TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN21e10.yg.2.1
(247 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: L... 163 4e-040
gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic flor... 160 3e-039
gb|BQ902766.1|BQ902766 Ta03_01c07_R Ta03_AAFC_ECORC_Fusariu... 155 7e-038
gb|CA501219.1|CA501219 WHE4030_G09_M18ZT Wheat meiotic anth... 155 7e-038
gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA... 153 4e-037
gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum... 135 8e-032
gb|CA682267.1|CA682267 wlm24.pk0031.b12 wlm24 Triticum aest... 122 1e-027
gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan s... 100 4e-021
gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA... 99 1e-020
gb|CL902576.1|CL902576 CSHC1951 1639HC library Triticum aes... 93 7e-019
gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA... 86 8e-017
gb|BE500826.1|BE500826 WHE0991-0994_B23_B23ZS Wheat pre-ant... 84 4e-016
gb|CD925510.1|CD925510 G750.117H07F010711 G750 Triticum aes... 77 5e-014
gb|CA497978.1|CA497978 WHE3236_G04_N08ZT Wheat meiotic anth... 47 4e-005
gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan s... 44 4e-004
gb|CA738110.1|CA738110 wpi2s.pk002.n24 wpi2s Triticum aesti... 29 0.12
gb|CA736855.1|CA736855 wpi1s.pk009.e5 wpi1s Triticum aestiv... 28 0.60
gb|AJ603109.1|AJ603109 AJ603109 T06 Triticum aestivum cDNA ... 25 0.73
gb|CA726412.1|CA726412 wet1s.pk003.f15 wet1s Triticum aesti... 22 0.76
gb|CA673922.1|CA673922 wlsu2.pk020.n19 wlsu2 Triticum aesti... 32 1.2
gb|CA746685.1|CA746685 wri2s.pk004.h11 wri2s Triticum aesti... 32 1.2
gb|CA746714.1|CA746714 wri2s.pk004.h23 wri2s Triticum aesti... 32 1.2
gb|DR732487.1|DR732487 FGAS078407 Triticum aestivum FGAS: T... 21 1.4
gb|CA672060.1|CA672060 wlsu2.pk015.l7 wlsu2 Triticum aestiv... 25 1.5
gb|DR732296.1|DR732296 FGAS078216 Triticum aestivum FGAS: T... 28 1.6
gb|BE414309.1|BE414309 SCU008.C10.R990714 ITEC SCU Wheat En... 32 1.6
gb|BQ606886.1|BQ606886 BRY_2762 wheat EST endosperm library... 32 1.6
gb|CA736007.1|CA736007 wpi1s.pk006.c19 wpi1s Triticum aesti... 32 1.6
gb|CA745351.1|CA745351 wri2s.pk001.e9 wri2s Triticum aestiv... 32 1.6
gb|CK200634.1|CK200634 FGAS009150 Triticum aestivum FGAS: L... 31 2.2
gb|CA739747.1|CA739747 wpi2s.pk010.g10 wpi2s Triticum aesti... 24 2.4
gb|CA736572.1|CA736572 wpi1s.pk007.b4 wpi1s Triticum aestiv... 26 2.6
gb|CA744368.1|CA744368 wri1s.pk007.j15 wri1s Triticum aesti... 31 3.0
gb|CA744469.1|CA744469 wri1s.pk007.j16 wri1s Triticum aesti... 31 3.0
gb|CK157762.1|CK157762 FGAS038924 Triticum aestivum FGAS: T... 31 3.0
gb|CV522512.1|CV522512 RP-182 Triticum aestivum subtracted,... 31 3.0
gb|AY772733.1| Triticum aestivum clone BAC TA1426L2, *** SE... 31 3.0
gb|CA735636.1|CA735636 wpi1s.pk004.c17 wpi1s Triticum aesti... 26 3.4
gb|DR732642.1|DR732642 FGAS078562 Triticum aestivum FGAS: T... 28 3.5
gb|CK152865.1|CK152865 FGAS035941 Triticum aestivum FGAS: T... 26 3.6
gb|CA742428.1|CA742428 wri1s.pk001.m17 wri1s Triticum aesti... 23 3.6
gb|CK160102.1|CK160102 FGAS041649 Triticum aestivum FGAS: T... 28 3.7
gb|BE442857.1|BE442857 WHE1107_E06_J11ZS Wheat etiolated se... 30 4.1
gb|CA672698.1|CA672698 wlsu2.pk018.d9 wlsu2 Triticum aestiv... 30 4.1
gb|CA738224.1|CA738224 wpi2s.pk006.m15 wpi2s Triticum aesti... 30 4.1
gb|CA739876.1|CA739876 wpi2s.pk010.f7 wpi2s Triticum aestiv... 30 4.1
gb|CA743059.1|CA743059 wri1s.pk002.g9 wri1s Triticum aestiv... 30 4.1
gb|CA743106.1|CA743106 wri1s.pk002.j20 wri1s Triticum aesti... 30 4.1
gb|AJ602703.1|AJ602703 AJ602703 T06 Triticum aestivum cDNA ... 30 4.1
emb|AX660680.1| Sequence 1037 from Patent WO03000906 30 4.1
gb|AJ603012.1|AJ603012 AJ603012 T06 Triticum aestivum cDNA ... 23 4.4
gb|AJ612063.1|AJ612063 AJ612063 Triticum turgidum subsp. du... 23 4.6
gb|CK156462.1|CK156462 FGAS037456 Triticum aestivum FGAS: T... 26 4.8
gb|CK159238.1|CK159238 FGAS040648 Triticum aestivum FGAS: T... 26 4.9
gb|CA736813.1|CA736813 wpi1s.pk008.h16 wpi1s Triticum aesti... 23 4.9
gb|CA744654.1|CA744654 wri1s.pk008.h14 wri1s Triticum aesti... 24 5.0
gb|BE401194.1|BE401194 CNW01PL0096 ITEC CNW Wheat Powdery M... 30 5.7
gb|CA643165.1|CA643165 wre1n.pk0071.f5 wre1n Triticum aesti... 30 5.7
gb|AL811189.1|AL811189 AL811189 d:37 Triticum aestivum cDNA... 30 5.7
gb|CA670007.1|CA670007 wlsu1.pk024.g14 wlsu1 Triticum aesti... 26 6.2
gb|AJ602914.1|AJ602914 AJ602914 T06 Triticum aestivum cDNA ... 22 6.2
gb|AJ603059.1|AJ603059 AJ603059 T06 Triticum aestivum cDNA ... 22 6.2
gb|AJ603173.1|AJ603173 AJ603173 T06 Triticum aestivum cDNA ... 22 6.3
gb|CA735567.1|CA735567 wpi1s.pk004.n6 wpi1s Triticum aestiv... 24 6.3
gb|CA674554.1|CA674554 wlsu2.pk024.k10 wlsu2 Triticum aesti... 25 6.5
gb|CK155953.1|CK155953 FGAS036841 Triticum aestivum FGAS: T... 25 6.5
gb|CA743038.1|CA743038 wri1s.pk002.k13 wri1s Triticum aesti... 23 6.5
gb|CV523024.1|CV523024 LP-34 Triticum aestivum subtracted, ... 23 6.9
gb|CA736148.1|CA736148 wpi1s.pk006.m4 wpi1s Triticum aestiv... 24 7.5
gb|BE404331.1|BE404331 WHE0441_A01_A01ZS Wheat etiolated se... 29 7.8
gb|BJ247274.1|BJ247274 BJ247274 Y. Ogihara unpublished cDNA... 29 7.8
gb|BJ288945.1|BJ288945 BJ288945 Y. Ogihara unpublished cDNA... 29 7.8
gb|BJ295229.1|BJ295229 BJ295229 Y. Ogihara unpublished cDNA... 29 7.8
gb|BJ318995.1|BJ318995 BJ318995 Y. Ogihara unpublished cDNA... 29 7.8
gb|CA644458.1|CA644458 wre1n.pk0083.d5 wre1n Triticum aesti... 29 7.8
gb|CA669690.1|CA669690 wlsu1.pk022.d8 wlsu1 Triticum aestiv... 29 7.8
gb|CA736617.1|CA736617 wpi1s.pk008.g16 wpi1s Triticum aesti... 29 7.8
gb|CA737060.1|CA737060 wpi1s.pk009.b9 wpi1s Triticum aestiv... 29 7.8
gb|CA742943.1|CA742943 wri1s.pk004.o20 wri1s Triticum aesti... 29 7.8
gb|CA743384.1|CA743384 wri1s.pk005.c7 wri1s Triticum aestiv... 29 7.8
gb|CA745112.1|CA745112 wri1s.pk008.c6 wri1s Triticum aestiv... 29 7.8
gb|CD882450.1|CD882450 F1.106M22F010330 F1 Triticum aestivu... 29 7.8
gb|CK153190.1|CK153190 FGAS031770 Triticum aestivum FGAS: T... 29 7.8
gb|CK163281.1|CK163281 FGAS015903 Triticum aestivum FGAS: L... 29 7.8
gb|CK168629.1|CK168629 FGAS043211 Triticum aestivum FGAS: T... 29 7.8
gb|CK168934.1|CK168934 FGAS043531 Triticum aestivum FGAS: T... 29 7.8
gb|CK203780.1|CK203780 FGAS012313 Triticum aestivum FGAS: L... 29 7.8
gb|CK213656.1|CK213656 FGAS025565 Triticum aestivum FGAS: L... 29 7.8
gb|CK216656.1|CK216656 FGAS028654 Triticum aestivum FGAS: L... 29 7.8
gb|CV760880.1|CV760880 FGAS055266 Triticum aestivum FGAS: L... 29 7.8
gb|DR731722.1|DR731722 FGAS077642 Triticum aestivum FGAS: T... 29 7.8
gb|CA736494.1|CA736494 wpi1s.pk007.f13 wpi1s Triticum aesti... 22 8.2
gb|AJ603002.1|AJ603002 AJ603002 T06 Triticum aestivum cDNA ... 23 8.3
gb|CA723833.1|CA723833 wds1f.pk002.e22 wds1f Triticum aesti... 26 8.9
gb|CA704220.1|CA704220 wdk1c.pk012.l8 wdk1c Triticum aestiv... 25 9.0
gb|CA676055.1|CA676055 wlsu2.pk019.g9 wlsu2 Triticum aestiv... 25 9.0
gb|CA743994.1|CA743994 wri1s.pk006.g13 wri1s Triticum aesti... 23 9.1
gb|BJ292594.1|BJ292594 BJ292594 Y. Ogihara unpublished cDNA... 24 9.4
gb|BJ299046.1|BJ299046 BJ299046 Y. Ogihara unpublished cDNA... 24 9.6
>gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1087
Score = 163 bits (350), Expect = 4e-040
Identities = 63/76 (82%), Positives = 72/76 (94%)
Frame = -2 / +1
