TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM12h10.yg.2.1
(339 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusar... 219 1e-056
gb|CK210964.1|CK210964 FGAS022791 Triticum aestivum FGAS: L... 195 1e-049
gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: L... 117 9e-049
gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aes... 176 8e-044
gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium gra... 144 5e-034
gb|CV761327.1|CV761327 FGAS055715 Triticum aestivum FGAS: L... 133 7e-031
gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: L... 131 3e-030
gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anth... 131 4e-030
gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA... 90 3e-029
gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anth... 127 6e-029
gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDN... 91 4e-028
gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum... 121 3e-027
gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium gra... 119 1e-026
gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aes... 94 3e-026
gb|CV777984.1|CV777984 FGAS072392 Triticum aestivum FGAS: L... 116 9e-026
gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. du... 113 9e-025
gb|CK203891.1|CK203891 FGAS012426 Triticum aestivum FGAS: L... 110 6e-024
gb|CK204215.1|CK204215 FGAS012751 Triticum aestivum FGAS: L... 110 6e-024
gb|BE415659.1|BE415659 MWL037.F12000424 ITEC MWL Wheat Root... 106 1e-022
gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis... 105 3e-022
gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA... 105 3e-022
gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivu... 104 5e-022
gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum... 100 9e-021
>gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST#6PSP6_B03_b3_025, mRNA sequence
Length = 695
Score = 219 bits (472), Expect = 1e-056
Identities = 94/112 (83%), Positives = 95/112 (84%)
Frame = -3 / +2
Query: 337 FSSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIEL 158
FSSV TFSMGTKS ILHGGAKYRAT RGFVVQHKSFAENY LYAR HFIKAIEL
Sbjct: 215 FSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQHKSFAENYRLYARSHFIKAIEL 394
Query: 157 GIILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
GIILTVYAAHSVIA+NTLVYI SSWFLVVSWIMAPFAF SGFDWLKTV
Sbjct: 395 GIILTVYAAHSVIARNTLVYIVMMISSWFLVVSWIMAPFAFNPSGFDWLKTV 550
Score = 194 bits (418), Expect = 3e-049
Identities = 89/112 (79%), Positives = 90/112 (80%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TVFNQSKP ANGA+I DTTRNQL M*TSVFLAITL AAYTVNIIPSSIAFMKW
Sbjct: 549 TVFNQSKPEGLNANGAMIQDTTRNQLDIIMTM*TSVFLAITL*AAYTVNIIPSSIAFMKW 370
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDEK 338
LAYS *FSAKLLCCTTKPR VARYFAPP*RI WL VPMENV TDEK
Sbjct: 369 LLAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLFVPMENV*KTDEK 214
Score = 169 bits (363), Expect = 1e-041
Identities = 69/112 (61%), Positives = 79/112 (70%)
Frame = +2 / -2
Query: 2 HCFQPIKTRXXKSKWSHNP*YHQKPARXXXXYVNKCILGNNTVCSIHSQYYSKLYCLYEV 181
H FQPIK R K KWSH+P +H+KPAR YVNKC+ GN+TV IH QYYS+LY LYEV
