TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.063O07F020916.3.1
(657 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA726959.1|CA726959 wde1f.pk002.i6 wde1f Triticum aestiv... 215 1e-058
gb|CN011632.1|CN011632 WHE3886_E10_J20ZS Wheat Fusarium gra... 221 3e-058
gb|BE590753.1|BE590753 WHE0857_E09_J17ZS Wheat 20-45 DAP sp... 215 5e-055
gb|CA620221.1|CA620221 wl1n.pk0053.e8 wl1n Triticum aestivu... 104 8e-023
>gb|CA726959.1|CA726959 wde1f.pk002.i6 wde1f Triticum aestivum cDNA clone wde1f.pk002.i6 5'
end, mRNA sequence
Length = 623
Score = 215 bits (463), Expect(3) = 1e-058
Identities = 90/113 (79%), Positives = 100/113 (88%)
Frame = +2 / +1
Query: 287 EKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQGK 466
++YMG* WHFMGG EDDEPPSKRAR SSVESA+LP+ F +SK NPLG TMARPL SQGK
Sbjct: 208 KQYMG*LWHFMGGFEDDEPPSKRARASSVESANLPESFCYSKSINPLGGTMARPLASQGK 387
Query: 467 EVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFRE 625
EVMVGSKGVIK++EFVRIITK LY+LGYEKSGAVLEEESGI LH+P V LFR+
Sbjct: 388 EVMVGSKGVIKRDEFVRIITKALYTLGYEKSGAVLEEESGITLHSPSVNLFRK 546
Score = 211 bits (456), Expect(2) = 2e-054
Identities = 89/110 (80%), Positives = 94/110 (85%)
Frame = -1 / -1
Query: 621 LKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSFPWEGKGL 442
L FT G C +IPDSSSRTAPLFSYPR+YR VIILTNSS LITPLEPTITSFPWE KGL
Sbjct: 542 LNRFTDGECNVIPDSSSRTAPLFSYPRVYRAFVIILTNSSLLITPLEPTITSFPWEAKGL 363
Query: 441 AIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
AIV PKGL +FE +K SGK ADSTED LARFEGGSSSS+PPMKCQ QPIY
Sbjct: 362 AIVPPKGLMDFE*QKLSGKFADSTEDALARFEGGSSSSKPPMKCQSQPIY 213
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 69/112 (61%), Positives = 76/112 (67%)
Frame = -3 / -3
Query: 622 SEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFPLGRQRS 443
SE H M N *F L+N STFFISK+IQSF DYP+K FPLG QRS
Sbjct: 543 SE*IHRWRMQCNT*FFLKNSSTFFISKSIQSFCDYPHKFVPLNNTFRTNHNFFPLGSQRS 364
Query: 442 SHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
SHCTSQR+ FR ET W* C Y*GCSCAF*GW +IF+TSHEMP+SAHI F
Sbjct: 363 SHCTSQRVNGFRITETFW*IC*LY*GCSCAF*GWFIIFKTSHEMPKSAHILF 208
Score = 149 bits (320), Expect = 3e-035
Identities = 76/107 (71%), Positives = 78/107 (72%)
Frame = -2 / -2
Query: 611 SP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*LLSLGKAKV*PLY 432
SP * LI P E LHFFHIQ+YTE *LS QI PS**H NQP*LLS GK KV*PLY
Sbjct: 532 SPMENAM*YLILPQEQLHFFHIQEYTELL*LSSQIRPS**HL*NQP*LLSPGKPKV*PLY 353
Query: 431 FPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYI 291
PK IS RN LVNL LLRM LRVLRV HLQNLP*NAK+SPYI
Sbjct: 352 LPKG*WISNNRNFLVNLLTLLRMLLRVLRVVHHLQNLP*NAKVSPYI 212
Score = 144 bits (309), Expect(3) = 6e-042
