TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCL28h07.yg.2.1
(277 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium gra... 198 2e-050
gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium gra... 196 6e-050
gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis... 194 2e-049
gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: L... 180 3e-045
gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anth... 179 6e-045
gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aes... 149 5e-036
gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. du... 146 5e-035
gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA... 145 9e-035
gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aes... 144 2e-034
gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum... 144 2e-034
gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan s... 136 7e-032
gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusar... 135 1e-031
gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum... 131 2e-030
gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDN... 128 2e-029
gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA... 79 6e-027
gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: L... 111 1e-026
gb|CV761327.1|CV761327 FGAS055715 Triticum aestivum FGAS: L... 114 3e-025
gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivu... 111 2e-024
gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anth... 107 4e-023
gb|CK210964.1|CK210964 FGAS022791 Triticum aestivum FGAS: L... 102 1e-021
gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan s... 102 1e-021
>gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2635_H07_P13,
mRNA sequence
Length = 514
Score = 198 bits (426), Expect = 2e-050
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = -1 / +2
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
VLMQLQLASVFFTFSLGTKTHYYG TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF
Sbjct: 212 VLMQLQLASVFFTFSLGTKTHYYGKTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 391
Query: 76 VKGIELMILLIVYEIFGQSYRGAIA 2
VKGIELMILLIV+EIFGQSYRGAIA
Sbjct: 392 VKGIELMILLIVFEIFGQSYRGAIA 466
Score = 111 bits (238), Expect(2) = 1e-031
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / -2
Query: 3 AIAPRYDCPNISYTISKIISSMPFTKWLREYNR*FSANLAWNTTNPRPVALY 158
AIAPRYDCP IS TIS+IISSMP TKWLRE R*FSANLAWNTTNPRPVALY
Sbjct: 465 AIAPRYDCPKISNTISRIISSMPLTKWLRE*RR*FSANLAWNTTNPRPVALY 310
Score = 41.8 bits (85), Expect(2) = 1e-031
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 195 *VLVPRENVKNTDANWSCIST 257
*VLVPRENVK TDAN SC+ST
Sbjct: 273 *VLVPRENVKKTDAN*SCMST 211
>gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_F07_K13,
mRNA sequence
Length = 684
Score = 196 bits (422), Expect = 6e-050
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
VLMQLQLASVFFTFSLGTKTHYYG TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF
Sbjct: 58 VLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 237
Query: 76 VKGIELMILLIVYEIFGQSYRGAI 5
VKGIELMILL+VYEIFGQ+YRGAI
Sbjct: 238 VKGIELMILLVVYEIFGQTYRGAI 309
Score = 105 bits (225), Expect(2) = 5e-031
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = +3 / -2
Query: 6 IAPRYDCPNISYTISKIISSMPFTKWLREYNR*FSANLAWNTTNPRPVALY 158
IAP Y CP ISYT S+IISS+PFTKWLRE +R*FSANLAWNTTNPRPVALY
Sbjct: 308 IAPLYVCPKISYTTSRIISSIPFTKWLRE*SR*FSANLAWNTTNPRPVALY 156
Score = 46.0 bits (94), Expect(2) = 5e-031
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 195 *VLVPRENVKNTDANWSCIST 257
*VLVP ENVK TDANWSC+ST
Sbjct: 119 *VLVPSENVKKTDANWSCMST 57
>gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 354
Score = 194 bits (419), Expect = 2e-049
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
VLMQLQLASVFFTFSLGTKTHYYG TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF
Sbjct: 91 VLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 270
Query: 76 VKGIELMILLIVYEIFGQSYRGAI 5
VKGIELMILL+VYEIFGQ+Y+GAI
Sbjct: 271 VKGIELMILLVVYEIFGQTYKGAI 342
Score = 105 bits (225), Expect(2) = 3e-031
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = +3 / -2
Query: 6 IAPRYDCPNISYTISKIISSMPFTKWLREYNR*FSANLAWNTTNPRPVALY 158
IAP Y CP ISYT S+IISS+PFTKWLRE +R*FSANLAWNTTNPRPVALY
Sbjct: 341 IAPLYVCPKISYTTSRIISSIPFTKWLRE*SR*FSANLAWNTTNPRPVALY 189
Score = 46.0 bits (94), Expect(2) = 3e-031
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 195 *VLVPRENVKNTDANWSCIST 257
*VLVP ENVK TDANWSC+ST
Sbjct: 152 *VLVPSENVKKTDANWSCMST 90
>gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 180 bits (388), Expect = 3e-045
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
VLMQLQLASVFFTFSLGTKT YY TLLHGGAEY+ATGRGF+VFHAKFA NYRLYSR+HF