Sbjct: 550 HSFQPIKARRIKCKWSHDPGHHEKPARYHHDYVNKCVPGNHTVSGIHGQYYSELYSLYEV 371
Query: 182 APSIQXVIFSKTLVLHNKTTXSSTVFCTTMKDXXVXXXALSSHGKCXXHR*K 337
APSI VIFS+TL+LHNK T SS + CTTMK+ A SHGKC R K
Sbjct: 370 APSI*PVIFSETLMLHNKATASSPILCTTMKNCSAIVMAFCSHGKCVEDRRK 215
Score = 120 bits (257), Expect = 5e-027
Identities = 55/80 (68%), Positives = 61/80 (76%)
Frame = +1 / -1
Query: 1 TLFSTNQNQXX*KQMEP*SMIPPETS*XXXXXCKQVYSWQ*HCVQHTQSILFQALLPL*S 180
T FSTNQ+Q * QMEP*S P ETS* CKQV SWQ HC +HT+SILF+AL PL*S
Sbjct: 551 TQFSTNQSQKD*MQMEP*SRTPRETS*ISS*LCKQVCSWQSHCERHTRSILFRAL*PL*S 372
Query: 181 GP*HTACNFQQNSCAAQQNH 240
G *H ACNFQ+NS AAQQ+H
Sbjct: 371 GS*HIACNFQRNSYAAQQSH 312
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = -2 / +1
Query: 338 FFICVXHIFHGN*EPXX*XXNPSWWCKIPCYXXWFCCAAQEFC*KLXAVC*GPLHKGNRA 159
FF+C+ HIFHGN +P N SWWCK+ Y W CCAA EF *KL A+C* PLHKG RA
Sbjct: 214 FFVCLLHIFHGNKKPLLWPNNSSWWCKVSGYWPWLCCAA*EFR*KLQAIC*EPLHKGYRA 393
Query: 158 WNNID 144
NNID
Sbjct: 394 RNNID 408
Score = 42.8 bits (87), Expect(2) = 1e-029
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 101 LHXXXXX*LVSGGIMDYGSICFXXXWF*LVEN 6
LH *LVS G++D+GSIC W *LVEN
Sbjct: 451 LHSHDDI*LVSRGVLDHGSICI*SFWL*LVEN 546
>gb|CK210964.1|CK210964 FGAS022791 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1212
Score = 195 bits (421), Expect = 1e-049
Identities = 82/92 (89%), Positives = 83/92 (90%)
Frame = -3 / +2
Query: 277 ILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVY 98
ILHGGAKYRAT RGFVVQHKSFAENY LYAR HFIKAIELGIILTVYAAHSVIA+NTLVY
Sbjct: 71 ILHGGAKYRATGRGFVVQHKSFAENYRLYARSHFIKAIELGIILTVYAAHSVIARNTLVY 250
Query: 97 IXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I SSWFLVVSWIMAPFAF SGFDWLKTV
Sbjct: 251 IVMMISSWFLVVSWIMAPFAFNPSGFDWLKTV 346
Score = 170 bits (366), Expect = 5e-042
Identities = 77/92 (83%), Positives = 78/92 (84%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TVFNQSKP ANGA+I DTTRNQL M*TSVFLAITL AAYTVNIIPSSIAFMKW
Sbjct: 345 TVFNQSKPEGLNANGAMIQDTTRNQLDIIMTM*TSVFLAITL*AAYTVNIIPSSIAFMKW 166
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RI 278
LAYS *FSAKLLCCTTKPR VARYFAPP*RI
Sbjct: 165 LLAYSL*FSAKLLCCTTKPRPVARYFAPP*RI 70
Score = 149 bits (320), Expect = 1e-035
Identities = 60/92 (65%), Positives = 70/92 (76%)
Frame = +2 / -3
Query: 2 HCFQPIKTRXXKSKWSHNP*YHQKPARXXXXYVNKCILGNNTVCSIHSQYYSKLYCLYEV 181
H FQPIK R K KWSH+P +H+KPA YVNKC+ GN+TV IH QYYS+LY LYEV
Sbjct: 346 HSFQPIKARRIKCKWSHDPGHHKKPA*YHHDYVNKCVPGNHTVSGIHGQYYSELYSLYEV 167
Query: 182 APSIQXVIFSKTLVLHNKTTXSSTVFCTTMKD 277
APSI VIFS+TL+LHNK T SS + CTTMK+
Sbjct: 166 APSI*PVIFSETLMLHNKATASSPILCTTMKN 71
Score = 118 bits (253), Expect = 2e-026
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / -2
Query: 1 TLFSTNQNQXX*KQMEP*SMIPPETS*XXXXXCKQVYSWQ*HCVQHTQSILFQALLPL*S 180
T FSTNQ+Q * QMEP*S P ETS CKQV SWQ HC +HT+SILF+AL PL*S
Sbjct: 347 TQFSTNQSQKD*MQMEP*SRTPQETSLISS*LCKQVCSWQSHCERHTRSILFRAL*PL*S 168
Query: 181 GP*HTACNFQQNSCAAQQNH 240
G *H ACNFQ+NS AAQQ+H
Sbjct: 167 GS*HIACNFQRNSYAAQQSH 108
Score = 79.9 bits (168), Expect(2) = 6e-021
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = -2 / +1