Identities = 62/82 (75%), Positives = 68/82 (82%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGL LAFHGRF*R* TLKTRK+ILSR+ KFTR FL+FEI FG+YNG*TF FP ERS
Sbjct: 213 IYGLTLAFHGRF*R**TTLKTRKSILSRVSKFTRKFLLFEIH*PFGRYNG*TFGFPGERS 392
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGWF CY*EG IC DNH++SV
Sbjct: 393 YGWF*RCY*EGRICEDNHKSSV 458
Score = 116 bits (247), Expect = 3e-025
Identities = 46/60 (76%), Positives = 50/60 (83%)
Frame = +3 / +2
Query: 291 NIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGKK 470
NIWAD GISWEVLKM +HPQNAQEHPQ*+ Q+YQ VS RN LWEVQWLDL LP+GKK
Sbjct: 212 NIWADFGISWEVLKMMNHPQNAQEHPQ*SQQIYQKVSVIRNPLTLWEVQWLDLWLPRGKK 391
Score = 45.5 bits (93), Expect(3) = 6e-042
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSEN 626
G*S KLCI+LDMKKVE F R+NQ L I * +SE+
Sbjct: 437 G*SQKLCILLDMKKVELFLRKNQVLHCILHR*IYSES 547
Score = 26.3 bits (51), Expect(3) = 1e-058
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 119 PGRAIPWRFGADSGL 163
P +AIP R GADSG+
Sbjct: 74 PPQAIPQRLGADSGV 118
Score = 25.4 bits (49), Expect(3) = 1e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 633 LDGNWDNA 656
LDGNWDNA
Sbjct: 553 LDGNWDNA 576
Score = 23.5 bits (45), Expect(2) = 2e-054
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1 / -3
Query: 162 SPESAPNLQGIARPGGRIGWGKRPRGRGCVGRE 64
+PESAP GIA G + GRG RE
Sbjct: 117 TPESAPRRWGIACGGQEVDGWADWVGRGGKRRE 19
Score = 22.6 bits (43), Expect(2) = 2e-037
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 158 PNPRRISRESPA 123
PNPRR ESPA
Sbjct: 113 PNPRRDVGESPA 78
Score = 22.1 bits (42), Expect(3) = 6e-042
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 124 AGDSLEIRRGFG 159
AGDS RRGFG
Sbjct: 79 AGDSPTSRRGFG 114
>gb|CN011632.1|CN011632 WHE3886_E10_J20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_E10_J20,
mRNA sequence
Length = 649
Score = 221 bits (476), Expect(2) = 3e-058
Identities = 93/116 (80%), Positives = 103/116 (88%)
Frame = +2 / +1
Query: 287 EKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQGK 466
+KYMG* WHFMGG EDDEPPSKRAR SSVESA+LP+ F +SK NPLG TMARPL SQGK
Sbjct: 178 KKYMG*LWHFMGGFEDDEPPSKRARASSVESANLPENFCYSKSINPLGGTMARPLASQGK 357
Query: 467 EVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
EVMVGSKGVIK++EFVRIITK LY+LGYEKSGAVLEEESGI LH+P V LFR+QV+
Sbjct: 358 EVMVGSKGVIKRDEFVRIITKALYTLGYEKSGAVLEEESGITLHSPSVNLFRKQVL 525
Score = 219 bits (473), Expect(2) = 4e-058
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -1 / -3
Query: 630 TCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSFPWEG 451
TC L FT G C +IPDSSSRTAPLFSYPR+YR VIILTNSS LITPLEPTITSFPWE
Sbjct: 521 TCFLNRFTDGECNVIPDSSSRTAPLFSYPRVYRAFVIILTNSSLLITPLEPTITSFPWEA 342
