TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS9h08.xg.2.1
(770 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR741686.1|DR741686 FGAS030736 Triticum aestivum FGAS: L... 102 7e-032
gb|DR741232.1|DR741232 FGAS001163 Triticum aestivum FGAS: L... 100 7e-032
gb|CV782447.1|CV782447 FGAS076860 Triticum aestivum FGAS: L... 102 7e-032
gb|BE445201.1|BE445201 WHE1133_G02_M03ZS Wheat etiolated se... 100 7e-032
gb|CA719588.1|CA719588 wkm2n.pk004.g19 wkm2n Triticum aesti... 100 7e-032
gb|BE445961.1|BE445961 WHE1148_H10_P20ZS Wheat etiolated se... 102 7e-032
gb|BQ839402.1|BQ839402 WHE4165_G01_N01ZS Wheat CS whole pla... 105 8e-030
gb|CV777397.1|CV777397 FGAS071803 Triticum aestivum FGAS: L... 105 1e-029
gb|CD870855.1|CD870855 AZO2.115M02F010117 AZO2 Triticum aes... 105 1e-029
gb|BJ247923.1|BJ247923 BJ247923 Y. Ogihara unpublished cDNA... 105 1e-029
gb|CK196770.1|CK196770 FGAS005232 Triticum aestivum FGAS: L... 108 5e-029
gb|AJ610965.1|AJ610965 AJ610965 Triticum turgidum subsp. du... 100 3e-028
gb|BE425652.1|BE425652 WHE0322_G08_G08ZS Wheat unstressed s... 108 9e-023
gb|AJ612241.1|AJ612241 AJ612241 Triticum turgidum subsp. du... 108 9e-023
gb|CD913318.1|CD913318 G550.117I05F010525 G550 Triticum aes... 106 3e-022
gb|CV774990.1|CV774990 FGAS069391 Triticum aestivum FGAS: L... 102 4e-021
gb|CV776875.1|CV776875 FGAS071279 Triticum aestivum FGAS: L... 102 4e-021
>gb|DR741686.1|DR741686 FGAS030736 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1067
Score = 102 bits (218), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 58/106 (54%)
Frame = +1 / +3
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE++ + +KAG YQ +++PFF+ +P + P L+P A SV VNDAI
Sbjct: 189 SLAEFFVREAQVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGHPKVLHPFASSVCVNDAI 368
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 369 WKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRRIHCGKYVA 506
Score = 55.6 bits (115), Expect(2) = 7e-032
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAY 294
LSL VRD L REED+IVF+LIERAK P N PAY
Sbjct: 66 LSLAAVRDQLIREEDSIVFALIERAKRPRNTPAY 167
>gb|DR741232.1|DR741232 FGAS001163 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1056
Score = 100 bits (213), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 57/106 (53%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE+E + +KAG YQ +++PFF+ +P + P L+P A V VNDAI
Sbjct: 236 SLAEFFVREAEVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGRPKVLHPFASLVCVNDAI 415
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 416 WKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRRIHCGKYVA 553
Score = 57.9 bits (120), Expect(2) = 7e-032
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG 318
L L VRD L REED+IVF+LIERAK P N PAY +AAG
Sbjct: 110 LRLAEVRDQLIREEDSIVFALIERAKRPRNTPAYSAAAAAAG 235
>gb|CV782447.1|CV782447 FGAS076860 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 102 bits (218), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 58/106 (54%)
Frame = +1 / +1
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE++ + +KAG YQ +++PFF+ +P + P L+P A SV VNDAI
Sbjct: 268 SLAEFFVREAQVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGHPKVLHPFASSVCVNDAI 447
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 448 WKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRRIHCGKYVA 585
Score = 55.6 bits (115), Expect(2) = 7e-032
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAY 294
LSL VRD L REED+IVF+LIERAK P N PAY
Sbjct: 145 LSLAAVRDQLIREEDSIVFALIERAKRPRNTPAY 246
>gb|BE445201.1|BE445201 WHE1133_G02_M03ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1133_G02_M03,
mRNA sequence
Length = 595
Score = 100 bits (213), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 57/106 (53%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE+E + +KAG YQ +++PFF+ +P + P L+P A V VNDAI
Sbjct: 152 SLAEFFVREAEVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGRPKVLHPFASLVCVNDAI 331
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 332 WKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRRIHCGKYVA 469
Score = 57.9 bits (120), Expect(2) = 7e-032
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG 318
L L VRD L REED+IVF+LIERAK P N PAY +AAG