Query: 278 NPSWWCKIPCYXXWFCCAAQEFC*KLXAVC*GPLHKGNRAWNNID 144
N SWWCK+ Y W CCAA EF *KL A+C* PLHKG RA NNID
Sbjct: 70 NSSWWCKVSGYWPWLCCAA*EFR*KLQAIC*EPLHKGYRARNNID 204
Score = 40.0 bits (81), Expect(2) = 6e-021
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 101 LHXXXXX*LVSGGIMDYGSICFXXXWF*LVEN 6
LH LVS G++D+GSIC W *LVEN
Sbjct: 247 LHSHDDIKLVSCGVLDHGSICI*SFWL*LVEN 342
>gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1087
Score = 117 bits (251), Expect(2) = 9e-049
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = -3 / +3
Query: 181 HFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
HFIKAIELGIILTVYAAHSVIA+NTLVYI SS FLVVSWIMAPFA SGFDWLKTV
Sbjct: 726 HFIKAIELGIILTVYAAHSVIARNTLVYIVMMISSLFLVVSWIMAPFALNPSGFDWLKTV 905
Score = 99.6 bits (211), Expect(2) = 2e-042
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMK 179
TVFNQSKP ANGA+I DTTRN+L M*TSVFLAITL AAYTVNIIPSSIAFMK
Sbjct: 904 TVFNQSKPEGFNANGAMIQDTTRNKLDIIMTM*TSVFLAITL*AAYTVNIIPSSIAFMK 728
Score = 95.9 bits (203), Expect(2) = 4e-034
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2 / -3
Query: 2 HCFQPIKTRXXKSKWSHNP*YHQKPARXXXXYVNKCILGNNTVCSIHSQYYSKLYCLYEV 181
H FQPIK R KWSH+P +H+K AR YVNKC+ GN+TV IH QYYS+LY LYEV
Sbjct: 905 HSFQPIKARRI*CKWSHDPGHHEKQARYHHDYVNKCVPGNHTVSGIHGQYYSELYSLYEV 726
Score = 95.5 bits (202), Expect(2) = 9e-049
Identities = 41/51 (80%), Positives = 41/51 (80%)
Frame = -3 / +1
Query: 337 FSSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYAR 185
FSSV TFSMGTKS ILHGGAKYRAT RGFVVQHKSFAENY LYAR
Sbjct: 571 FSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQHKSFAENYRLYAR 723
Score = 92.3 bits (195), Expect(2) = 2e-042
Identities = 41/51 (80%), Positives = 41/51 (80%)
Frame = +3 / -3
Query: 186 LAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDEK 338
LAYS *FSAKLLCCTTKPR VARYFAPP*RI WL VPMENV TDEK
Sbjct: 722 LAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLFVPMENV*KTDEK 570
Score = 84.0 bits (177), Expect(2) = 3e-021
Identities = 39/60 (65%), Positives = 43/60 (71%)
Frame = +1 / -2
Query: 7 FSTNQNQXX*KQMEP*SMIPPETS*XXXXXCKQVYSWQ*HCVQHTQSILFQALLPL*SGP 186
FSTNQ+Q QMEP*S P ETS* CKQV SWQ HC +HT+SILF+AL PL*S P
Sbjct: 900 FSTNQSQKDLMQMEP*SRTPRETS*ISS*LCKQVCSWQSHCERHTRSILFRAL*PL*SAP 721
Score = 81.3 bits (171), Expect(3) = 1e-025
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = -2 / +3
Query: 338 FFICVXHIFHGN*EPXX*XXNPSWWCKIPCYXXWFCCAAQEFC*KLXAVC* 186
FF+C+ HIFHGN +P N SWWCK+ Y W CCAA EF *KL A+C*
Sbjct: 570 FFVCLLHIFHGNKKPLLWPNNSSWWCKVSGYWPWLCCAA*EFR*KLQAIC* 722
Score = 68.4 bits (143), Expect(2) = 4e-034
Identities = 30/52 (57%), Positives = 34/52 (65%)
Frame = +2 / -2
Query: 182 APSIQXVIFSKTLVLHNKTTXSSTVFCTTMKDXXVXXXALSSHGKCXXHR*K 337
APSI VIFS+TL+LHNK T SS + CTTMK+ A SHGKC R K
Sbjct: 726 APSI*PVIFSETLMLHNKATASSPILCTTMKNCSAIVMAFCSHGKCVEDRRK 571
Score = 44.1 bits (90), Expect(3) = 1e-025
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / +2
Query: 101 LHXXXXX*LVSGGIMDYGSICFXXXWF*LVEN 6
LH *LVS G++D+GSIC W *LVEN
Sbjct: 806 LHSHDDI*LVSRGVLDHGSICIKSFWL*LVEN 901