Query: 243 GFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFF 64
GFN TLR GNV+HHEY+QVGKGRDVGLNQIS+FEAK+++GNGEQTLSRDIYRLGHR DFF
Sbjct: 100 GFNCTLRGGNVSHHEYIQVGKGRDVGLNQISMFEAKVSSGNGEQTLSRDIYRLGHRTDFF 279
Query: 63 RMLSCYYTTIGFYFST 16
RMLS +YTT+GFYF+T
Sbjct: 280 RMLSVFYTTVGFYFNT 327
Score = 83.5 bits (176), Expect = 4e-016
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1 / -2
Query: 22 EVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHVF 201
EVE++CC+ R+HP++I +MT VD+ Q LF IA YL K RYLI+ I ANL V
Sbjct: 321 EVESHCCIKHRKHPKKISSMTKSVDIPTQCLFTIATGYLSFKHRYLIKPNITPLANLDVL 142
Query: 202 MVSNIAFAQCGIES 243
MV+NI+ Q +E+
Sbjct: 141 MVANISTTQGAVET 100
Score = 73.5 bits (154), Expect = 4e-013
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2 / -3
Query: 104 LSVCSPLPFAIFASNRDI*LRPTSLPLPTCMYSW*VTLPSRNVELNP 244
L+VCSPLP ASN DI*L PTS PLPT MYSW +T P R V+L P
Sbjct: 239 LNVCSPLPLDTLASNIDI*LSPTSRPLPTWMYSWWLTFPPRRVQLKP 99
Score = 59.7 bits (124), Expect = 6e-009
Identities = 32/79 (40%), Positives = 43/79 (54%)
Frame = -1 / +3
Query: 244 RIQFHIARRQCYSP*IHASWQRKGCRSQSNISV*GKDSKWQWRTNAEP*HLPARSSL*FL 65
R Q H A +C P*+H WQ C + S+I V* +WQW T+ E +L S *F
Sbjct: 99 RFQLHPAWWKC*PP*VHPGWQGA*CWA*SDIDV*S*GIQWQW*TDIE*GYLQTWS*N*FF 278
Query: 64 QDAVLLLHNNWFLLQYLPG 8
DA +L+N+ LLQ+ G
Sbjct: 279 SDAFCVLYNSGILLQHNAG 335
Score = 57.4 bits (119), Expect = 3e-008
Identities = 34/75 (45%), Positives = 41/75 (54%)
Frame = -3 / +2
Query: 245 QDSIPHCAKAMLLTMNTCKLAKEGM*VSIKYLCLRQR*QMAMANKR*AVTSTG*VIALIS 66
Q S C ML TM+T +LA+ M I+Y CL+ R +AM N+ * ST VI LI
Sbjct: 98 QVSTAPCVVEMLATMSTSRLARGVMLGLIRYRCLKLRYPVAMVNRH*VGISTDLVIELIF 277
Query: 65 SGCCLVTTQQLVSTS 21
GC L QQ STS
Sbjct: 278 FGCFLCFIQQWDSTS 322
Score = 50.6 bits (104), Expect = 4e-006
Identities = 30/69 (43%), Positives = 33/69 (47%)
Frame = +3 / -1
Query: 9 PGRY*SRNQLLCSNKTAS*RNQSDDLAGRCHGSAFVRHCHLLSLPQTEIFD*DLHPFLCQ 188
P *SR LL + AS +NQ D R S V HCH + QT I D* H CQ
Sbjct: 334 PALC*SRIPLLYKTQKASEKNQFYDQVCRYPYSMSVHHCHWIP*LQTSISD*AQHHAPCQ 155
Query: 189 LACIHGE*H 215
C HG *H
Sbjct: 154 PGCTHGG*H 128
>gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4354_C05_F10, mRNA sequence
Length = 779
Score = 160 bits (344), Expect = 3e-039
Identities = 63/77 (81%), Positives = 69/77 (89%)
Frame = -2 / +1
Query: 246 AGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDF 67
AGFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDIYRLG FDF
Sbjct: 184 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDF 363
Query: 66 FRMLSCYYTTIGFYFST 16
FRMLS Y TT+GFYF T
Sbjct: 364 FRMLSFYVTTVGFYFCT 414
Score = 84.9 bits (179), Expect = 2e-016
Identities = 43/77 (55%), Positives = 46/77 (59%)
Frame = +2 / -1
Query: 17 VLK*KPIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRPTSLPLPTCM 196
V K* P VV *+D+IL L CSP P A F SN I*L PTSLPLPT +
Sbjct: 413 VQK*NPTVVT*KDNILKKSKSCPSLYISLLRTCSPFPPATFPSNSAI*LSPTSLPLPTWI 234
Query: 197 YSW*VTLPSRNVELNPA 247
YSW*V P R VELNPA
Sbjct: 233 YSW*VMFP*RRVELNPA 183
Score = 52.8 bits (109), Expect = 7e-007
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +1 / -3
Query: 19 TEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHV 198
TEV+ N + HPE+IK + V ++A+ LFA++ K LI+ I SF NL +
Sbjct: 411 TEVKPNSSHIEG*HPEKIKKLPKSVYISAKNLFAVSSRNFSFK*CDLIKPNISSFTNLDI 232
Query: 199 FMVSNIAFAQCGIESC 246
MVS + Q ++ C
Sbjct: 231 LMVSYVPLTQSRVKPC 184
Score = 50.6 bits (104), Expect = 4e-006
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = -1 / +3
Query: 247 CRIQFHIARRQCYSP*IHASWQRKGCRSQSNISV*GKDSKWQWRTNAEP*HLPARSSL*F 68
CR+ + A R+ SP*++ W RK C + S+ ++* K + RT++ ++ ++ *F
Sbjct: 183 CRV*LYSASREHNSP*VYPGW*RKRCWA*SDRTI*RKSCGRKRRTSS*QRYIQTWAAF*F 362
Query: 67 LQDAVLLLHNNWFLLQY 17
QD +LL W LL Y
Sbjct: 363 FQDVILLCDYCWVLLLY 413
Score = 29.9 bits (59), Expect = 5.7
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -3 / +2
Query: 227 CAKAMLLTMNTCKLAKEGM*VSIKYLCLRQR*QMAMANKR*AVTSTG*VIALISSGC 57
C K LTM+ +L KE M I+ L+++ + ANK A T LI SGC
Sbjct: 203 CVKGT*LTMSISRLVKEEMLGLIRSHYLKEKLREETANKFLAEIYTDLGSFLIFSGC 373
>gb|BQ902766.1|BQ902766 Ta03_01c07_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_01c07, mRNA
sequence
Length = 559
Score = 155 bits (334), Expect = 7e-038
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = -2 / -2
Query: 246 AGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDF 67
AGFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GN EQ LSRDIYRLG FDF
Sbjct: 228 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNAEQVLSRDIYRLGQLFDF 49
Query: 66 FRMLSCYYTTIGFYF 22
FRMLS Y TT+GFYF
Sbjct: 48 FRMLSFYVTTVGFYF 4
Score = 79.4 bits (167), Expect = 7e-015
Identities = 41/75 (54%), Positives = 44/75 (58%)
Frame = +2 / +2
Query: 23 K*KPIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRPTSLPLPTCMYS 202
K* P VV *+D+IL L CS P A F SN I*L PTSLPLPT +YS
Sbjct: 5 K*NPTVVT*KDNILKKSKSCPSLYISLLRTCSAFPPATFPSNSAI*LSPTSLPLPT*IYS 184
Query: 203 W*VTLPSRNVELNPA 247
W*V P R VELNPA
Sbjct: 185 W*VMFP*RRVELNPA 229
Score = 51.5 bits (106), Expect = 2e-006
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +1
Query: 19 TEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHV 198
TEV+ N + HPE++K + V ++A+ LF ++ K LI+ I SF NL++
Sbjct: 1 TEVKPNSSHIEG*HPEKVKKLPKSVYISAKNLFGVSSRNFSFK*CDLIKPNISSFTNLNI 180
Query: 199 FMVSNIAFAQCGIESC 246
MVS + Q ++ C
Sbjct: 181 LMVSYVPLTQSRVKPC 228
Score = 46.4 bits (95), Expect = 6e-005
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = -1 / -1
Query: 247 CRIQFHIARRQCYSP*IHASWQRKGCRSQSNISV*GKDSKWQWRTNAEP*HLPARSSL*F 68
CR+ + A R+ SP*+++ W RK C + S+ ++* K + RT++ ++ ++ *
Sbjct: 229 CRV*LYSASREHNSP*VYSGW*RKRCWA*SDRTI*RKSCGRKRRTSS*QRYIQTWAAF*L 50
Query: 67 LQDAVLLLHNNWFLL 23
QD +LL W LL
Sbjct: 49 FQDVILLCDYCWVLL 5
>gb|CA501219.1|CA501219 WHE4030_G09_M18ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4030_G09_M18, mRNA sequence
Length = 522
Score = 155 bits (334), Expect = 7e-038
Identities = 59/77 (76%), Positives = 69/77 (89%)
Frame = -2 / -1
Query: 246 AGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDF 67
AGFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRD+YRLG FDF
Sbjct: 330 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDF 151
Query: 66 FRMLSCYYTTIGFYFST 16
FRML+ +YTT+G+Y T
Sbjct: 150 FRMLTFFYTTVGYYVCT 100
Score = 75.8 bits (159), Expect = 9e-014
Identities = 38/72 (52%), Positives = 41/72 (56%)
Frame = +2 / +2
Query: 32 PIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRPTSLPLPTCMYSW*V 211
P VV* + SIL L CSPLP A F SNR I +PTS P PT +YSW V
Sbjct: 116 PTVV*KKVSILKKSNSCPKRYTSRLRTCSPLPPATFPSNRAIWFKPTSRPFPTWIYSWCV 295
Query: 212 TLPSRNVELNPA 247
LP R VELNPA
Sbjct: 296 ILPWRRVELNPA 331
Score = 54.2 bits (112), Expect = 3e-007
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1 / +1
Query: 22 EVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHVF 201
++ TN V HP+E+K + V V+ + L A+ L+Q L+ T I SF NL +F
Sbjct: 106 DIITNSGVEEG*HPKEVKQLPQTVHVSTKNLLAVTSSNFPLEQGNLV*TNITSFPNLDIF 285
Query: 202 MVSNIAFAQCGIES 243
MV +I AQ IES
Sbjct: 286 MVCDITLAQS*IES 327
Score = 33.6 bits (67), Expect = 0.45
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -3 / -2
Query: 242 DSIPHCAKAMLLTMNTCKLAKEGM*VSIKYLCLRQR*QMAMANKR*AVTSTG*VIALISS 63
DSI CA+ + TMN +L K+ M V + C R + A+K T T L S
Sbjct: 326 DSIQLCARVISHTMNISRLGKDVMLV*TRLPCSRGKLLEVTASKFLVETCTVWGSCLTSL 147
