TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCA13d08.yg.2.1
(511 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD882024.1|CD882024 F1.105A20F010331 F1 Triticum aestivu... 244 4e-064
gb|CV761646.1|CV761646 FGAS056034 Triticum aestivum FGAS: L... 211 5e-054
gb|CA660005.1|CA660005 wlm1.pk0014.d7 wlm1 Triticum aestivu... 174 8e-049
gb|CD490351.1|CD490351 WHE2496_E01_I02ZT Triticum monococcu... 171 4e-042
>gb|CD882024.1|CD882024 F1.105A20F010331 F1 Triticum aestivum cDNA clone F1105A20, mRNA
sequence
Length = 698
Score = 244 bits (528), Expect = 4e-064
Identities = 101/154 (65%), Positives = 118/154 (76%)
Frame = +1 / +3
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
VLTLVYQPFAFG+T YYEA MNTR RN DV TKGHGG+ +
Sbjct: 237 VLTLVYQPFAFGLTCFFAYYEATMNTRKRNLAGFALFFLSSFALILLDVGTKGHGGIPAY 416
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLVTKAAFES 396
+GVCIISA FGT+DA QG LVGDLSLMCPEFIQSF++GLAASGV+TSALRL+TKAAFE+
Sbjct: 417 IGVCIISAFFGTSDALVQGGLVGDLSLMCPEFIQSFLSGLAASGVITSALRLITKAAFEN 596
Query: 397 SKDGLRIGAILFFSITCLFELVCLLLYTFVFGKL 498
S++GLR GA+LFFS+TC+FEL CLLLY F ++
Sbjct: 597 SQNGLRNGAMLFFSVTCMFELACLLLYAFCLSQI 698
Score = 223 bits (481), Expect = 1e-057
Identities = 104/151 (68%), Positives = 107/151 (70%)
Frame = -3 / -2
Query: 488 KTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD*MN 309
+ N Y RR SSN HV EKNSIAP RRP E SKAA V +LKADV TPDAA P KD*MN
Sbjct: 688 RQNAYRRRQASSNMHVTEKNSIAPFRRPFCEFSKAAFVISLKADVITPDAAKPDRKD*MN 509
Query: 308 SGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPRKKRENPA 129
SGHIKERSPT P* AS VP ALIMHTP PPCPLV TS INAKE RKK PA
Sbjct: 508 SGHIKERSPTKPP*TRASDVPKKALIMHTPMYAGIPPCPLVPTSSNINAKELRKKSAKPA 329
Query: 128 RFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
RFL LVFI AS*Y +V PKAKGW TSV T
Sbjct: 328 RFLFLVFIVAS*YAKKQVSPKAKGWYTSVRT 236
Score = 185 bits (399), Expect = 3e-046
Identities = 81/148 (54%), Positives = 96/148 (64%)
Frame = +3 / +2
Query: 39 THTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDNSGCCN*RTWWAWCFR 218
++TS+PAFCLW + IL*S DEH+ EKS FLP F ++ +G *RTWW
Sbjct: 239 SYTSIPAFCLWTHLLLCIL*SNDEHEEEKSSWFCTFLP*LFRVNIAGRWY*RTWWNSSIH 418
Query: 219 WCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFEISYQGSF*EL 398
WCMHN WD *C SR GWRPFF+VP VHSVL CIR NISFE +Y+GSF EL
Sbjct: 419 WCMHNQCLFWDI*CSCSRWLGWRPFFDVPGVHSVLPVRLGCIRSYNISFETNYKGSFREL 598