Score = 36.8 bits (74), Expect(2) = 3e-021
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 187 *HTACNFQQNSCAAQQNH 240
*H ACNFQ+NS AAQQ+H
Sbjct: 721 *HIACNFQRNSYAAQQSH 668
Score = 28.1 bits (55), Expect(3) = 1e-025
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 206 KLXAVC*GPLHKGNRAWNNID 144
K+ G LHKG RA NNID
Sbjct: 701 KITGYMLGALHKGYRARNNID 763
>gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aestivum cDNA clone G118101K08,
mRNA sequence
Length = 602
Score = 176 bits (379), Expect = 8e-044
Identities = 74/112 (66%), Positives = 84/112 (75%)
Frame = -3 / +3
Query: 337 FSSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIEL 158
F+SV TFSMGTK+ ILHGGAKYRAT RGFVV+HK FAENY LYAR HF+KAIEL
Sbjct: 231 FASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARSHFLKAIEL 410
Query: 157 GIILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
G+IL +YA++S A NT VYI SSWFLV SWI+APF F SG D LK +
Sbjct: 411 GVILVLYASYSSSAGNTFVYILLTLSSWFLVSSWILAPFIFNPSGLDCLKNL 566
Score = 126 bits (270), Expect = 9e-029
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = +3 / -2
Query: 9 FNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKWPL 188
F QSKP K GA IH+ T+NQL M T+VF A+ L A NI PSSIAF KW
Sbjct: 559 FRQSKPDGLKMKGAKIHEDTKNQLESVSRMYTNVFPALLL*DA*RTNITPSSIAFRKWLR 380
Query: 189 AYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AYS *FSA LC TT PR VARYFAPP*RI +LVPME V TD
Sbjct: 379 AYSL*FSANFLCSTTNPRPVARYFAPP*RIVRP**CVLVPMEKV*KTD 236
>gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_F07_K13,
mRNA sequence
Length = 684
Score = 144 bits (308), Expect = 5e-034
Identities = 58/111 (52%), Positives = 72/111 (64%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TFS+GTK+ +LHGGA+YRAT RGFVV H FAENY LY+R HF+K IEL
Sbjct: 79 ASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELM 258
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+V +W+ APF F SGF+W K V
Sbjct: 259 ILLVVYEIFGQTYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIV 411
>gb|CV761327.1|CV761327 FGAS055715 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 871
Score = 133 bits (285), Expect = 7e-031
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 304 TKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHS 125
T+ ILHGGAKYRAT RGFVV+H FA+NY LY+R HF+KA+E+ ++L VY A+
Sbjct: 99 TRPHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHFVKALEVALLLIVYIAYG 278
Query: 124 VIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+ +I SSW +V+SW+ AP+ F SGF+W KTV
Sbjct: 279 YTKGGSSSFILLTISSWIMVISWLFAPYIFNPSGFEWQKTV 401
>gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 131 bits (281), Expect = 3e-030
Identities = 53/111 (47%), Positives = 70/111 (63%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TFS+GTK+ +LHGGA+Y+AT RGF+V H FA NY LY+R HF+K I+L
Sbjct: 193 ASVFFTFSLGTKTRYYRKTLLHGGAEYKATGRGFLVFHAKFANNYRLYSRTHFVKGIDLM 372
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L V+ + + YI S WF+V +W+ APF F SGF W K V
Sbjct: 373 ILLIVFEIFGHSYRGAIAYIFITFSMWFMVATWLFAPFLFKPSGF*WQKIV 525
>gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4044_F09_L18, mRNA sequence
