361
>gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4166_D03_H06, mRNA sequence
Length = 434
Score = 145 bits (312), Expect = 4e-034
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGMR +EQLDVAHN L+G +PE
Sbjct: 24 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMRALEQLDVAHNELAGHIPEG 203
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F GEP C + +D
Sbjct: 204 ICALPRLANFTYSYNYFCGEPERCTALRRND 296
>gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD010.D12, mRNA
sequence
Length = 400
Score = 143 bits (306), Expect = 2e-033
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE
Sbjct: 117 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEG 296
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F GEP C + +D
Sbjct: 297 ICALPRLANFTYSYNYFCGEPERCMALRRND 389
>gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD013.D05, mRNA
sequence
Length = 402
Score = 143 bits (306), Expect = 2e-033
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE
Sbjct: 117 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEG 296
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F GEP C + +D
Sbjct: 297 ICALPRLANFTYSYNYFCGEPERCMALRRND 389
>gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_D09_H18, mRNA sequence
Length = 486
Score = 143 bits (306), Expect = 2e-033
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE
Sbjct: 27 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEG 206
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F GEP C + +D
Sbjct: 207 ICALPRLANFTYSYNYFCGEPERCMALRRND 299
>gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1178
Score = 143 bits (306), Expect = 2e-033
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE
Sbjct: 582 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEG 403
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
ICALPRL N T SYN+F GEP C + +D
Sbjct: 402 ICALPRLANFTYSYNYFCGEPERCMALRRND 310
>gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3304_E01_J02,
mRNA sequence
Length = 421
Score = 113 bits (241), Expect(2) = 4e-028
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
I++ L C+PP+VG+LR+VTVFDVS N L GPLP V G+ V++L+VA N L GAVP +
Sbjct: 25 IDDDLTGCIPPQVGMLRKVTVFDVSGNGLQGPLPATVTGLVAVQELNVAGNLLEGAVPAS 204
Query: 191 ICALPRLKNLTISYNFFTGEP 253
+C LP L+N T NFF+G P
Sbjct: 205 VCGLPSLRNFTYEDNFFSGRP 267
Score = 32.2 bits (64), Expect(2) = 4e-028
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 290 RRNCLPNRPTQRTPQQCAAFYSQP 361
R NC+ P QR P QCAA ++P
Sbjct: 295 RWNCILGAPAQRPPAQCAAAAARP 366
>gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13a05 5', mRNA sequence
Length = 524
Score = 112 bits (240), Expect = 3e-024
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N G LP+ + M +E ++V +N LSGAVPE
Sbjct: 178 LNTSISSCIPPEIGKLKKLKVLDLSHNEFAGELPESIGDMESLEVINVGYNMLSGAVPET 357
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSD 283
IC LP LKNLT+ N+F EP SC V D
Sbjct: 358 ICLLPNLKNLTVVGNYFCEEPVSCLHVPRRD 450
>gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aestivum cDNA clone G118121O12,
mRNA sequence
Length = 541
Score = 108 bits (231), Expect = 5e-023
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = +2 / -2
Query: 77 DVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEAICALPRLKNLTISYNFFTGEPP 256
DVSFN L G LP+ +AGMR +EQLDVAHN L+G +PE ICALPRL N T SYN+F GEP
Sbjct: 483 DVSFNQLQGTLPESMAGMRALEQLDVAHNELAGHIPEGICALPRLANFTYSYNYFCGEPE 304
Query: 257 SCARVVPSD 283
C + +D
Sbjct: 303 RCTALRRND 277
>gb|DR741461.1|DR741461 FGAS030516 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1079
Score = 76.7 bits (161), Expect(3) = 7e-023
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E+G+L + TV D N L GP+P + + VEQL++ NRL G VP+A
Sbjct: 156 LNNQLSGCLPNELGMLTKTTVIDAGMNQLTGPIPSSFSCLSSVEQLNLGGNRLYGQVPDA 335
Query: 191 ICAL 202
+C L
Sbjct: 336 LCKL 347
Score = 36.3 bits (73), Expect(3) = 7e-023
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 290 RRNCLPNRPTQRTPQQCAAFYSQP 361
+ NC+P QR P +CA+F SQP
Sbjct: 453 KHNCIPGFANQRGPAECASFLSQP 524
Score = 32.2 bits (64), Expect(3) = 7e-023
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 206 RLKNLTISYNFFTGEPPSCARVV 274
RL NLT+S N+FT P+C+ ++
Sbjct: 363 RLSNLTLSGNYFTSVGPACSALI 431
>gb|CV763906.1|CV763906 FGAS058289 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 76.7 bits (161), Expect(3) = 7e-023
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E+G+L + TV D N L GP+P + + VEQL++ NRL G VP+A
Sbjct: 244 LNNQLSGCLPNELGMLTKTTVIDAGMNQLTGPIPSSFSCLSSVEQLNLGGNRLYGQVPDA 423
Query: 191 ICAL 202
+C L
Sbjct: 424 LCKL 435
Score = 36.3 bits (73), Expect(3) = 7e-023