Query: 399 KRWSSHWSYTVLFNHMPVRAGVPPAIHI 482
+WSS WSY +L +M VRA +PP I I
Sbjct: 599 TKWSSKWSYAILLGNMHVRASLPPPICI 682
Score = 175 bits (377), Expect = 3e-043
Identities = 86/148 (58%), Positives = 103/148 (69%)
Frame = -2 / -1
Query: 483 ECV*QEAHQLEQACD*KEQYSSNAKTIF*ALKSCLGN*SQS*C*DP*CS*SRHEGLNELW 304
+C+*+EA LE AC +E +SS +KTI * L+SCL N*SQS*C + *CS + EGLNEL
Sbjct: 683 KCI*EEAS*LEHACYREE*HSSISKTIL*VLESCLCN*SQS*CYNS*CSQA*QEGLNELR 504
Query: 303 AH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQNYQCKRTEEEKGKSCKI 124
AH RKVANQ L SI CPK G +YAYTN TMSFS N+Q Y +R +EEK K+ I
Sbjct: 503 AHQRKVANQATLNKSIRCPKKGTDYAYTNVCWNSTMSFSTNVQQY*RERAKEEKCKTS*I 324
Query: 123 SQSCVHLCFIICHDEGYSKGKRLVN*CE 40
S VH CFI+C + G SKGKRLV *C+
Sbjct: 323 SLPRVHRCFIVCKEAGESKGKRLVY*CK 240
Score = 149 bits (319), Expect = 3e-035
Identities = 83/148 (56%), Positives = 96/148 (64%)
Frame = -1 / -3
Query: 484 RMCIAGGTPARTGM*LKRTV*LQCEDHLLSSQKLPW*LISKLMLGPLMQLVPP*RTE*TL 305
+M I GG ART M +R *L EDH +SS+KLP *L+SKLML LMQ RTE*T
Sbjct: 684 KMHIGGGKLARTCMLPRRIA*LHFEDHFVSSRKLPL*LVSKLML*LLMQPSLTGRTE*TP 505
Query: 304 GTLKKGRQPVRLDN*HQLSQIWR*LCIHQRKHQAHHVL*LQHPELSMQKNRGRKGKILQD 125
GT KKGRQP L+ HQ+SQ *LCIHQ + HHVL* Q P + +K+ GRK + D
Sbjct: 504 GTSKKGRQPSHLEQEHQMSQKRH*LCIHQCMLEFHHVL*YQRPAILTRKS*GRKVQNQLD 325
Query: 124 FSILCSSLLHNMS**GLFQRQKAGKLV* 41
FS CSSLLH+M QRQKAG LV*
Sbjct: 324 FSSSCSSLLHSMQRSR*VQRQKAGILV* 241
Score = 105 bits (225), Expect(2) = 6e-027
Identities = 56/107 (52%), Positives = 64/107 (59%)
Frame = +2 / +1
Query: 38 YSH*FTXXXXXXXXXXXHIMKQR*TQD*EILQDFPFSSSVLLH**FWMLQLKDMVGLVFS 217
+ H*+T H MKQR*T+ EI FSS L * W L LKDMV +
Sbjct: 238 FLH*YTSLLPLDSPASLHTMKQR*TRGREI*LVLHFSSLALSR*YCWTLVLKDMVEFQHT 417
Query: 218 LVYA*LAPYLGQLMLIVKAHWLATFL*CAQSSFSPSWRD*LHQGS*H 358
LVYA* P+LG LML+ K WLATFL*CA+SSFSPS + LHQ *H
Sbjct: 418 LVYA*SVPFLGHLMLLFKVAWLATFL*CARSSFSPSCQAWLHQEL*H 558
Score = 35.0 bits (70), Expect(2) = 6e-027
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2 / +1
Query: 401 KMVFALELYCSFQSHACSSWCASCYTH 481
KMVF +EL S + HACSS AS Y H
Sbjct: 601 KMVFEMELCYSSR*HACSS*LASSYMH 681
>gb|CV761646.1|CV761646 FGAS056034 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 843
Score = 211 bits (455), Expect = 5e-054
Identities = 86/111 (77%), Positives = 100/111 (90%)
Frame = +1 / +2
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLT 357
DV TKGHGG+ ++GVCIISA FGT+DA QG LVGDLSLMCPEFIQSF++GLAASGV+T