Length = 598
Score = 131 bits (280), Expect = 4e-030
Identities = 48/92 (52%), Positives = 64/92 (69%)
Frame = -3 / +3
Query: 277 ILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVY 98
ILHGGAKYRAT RGFVV+H FAENY LY+R HF+K +E+ ++L ++ A+ + Y
Sbjct: 12 ILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLEVALLLVIFLAYGFNNSGAIGY 191
Query: 97 IXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I SSWF+ +SW+ AP+ F SGF+W K V
Sbjct: 192 ILLSISSWFMALSWLFAPYVFNPSGFEWQKVV 287
>gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13j08 5', mRNA sequence
Length = 605
Score = 89.5 bits (189), Expect(2) = 3e-029
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = -3 / +3
Query: 235 FVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIA 116
FVVQHKSFAENY LYAR HFIKAIELGIILTVYAAHSVIA
Sbjct: 486 FVVQHKSFAENYRLYARSHFIKAIELGIILTVYAAHSVIA 605
Score = 84.0 bits (177), Expect(2) = 2e-027
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +3 / -2
Query: 117 AITLCAAYTVNIIPSSIAFMKWPLAYSX*FSAKLLCCTTK 236
AITL AAYTVNIIPSSIAFMKW LAYS *FSAKLLCCTTK
Sbjct: 604 AITL*AAYTVNIIPSSIAFMKWLLAYSL*FSAKLLCCTTK 485
Score = 57.4 bits (119), Expect(2) = 3e-029
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 337 FSSVXXTFSMGTKSXXXDXXILHGGAKYRATXRG 236
FSSV TFSMGTKS ILHGGAKYRAT RG
Sbjct: 383 FSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRG 484
Score = 57.0 bits (118), Expect(2) = 2e-027
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 234 KPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDEK 338
+PR VARYFAPP*RI WL VPMENV TDEK
Sbjct: 486 RPRPVARYFAPP*RIVRP**WLFVPMENV*KTDEK 382
>gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4301_E08_I15, mRNA sequence
Length = 330
Score = 127 bits (271), Expect = 6e-029
Identities = 51/104 (49%), Positives = 66/104 (63%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
++V TFS+GTK+ +LHGGA+YR T RGFVV H FAENY LY+R HF+K IEL
Sbjct: 17 ATVFFTFSLGTKTHYYGRMLLHGGAQYRGTGRGFVVFHAKFAENYRLYSRSHFVKGIELM 196
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSG 23
I+L VY ++T+ YI S W L ++W+ PF F SG
Sbjct: 197 ILLIVYQLFGQSYRSTIAYIFITISMWILALTWLFGPFLFNPSG 328
>gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDNA clone E11_O232_plate_16, mRNA
sequence
Length = 592
Score = 91.3 bits (193), Expect(2) = 4e-028
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -3 / +2
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIE 161
SV TFS+GT++ ILHGGAKYRAT RGFVV+H FAENY LY+R HF+K +E
Sbjct: 8 SVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLE 178
Score = 51.9 bits (107), Expect(2) = 4e-028
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -3 / +3
Query: 172 KAIELGIILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
K ++ ++L ++ A+ + YI SS F+ +SW+ AP+ F SGF+W K V
Sbjct: 168 KGWKVALLLVIFLAYGFNNNGAIGYILLSISS*FMALSWLFAPYVFNPSGFEWQKVV 338
>gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum cDNA clone TaE05029A09R, mRNA
sequence
Length = 603
Score = 121 bits (259), Expect = 3e-027
Identities = 48/91 (52%), Positives = 59/91 (64%)
Frame = -3 / +1