Query: 450 KGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIYF 289
KGLAIV PKGL +FE +K SGK ADSTED LARFEGGSSSS+PPMKCQ QPIYF
Sbjct: 341 KGLAIVPPKGLMDFE*QKFSGKFADSTEDALARFEGGSSSSKPPMKCQSQPIYF 180
Score = 166 bits (358), Expect = 2e-040
Identities = 75/132 (56%), Positives = 84/132 (63%)
Frame = -3 / -2
Query: 631 HLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFPLGR 452
HL SE H R M N *F L+N STFFISK+IQSF DYP+K FPLG
Sbjct: 522 HLLSE*IHRRRMQCNT*FFLKNSSTFFISKSIQSFCDYPHKFVPLNNTFRTNHNFFPLGS 343
Query: 451 QRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFFTSGKV 272
QRSSHCTSQR+ FR E W* CR Y*GCSCAF*GW +IF+TSHEMP+SAHI F +
Sbjct: 342 QRSSHCTSQRVNGFRITEIFW*ICRLY*GCSCAF*GWFIIFKTSHEMPKSAHILFYYCRY 163
Query: 271 MVCNLHTNCCKQ 236
V N K+
Sbjct: 162 NVPQAAENAVKE 127
Score = 154 bits (330), Expect = 1e-036
Identities = 79/116 (68%), Positives = 82/116 (70%)
Frame = -2 / -1
Query: 635 QSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*LLSLG 456
Q+P * SP * LI P E LHFFHIQ+YTE *LS QI PS**H NQP*LLS G
Sbjct: 526 QAPAF*IDSPTENAM*YLILPQEQLHFFHIQEYTELL*LSSQIRPS**HL*NQP*LLSPG 347
Query: 455 KAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
K KV*PLY PK IS RN LVNL LLRM LRVLRV HLQNLP*NAK+SPY F
Sbjct: 346 KPKV*PLYLPKG*WISNNRNFLVNLPTLLRMLLRVLRVVHHLQNLP*NAKVSPYTF 179
Score = 145 bits (311), Expect(4) = 5e-046
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = +1 / +3
Query: 289 KIYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRER 468
K+YGL LAFHGRF*R* TLKTRK+ILSR+ KFTR FL+FEI FG+YNG*TF FP ER
Sbjct: 180 KVYGLTLAFHGRF*R**TTLKTRKSILSRVGKFTRKFLLFEIH*PFGRYNG*TFGFPGER 359
Query: 469 SYGWFQGCY*EGGIC*DNHQNSV 537
SYGWF CY*EG IC DNH++SV
Sbjct: 360 SYGWF*RCY*EGRICEDNHKSSV 428
Score = 115 bits (246), Expect = 5e-025
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K+IWAD GISWEVLKM +HPQNAQEHPQ*+ Q+YQ +S RN LWEVQWLDL LP+GK
Sbjct: 179 KSIWADFGISWEVLKMMNHPQNAQEHPQ*SRQIYQKISVIRNPLTLWEVQWLDLWLPRGK 358
Query: 468 K 470
K
Sbjct: 359 K 361
Score = 48.3 bits (99), Expect(4) = 5e-046
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR 629
G*S KLCI+LDMKKVE F R+NQ L I * +SE+R
Sbjct: 407 G*SQKLCILLDMKKVELFLRKNQVLHCILRR*IYSESR 520
Score = 26.3 bits (51), Expect(2) = 4e-058
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3 / -3
Query: 241 KQLPKQIEDSSAGSPDPR*FAEKPREEPRIR 149
++L K +S G DPR*FA E R R
Sbjct: 155 RRLQKMPSKNSVGCSDPR*FARGTPESARKR 63
Score = 25.8 bits (50), Expect(4) = 5e-046
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +1
Query: 612 NFSENR*LDGNWDNA 656
N + LDGNWDNA
Sbjct: 502 NLFRKQVLDGNWDNA 546
Score = 25.4 bits (49), Expect(2) = 3e-058
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 119 PGRAIPWRFGADSGL 163