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 290 RRNCLPNRPTQRTPQQCAAFYSQP 361
+ NC+P QR P +CA+F SQP
Sbjct: 541 KHNCIPGFANQRGPAECASFLSQP 612
Score = 32.2 bits (64), Expect(3) = 7e-023
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 206 RLKNLTISYNFFTGEPPSCARVV 274
RL NLT+S N+FT P+C+ ++
Sbjct: 451 RLSNLTLSGNYFTSVGPACSALI 519
>gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21g20 5', mRNA sequence
Length = 600
Score = 108 bits (230), Expect = 7e-023
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE
Sbjct: 409 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEG 588
Query: 191 ICAL 202
ICAL
Sbjct: 589 ICAL 600
>gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN004.C06, mRNA sequence
Length = 569
Score = 105 bits (225), Expect = 4e-022
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +2 / -2
Query: 77 DVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEAICALPRLKNLTISYNFFTGEPP 256
DVSFN L G LP+ +AGM +EQLDVAHN L+G +PE ICALPRL N T SYN+F GEP
Sbjct: 565 DVSFNQLQGTLPESMAGMHALEQLDVAHNELAGHIPEGICALPRLANFTYSYNYFCGEPE 386
Query: 257 SCARVVPSD 283
C + +D
Sbjct: 385 RCMALRRND 359
>gb|CK209214.1|CK209214 FGAS020967 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1181
Score = 73.9 bits (155), Expect(3) = 4e-022
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N L C+P E+G+L + TV D N L GP+P + + VEQL++ NRL G VP+A
Sbjct: 797 LNKQLSGCLPNELGMLTKTTVIDAGMNQLTGPIPSSFSCLSSVEQLNLGGNRLYGQVPDA 618
Query: 191 ICAL 202
+C L
Sbjct: 617 LCKL 606
Score = 36.3 bits (73), Expect(3) = 4e-022
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / -1
Query: 290 RRNCLPNRPTQRTPQQCAAFYSQP 361
+ NC+P QR P +CA+F SQP
Sbjct: 500 KHNCIPGFANQRGPAECASFLSQP 429
Score = 32.2 bits (64), Expect(3) = 4e-022
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / -1
Query: 206 RLKNLTISYNFFTGEPPSCARVV 274
RL NLT+S N+FT P+C+ ++
Sbjct: 590 RLSNLTLSGNYFTSVGPACSALI 522
>gb|CB307413.1|CB307413 HFIG398 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 528
Score = 77.6 bits (163), Expect(3) = 5e-022
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2 / +2
Query: 2 IHPINNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAV 181
+H +NN L C+P E+G+L + V D N L GP+P + + VEQL++ NRL G V
Sbjct: 116 MHLLNNQLSGCLPNELGMLTKTAVIDAGMNQLTGPIPSSFSCLNSVEQLNLGGNRLYGQV 295
Query: 182 PEAICAL 202
P+A+C L
Sbjct: 296 PDALCKL 316
Score = 32.7 bits (65), Expect(3) = 5e-022
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 296 NCLPNRPTQRTPQQCAAFYSQP 361
NC+P QR +CA+F SQP
Sbjct: 428 NCIPGVANQRAAAECASFLSQP 493
Score = 32.2 bits (64), Expect(3) = 5e-022
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 206 RLKNLTISYNFFTGEPPSCARVV 274
RL NLT+S N+FT P+C+ ++
Sbjct: 332 RLSNLTLSGNYFTSVGPACSALI 400
>gb|DR737016.1|DR737016 FGAS082386 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1144
Score = 76.7 bits (161), Expect(3) = 6e-022
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E+G+L + TV D N L GP+P + + VEQL++ NRL G VP+A
Sbjct: 538 LNNQLSGCLPNELGMLTKTTVIDAGMNQLTGPIPSSFSCLSSVEQLNLGGNRLYGQVPDA 717
Query: 191 ICAL 202
+C L
Sbjct: 718 LCKL 729
Score = 33.1 bits (66), Expect(3) = 6e-022
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 290 RRNCLPNRPTQRTPQQCAAFYSQP 361
+ NC+P QR P++CA+F P
Sbjct: 835 KHNCIPGFANQRGPRECASFLDHP 906
Score = 32.2 bits (64), Expect(3) = 6e-022
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 206 RLKNLTISYNFFTGEPPSCARVV 274
RL NLT+S N+FT P+C+ ++
Sbjct: 745 RLSNLTLSGNYFTSVGPACSALI 813
>gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 75.3 bits (158), Expect(2) = 2e-021
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2 / -1
Query: 131 RKVEQLDVAHNRLSGAVPEAICALPRLKNLTISYNFFTGEPPSC 262
R +EQL+VA+N L+G +PE+ICALP LKNLT S+NFF GEP C
Sbjct: 570 RALEQLNVANNMLAGEIPESICALPNLKNLTYSHNFFCGEPHRC 439
Score = 47.8 bits (98), Expect(2) = 2e-021
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR+NC+ RP QR +QC F +PP CA
Sbjct: 433 VPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCA 329
>gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1120
Score = 103 bits (219), Expect = 2e-021
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G LRE+TV DVSFN L G LP+ +AGM +EQLDVAHN L+G + E
Sbjct: 749 LNSGIRSCIPPEIGWLRELTVLDVSFNQLQGTLPEVMAGMHALEQLDVAHNELAGHIREG 928
Query: 191 ICAL 202
ICAL
Sbjct: 929 ICAL 940
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 443,749,743
Number of Sequences: 636343
Number of extensions: 6612668
Number of successful extensions: 117254
Number of sequences better than 1.0e-020: 34
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14278644674
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)