Sbjct: 26 LRLAEVRDQLIREEDSIVFALIERAKRPRNTPAYSAAAAAAG 151
>gb|CA719588.1|CA719588 wkm2n.pk004.g19 wkm2n Triticum aestivum cDNA clone wkm2n.pk004.g19
5' end, mRNA sequence
Length = 480
Score = 100 bits (213), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 57/106 (53%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE+E + +KAG YQ +++PFF+ +P + P L+P A V VNDAI
Sbjct: 158 SLAEFFVREAEVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGRPKVLHPFASLVCVNDAI 337
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 338 WKMYFNELLPLFTADGDDGNYAETVALNFACLQALSRRIHCGKYVA 475
Score = 57.9 bits (120), Expect(2) = 7e-032
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYDPLHSAAG 318
L L VRD L REED+IVF+LIERAK P N PAY +AAG
Sbjct: 32 LRLAEVRDQLIREEDSIVFALIERAKRPRNTPAYSAAAAAAG 157
>gb|BE445961.1|BE445961 WHE1148_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1148_H10_P20,
mRNA sequence
Length = 467
Score = 102 bits (218), Expect(2) = 7e-032
Identities = 44/106 (41%), Positives = 58/106 (54%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S E F+RE++ + +KAG YQ +++PFF+ +P + P L+P A SV VNDAI
Sbjct: 149 SLAEFFVREAQVLHAKAGHYQKPEDVPFFSQDLPPPVFPTKGHPKVLHPFASSVCVNDAI 328
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYF+ELLP GDDGNYA S + YVA
Sbjct: 329 WKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRRIHCGKYVA 466
Score = 55.6 bits (115), Expect(2) = 7e-032
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAY 294
LSL VRD L REED+IVF+LIERAK P N PAY
Sbjct: 26 LSLAAVRDQLIREEDSIVFALIERAKRPRNTPAY 127
>gb|BQ839402.1|BQ839402 WHE4165_G01_N01ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_G01_N01, mRNA sequence
Length = 708
Score = 105 bits (225), Expect(2) = 8e-030
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +1 / +1
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 421 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 600
Query: 514 WSMYFDELLPRLXKXGDDGN 573
W MYFDE+LPRL K G DGN
Sbjct: 601 WKMYFDEVLPRLVKEGSDGN 660
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
L+LD+VR L R ED+I+F L+ERA+Y N YD
Sbjct: 283 LTLDSVRTSLIRLEDSIIFGLLERAQYCYNADTYD 387
>gb|CV777397.1|CV777397 FGAS071803 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 491 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 670
Query: 514 WSMYFDELLPRLXKXGDDGN 573
W MYFDE+LPRL K G DGN
Sbjct: 671 WKMYFDEVLPRLVKEGSDGN 730
Score = 45.1 bits (92), Expect(2) = 1e-029
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +2
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
L+LD++R L R ED+I+F L+ERA+Y N YD
Sbjct: 353 LTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYD 457
>gb|CD870855.1|CD870855 AZO2.115M02F010117 AZO2 Triticum aestivum cDNA clone AZO2115M02,
mRNA sequence
Length = 690
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +1 / +1
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 427 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 606
Query: 514 WSMYFDELLPRLXKXGDDGN 573
W MYFDE+LPRL K G DGN
Sbjct: 607 WKMYFDEVLPRLVKEGSDGN 666
Score = 45.1 bits (92), Expect(2) = 1e-029
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
L+LD++R L R ED+I+F L+ERA+Y N YD
Sbjct: 289 LTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYD 393
>gb|BJ247923.1|BJ247923 BJ247923 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4d22 5', mRNA sequence
Length = 630
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +1 / +3
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 342 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 521
Query: 514 WSMYFDELLPRLXKXGDDGN 573
W MYFDE+LPRL K G DGN
Sbjct: 522 WKMYFDEVLPRLVKEGSDGN 581
Score = 45.1 bits (92), Expect(2) = 1e-029
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
L+LD++R L R ED+I+F L+ERA+Y N YD
Sbjct: 204 LTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYD 308
>gb|CK196770.1|CK196770 FGAS005232 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 108 bits (230), Expect(2) = 5e-029
Identities = 45/106 (42%), Positives = 59/106 (55%)
Frame = +1 / +1
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 238 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 417
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYFDE+LPRL K G DGN S +Y +VA