Query: 274 LHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYI 95
+ GGA+YRAT RGFVV H FAENY LY+R HF+K IEL I+L VY + + YI
Sbjct: 7 VRGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLVVYEIFGQTYRGAITYI 186
Query: 94 XXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
S WF+V +W+ APF F SGF+W K V
Sbjct: 187 FITVSMWFMVGTWLFAPFLFNPSGFEWQKIV 279
>gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2635_H07_P13,
mRNA sequence
Length = 514
Score = 119 bits (255), Expect = 1e-026
Identities = 48/94 (51%), Positives = 62/94 (65%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TFS+GTK+ +LHGGA+YRAT RGFVV H FAENY LY+R HF+K IEL
Sbjct: 233 ASVFFTFSLGTKTHYYGKTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELM 412
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWI 53
I+L V+ + + YI S WF+VV+W+
Sbjct: 413 ILLIVFEIFGQSYRGAIAYIFITFSMWFMVVTWL 514
>gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aestivum cDNA clone AZO3102F10,
mRNA sequence
Length = 640
Score = 94.1 bits (199), Expect(2) = 3e-026
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TFS+GTK+ ILHGGAKYR T R FVV H SF ENY LY+R HF+KA EL
Sbjct: 100 ASVFFTFSLGTKAHYYGRTILHGGAKYRPTGRKFVVFHASFTENYQLYSRSHFVKAFELI 279
Query: 154 IILTVY 137
+L +Y
Sbjct: 280 FLLIIY 297
Score = 42.8 bits (87), Expect(2) = 3e-026
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3 / +1
Query: 100 YIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
++ S+WF+ ++W+ APF F +GF W K V
Sbjct: 328 HVMVTYSTWFMAMTWLFAPFLFNPAGFAWHKIV 426
>gb|CV777984.1|CV777984 FGAS072392 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 116 bits (248), Expect = 9e-026
Identities = 43/86 (50%), Positives = 60/86 (69%)
Frame = -3 / +2
Query: 259 KYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXS 80
+YRAT RGFVV+H FA+NY LY+R HF+KA+E+ ++L VY A+ + +I S
Sbjct: 113 QYRATGRGFVVRHIKFADNYRLYSRSHFVKALEVALLLIVYIAYGYTKGGSSSFILLTIS 292
Query: 79 SWFLVVSWIMAPFAFXXSGFDWLKTV 2
SW +V+SW+ AP+ F SGF+W KTV
Sbjct: 293 SWIMVISWLFAPYIFNPSGFEWQKTV 370
>gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04551R, mRNA
sequence
Length = 500
Score = 113 bits (241), Expect = 9e-025
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = -3 / +1
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
SV TFS+GT++ ILHGGAKYRAT RGFVV+H FA+NY LY+R HF+KA+E+ +
Sbjct: 235 SVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHFVKALEVAL 414
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFL 68
+L VY A+ + +I SSWF+
Sbjct: 415 LLIVYIAYGYTKGGSSSFILLTISSWFM 498
>gb|CK203891.1|CK203891 FGAS012426 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 110 bits (235), Expect = 6e-024
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -3 / +2
Query: 253 RATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXSSW 74
R T RGFVV H FA+NY +Y+R HF+K +EL I+L VY A+ ++T +Y+ S W
Sbjct: 116 RPTGRGFVVYHAKFADNYRMYSRSHFVKGLELLILLVVYLAYGKSYRSTSLYLFVTFSIW 295
Query: 73 FLVVSWIMAPFAFXXSGFDWLKTV 2
FLV SW+ APF F S F+W KTV
Sbjct: 296 FLVASWLFAPFIFNPSCFEWQKTV 367
>gb|CK204215.1|CK204215 FGAS012751 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 831