Query: 62 GCCLVTTQQLVSTS 21
GC +T LV S
Sbjct: 146 GC*PSSTPLLVIMS 105
Score = 24.9 bits (48), Expect(2) = 0.37
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 94 LPARSSL*FLQDAVLLLHNNWFL 26
+P +++* L DA LLLH+ W L
Sbjct: 178 VPFGAAV*LL*DANLLLHHCWLL 110
Score = 24.4 bits (47), Expect(2) = 0.37
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1 / -3
Query: 241 IQFHIARRQCYSP*IHASWQRKGCRSQSNISV*GK 137
IQF+ A ++P*I+ W+R C + + V G+
Sbjct: 325 IQFNSAPG*YHTP*IYPGWERT*CWFKPDCPVRGE 221
>gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 5', mRNA sequence
Length = 425
Score = 153 bits (328), Expect = 4e-037
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = -2 / +2
Query: 237 NSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRM 58
NSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDIYRLG FDFFRM
Sbjct: 23 NSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRM 202
Query: 57 LSCYYTTIGFYFST 16
LS Y TT+GFYF T
Sbjct: 203 LSFYVTTVGFYFCT 244
Score = 77.1 bits (162), Expect = 4e-014
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -3
Query: 17 VLK*KPIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRPTSLPLPTCM 196
V K* P VV *+D+IL L CSP P A F SN I*L PTSLPLPT +
Sbjct: 243 VQK*NPTVVT*KDNILKKSKSCPSLYISLLRTCSPFPPATFPSNSAI*LSPTSLPLPTWI 64
Query: 197 YSW*VTLPSRNVEL 238
YSW*V P R VEL
Sbjct: 63 YSW*VMFP*RRVEL 22
Score = 48.7 bits (100), Expect = 1e-005
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1 / -2
Query: 19 TEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHV 198
TEV+ N + HPE+IK + V ++A+ LFA++ K LI+ I SF NL +
Sbjct: 241 TEVKPNSSHIEG*HPEKIKKLPKSVYISAKNLFAVSSRNFSFK*CDLIKPNISSFTNLDI 62
Query: 199 FMVSNIAFAQ 228
MVS + Q
Sbjct: 61 LMVSYVPLTQ 32
Score = 29.9 bits (59), Expect = 5.7
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -3 / +3
Query: 227 CAKAMLLTMNTCKLAKEGM*VSIKYLCLRQR*QMAMANKR*AVTSTG*VIALISSGC 57
C K LTM+ +L KE M I+ L+++ + ANK A T LI SGC
Sbjct: 33 CVKGT*LTMSISRLVKEEMLGLIRSHYLKEKLREETANKFLAEIYTDLGSFLIFSGC 203
>gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum cDNA clone TaE15017C07R, mRNA
sequence
Length = 653
Score = 135 bits (290), Expect = 8e-032
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -2 / +2
Query: 213 VTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTI 34
+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDIYRLG FDFFRMLS Y TT+
Sbjct: 2 ITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYVTTV 181
Query: 33 GFYFST 16
GFYF T
Sbjct: 182 GFYFCT 199
Score = 68.0 bits (142), Expect = 2e-011
Identities = 35/65 (53%), Positives = 38/65 (58%)
Frame = +2 / -3
Query: 17 VLK*KPIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRPTSLPLPTCM 196
V K* P VV *+D+IL L CSP P A F SN I*L PTSLPLPT +
Sbjct: 198 VQK*NPTVVT*KDNILKKSKSCPSLYISLLRTCSPFPPATFPSNSAI*LSPTSLPLPTWI 19
Query: 197 YSW*V 211
YSW*V
Sbjct: 18 YSW*V 4
Score = 46.4 bits (95), Expect = 6e-005
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1 / -2
Query: 19 TEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANLHV 198
TEV+ N + HPE+IK + V ++A+ LFA++ K LI+ I SF NL +
Sbjct: 196 TEVKPNSSHIEG*HPEKIKKLPKSVYISAKNLFAVSSRNFSFK*CDLIKPNISSFTNLDI 17
Query: 199 FMVS 210
MVS
Sbjct: 16 LMVS 5
>gb|CA682267.1|CA682267 wlm24.pk0031.b12 wlm24 Triticum aestivum cDNA clone
wlm24.pk0031.b12 5' end, mRNA sequence
Length = 638
Score = 122 bits (260), Expect = 1e-027
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -2 / +2
Query: 189 VGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
VGKGRDVGLNQIS+FEAK+A GNGEQTLSRD+YRLGH DFFRMLS +YTTIGFY +T
Sbjct: 2 VGKGRDVGLNQISMFEAKVAGGNGEQTLSRDVYRLGHGLDFFRMLSFFYTTIGFYLNT 175
Score = 55.6 bits (115), Expect = 1e-007
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +1 / -2
Query: 16 GTEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFAN 189
G E+++N C+ +HPEEI+++ * VD++A L +A L K LIE +PSF N
Sbjct: 175 GVEIKSNGCIKE*EHPEEIQSVA*SVDISA*SLLPVATSNLGFKHGNLIEPNVPSFTN 2
Score = 50.6 bits (104), Expect = 4e-006
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = -1 / +1
Query: 187 WQRKGCRSQSNISV*GKDSKWQWRTNAEP*HLPARSSL*FLQDAVLLLHNNWFLLQYLPG 8
W RKG +QS+ V* + WQ N++ L R + FL DA++LL+N+W L Q+ G
Sbjct: 4 W*RKGRWAQSDFHV*SQGCWWQRGANSKQRCLQTRPRIGFLPDALILLYNHWILSQHHDG 183
Score = 50.1 bits (103), Expect = 5e-006
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2 / -3
Query: 104 LSVCSPLPFAIFASNRDI*LRPTSLPLPT 190
L VCSPLP A ASN +I*L PTSLPLPT
Sbjct: 87 LRVCSPLPPATLASNMEI*LSPTSLPLPT 1
Score = 39.6 bits (80), Expect = 0.007
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = -3 / +3
Query: 188 LAKEGM*VSIKYLCLRQR*QMAMANKR*AVTSTG*VIALISSGCCLVTTQQLVSTSVP 15
L KEG SI++ CL+ R +A +K *A ST * ISSGC Q L S P
Sbjct: 3 LVKEGTLGSIRFPCLKPRLLVATGSKL*AEMSTD*ATDWISSGCSHSFIQPLDFISTP 176
>gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan synthase 8 (GSL8) mRNA,
partial cds
Length = 580
Score = 100 bits (212), Expect = 4e-021
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -2 / +3
Query: 168 GLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
GLNQI+LFE K+A GNGEQ LSRDIYRLG FDFFRMLS Y TT+GFYF T
Sbjct: 3 GLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYVTTVGFYFCT 155
Score = 39.6 bits (80), Expect = 0.007
Identities = 23/51 (45%), Positives = 25/51 (49%)
Frame = +2 / -1
Query: 17 VLK*KPIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI*LRP 169
V K* P VV *+D+IL L CSP P A F SN I*L P
Sbjct: 154 VQK*NPTVVT*KDNILKKSKSCPSLYISLLRTCSPFPPATFPSNSAI*LSP 2
Score = 32.2 bits (64), Expect = 1.2
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1 / -3
Query: 19 TEVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIA 126
TEV+ N + HPE+IK + V ++A+ LFA++
Sbjct: 152 TEVKPNSSHIEG*HPEKIKKLPKSVYISAKNLFAVS 45
>gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13j08 5', mRNA sequence
Length = 605
Score = 98.7 bits (209), Expect = 1e-020
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = -2 / +2
Query: 153 SLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
S+FEAK+++GNGEQTLSRDIYRLGHR DFFRMLS +YTT+GFYF+T
Sbjct: 2 SMFEAKVSSGNGEQTLSRDIYRLGHRTDFFRMLSVFYTTVGFYFNT 139
Score = 55.1 bits (114), Expect = 1e-007
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1 / -2
Query: 22 EVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQR 153
EVE++CC+ R+HP++I +MT VD+ Q LF IA YL K R
Sbjct: 133 EVESHCCIKHRKHPKKISSMTKSVDIPTQCLFTIATGYLSFKHR 2
Score = 36.8 bits (74), Expect = 0.049
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = -3 / +3
Query: 149 CLRQR*QMAMANKR*AVTSTG*VIALISSGCCLVTTQQLVSTS 21
CL+ R +AM N+ * ST VI LI GC L QQ STS
Sbjct: 6 CLKLRYPVAMVNRH*VGISTDLVIELIFFGCFLCFIQQWDSTS 134
Score = 35.4 bits (71), Expect = 0.13
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1 / +1
Query: 154 ISV*GKDSKWQWRTNAEP*HLPARSSL*FLQDAVLLLHNNWFLLQYLPG 8
I V* +WQW T+ E +L S *F DA +L+N+ LLQ+ G
Sbjct: 1 IDV*S*GIQWQW*TDIE*GYLQTWS*N*FFSDAFCVLYNSGILLQHNAG 147
Score = 29.5 bits (58), Expect = 7.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3 / -1
Query: 9 PGRY*SRNQLLCSNKTAS*RNQSDDLAGRCHGSAFVRHCHLLSLPQT 149
P *SR LL + AS +NQ D R S V HCH + QT
Sbjct: 146 PALC*SRIPLLYKTQKASEKNQFYDQVCRYPYSMSVHHCHWIP*LQT 6
Score = 27.6 bits (54), Expect(2) = 3.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 104 LSVCSPLPFAIFASNRD 154
L+VCSPLP ASN D
Sbjct: 51 LNVCSPLPLDTLASNID 1