Sbjct: 119 DVGTKGHGGIPAYIGVCIISAFFGTSDALVQGGLVGDLSLMCPEFIQSFLSGLAASGVIT 298
Query: 358 SALRLVTKAAFESSKDGLRIGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
SALRL+TKAAFE+S++GLR GA+LFFS+TC+FEL CLLLY FVF KLPIVK
Sbjct: 299 SALRLITKAAFENSQNGLRNGAMLFFSVTCMFELACLLLYAFVFPKLPIVK 451
Score = 177 bits (382), Expect = 6e-044
Identities = 82/124 (66%), Positives = 85/124 (68%)
Frame = -3 / -1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASP 330
FTMG+L KTN Y RR SSN HV EKNSIAP RRP E SKAA V +LKADV TPDAA P
Sbjct: 450 FTMGNLGKTNAYRRRQASSNMHVTEKNSIAPFRRPFCEFSKAAFVISLKADVITPDAAKP 271
Query: 329 AMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPR 150
KD*MNSGHIKERSPT P* AS VP ALIMHTP PPCPLV TS I +
Sbjct: 270 DRKD*MNSGHIKERSPTKPP*TSASDVPKKALIMHTPMYAGIPPCPLVPTSSNIRTRGST 91
Query: 149 KKRE 138
RE
Sbjct: 90 ISRE 79
Score = 154 bits (331), Expect = 6e-037
Identities = 64/107 (59%), Positives = 71/107 (66%)
Frame = +3 / +1
Query: 189 *RTWWAWCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFE 368
*RTWW WCMHN WD *C SR GWRPFF+VP VHSVL CIR NISFE
Sbjct: 130 *RTWWNSSIHWCMHNQCLFWDI*CACSRWLGWRPFFDVPGVHSVLPVRLGCIRSYNISFE 309
Query: 369 ISYQGSF*ELKRWSSHWSYTVLFNHMPVRAGVPPAIHIRLRQTTHRE 509
+Y+GSF EL +WSS WSY +L +M VRA +PP I I L Q THRE
Sbjct: 310 TNYKGSFRELTKWSSKWSYAILLGNMHVRASLPPPIRICLSQITHRE 450
Score = 144 bits (309), Expect = 7e-034
Identities = 70/114 (61%), Positives = 81/114 (71%)
Frame = -2 / -3
Query: 510 LHDG*FAEDECV*QEAHQLEQACD*KEQYSSNAKTIF*ALKSCLGN*SQS*C*DP*CS*S 331
LHDG*F +D+CV*+EA LE AC +E +SS +KTI * L+SCL N*SQS*C + *CS +
Sbjct: 451 LHDG*FGKDKCV*EEAS*LEHACYREE*HSSISKTIL*VLESCLCN*SQS*CYNS*CSQA 272
Query: 330 RHEGLNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQNY 169
EGLNEL AH RKVANQ L I CPK G +YAYTN TMSFS N+Q Y
Sbjct: 271 *QEGLNELRAHQRKVANQATLNKRIRCPKKGTDYAYTNVCWNSTMSFSTNVQQY 110
Score = 128 bits (274), Expect = 4e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -1 / -2
Query: 511 TSRWVVCRRRMCIAGGTPARTGM*LKRTV*LQCEDHLLSSQKLPW*LISKLMLGPLMQLV 332
TSRWV+ R+M I GG ART M +R *L EDH +SS+KLP *L+SKLML LMQ
Sbjct: 452 TSRWVIWERQMRIGGGKLARTCMLPRRIA*LHFEDHFVSSRKLPL*LVSKLML*LLMQPS 273
Query: 331 PP*RTE*TLGTLKKGRQPVRLDN*HQLSQIWR*LCIHQRKHQAHHVL*LQHPEL 170
RTE*T GT KKGRQP L+ HQ+SQ *LCIHQ + HHVL* Q P +
Sbjct: 272 LTGRTE*TPGTSKKGRQPSHLEQAHQMSQKRH*LCIHQCMLEFHHVL*YQRPAI 111
Score = 82.6 bits (174), Expect(2) = 1e-024