Sbjct: 418 WKMYFDEVLPRLVKEGSDGNSGSSALCDTTCLQALSKRIHYGKFVA 555
Score = 40.5 bits (82), Expect(2) = 5e-029
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1 / +1
Query: 139 LCTMVVVLTGLVSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
+CT TG P + +R L R ED+I+F L+ERA+Y N YD
Sbjct: 46 VCTKKQAGTGPEFPGYRRPTRAVIRTSLIRLEDSIIFGLLERAQYCYNADTYD 204
>gb|AJ610965.1|AJ610965 AJ610965 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04126R, mRNA
sequence
Length = 700
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +1 / +3
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 465 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 644
Query: 514 WSMYFDELLPRLXKXGDD 567
W MYFDE+LPRL K G D
Sbjct: 645 WKMYFDEVLPRLVKEGSD 698
Score = 45.5 bits (93), Expect(2) = 3e-028
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 193 LSLDTVRDFLTREEDTIVFSLIERAKYPLNRPAYD 297
L+LD+VR L R ED+I+F L+ERA+Y N YD
Sbjct: 327 LTLDSVRTSLIRLEDSIIFGLLERAQYCYNADTYD 431
>gb|BE425652.1|BE425652 WHE0322_G08_G08ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0322_G08_G08, mRNA
sequence
Length = 433
Score = 108 bits (230), Expect = 9e-023
Identities = 45/106 (42%), Positives = 59/106 (55%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 65 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 244
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYFDE+LPRL K G DGN S +Y +VA
Sbjct: 245 WKMYFDEVLPRLVKEGSDGNSGSSALCDTTCLQALSKRIHYGKFVA 382
>gb|AJ612241.1|AJ612241 AJ612241 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06436R, mRNA
sequence
Length = 680
Score = 108 bits (230), Expect = 9e-023
Identities = 45/106 (42%), Positives = 59/106 (55%)
Frame = +1 / +1
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 85 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 264
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYFDE+LPRL K G DGN S +Y +VA
Sbjct: 265 WKMYFDEVLPRLVKEGSDGNSGSSALCDTTCLQALSKRIHYGKFVA 402
>gb|CD913318.1|CD913318 G550.117I05F010525 G550 Triticum aestivum cDNA clone G550117I05,
mRNA sequence
Length = 538
Score = 106 bits (226), Expect = 3e-022
Identities = 45/106 (42%), Positives = 58/106 (54%)
Frame = +1 / +2
Query: 334 SFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFTSDLYPAAXSVNVNDAI 513
S VE +RE+E + +K GRY+S E PFF +P L PP + + L+P A S+N+N I
Sbjct: 74 SLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEI 253
Query: 514 WSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXXXNYXXYVA 651
W MYFDE+LPRL K G DGN S +Y VA
Sbjct: 254 WKMYFDEVLPRLVKEGSDGNSGSSALCDTTCLQALSKRIHYGKLVA 391
>gb|CV774990.1|CV774990 FGAS069391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 102 bits (218), Expect = 4e-021
Identities = 48/128 (37%), Positives = 64/128 (50%)
Frame = +1 / +1
Query: 268 KYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALA 447
++P R P S + S E F+RE+E + +KAG YQ +++PFF+ +P +
Sbjct: 76 EFPGYRRPTRPTSSRSRAAAAGSLAEFFVREAEVLHAKAGHYQKPEDVPFFSQDLPPPVF 255
Query: 448 PPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXX 627
P L+P A V VNDAIW MYF+ELLP GDDGNYA S
Sbjct: 256 PTKGRPKVLHPFASLVCVNDAIWKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRR 435
Query: 628 XNYXXYVA 651
+ YVA
Sbjct: 436 IHCGKYVA 459
>gb|CV776875.1|CV776875 FGAS071279 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 102 bits (218), Expect = 4e-021
Identities = 48/128 (37%), Positives = 64/128 (50%)
Frame = +1 / +1
Query: 268 KYPLNRPAYDPLHSAAGRRLNASFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALA 447
++P R P S + S E F+RE+E + +KAG YQ +++PFF+ +P +
Sbjct: 76 EFPGYRRPTRPTSSRSRAAAAGSLAEFFVREAEVLHAKAGHYQKPEDVPFFSQDLPPPVF 255
Query: 448 PPYNFTSDLYPAAXSVNVNDAIWSMYFDELLPRLXKXGDDGNYAVXXXXXXXXXXXXSXX 627
P L+P A V VNDAIW MYF+ELLP GDDGNYA S
Sbjct: 256 PTKGRPKVLHPFASLVCVNDAIWKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRR 435
Query: 628 XNYXXYVA 651
+ YVA
Sbjct: 436 IHCGKYVA 459
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 557,652,373
Number of Sequences: 636343
Number of extensions: 8396570
Number of successful extensions: 139997
Number of sequences better than 1.0e-020: 22
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 18003508502
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)