Score = 18.5 bits (34), Expect(2) = 3.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -3
Query: 17 VLK*KPIVV**QDSI 61
VLK* P VV* +SI
Sbjct: 138 VLK*NPTVV*NTESI 94
>gb|CL902576.1|CL902576 CSHC1951 1639HC library Triticum aestivum genomic clone
1639HC10K18, DNA sequence
Length = 728
Score = 92.7 bits (196), Expect = 7e-019
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -2 / -1
Query: 165 LNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
LNQI+LFE K+A GNGEQ LSRD+YRLG FDFFRML+ +YTT+G+Y T
Sbjct: 560 LNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLTFFYTTVGYYVCT 411
Score = 32.7 bits (65), Expect = 0.85
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = +2 / +1
Query: 32 PIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI 157
P VV* + SIL L CSPLP A F SNR I
Sbjct: 427 PTVV*KKVSILKKSNSCPKRYTSRLRTCSPLPPATFPSNRAI 552
Score = 31.3 bits (62), Expect = 2.2
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1 / +3
Query: 22 EVETNCCVVTRQHPEEIKAMT*PVDVTAQRLFAIAICYLCLKQRYLIETYIPSFANL 192
++ TN V HP+E+K + V V+ Q L A+ LKQ L+ T F L
Sbjct: 417 DIITNSGVKEG*HPKEVKQLPQAVHVSTQNLLAVTSGNFPLKQGNLV*TTSRPFPTL 587
Score = 29.9 bits (59), Expect(2) = 0.28
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1 / -3
Query: 148 V*GKDSKWQWRTNAEP*HLPARSSL*FLQDAVLLLHNNWFL 26
V*G+ + R ++E +P +++* L DA LLLH+ W L
Sbjct: 543 V*GESCRR*RRASSESRRVPLGAAV*LL*DANLLLHHCWLL 421
Score = 20.3 bits (38), Expect(2) = 0.28
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 192 QVGKGRDVGLNQISLFEAKI 133
+VGKGRDV ++ K+
Sbjct: 586 RVGKGRDVV*TRLPCLRGKL 527
>gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 5', mRNA sequence
Length = 628
Score = 85.8 bits (181), Expect = 8e-017
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -2 / +1
Query: 156 ISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
I+LFE K+A GNGEQ LSRD+YRLG FDFFRML+ +YTT+G+Y T
Sbjct: 31 IALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLTFFYTTVGYYVCT 171
Score = 32.7 bits (65), Expect = 0.85
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = +2 / -3
Query: 32 PIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNRDI 157
P VV* + SIL L CSPLP A F SNR I
Sbjct: 155 PTVV*KKVSILKKSNSCPKRYTSRLRTCSPLPPATFPSNRAI 30
Score = 29.9 bits (59), Expect = 5.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1 / +3
Query: 148 V*GKDSKWQWRTNAEP*HLPARSSL*FLQDAVLLLHNNWFL 26
V*G+ + R ++E +P +++* L DA LLLH+ W L
Sbjct: 39 V*GESCRR*RRASSESRRVPLGAAV*LL*DANLLLHHCWLL 161
>gb|BE500826.1|BE500826 WHE0991-0994_B23_B23ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_B23_B23, mRNA
sequence
Length = 364
Score = 83.5 bits (176), Expect = 4e-016
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -2 / +3
Query: 150 LFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
LFE K+A GNGEQ LSRD+YRLG FDFFRML+ +YTT+G+Y T
Sbjct: 3 LFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLTFFYTTVGYYVCT 137
Score = 31.8 bits (63), Expect = 1.6
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +2 / -1
Query: 32 PIVV**QDSILXXXXXXXXXXXXXLSVCSPLPFAIFASNR 151
P VV* + SIL L CSPLP A F SNR
Sbjct: 121 PTVV*KKVSILKKSNSCPKRYTSRLRTCSPLPPATFPSNR 2
Score = 29.9 bits (59), Expect = 5.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1 / +2
Query: 148 V*GKDSKWQWRTNAEP*HLPARSSL*FLQDAVLLLHNNWFL 26
V*G+ + R ++E +P +++* L DA LLLH+ W L
Sbjct: 5 V*GESCRR*RRASSESRRVPLGAAV*LL*DANLLLHHCWLL 127
>gb|CD925510.1|CD925510 G750.117H07F010711 G750 Triticum aestivum cDNA clone G750117H07,
mRNA sequence
Length = 575
Score = 76.7 bits (161), Expect = 5e-014
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 138 KIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFST 16
K+A GNGEQ LSRD+YRLG FDFFRML+ +YTT+G+Y T
Sbjct: 16 KVAGGNGEQVLSRDVYRLGQLFDFFRMLTFFYTTVGYYVCT 138
>gb|CA497978.1|CA497978 WHE3236_G04_N08ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3236_G04_N08, mRNA sequence
Length = 633
Score = 46.9 bits (96), Expect = 4e-005
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -2 / +3
Query: 246 AGFNSTLREGNVTHHEYMQ 190
AGFNSTLR+GN+THHEY+Q
Sbjct: 573 AGFNSTLRQGNITHHEYIQ 629
Score = 32.7 bits (65), Expect = 0.85
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / -3
Query: 194 MYSW*VTLPSRNVELNPA 247
+YSW*V P R VELNPA
Sbjct: 625 IYSW*VMFP*RRVELNPA 572
>gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan synthase 22 (GSL22)
mRNA, partial cds
Length = 433
Score = 43.7 bits (89), Expect = 4e-004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2 / +1
Query: 72 DFFRMLSCYYTTIGFYFST 16
DFFRMLS +YTTIGFYF+T
Sbjct: 1 DFFRMLSFFYTTIGFYFNT 57
Score = 31.3 bits (62), Expect = 2.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 22 EVETNCCVVTRQHPEEI 72
E+E+N C+ R+HPEEI
Sbjct: 51 EIESNGCIKKREHPEEI 1
>gb|CA738110.1|CA738110 wpi2s.pk002.n24 wpi2s Triticum aestivum cDNA clone
wpi2s.pk002.n24 5' end, mRNA sequence
Length = 183
Score = 28.6 bits (56), Expect(2) = 0.12
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 39 TIGFYFSTCPGGR 1
T+ F+F TCPGGR
Sbjct: 39 TLFFFFCTCPGGR 1
Score = 20.8 bits (39), Expect(2) = 0.12
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 192 QVGKGRDVGLN 160
+VG+G D G+N
Sbjct: 167 EVGRGTDTGIN 135
>gb|CA736855.1|CA736855 wpi1s.pk009.e5 wpi1s Triticum aestivum cDNA clone wpi1s.pk009.e5
5' end, mRNA sequence
Length = 261
Score = 28.1 bits (55), Expect(2) = 0.60
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 34 WFLLQYLPGRP 2
WF L YLPGRP
Sbjct: 34 WFFLLYLPGRP 2
Score = 19.4 bits (36), Expect(2) = 0.60
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 74 LISSGCCLVTTQQLVS 27
++SSGC +T LVS
Sbjct: 153 VLSSGC*QSSTSSLVS 106
>gb|AJ603109.1|AJ603109 AJ603109 T06 Triticum aestivum cDNA clone F08_T06_plate_59, mRNA
sequence
Length = 416
Score = 24.9 bits (48), Expect(2) = 0.73
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2 / -2
Query: 93 YRLGHRFDFFRMLSCYYTTIGFYF 22
Y LG +L CYY T+G +F
Sbjct: 274 YGLGSSC*GRNLLPCYYQTLGSFF 203
Score = 23.1 bits (44), Expect(2) = 0.73
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 28 LLQYLPGRP 2
+L+YLPGRP
Sbjct: 32 ILEYLPGRP 6
>gb|CA726412.1|CA726412 wet1s.pk003.f15 wet1s Triticum aestivum cDNA clone wet1s.pk003.f15
5' end, mRNA sequence
Length = 626
Score = 22.1 bits (42), Expect(3) = 0.76
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1 / -3
Query: 130 KWQWRTNAEP*HLPARS 80
+W+WR P P RS
Sbjct: 174 RWRWRRRRGPCRRPPRS 124
Score = 21.7 bits (41), Expect(3) = 0.76
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 24 FSTCPGGR 1
F TCPGGR
Sbjct: 28 FWTCPGGR 5
Score = 18.5 bits (34), Expect(3) = 0.76
Identities = 6/20 (30%), Positives = 10/20 (50%)
Frame = -1 / -3
Query: 175 GCRSQSNISV*GKDSKWQWR 116
GCR + + + W+WR
Sbjct: 225 GCRRSPSWAGRRRRRAWRWR 166
>gb|CA673922.1|CA673922 wlsu2.pk020.n19 wlsu2 Triticum aestivum cDNA clone
wlsu2.pk020.n19 5' end, mRNA sequence
Length = 163
Score = 32.2 bits (64), Expect = 1.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF S ++ F+F TCPGGR
Sbjct: 95 FFFFFFFSFFFFFFFFFFFTCPGGR 21
>gb|CA746685.1|CA746685 wri2s.pk004.h11 wri2s Triticum aestivum cDNA clone wri2s.pk004.h11
5' end, mRNA sequence
Length = 262
Score = 32.2 bits (64), Expect = 1.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 66 FRMLSCYYTTIGFYFSTCPGGR 1
F ++ CY + ++ STCPGGR
Sbjct: 197 FSLVLCYTLMVCYHVSTCPGGR 262