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 176 WMLQLKDMVGLVFSLVYA*LAPYLGQLMLIVKAHWLATFL*CAQSSFSPSWRD*LHQGS* 355
W L LKDMV +LVYA* P+LG LM + K WLATFL*CA+SSFSPS + LHQ *
Sbjct: 117 WTLVLKDMVEFQHTLVYA*SVPFLGHLMRLFKVAWLATFL*CARSSFSPSCQAWLHQEL* 296
Query: 356 H 358
H
Sbjct: 297 H 299
Score = 50.6 bits (104), Expect(2) = 1e-024
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 401 KMVFALELYCSFQSHACSSWCASCYTHSSSANYPS*S 511
KMVF +EL S + HACSS AS YTH S NYPS*S
Sbjct: 342 KMVFEMELCYSSR*HACSS*LASSYTHLSFPNYPS*S 452
>gb|CA660005.1|CA660005 wlm1.pk0014.d7 wlm1 Triticum aestivum cDNA clone wlm1.pk0014.d7 5'
end, mRNA sequence
Length = 513
Score = 174 bits (375), Expect(2) = 8e-049
Identities = 70/92 (76%), Positives = 84/92 (91%)
Frame = +1 / +1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLT 357
DV TKGHGG+ ++GVCIISA FGT+DA QG LVGDLSLMCPEFIQSF++GLAASGV+T
Sbjct: 1 DVGTKGHGGIPAYIGVCIISAFFGTSDALVQGGLVGDLSLMCPEFIQSFLSGLAASGVIT 180
Query: 358 SALRLVTKAAFESSKDGLRIGAILFFSITCLF 453
SALRL+TKAAFE+S++GLR GA+LFFS+TC+F
Sbjct: 181 SALRLITKAAFENSQNGLRNGAMLFFSVTCMF 276
Score = 144 bits (308), Expect(2) = 1e-037
Identities = 65/91 (71%), Positives = 66/91 (72%)
Frame = -3 / -2
Query: 452 NRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD*MNSGHIKERSPTSA 273
N HV EKNSIAP RRP E SKAA V +LKADV TPDAA P KD*MNSGHIKERSPT
Sbjct: 275 NMHVTEKNSIAPFRRPFCEFSKAAFVISLKADVITPDAAKPDRKD*MNSGHIKERSPTKP 96
Query: 272 P*QLASAVPNMALIMHTPTKTPSPPCPLVAT 180
P* AS VP ALIMHTP PPCPLV T
Sbjct: 95 P*TSASDVPKKALIMHTPMYAGIPPCPLVPT 3
Score = 127 bits (273), Expect(2) = 8e-032
Identities = 52/88 (59%), Positives = 58/88 (65%)
Frame = +3 / +3
Query: 189 *RTWWAWCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFE 368
*RTWW WCMHN WD *C SR GWRPFF+VP VHSVL CIR NISFE
Sbjct: 12 *RTWWNSSIHWCMHNQCLFWDI*CACSRWLGWRPFFDVPGVHSVLPVRLGCIRSYNISFE 191
Query: 369 ISYQGSF*ELKRWSSHWSYTVLFNHMPV 452
+Y+GSF EL +WSS WSY +L +M V
Sbjct: 192 TNYKGSFRELTKWSSKWSYAILLGNMHV 275
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/92 (59%), Positives = 63/92 (68%)
Frame = -2 / -1
Query: 453 EQACD*KEQYSSNAKTIF*ALKSCLGN*SQS*C*DP*CS*SRHEGLNELWAH*RKVANQC 274
E AC +E +SS +KTI * L+SCL N*SQS*C + *CS + EGLNEL AH RKVANQ
Sbjct: 276 EHACYREE*HSSISKTIL*VLESCLCN*SQS*CYNS*CSQA*QEGLNELRAHQRKVANQA 97
Query: 273 ALTISISCPKYGANYAYTNENTKPTMSFSCNI 178
L I CPK G +YAYTN TMSFS N+
Sbjct: 96 TLNKRIRCPKKGTDYAYTNVCWNSTMSFSTNV 1