Score = 110 bits (235), Expect = 6e-024
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -3 / +1
Query: 253 RATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXSSW 74
R T RGFVV H FA+NY +Y+R HF+K +EL I+L VY A+ ++T +Y+ S W
Sbjct: 115 RPTGRGFVVYHAKFADNYRMYSRSHFVKGLELLILLVVYLAYGKSYRSTSLYLFVTFSIW 294
Query: 73 FLVVSWIMAPFAFXXSGFDWLKTV 2
FLV SW+ APF F S F+W KTV
Sbjct: 295 FLVASWLFAPFIFNPSCFEWQKTV 366
>gb|BE415659.1|BE415659 MWL037.F12000424 ITEC MWL Wheat Root Library Triticum aestivum cDNA
clone MWL037.F12, mRNA sequence
Length = 467
Score = 106 bits (226), Expect = 1e-022
Identities = 41/78 (52%), Positives = 51/78 (65%)
Frame = -3 / +1
Query: 241 RGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXSSWFLVV 62
RGFVV H FAENY LY+R HF+K IEL +L VY + +T+ YI S WFLV+
Sbjct: 1 RGFVVFHAKFAENYRLYSRSHFVKGIELMTLLIVYQLFGQTSHSTIAYIFVTSSMWFLVL 180
Query: 61 SWIMAPFAFXXSGFDWLK 8
+W+ APF F SGF+W K
Sbjct: 181 TWLFAPFLFNPSGFEWAK 234
>gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 354
Score = 105 bits (223), Expect = 3e-022
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TFS+GTK+ +LHGGA+YRAT RGFVV H FAENY LY+R HF+K IEL
Sbjct: 112 ASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELM 291
Query: 154 IILTVYAAHSVIAKNTLVYI 95
I+L VY K + YI
Sbjct: 292 ILLVVYEIFGQTYKGAITYI 351
>gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 5', mRNA sequence
Length = 628
Score = 105 bits (223), Expect = 3e-022
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -3 / +1
Query: 337 FSSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIEL 158
F SV TFS+GT++ ILHGGAKYRAT RGFVV+H FA+NY LY+R HF+KA+E+
Sbjct: 415 FCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHFVKALEV 594
Query: 157 GIILTVYAAH 128
++L VY A+
Sbjct: 595 ALLLIVYIAY 624
>gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 571
Score = 104 bits (221), Expect = 5e-022
Identities = 41/80 (51%), Positives = 50/80 (62%)
Frame = -3 / +1
Query: 241 RGFVVQHKSFAENYXLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXXXXSSWFLVV 62
RGFVV H FAENY LY+R HF+K IEL I+L VY + + YI S WF+V
Sbjct: 4 RGFVVFHAKFAENYRLYSRSHFVKGIELMILLVVYEIFGQTYRGAITYIFITVSMWFMVG 183
Query: 61 SWIMAPFAFXXSGFDWLKTV 2
+W+ APF F SGF+W K V
Sbjct: 184 TWLFAPFLFNPSGFEWQKIV 243
>gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum cDNA clone TaE15017C07R, mRNA
sequence
Length = 653
Score = 100 bits (212), Expect = 9e-021
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = -3 / +2
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
S+ TFS+GT++ ILHGGAKYRAT RGFVV+H FAENY LY+R HF+K +E+ +
Sbjct: 449 SIFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLEVAL 628
Query: 151 ILTVYAAH 128
+L ++ A+
Sbjct: 629 LLVIFLAY 652
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 252,198,184
Number of Sequences: 636343
Number of extensions: 2586973
Number of successful extensions: 146061
Number of sequences better than 1.0e-020: 30
length of database: 122,413,413
effective HSP length: 50
effective length of database: 90,596,263
effective search space used: 5616968306
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)