>gb|CA746714.1|CA746714 wri2s.pk004.h23 wri2s Triticum aestivum cDNA clone wri2s.pk004.h23
5' end, mRNA sequence
Length = 266
Score = 32.2 bits (64), Expect = 1.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 66 FRMLSCYYTTIGFYFSTCPGGR 1
F ++ CY + ++ STCPGGR
Sbjct: 197 FSLVLCYTLMVCYHVSTCPGGR 262
>gb|DR732487.1|DR732487 FGAS078407 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 874
Score = 21.2 bits (40), Expect(3) = 1.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2 / -2
Query: 246 AGFNSTLREGNVTHHEYMQVGKG 178
A FN+ L+ ++ H +GKG
Sbjct: 825 AEFNAPLQGKSIRHSGCANIGKG 757
Score = 20.8 bits (39), Expect(3) = 1.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -2
Query: 196 HASWQRKGC 170
+ASWQ GC
Sbjct: 732 YASWQNGGC 706
Score = 20.3 bits (38), Expect(3) = 1.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -1
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 151 TCPGGR 134
>gb|CA672060.1|CA672060 wlsu2.pk015.l7 wlsu2 Triticum aestivum cDNA clone wlsu2.pk015.l7
5' end, mRNA sequence
Length = 486
Score = 24.9 bits (48), Expect(2) = 1.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 24 FSTCPGGR 1
FSTCPGGR
Sbjct: 47 FSTCPGGR 24
Score = 22.1 bits (42), Expect(2) = 1.5
Identities = 9/33 (27%), Positives = 12/33 (36%)
Frame = -1 / -3
Query: 199 IHASWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
+ A W G S ++ GK W W P
Sbjct: 367 VRAPWFPHGKGSXDFLTQRGKKEPWIWSCEVSP 269
>gb|DR732296.1|DR732296 FGAS078216 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 920
Score = 27.6 bits (54), Expect(2) = 1.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2 / -3
Query: 204 HEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRF 73
H+ G GRD L++ F ++ NGN + G+RF
Sbjct: 918 HQLKGKG*GRDKSLDRAGGFSEEVNNGNSAVNEKVETVTKGYRF 787
Score = 20.3 bits (38), Expect(2) = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -1
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 149 TCPGGR 132
>gb|BE414309.1|BE414309 SCU008.C10.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU008.C10, mRNA sequence
Length = 705
Score = 31.8 bits (63), Expect = 1.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1 / -3
Query: 223 RRQCYSP*IHASWQRKGCRSQSNISV*GKDSKWQWRTNA 107
RR C P W+R+GCR++ + +W W A
Sbjct: 358 RRGCRRPWA*RRWRRRGCRARRT*RTRPRRGRWPWWARA 242
>gb|BQ606886.1|BQ606886 BRY_2762 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 552
Score = 31.8 bits (63), Expect = 1.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1 / -2
Query: 223 RRQCYSP*IHASWQRKGCRSQSNISV*GKDSKWQWRTNA 107
RR C P W+R+GCR++ + +W W A
Sbjct: 206 RRGCRRPWA*RRWRRRGCRARRT*RTRPRRGRWPWWARA 90
>gb|CA736007.1|CA736007 wpi1s.pk006.c19 wpi1s Triticum aestivum cDNA clone
wpi1s.pk006.c19 5' end, mRNA sequence
Length = 213
Score = 31.8 bits (63), Expect = 1.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 51 CYYTTIGFYFSTCPGGR 1
C+ T+G Y STCPGGR
Sbjct: 55 CHCFTLG*YSSTCPGGR 5
>gb|CA745351.1|CA745351 wri2s.pk001.e9 wri2s Triticum aestivum cDNA clone wri2s.pk001.e9 5'
end, mRNA sequence
Length = 243
Score = 31.8 bits (63), Expect = 1.6
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 52 LLLHNNWFLLQYLPGRP 2
LLLH +FLL YLPGRP
Sbjct: 188 LLLHVFFFLLGYLPGRP 238
>gb|CK200634.1|CK200634 FGAS009150 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 774
Score = 31.3 bits (62), Expect = 2.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 193 ASWQRKGCRSQSNISV*GKDSKWQWRTNAEP*HLPARSS 77
A W R G S+ G+ +W W + P H+ AR++
Sbjct: 61 AGWYRSGIPGISSTHASGRR*RWHWVQSRRPEHIGARTA 177
>gb|CA739747.1|CA739747 wpi2s.pk010.g10 wpi2s Triticum aestivum cDNA clone
wpi2s.pk010.g10 5' end, mRNA sequence
Length = 183
Score = 24.0 bits (46), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 27 YFSTCPGGR 1
+F TCPGGR
Sbjct: 31 FFCTCPGGR 5
Score = 20.8 bits (39), Expect(2) = 2.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 192 QVGKGRDVGLN 160
+VG+G D G+N
Sbjct: 167 EVGRGTDTGIN 135
>gb|CA736572.1|CA736572 wpi1s.pk007.b4 wpi1s Triticum aestivum cDNA clone wpi1s.pk007.b4
5' end, mRNA sequence
Length = 617
Score = 26.3 bits (51), Expect(2) = 2.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 30 FYFSTCPGGR 1
FY TCPGGR
Sbjct: 30 FYIKTCPGGR 1
Score = 20.3 bits (38), Expect(2) = 2.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1 / -1
Query: 208 SP*IHASWQRKGCRSQSNI 152
S *IHASW G S ++
Sbjct: 143 SA*IHASWSVVGSDSPMSL 87
>gb|CA744368.1|CA744368 wri1s.pk007.j15 wri1s Triticum aestivum cDNA clone
wri1s.pk007.j15 5' end, mRNA sequence
Length = 600
Score = 30.9 bits (61), Expect = 3.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 60 MLSCYYTTIGFYFSTCPGGR 1
+L CY + Y+ TCPGGR
Sbjct: 64 VLQCYSHIVWQYYCTCPGGR 5
>gb|CA744469.1|CA744469 wri1s.pk007.j16 wri1s Triticum aestivum cDNA clone
wri1s.pk007.j16 5' end, mRNA sequence
Length = 600
Score = 30.9 bits (61), Expect = 3.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 60 MLSCYYTTIGFYFSTCPGGR 1
+L CY + Y+ TCPGGR
Sbjct: 64 VLQCYSHIVWQYYCTCPGGR 5
>gb|CK157762.1|CK157762 FGAS038924 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 902
Score = 30.9 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2 / +2
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF + ++ +G Y TCPGGR
Sbjct: 194 FFFFFVFFFFFWALGLYRYTCPGGR 268
>gb|CV522512.1|CV522512 RP-182 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 343
Score = 30.9 bits (61), Expect = 3.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 81 HRFDFFRMLSCYYTTIGFYFSTCPGGR 1
H F+ + C I F F TCPGGR
Sbjct: 211 HFFNTLFFVRCNSQVISFGFCTCPGGR 131
>gb|AY772733.1| Triticum aestivum clone BAC TA1426L2, *** SEQUENCING IN PROGRESS ***, 21
unordered pieces
Length = 125527
Score = 30.9 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2 / -2
Query: 107 SVCSPLPFAIFASNRDI*LRPTSLPLPTCMYSW 205
+ C+P PF S+ LR TS+ LP C+ W
Sbjct: 103350 TTCTPFPFHSCKSSSTNGLRYTSMLLPGCLGPW 103252
>gb|CA735636.1|CA735636 wpi1s.pk004.c17 wpi1s Triticum aestivum cDNA clone
wpi1s.pk004.c17 5' end, mRNA sequence
Length = 604
Score = 25.8 bits (50), Expect(2) = 3.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 68 SSGCCLVTTQQLVSTSVPARAA 3
SS C VT + L T+VPARAA
Sbjct: 68 SSLCKKVTNRLLRRTNVPARAA 3
Score = 20.3 bits (38), Expect(2) = 3.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -2
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 18 TCPGGR 1
>gb|DR732642.1|DR732642 FGAS078562 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 855
Score = 28.1 bits (55), Expect(2) = 3.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3 / -3
Query: 72 QSDDLAGRCHGSAFVRHCHLLS 137
QS + G CH A + CHL S
Sbjct: 763 QSPQMQGXCHSLALMNTCHLRS 698
Score = 18.5 bits (34), Expect(2) = 3.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / -2
Query: 2 RPPGQV 19
RPPGQV
Sbjct: 791 RPPGQV 774
>gb|CK152865.1|CK152865 FGAS035941 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 874
Score = 26.3 bits (51), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 90 GRCHGSAFVRHC 125
GRCHGS HC
Sbjct: 508 GRCHGSCTCAHC 543
Score = 20.3 bits (38), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / +2
Query: 2 RPPGQVLK 25
RPPGQV K
Sbjct: 128 RPPGQVTK 151
>gb|CA742428.1|CA742428 wri1s.pk001.m17 wri1s Triticum aestivum cDNA clone
wri1s.pk001.m17 5' end, mRNA sequence
Length = 264