Score = 97.7 bits (207), Expect(2) = 5e-023
Identities = 51/85 (60%), Positives = 58/85 (68%)
Frame = -1 / -3
Query: 436 KRTV*LQCEDHLLSSQKLPW*LISKLMLGPLMQLVPP*RTE*TLGTLKKGRQPVRLDN*H 257
+R *L EDH +SS+KLP *L+SKLML LMQ RTE*T GT KKGRQP L+ H
Sbjct: 259 RRIA*LHFEDHFVSSRKLPL*LVSKLML*LLMQPSLTGRTE*TPGTSKKGRQPSHLEQAH 80
Query: 256 QLSQIWR*LCIHQRKHQAHHVL*LQ 182
Q+SQ *LCIHQ + HHVL* Q
Sbjct: 79 QMSQKRH*LCIHQCMLEFHHVL*YQ 5
Score = 39.6 bits (80), Expect(2) = 8e-049
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 454 ELVCLLLYTFVFGKLPIVK 510
EL CLLLY FVF KLPIVK
Sbjct: 278 ELACLLLYAFVFPKLPIVK 334
Score = 32.7 bits (65), Expect(2) = 1e-037
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 509 FTMGSLPKTNVYSRRHTSS 453
FTMG+L KTN Y RR SS
Sbjct: 333 FTMGNLGKTNAYRRRQASS 277
Score = 32.2 bits (64), Expect(2) = 2e-027
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 510 LHDG*FAEDECV*QEA 463
LHDG*F +D+CV*+EA
Sbjct: 334 LHDG*FGKDKCV*EEA 287
Score = 29.9 bits (59), Expect(2) = 5e-023
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 511 TSRWVVCRRRMCIAGGTPAR 452
TSRWV+ R+M I GG AR
Sbjct: 335 TSRWVIWERQMRIGGGKLAR 276
Score = 29.5 bits (58), Expect(2) = 8e-032
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 453 RAGVPPAIHIRLRQTTHRE 509
RA +PP I I L Q THRE
Sbjct: 277 RASLPPPIRICLSQITHRE 333
>gb|CD490351.1|CD490351 WHE2496_E01_I02ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2496_E01_I02, mRNA sequence
Length = 636
Score = 171 bits (369), Expect = 4e-042
Identities = 73/113 (64%), Positives = 82/113 (72%)
Frame = +1 / +1
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
VLTLVYQPFAFG+T YYEA MNTR RN DV TKGHGG+ +
Sbjct: 298 VLTLVYQPFAFGLTCFFAYYEATMNTRKRNLAGFALFFLSSFALILLDVGTKGHGGIPAY 477
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLV 375
+GVCIISA FGT+DA QG LVGDLSLM PEFIQSF++GLAASGV+TSALRL+
Sbjct: 478 IGVCIISAFFGTSDALVQGGLVGDLSLMSPEFIQSFLSGLAASGVITSALRLI 636
Score = 164 bits (352), Expect = 8e-040
Identities = 78/112 (69%), Positives = 80/112 (71%)
Frame = -3 / -2
Query: 371 NLKADVRTPDAASPAMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCP 192
+LKADV TPDAA P KD*MNSG IKERSPT P* AS VP ALIMHTP PPCP
Sbjct: 632 SLKADVITPDAAKPDRKD*MNSGDIKERSPTKPP*TRASDVPKKALIMHTPMYAGIPPCP 453
Query: 191 LVATSRIINAKEPRKKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
LV TS INAKE RKK PARFL LVFI AS*Y +V PKAKGW TSV T