P +AIP RF ADSG+
Sbjct: 43 PPQAIPQRFRADSGV 87
Score = 22.1 bits (42), Expect(4) = 5e-046
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 150 RIRGSSRGFSANQRGSGLPAE 212
R R S ANQRGS P E
Sbjct: 64 RFRADSGVPRANQRGSEQPTE 126
>gb|BE590753.1|BE590753 WHE0857_E09_J17ZS Wheat 20-45 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0857_E09_J17, mRNA sequence
Length = 548
Score = 215 bits (463), Expect = 5e-055
Identities = 91/113 (80%), Positives = 100/113 (88%)
Frame = +2 / +1
Query: 296 MG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQGKEVM 475
MG* WHFMGG EDDEPPSKRAR SSVESA+LP+ F +SK NPLG TMARPL SQGKEVM
Sbjct: 1 MG*LWHFMGGFEDDEPPSKRARASSVESANLPENFCYSKSINPLGGTMARPLASQGKEVM 180
Query: 476 VGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
VGSKGVIK++EFVRIITK LY+LGYEKSGAVLEEESGI LH+P V LFR+QV+
Sbjct: 181 VGSKGVIKRDEFVRIITKALYTLGYEKSGAVLEEESGITLHSPSVNLFRKQVL 339
Score = 211 bits (456), Expect = 5e-054
Identities = 89/111 (80%), Positives = 94/111 (84%)
Frame = -1 / -1
Query: 630 TCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSFPWEG 451
TC L FT G C +IPDSSSRTAPLFSYPR+YR VIILTNSS LITPLEPTITSFPWE
Sbjct: 335 TCFLNRFTDGECNVIPDSSSRTAPLFSYPRVYRAFVIILTNSSLLITPLEPTITSFPWEA 156
Query: 450 KGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQP 298
KGLAIV PKGL +FE +K SGK ADSTED LARFEGGSSSS+PPMKCQ QP
Sbjct: 155 KGLAIVPPKGLMDFE*QKFSGKFADSTEDALARFEGGSSSSKPPMKCQSQP 3
Score = 161 bits (347), Expect = 5e-039
Identities = 70/112 (62%), Positives = 77/112 (68%)
Frame = -3 / -3
Query: 631 HLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFPLGR 452
HL SE H R M N *F L+N STFFISK+IQSF DYP+K FPLG
Sbjct: 336 HLLSE*IHRRRMQCNT*FFLKNSSTFFISKSIQSFCDYPHKFVPLNNTFRTNHNFFPLGS 157
Query: 451 QRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAH 296
QRSSHCTSQR+ FR E W* CR Y*GCSCAF*GW +IF+TSHEMP+SAH
Sbjct: 156 QRSSHCTSQRVNGFRITEIFW*ICRLY*GCSCAF*GWFIIFKTSHEMPKSAH 1
Score = 148 bits (318), Expect = 5e-035
Identities = 77/113 (68%), Positives = 80/113 (70%)
Frame = -2 / -2
Query: 635 QSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*LLSLG 456
Q+P * SP * LI P E LHFFHIQ+YTE *LS QI PS**H NQP*LLS G
Sbjct: 340 QAPAF*IDSPTENAM*YLILPQEQLHFFHIQEYTELL*LSSQIRPS**HL*NQP*LLSPG 161
Query: 455 KAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISP 297
K KV*PLY PK IS RN LVNL LLRM LRVLRV HLQNLP*NAK+SP
Sbjct: 160 KPKV*PLYLPKG*WISNNRNFLVNLPTLLRMLLRVLRVVHHLQNLP*NAKVSP 2
Score = 138 bits (296), Expect(3) = 1e-042
Identities = 60/80 (75%), Positives = 66/80 (82%)
Frame = +1 / +3
Query: 298 GLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERSYG 477
GL LAFHGRF*R* TLKTRK+ILSR+ KFTR FL+FEI FG+YNG*TF FP ERSYG