Score = 22.6 bits (43), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 25 LQYLPGRP 2
+QYLPGRP
Sbjct: 29 IQYLPGRP 6
Score = 22.1 bits (42), Expect(2) = 3.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2 / -2
Query: 237 NSTLREGNVTHHEYMQVGKGR 175
+S L N+T H VG+GR
Sbjct: 179 SSPLENVNITVHRKRGVGRGR 117
>gb|CK160102.1|CK160102 FGAS041649 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 901
Score = 28.1 bits (55), Expect(2) = 3.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3 / +1
Query: 75 SDDLAGRCHGSAFVRHCHLLSL 140
S L CH + V HCH LSL
Sbjct: 673 SHRLIVNCHTESAVEHCHALSL 738
Score = 18.5 bits (34), Expect(2) = 3.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / +3
Query: 2 RPPGQV 19
RPPGQV
Sbjct: 132 RPPGQV 149
>gb|BE442857.1|BE442857 WHE1107_E06_J11ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1107_E06_J11,
mRNA sequence
Length = 294
Score = 30.4 bits (60), Expect = 4.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2 / +2
Query: 138 KIANGNGEQTLSRDIYRLGHRFDFFRMLSC 49
+I G G+Q LS G RFD R LSC
Sbjct: 5 EILRGRGQQALSMVASERGLRFDTHRCLSC 94
>gb|CA672698.1|CA672698 wlsu2.pk018.d9 wlsu2 Triticum aestivum cDNA clone wlsu2.pk018.d9
5' end, mRNA sequence
Length = 155
Score = 30.4 bits (60), Expect = 4.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -1
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 95 FFFFFFFFFFFFFFFFFFXTCPGGR 21
>gb|CA738224.1|CA738224 wpi2s.pk006.m15 wpi2s Triticum aestivum cDNA clone
wpi2s.pk006.m15 5' end, mRNA sequence
Length = 504
Score = 30.4 bits (60), Expect = 4.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1 / +1
Query: 1 AAARAGTEVETNCCVVTRQHPEE 69
AAARAGT CV+ QH EE
Sbjct: 1 AAARAGTLPNDGTCVICDQHKEE 69
>gb|CA739876.1|CA739876 wpi2s.pk010.f7 wpi2s Triticum aestivum cDNA clone wpi2s.pk010.f7
5' end, mRNA sequence
Length = 495
Score = 30.4 bits (60), Expect = 4.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1 / +1
Query: 1 AAARAGTEVETNCCVVTRQHPEE 69
AAARAGT CV+ QH EE
Sbjct: 1 AAARAGTLPNDGTCVICDQHKEE 69
>gb|CA743059.1|CA743059 wri1s.pk002.g9 wri1s Triticum aestivum cDNA clone wri1s.pk002.g9
5' end, mRNA sequence
Length = 616
Score = 30.4 bits (60), Expect = 4.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3 / +3
Query: 3 GRPGRY*SRNQLLCSNKTAS*RNQS 77
GRPGRY + +LCSN+ +S N S
Sbjct: 3 GRPGRYIFQ*VMLCSNQASSQGNSS 77
>gb|CA743106.1|CA743106 wri1s.pk002.j20 wri1s Triticum aestivum cDNA clone
wri1s.pk002.j20 5' end, mRNA sequence
Length = 188
Score = 30.4 bits (60), Expect = 4.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 40 NNWFLLQYLPGRP 2
N WF+ YLPGRP
Sbjct: 44 NRWFMCMYLPGRP 6
>gb|AJ602703.1|AJ602703 AJ602703 T06 Triticum aestivum cDNA clone G03_T06_plate_21, mRNA
sequence
Length = 532
Score = 30.4 bits (60), Expect = 4.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1 / -1
Query: 67 LQDAVLLLHNNWFLLQYLPGRP 2
L DA ++H LLQYLPGRP
Sbjct: 76 LLDASCVVHLITMLLQYLPGRP 11
>emb|AX660680.1| Sequence 1037 from Patent WO03000906
Length = 588
Score = 30.4 bits (60), Expect = 4.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 175 GCRSQSNISV*GKDSKWQWRT 113
GCRSQ N + G + K++W+T
Sbjct: 147 GCRSQQNFPLAGPEVKFKWQT 85
>gb|AJ603012.1|AJ603012 AJ603012 T06 Triticum aestivum cDNA clone A07_T06_plate_47, mRNA
sequence
Length = 146
Score = 22.6 bits (43), Expect(2) = 4.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 30 FYFSTCPGGR 1
F STCPGGR
Sbjct: 39 FSGSTCPGGR 10
Score = 20.8 bits (39), Expect(2) = 4.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -1 / -1
Query: 142 GKDSKWQWR 116
G D +W WR
Sbjct: 146 GADRRWSWR 120
>gb|AJ612063.1|AJ612063 AJ612063 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06087R, mRNA
sequence
Length = 605
Score = 23.1 bits (44), Expect(2) = 4.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1 / +1
Query: 223 RRQCYSP*IHASWQRKGCRSQSNISV 146
RR+C + A+W G R +S +S+
Sbjct: 73 RRRCLLDLLAAAWSHPGRRLESPLSL 150
Score = 22.6 bits (43), Expect(2) = 4.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / +3
Query: 97 HLPARSSL*FLQDAVLLLH 41
H+P SSL FL+D + H
Sbjct: 522 HVPLVSSLHFLRDGXIYSH 578
>gb|CK156462.1|CK156462 FGAS037456 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 868
Score = 25.8 bits (50), Expect(2) = 4.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2 / -2
Query: 243 GFNSTLREGNVTHHEYMQVGKG 178
GFN +R G++ H + GKG
Sbjct: 699 GFNGPVRGGSICHLGWANFGKG 634
Score = 20.3 bits (38), Expect(2) = 4.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -2
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 120 TCPGGR 103
>gb|CK159238.1|CK159238 FGAS040648 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 886
Score = 25.8 bits (50), Expect(2) = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 97 HLPARSSL*FLQDAVLLLHNNWFLL 23
H RS LQ ++LLH W LL
Sbjct: 623 HFQRRSRFVRLQMMLMLLHRRWMLL 549
Score = 20.3 bits (38), Expect(2) = 4.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -3
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 146 TCPGGR 129
>gb|CA736813.1|CA736813 wpi1s.pk008.h16 wpi1s Triticum aestivum cDNA clone wpi1s.pk008.h16
5' end, mRNA sequence
Length = 349
Score = 22.6 bits (43), Expect(2) = 4.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3 / +1
Query: 239 SIPHCAKAMLLTMNTCKLAKEGM 171
S P C+ + +N+CK GM
Sbjct: 121 SSPTCSSHFVSVLNSCKQFMSGM 189
Score = 22.1 bits (42), Expect(2) = 4.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 21 STCPGGR 1
STCPGGR
Sbjct: 325 STCPGGR 345
>gb|CA744654.1|CA744654 wri1s.pk008.h14 wri1s Triticum aestivum cDNA clone
wri1s.pk008.h14 5' end, mRNA sequence
Length = 206
Score = 23.5 bits (45), Expect(2) = 5.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 62 GCCLVTTQQLVSTSVPARAA 3
G L+T +L+ +VPARAA
Sbjct: 67 GLLLMTIARLLLAAVPARAA 8
Score = 20.3 bits (38), Expect(2) = 5.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -1
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 23 TCPGGR 6
>gb|BE401194.1|BE401194 CNW01PL0096 ITEC CNW Wheat Powdery Mildew Resistant Library
Triticum aestivum cDNA clone CNW01PL0096, mRNA sequence
Length = 300
Score = 29.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 199 IHASWQRKGCRSQSNISV*GKDSKWQW 119
I SWQ GC ++S S G+ W W
Sbjct: 126 ITCSWQMAGCSARS*SSRRGRSGPWPW 46
>gb|CA643165.1|CA643165 wre1n.pk0071.f5 wre1n Triticum aestivum cDNA clone wre1n.pk0071.f5
5' end, mRNA sequence
Length = 318
Score = 29.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 199 IHASWQRKGCRSQSNISV*GKDSKWQW 119
I SWQ GC ++S S G+ W W
Sbjct: 96 ITCSWQMAGCSARS*SSRRGRSGPWPW 16
>gb|AL811189.1|AL811189 AL811189 d:37 Triticum aestivum cDNA clone B11_d37_plate_2, mRNA
sequence
Length = 390
Score = 29.9 bits (59), Expect = 5.7
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3 / +2
Query: 84 LAGRCHGSAFVRHCHLLSLPQTEIFD*DLHPFLCQLACIHGE*HCLRAM 230
L G+C G HC P E +P L AC * CL+ +
Sbjct: 125 LIGQCKGDQCTEHCEHEGYPYAECDTDHQYPELSYCACFFPC*FCLKLL 271
>gb|CA670007.1|CA670007 wlsu1.pk024.g14 wlsu1 Triticum aestivum cDNA clone
wlsu1.pk024.g14 5' end, mRNA sequence
Length = 327
Score = 25.8 bits (50), Expect(2) = 6.2
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 27 YFSTCPGGR 1
+FSTCPGGR
Sbjct: 31 HFSTCPGGR 5
Score = 18.5 bits (34), Expect(2) = 6.2
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -2 / -1
Query: 84 GHRFDFFRMLSCY 46
G F FF+ CY