Sbjct: 172 VLMQLQLASVFFTFSLGTKTRYYRKTLLHGGAEYKATGRGFLVFHAKFANNYRLYSRTHF 351
Query: 76 VKGIELMILLIVYEIFGQSYRGAIA 2
VKGI+LMILLIV+EIFG SYRGAIA
Sbjct: 352 VKGIDLMILLIVFEIFGHSYRGAIA 426
Score = 99.6 bits (211), Expect(2) = 1e-027
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / -1
Query: 3 AIAPRYDCPNISYTISKIISSMPFTKWLREYNR*FSANLAWNTTNPRPVALY 158
A+APRY+CP IS TIS+II SMPFTKW+RE R* ANLAWNT NPRPVALY
Sbjct: 425 AMAPRYECPKISNTISRIIRSMPFTKWVRE*RR*LLANLAWNTRNPRPVALY 270
Score = 41.4 bits (84), Expect(2) = 1e-027
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 198 VLVPRENVKNTDANWSCIST 257
VLVPRENVK TDAN SC+ST
Sbjct: 230 VLVPRENVKKTDAN*SCMST 171
>gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4301_E08_I15, mRNA sequence
Length = 330
Score = 179 bits (386), Expect = 6e-045
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = -1 / +2
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 71
M LQLA+VFFTFSLGTKTHYYG LLHGGA+YR TGRGFVVFHAKFAENYRLYSRSHFVK
Sbjct: 2 MNLQLATVFFTFSLGTKTHYYGRMLLHGGAQYRGTGRGFVVFHAKFAENYRLYSRSHFVK 181
Query: 70 GIELMILLIVYEIFGQSYRGAIA 2
GIELMILLIVY++FGQSYR IA
Sbjct: 182 GIELMILLIVYQLFGQSYRSTIA 250
>gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aestivum cDNA clone AZO3102F10,
mRNA sequence
Length = 640
Score = 149 bits (321), Expect = 5e-036
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
+LMQLQ+ASVFFTFSLGTK HYYG T+LHGGA+YR TGR FVVFHA F ENY+LYSRSHF
Sbjct: 79 ILMQLQVASVFFTFSLGTKAHYYGRTILHGGAKYRPTGRKFVVFHASFTENYQLYSRSHF 258
Query: 76 VKGIELMILLIVYEIFGQS 20
VK EL+ LLI+Y +F +S
Sbjct: 259 VKAFELIFLLIIYHLFRKS 315
>gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04551R, mRNA
sequence
Length = 500
Score = 146 bits (314), Expect = 5e-035
Identities = 58/83 (69%), Positives = 70/83 (84%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
+ MQLQ SVFFTFSLGT+THY+G T+LHGGA+YRATGRGFVV H KFA+NYRLYSRSHF
Sbjct: 211 ITMQLQXCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHF 390
Query: 76 VKGIELMILLIVYEIFGQSYRGA 8
VK +E+ +LLIVY +G + G+
Sbjct: 391 VKALEVALLLIVYIAYGYTKGGS 459
>gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 5', mRNA sequence
Length = 628
Score = 145 bits (312), Expect = 9e-035
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -1 / +1
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
+ MQLQ SVFFTFSLGT+THY+G T+LHGGA+YRATGRGFVV H KFA+NYRLYSRSHF
Sbjct: 397 ITMQLQFCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHF 576
Query: 76 VKGIELMILLIVYEIFG 26
VK +E+ +LLIVY +G
Sbjct: 577 VKALEVALLLIVYIAYG 627
>gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aestivum cDNA clone G118101K08,
mRNA sequence
Length = 602
Score = 144 bits (310), Expect = 2e-034
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -1 / +3
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 71
MQLQ ASVF+TFS+GTKTHYYG T+LHGGA+YRATGRGFVV H KFAENYRLY+RSHF+K
Sbjct: 219 MQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARSHFLK 398
Query: 70 GIELMILLIVYEIFGQS 20
IEL ++L++Y + S
Sbjct: 399 AIELGVILVLYASYSSS 449
>gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum cDNA clone TaE15017C07R, mRNA
sequence
Length = 653
Score = 144 bits (309), Expect = 2e-034
Identities = 54/73 (73%), Positives = 66/73 (90%)
Frame = -1 / +2
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
+ MQ QL S+FFTFSLGT+THY+G T+LHGGA+YRATGRGFVV H KFAENYRLYSRSHF
Sbjct: 425 ITMQFQLCSIFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHF 604
Query: 76 VKGIELMILLIVY 38
VKG+E+ +LL+++
Sbjct: 605 VKGLEVALLLVIF 643
>gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan synthase 8 (GSL8) mRNA,
partial cds
Length = 580
Score = 136 bits (291), Expect = 7e-032
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = -1 / +3
Query: 256 VLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHF 77
+ MQ QL S+FFTFSLGT+THY+G T+LHGGA+YRATGRGFVV H KFAENYRLYSRSHF
Sbjct: 381 ITMQFQLCSIFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHF 560
Query: 76 VKGIEL 59
VKG+E+
Sbjct: 561 VKGLEV 578
>gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST#6PSP6_B03_b3_025, mRNA sequence
Length = 695
Score = 135 bits (289), Expect = 1e-031
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -1 / +2
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 71
MQ+ +SVF+TFS+GTK+HYYG T+LHGGA+YRATGRGFVV H FAENYRLY+RSHF+K
Sbjct: 203 MQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQHKSFAENYRLYARSHFIK 382
Query: 70 GIELMILLIVY 38
IEL I+L VY
Sbjct: 383 AIELGIILTVY 415
>gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum cDNA clone TaE05029A09R, mRNA
sequence
Length = 603
Score = 131 bits (280), Expect = 2e-030