Sbjct: 3 GLTLAFHGRF*R**TTLKTRKSILSRVGKFTRKFLLFEIH*PFGRYNG*TFGFPGERSYG 182
Query: 478 WFQGCY*EGGIC*DNHQNSV 537
WF CY*EG IC DNH++SV
Sbjct: 183 WF*RCY*EGRICEDNHKSSV 242
Score = 111 bits (236), Expect = 1e-023
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = +3 / +2
Query: 297 WADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGKK 470
WAD GISWEVLKM +HPQNAQEHPQ*+ Q+YQ +S RN LWEVQWLDL LP+GKK
Sbjct: 2 WADFGISWEVLKMMNHPQNAQEHPQ*SRQIYQKISVIRNPLTLWEVQWLDLWLPRGKK 175
Score = 48.3 bits (99), Expect(3) = 1e-042
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR 629
G*S KLCI+LDMKKVE F R+NQ L I * +SE+R
Sbjct: 221 G*SQKLCILLDMKKVELFLRKNQVLHCILRR*IYSESR 334
Score = 25.8 bits (50), Expect(3) = 1e-042
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +1
Query: 612 NFSENR*LDGNWDNA 656
N + LDGNWDNA
Sbjct: 316 NLFRKQVLDGNWDNA 360
>gb|CA620221.1|CA620221 wl1n.pk0053.e8 wl1n Triticum aestivum cDNA clone wl1n.pk0053.e8 5'
end, mRNA sequence
Length = 406
Score = 104 bits (222), Expect = 9e-022
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -1 / -1
Query: 213 LQPGVPIPADSPRNPERSPESAPNLQGIARPGGRIGWGKRPRGRGCVG 70
LQPGVPIPADSPRNPERSPESAPNLQGIARPGGRIGWGKR G G
Sbjct: 148 LQPGVPIPADSPRNPERSPESAPNLQGIARPGGRIGWGKRRGGEDA*G 5
Score = 103 bits (219), Expect = 2e-021
Identities = 41/43 (95%), Positives = 41/43 (95%)
Frame = +2 / +3
Query: 86 PLGRFPHPIRPPGRAIPWRFGADSGLLSGFLGESAGIGTPG*R 214
P RFPHPIRPPGRAIPWRFGADSGLLSGFLGESAGIGTPG*R
Sbjct: 21 PPRRFPHPIRPPGRAIPWRFGADSGLLSGFLGESAGIGTPG*R 149
Score = 100 bits (213), Expect(2) = 8e-023
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = -3 / -3
Query: 211 SAGSPDPR*FAEKPREEPRIRAESPGNRPPRRSDWVGKAPEG 86
SAGSPDPR*FAEKPREEPRIRAESPGNRPPRRSDWVGKA G
Sbjct: 146 SAGSPDPR*FAEKPREEPRIRAESPGNRPPRRSDWVGKASRG 21
Score = 96.8 bits (205), Expect(2) = 5e-022
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +1 / +2
Query: 88 PRALSPPNPTAGAGDSLEIRRGFGAPLGVSRRISGDRDSRLK 213
P LSPPNPTAGAGDSLEIRRGFGAPLGVSRRISGDRDSRLK
Sbjct: 23 PSTLSPPNPTAGAGDSLEIRRGFGAPLGVSRRISGDRDSRLK 148
Score = 28.1 bits (55), Expect(2) = 5e-022
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 67 PPYASSPPRALSPP 108
PPYASSPPR P
Sbjct: 3 PPYASSPPRRFPHP 44
Score = 27.2 bits (53), Expect(2) = 8e-023
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 103 GKAPEGERMRREG 65
G++ EGERMRREG
Sbjct: 39 GESVEGERMRREG 1
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 707,775,962
Number of Sequences: 636343
Number of extensions: 13029503
Number of successful extensions: 293432
Number of sequences better than 1.0e-020: 7
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14633393610
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)