Sbjct: 312 GRGFFFFQNFGCY 274
>gb|AJ602914.1|AJ602914 AJ602914 T06 Triticum aestivum cDNA clone E11_T06_plate_39, mRNA
sequence
Length = 247
Score = 22.1 bits (42), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 21 STCPGGR 1
STCPGGR
Sbjct: 25 STCPGGR 5
Score = 21.7 bits (41), Expect(2) = 6.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 74 LISSGCCLVTTQQL 33
++ S CCLVT + L
Sbjct: 59 IVDSPCCLVTGEYL 18
>gb|AJ603059.1|AJ603059 AJ603059 T06 Triticum aestivum cDNA clone E03_T06_plate_57, mRNA
sequence
Length = 248
Score = 22.1 bits (42), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 21 STCPGGR 1
STCPGGR
Sbjct: 25 STCPGGR 5
Score = 21.7 bits (41), Expect(2) = 6.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 74 LISSGCCLVTTQQL 33
++ S CCLVT + L
Sbjct: 59 IVDSPCCLVTGEYL 18
>gb|AJ603173.1|AJ603173 AJ603173 T06 Triticum aestivum cDNA clone F04_T06_plate_5, mRNA
sequence
Length = 250
Score = 22.1 bits (42), Expect(2) = 6.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 21 STCPGGR 1
STCPGGR
Sbjct: 27 STCPGGR 7
Score = 21.7 bits (41), Expect(2) = 6.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 74 LISSGCCLVTTQQL 33
++ S CCLVT + L
Sbjct: 61 IVDSPCCLVTGEYL 20
>gb|CA735567.1|CA735567 wpi1s.pk004.n6 wpi1s Triticum aestivum cDNA clone wpi1s.pk004.n6 5'
end, mRNA sequence
Length = 252
Score = 23.5 bits (45), Expect(2) = 6.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1 / +3
Query: 142 GKDSKWQWRTNAEP 101
G+ S+W WR A P
Sbjct: 51 GRQSQWLWRRLASP 92
Score = 20.3 bits (38), Expect(2) = 6.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / +2
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 230 TCPGGR 247
>gb|CA674554.1|CA674554 wlsu2.pk024.k10 wlsu2 Triticum aestivum cDNA clone
wlsu2.pk024.k10 5' end, mRNA sequence
Length = 464
Score = 24.9 bits (48), Expect(2) = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 24 FSTCPGGR 1
FSTCPGGR
Sbjct: 30 FSTCPGGR 7
Score = 19.9 bits (37), Expect(2) = 6.5
Identities = 8/33 (24%), Positives = 12/33 (36%)
Frame = -1 / -2
Query: 199 IHASWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
+ A W G + ++ GK W W P
Sbjct: 349 LRAPWFPMGREALIFLTPEGKKEPWIWSCEXSP 251
>gb|CK155953.1|CK155953 FGAS036841 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 874
Score = 25.4 bits (49), Expect(2) = 6.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1 / -1
Query: 241 IQFHIARRQCYSP*IHASWQRKGCRSQSNIS 149
+Q + RQC P IH+ + + G Q +I+
Sbjct: 505 LQLKLTARQCSDPSIHSMYIQTGNSHQPSIT 413
Score = 20.3 bits (38), Expect(2) = 6.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -1
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 145 TCPGGR 128
>gb|CA743038.1|CA743038 wri1s.pk002.k13 wri1s Triticum aestivum cDNA clone wri1s.pk002.k13
5' end, mRNA sequence
Length = 260
Score = 22.6 bits (43), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / +2
Query: 24 FSTCPGGR 1
F TCPGGR
Sbjct: 233 FRTCPGGR 256
Score = 21.2 bits (40), Expect(2) = 6.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1 / +1
Query: 193 ASWQRKGCRSQSNISV*GKDSKWQWR 116
+SW+ C +I + DS WQ R
Sbjct: 64 SSWRGSSCLLAVSILIEFFDSLWQCR 141
>gb|CV523024.1|CV523024 LP-34 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 108
Score = 22.6 bits (43), Expect(2) = 6.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / +3
Query: 117 RHCHLLSLP 143
RHCH SLP
Sbjct: 72 RHCHQFSLP 98
Score = 19.4 bits (36), Expect(2) = 6.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / +1
Query: 3 GRPGRY 20
GRPGRY
Sbjct: 7 GRPGRY 24
>gb|CA736148.1|CA736148 wpi1s.pk006.m4 wpi1s Triticum aestivum cDNA clone wpi1s.pk006.m4 5'
end, mRNA sequence
Length = 399
Score = 24.0 bits (46), Expect(2) = 7.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3 / +2
Query: 239 SIPHCAKAMLLTMNTCKLAKEGM*VSIKYLCL 144
S H + A + N C++A+E + +S + CL
Sbjct: 161 SSAHVSSACSVQPNQCRMAQEQLILSYQPCCL 256
Score = 20.3 bits (38), Expect(2) = 7.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / +2
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 377 TCPGGR 394
>gb|BE404331.1|BE404331 WHE0441_A01_A01ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0441_A01_A01, mRNA
sequence
Length = 545
Score = 29.5 bits (58), Expect = 7.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 67 LQDAVLLLHNNWFLLQY 17
+Q A+LL+H N+FLL Y
Sbjct: 469 VQGAILLIHKNYFLLPY 419
>gb|BJ247274.1|BJ247274 BJ247274 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf28g06 5', mRNA sequence
Length = 569
Score = 29.5 bits (58), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 127 ICYLCLKQRYLI 162
+CY CLKQRYL+
Sbjct: 454 LCYRCLKQRYLV 489
>gb|BJ288945.1|BJ288945 BJ288945 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl2g11 5', mRNA sequence
Length = 502
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 190 SWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
+W+R G R+ S+ S S+W+WR + P
Sbjct: 105 TWRRSGRRATSSPSASWAASRWRWR*SPGP 194
>gb|BJ295229.1|BJ295229 BJ295229 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl2g11 3', mRNA sequence
Length = 423
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 190 SWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
+W+R G R+ S+ S S+W+WR + P
Sbjct: 318 TWRRSGRRATSSPSASWAASRWRWR*SPGP 229
>gb|BJ318995.1|BJ318995 BJ318995 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf4f22 3', mRNA sequence
Length = 645
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 190 SWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
+W+R G R+ S+ S S+W+WR + P
Sbjct: 415 TWRRSGRRATSSPSASWAASRWRWR*SPGP 326
>gb|CA644458.1|CA644458 wre1n.pk0083.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0083.d5
5' end, mRNA sequence
Length = 577
Score = 29.5 bits (58), Expect = 7.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 93 RCHGSAFVRHCHLLSLPQT 149
+C + RHCHL+ LPQT
Sbjct: 360 QCSEAISSRHCHLIFLPQT 416
>gb|CA669690.1|CA669690 wlsu1.pk022.d8 wlsu1 Triticum aestivum cDNA clone wlsu1.pk022.d8
5' end, mRNA sequence
Length = 164
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -1
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 95 FFFFFFFFFFFFFFFFFFFTCPGGR 21
>gb|CA736617.1|CA736617 wpi1s.pk008.g16 wpi1s Triticum aestivum cDNA clone
wpi1s.pk008.g16 5' end, mRNA sequence
Length = 415
Score = 29.5 bits (58), Expect = 7.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 45 YTTIGFYFSTCPGGR 1
Y T+G STCPGGR
Sbjct: 45 YRTVGIKTSTCPGGR 1
>gb|CA737060.1|CA737060 wpi1s.pk009.b9 wpi1s Triticum aestivum cDNA clone wpi1s.pk009.b9
5' end, mRNA sequence
Length = 415
Score = 29.5 bits (58), Expect = 7.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 45 YTTIGFYFSTCPGGR 1
Y T+G STCPGGR
Sbjct: 45 YRTVGIKTSTCPGGR 1
>gb|CA742943.1|CA742943 wri1s.pk004.o20 wri1s Triticum aestivum cDNA clone
wri1s.pk004.o20 5' end, mRNA sequence
Length = 519
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -3
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
FD +L+C + STCPGGR
Sbjct: 79 FDSKALLNCLFPLSSVLTSTCPGGR 5
>gb|CA743384.1|CA743384 wri1s.pk005.c7 wri1s Triticum aestivum cDNA clone wri1s.pk005.c7
5' end, mRNA sequence
Length = 599
Score = 29.5 bits (58), Expect = 7.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3 / +3
Query: 3 GRPGRY*SRNQLLCSNKTAS*RNQS 77
GRPGRY + +LCSN +S N S
Sbjct: 3 GRPGRYIFQ*VMLCSNXASSQGNSS 77