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = -1 / +1
Query: 175 LHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFGQSYRGAI 5
+ GGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILL+VYEIFGQ+YRGAI
Sbjct: 7 VRGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLVVYEIFGQTYRGAI 177
Score = 108 bits (231), Expect = 1e-023
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +3 / -2
Query: 6 IAPRYDCPNISYTISKIISSMPFTKWLREYNR*FSANLAWNTTNPRPVALY 158
IAP Y CPNISYT S+IISS+PFTKWLRE +R*FSANLAWNTTNPRPVALY
Sbjct: 176 IAPLYVCPNISYTTSRIISSIPFTKWLRE*SR*FSANLAWNTTNPRPVALY 24
>gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDNA clone E11_O232_plate_16, mRNA
sequence
Length = 592
Score = 128 bits (274), Expect = 2e-029
Identities = 50/59 (84%), Positives = 55/59 (93%)
Frame = -1 / +2
Query: 238 LASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIE 62
L SVFFTFSLGT+THY+G T+LHGGA+YRATGRGFVV H KFAENYRLYSRSHFVKG+E
Sbjct: 2 LCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLE 178
>gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13j08 5', mRNA sequence
Length = 605
Score = 78.5 bits (165), Expect(2) = 6e-027
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = -1 / +2
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRG 137
MQ+ +SVF+TFS+GTK+HYYG T+LHGGA+YRATGRG
Sbjct: 371 MQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRG 484
Score = 59.7 bits (124), Expect(2) = 6e-027
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -1 / +3
Query: 136 FVVFHAKFAENYRLYSRSHFVKGIELMILLIVY 38
FVV H FAENYRLY+RSHF+K IEL I+L VY
Sbjct: 486 FVVQHKSFAENYRLYARSHFIKAIELGIILTVY 584
>gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1087
Score = 111 bits (237), Expect(2) = 1e-026
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1 / +1
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRS 83
MQ+ +SVF+TFS+GTK+HYYG T+LHGGA+YRATGRGFVV H FAENYRLY+RS
Sbjct: 559 MQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQHKSFAENYRLYARS 726
Score = 26.7 bits (52), Expect(2) = 1e-026
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 82 HFVKGIELMILLIVY 38
HF+K IEL I+L VY
Sbjct: 726 HFIKAIELGIILTVY 770
>gb|CV761327.1|CV761327 FGAS055715 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 871
Score = 114 bits (243), Expect = 3e-025
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = -1 / +3
Query: 205 TKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFG 26
T+ HY+G T+LHGGA+YRATGRGFVV H KFA+NYRLYSRSHFVK +E+ +LLIVY +G
Sbjct: 99 TRPHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHFVKALEVALLLIVYIAYG 278
Query: 25 QSYRGA 8
+ G+
Sbjct: 279 YTKGGS 296
>gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 571
Score = 111 bits (237), Expect = 2e-024
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -1 / +1
Query: 145 GRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFGQSYRGAI 5
GRGFVVFHAKFAENYRLYSRSHFVKGIELMILL+VYEIFGQ+YRGAI
Sbjct: 1 GRGFVVFHAKFAENYRLYSRSHFVKGIELMILLVVYEIFGQTYRGAI 141
>gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4044_F09_L18, mRNA sequence
Length = 598
Score = 107 bits (228), Expect = 4e-023
Identities = 42/61 (68%), Positives = 52/61 (85%)
Frame = -1 / +3
Query: 187 GTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVYEIFGQSYRGA 8
G T+LHGGA+YRATGRGFVV H KFAENYRLYSRSHFVKG+E+ +LL+++ +G + GA
Sbjct: 3 GRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLEVALLLVIFLAYGFNNSGA 182
Query: 7 I 5
I
Sbjct: 183 I 185
>gb|CK210964.1|CK210964 FGAS022791 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1212
Score = 102 bits (217), Expect = 1e-021
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -1 / +2
Query: 193 YYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVY 38
YYG T+LHGGA+YRATGRGFVV H FAENYRLY+RSHF+K IEL I+L VY
Sbjct: 56 YYGRTILHGGAKYRATGRGFVVQHKSFAENYRLYARSHFIKAIELGIILTVY 211
>gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan synthase 22 (GSL22)
mRNA, partial cds
Length = 433
Score = 102 bits (217), Expect = 1e-021
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = -1 / +1
Query: 250 MQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAE 107
MQLQ ASVF+TFS+GTKTHYYG T+LHGGA+YRATGRGFVV H KFAE
Sbjct: 289 MQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVVEHKKFAE 432
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 254,477,525
Number of Sequences: 636343
Number of extensions: 3062907
Number of successful extensions: 286741
Number of sequences better than 1.0e-020: 25
length of database: 122,413,413
effective HSP length: 49
effective length of database: 91,232,606
effective search space used: 3831769452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)