Sbjct: 452 LVPTSSNINAKELRKKSAKPARFLFLVFIVAS*YAKKQVSPKAKGWYTSVRT 297
Score = 137 bits (293), Expect = 1e-031
Identities = 66/112 (58%), Positives = 76/112 (67%)
Frame = -2 / -1
Query: 375 N*SQS*C*DP*CS*SRHEGLNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTM 196
N*SQS*C + *CS + EGLNEL H RKVANQ L SI CPK G +YAYTN TM
Sbjct: 636 N*SQS*CYNS*CSQA*QEGLNELRRHQRKVANQATLNKSIRCPKKGTDYAYTNVCWNSTM 457
Query: 195 SFSCNIQNYQCKRTEEEKGKSCKISQSCVHLCFIICHDEGYSKGKRLVN*CE 40
SFS N+Q Y +R +EEK K+ IS VH CFI+C + G SKGKRLV *C+
Sbjct: 456 SFSTNVQQY*RERAKEEKCKTS*ISLPRVHRCFIVCKEAGESKGKRLVY*CK 301
Score = 130 bits (278), Expect = 1e-029
Identities = 59/110 (53%), Positives = 68/110 (61%)
Frame = +3 / +3
Query: 39 THTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDNSGCCN*RTWWAWCFR 218
++TS+PAFCLW + IL*S DEH+ EKS FLP F ++ +G *RTWW
Sbjct: 300 SYTSIPAFCLWTHLLLCIL*SNDEHEEEKSSWFCTFLP*LFRVNIAGRWY*RTWWNSSIH 479
Query: 219 WCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFE 368
WCMHN WD *C SR GWRPFF+V VHSVL CIR NISFE
Sbjct: 480 WCMHNQCLFWDI*CSCSRWLGWRPFFDVAGVHSVLPVRLGCIRSYNISFE 629
Score = 110 bits (235), Expect = 1e-023
Identities = 62/111 (55%), Positives = 71/111 (63%)
Frame = -1 / -3
Query: 373 LISKLMLGPLMQLVPP*RTE*TLGTLKKGRQPVRLDN*HQLSQIWR*LCIHQRKHQAHHV 194
L+SKLML LMQ RTE*T T KKGRQP L+ HQ+SQ *LCIHQ + HHV
Sbjct: 634 LVSKLML*LLMQPSLTGRTE*TPATSKKGRQPSHLEQEHQMSQKRH*LCIHQCMLEFHHV 455
Query: 193 L*LQHPELSMQKNRGRKGKILQDFSILCSSLLHNMS**GLFQRQKAGKLV* 41
L* Q P + +K+ GRK + DFS CSSLLH+M QRQKAG LV*
Sbjct: 454 L*YQRPAILTRKS*GRKVQNQLDFSSSCSSLLHSMQRSR*VQRQKAGILV* 302
Score = 103 bits (220), Expect = 1e-021
Identities = 55/107 (51%), Positives = 63/107 (58%)
Frame = +2 / +2
Query: 38 YSH*FTXXXXXXXXXXXHIMKQR*TQD*EILQDFPFSSSVLLH**FWMLQLKDMVGLVFS 217
+ H*+T H MKQR*T+ EI FSS L * W L LKDMV +
Sbjct: 299 FLH*YTSLLPLDSPASLHTMKQR*TRGREI*LVLHFSSLALSR*YCWTLVLKDMVEFQHT 478
Query: 218 LVYA*LAPYLGQLMLIVKAHWLATFL*CAQSSFSPSWRD*LHQGS*H 358
LVYA* P+LG LML+ K WLATFL*C +SSFSPS + LHQ *H
Sbjct: 479 LVYA*SVPFLGHLMLLFKVAWLATFL*CRRSSFSPSCQAWLHQEL*H 619
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 531,966,146
Number of Sequences: 636343
Number of extensions: 8310620
Number of successful extensions: 194640
Number of sequences better than 1.0e-020: 6
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 10450858509
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)