>gb|CA745112.1|CA745112 wri1s.pk008.c6 wri1s Triticum aestivum cDNA clone wri1s.pk008.c6
5' end, mRNA sequence
Length = 220
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 49 LLHNNWFLLQYLPGRP 2
L+ +N FLL YLPGRP
Sbjct: 53 LVRSNNFLLMYLPGRP 6
>gb|CD882450.1|CD882450 F1.106M22F010330 F1 Triticum aestivum cDNA clone F1106M22, mRNA
sequence
Length = 543
Score = 29.5 bits (58), Expect = 7.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1 / -3
Query: 115 FAIAICYLCLKQRYLIETYIPSFANLHVFMVSNIAFAQCGIESC 246
F +CY L + L +P++A H+F A + C +C
Sbjct: 244 FHFVVCYSSLHKTRL*NMALPTYAAPHIFASGMDASSSCTFPTC 113
>gb|CK153190.1|CK153190 FGAS031770 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 860
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -2
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 202 FFFFFFFFFFFFFFFFFFFTCPGGR 128
>gb|CK163281.1|CK163281 FGAS015903 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1066
Score = 29.5 bits (58), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 127 ICYLCLKQRYLI 162
+CY CLKQRYL+
Sbjct: 649 LCYRCLKQRYLV 684
>gb|CK168629.1|CK168629 FGAS043211 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1222
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -2
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 141 FFFFFFFFFFFFFFFFFFFTCPGGR 67
>gb|CK168934.1|CK168934 FGAS043531 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 920
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -2
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 202 FFFFFFFFFFFFFFFFFFFTCPGGR 128
>gb|CK203780.1|CK203780 FGAS012313 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 29.5 bits (58), Expect = 7.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 67 LQDAVLLLHNNWFLLQY 17
+Q A+LL+H N+FLL Y
Sbjct: 513 VQGAILLIHKNYFLLPY 463
>gb|CK213656.1|CK213656 FGAS025565 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1079
Score = 29.5 bits (58), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 127 ICYLCLKQRYLI 162
+CY CLKQRYL+
Sbjct: 706 LCYRCLKQRYLV 741
>gb|CK216656.1|CK216656 FGAS028654 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1052
Score = 29.5 bits (58), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 127 ICYLCLKQRYLI 162
+CY CLKQRYL+
Sbjct: 140 LCYRCLKQRYLV 105
>gb|CV760880.1|CV760880 FGAS055266 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 830
Score = 29.5 bits (58), Expect = 7.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2 / +2
Query: 138 KIANGNGEQTLSRDIYRLGHRFDFFRMLSC 49
KI G G+Q LS RFD R LSC
Sbjct: 611 KILRGKGQQALSMVASEKNLRFDIRRCLSC 700
>gb|DR731722.1|DR731722 FGAS077642 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 863
Score = 29.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2 / -1
Query: 75 FDFFRMLSCYYTTIGFYFSTCPGGR 1
F FF ++ F+F TCPGGR
Sbjct: 200 FFFFFFFFFFFFFFFFFFFTCPGGR 126
>gb|CA736494.1|CA736494 wpi1s.pk007.f13 wpi1s Triticum aestivum cDNA clone
wpi1s.pk007.f13 5' end, mRNA sequence
Length = 246
Score = 22.1 bits (42), Expect(2) = 8.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 21 STCPGGR 1
STCPGGR
Sbjct: 21 STCPGGR 1
Score = 21.2 bits (40), Expect(2) = 8.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1 / -1
Query: 178 KGCRSQSNISV*GKDSKWQWR 116
KGC +S+ S *G + WR
Sbjct: 129 KGCCYKSSPSQ*GTGRRCSWR 67
>gb|AJ603002.1|AJ603002 AJ603002 T06 Triticum aestivum cDNA clone F07_T06_plate_43, mRNA
sequence
Length = 327
Score = 22.6 bits (43), Expect(2) = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +3
Query: 30 FYFSTCPGGR 1
F STCPGGR
Sbjct: 294 FSGSTCPGGR 323
Score = 21.2 bits (40), Expect(2) = 8.3
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1 / +1
Query: 154 ISV*GKDSKWQWR 116
+S G D +W WR
Sbjct: 175 VSSVGADRRWSWR 213
>gb|CA723833.1|CA723833 wds1f.pk002.e22 wds1f Triticum aestivum cDNA clone wds1f.pk002.e22
5' end, mRNA sequence
Length = 472
Score = 26.3 bits (51), Expect(2) = 8.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / +3
Query: 164 RPTSLPLPTCMYSW*VTLPSRNVEL 238
RPTS P P W T P+R+ L
Sbjct: 108 RPTSCPAPATSRCWSGTSPTRSKSL 182
Score = 18.0 bits (33), Expect(2) = 8.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +1 / +2
Query: 1 AAARAGTEVETNCCVVTRQHPEEIKAMT*PVD 96
AAA A + R H + + A+ P+D
Sbjct: 8 AAAMANMQESLALVGTMRGHNDVVTAIAAPID 103
>gb|CA704220.1|CA704220 wdk1c.pk012.l8 wdk1c Triticum aestivum cDNA clone wdk1c.pk012.l8 5'
end, mRNA sequence
Length = 478
Score = 25.4 bits (49), Expect(2) = 9.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2 / +3
Query: 164 RPTSLPLPTCMYSW*VTLPSRN 229
RPTS P P W T P+R+
Sbjct: 126 RPTSCPAPATSRCWSGTSPTRS 191
Score = 18.9 bits (35), Expect(2) = 9.0
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +1 / +2
Query: 1 AAARAGTEVETNCCVVTRQHPEEIKAMT*PVD 96
AAA A + R H + + A+ P+D
Sbjct: 26 AAAMANMQESLGLVGTMRGHNDVVTAIAAPID 121
>gb|CA676055.1|CA676055 wlsu2.pk019.g9 wlsu2 Triticum aestivum cDNA clone wlsu2.pk019.g9
5' end, mRNA sequence
Length = 478
Score = 24.9 bits (48), Expect(2) = 9.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 24 FSTCPGGR 1
FSTCPGGR
Sbjct: 28 FSTCPGGR 5
Score = 19.4 bits (36), Expect(2) = 9.0
Identities = 8/30 (26%), Positives = 11/30 (36%)
Frame = -1 / -2
Query: 190 SWQRKGCRSQSNISV*GKDSKWQWRTNAEP 101
SW G + ++ GK W W P
Sbjct: 339 SWFPXGREALIFLTQRGKKEPWIWSCEVSP 250
>gb|CA743994.1|CA743994 wri1s.pk006.g13 wri1s Triticum aestivum cDNA clone
wri1s.pk006.g13 5' end, mRNA sequence
Length = 206
Score = 22.6 bits (43), Expect(2) = 9.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 62 GCCLVTTQQLVSTSVPARAA 3
G L T +L+ +VPARAA
Sbjct: 67 GLLLXTIARLLLAAVPARAA 8
Score = 20.3 bits (38), Expect(2) = 9.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / -1
Query: 18 TCPGGR 1
TCPGGR
Sbjct: 23 TCPGGR 6
>gb|BJ292594.1|BJ292594 BJ292594 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28g14 5', mRNA sequence
Length = 685
Score = 23.5 bits (45), Expect(2) = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 124 AICYLCLKQRYLIETYIPSFANLHV 198
A+C LCL + Y +T + A+L V
Sbjct: 545 AVCALCLWEMYKGDTQL*LLAHLEV 619
Score = 21.2 bits (40), Expect(2) = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / +1
Query: 24 SRNQLLCSNKTAS*RNQSDDLAGRCHGSAFVRHC 125
S + ++CS S* + DL HGS HC
Sbjct: 280 SASLVVCSFIFGS*LHALVDLMQSPHGSMGASHC 381
>gb|BJ299046.1|BJ299046 BJ299046 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28g14 3', mRNA sequence
Length = 698
Score = 23.5 bits (45), Expect(2) = 9.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -1
Query: 124 AICYLCLKQRYLIETYIPSFANLHV 198
A+C LCL + Y +T + A+L V
Sbjct: 287 AVCALCLWEMYKGDTQL*LLAHLEV 213
Score = 21.2 bits (40), Expect(2) = 9.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / -3
Query: 24 SRNQLLCSNKTAS*RNQSDDLAGRCHGSAFVRHC 125
S + ++CS S* + DL HGS HC
Sbjct: 552 SASLVVCSFIFGS*LHALVDLMQSPHGSMGASHC 451
Database: Triticum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:43 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 250,631,201
Number of Sequences: 636343
Number of extensions: 3135456
Number of successful extensions: 354814
Number of sequences better than 10.0: 143
length of database: 122,413,413
effective HSP length: 49
effective length of database: 91,232,606
effective search space used: 2919443392
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)