TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.1
(393 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE500722.1|BE500722 WHE0991-0994_G03_G03ZS Wheat pre-ant... 144 3e-034
gb|BG263743.1|BG263743 WHE2348_E03_J06ZS Wheat pre-anthesis... 143 9e-034
gb|BJ245498.1|BJ245498 BJ245498 Y. Ogihara unpublished cDNA... 143 1e-033
gb|BJ251381.1|BJ251381 BJ251381 Y. Ogihara unpublished cDNA... 143 1e-033
gb|BJ247645.1|BJ247645 BJ247645 Y. Ogihara unpublished cDNA... 140 6e-033
gb|BJ243839.1|BJ243839 BJ243839 Y. Ogihara unpublished cDNA... 131 5e-030
gb|BJ248972.1|BJ248972 BJ248972 Y. Ogihara unpublished cDNA... 129 1e-029
gb|CA741431.1|CA741431 wia1c.pk002.f17 wia1c Triticum aesti... 129 1e-029
gb|BJ258356.1|BJ258356 BJ258356 Y. Ogihara unpublished cDNA... 128 3e-029
gb|BE500862.1|BE500862 WHE0991-0994_L10_L10ZS Wheat pre-ant... 81 1e-025
gb|BE499235.1|BE499235 WHE0972_G04_M08ZS Wheat pre-anthesis... 114 6e-025
gb|BF482309.1|BF482309 WHE1797_B12_D23ZS Wheat pre-anthesis... 114 6e-025
gb|BF482590.1|BF482590 WHE2301-2304_G20_G20ZS Wheat pre-ant... 114 6e-025
gb|BJ243425.1|BJ243425 BJ243425 Y. Ogihara unpublished cDNA... 114 6e-025
gb|CA594449.1|CA594449 wpa1c.pk007.k12 wpa1c Triticum aesti... 114 6e-025
gb|CA595523.1|CA595523 wpa1c.pk010.g10 wpa1c Triticum aesti... 114 6e-025
gb|CN013186.1|CN013186 WHE3957_G05_N09ZS Wheat Fusarium gra... 114 6e-025
gb|BQ904979.1|BQ904979 Ta04_13i05_R Ta04_AAFC_ECORC_Fusariu... 109 1e-023
gb|BI750799.1|BI750799 Ta01_02d02_R Ta01_AAFC_ECORC_Fusariu... 81 2e-022
gb|BJ253745.1|BJ253745 BJ253745 Y. Ogihara unpublished cDNA... 102 2e-021
>gb|BE500722.1|BE500722 WHE0991-0994_G03_G03ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_G03_G03, mRNA
sequence
Length = 495
Score = 144 bits (310), Expect = 3e-034
Identities = 61/108 (56%), Positives = 64/108 (59%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC+ C+K HFIDLLT IYHKT HCKG SM YSSMD LYCKT
Sbjct: 70 MSFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 249
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK FTP L+R PSK S QD A
Sbjct: 250 HFEQLFKETGSFSKKFTPGNRSGDKNELSRAPSKLSAAFSGTQDKCAA 393
Score = 104 bits (222), Expect = 5e-022
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / -2
Query: 391 AXXLSWXXEXXXXXLLGXLVSXXLXDXXXXGVKFLEKLPVXLKSCXKWVLQYXXXSMEE* 212
A LS E LLG L S L GV F EKLPV LKSC K VLQ SMEE*
Sbjct: 392 AAHLS*VPEKAAESLLGALDSSFLSPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE* 213
Query: 211 XXIEXXPLQWXXXXXVLW*XXXXXVRRSMKXXXLSXXVHLXXXPVKDMV 65
IE PLQW VLW* VRRSMK S HL PVKDM+
Sbjct: 212 LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAEHLSCVPVKDML 66
>gb|BG263743.1|BG263743 WHE2348_E03_J06ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2348_E03_J06, mRNA sequence
Length = 542
Score = 143 bits (307), Expect = 9e-034
Identities = 61/108 (56%), Positives = 63/108 (58%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K HFIDLLT IYHKT HCKG SM YSSMD LYCKT
Sbjct: 71 MSFTGTQDKCFACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 250
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK FTP L+R PSK S QD A
Sbjct: 251 HFEQLFKETGSFSKKFTPGNKSGDKNELSRAPSKLSAAFSGTQDKCAA 394
Score = 104 bits (222), Expect = 5e-022
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / -3
Query: 391 AXXLSWXXEXXXXXLLGXLVSXXLXDXXXXGVKFLEKLPVXLKSCXKWVLQYXXXSMEE* 212
A LS E LLG L S L GV F EKLPV LKSC K VLQ SMEE*
Sbjct: 393 AAHLS*VPEKAADSLLGALDSSFLSPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE* 214
Query: 211 XXIEXXPLQWXXXXXVLW*XXXXXVRRSMKXXXLSXXVHLXXXPVKDMV 65
IE PLQW VLW* VRRSMK S HL PVKDM+
Sbjct: 213 LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAKHLSCVPVKDML 67
>gb|BJ245498.1|BJ245498 BJ245498 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19o10 5', mRNA sequence
Length = 622
Score = 143 bits (306), Expect = 1e-033
Identities = 61/108 (56%), Positives = 63/108 (58%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K HFIDLLT IYHKT HCKG SM YSSMD LYCKT
Sbjct: 67 MSFTGTQDKCFACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 246
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK FTP L+R PSK S QD A
Sbjct: 247 HFEQLFKETGSFSKKFTPGNKSGDKNELSRVPSKLSAAFSGTQDKCAA 390
Score = 104 bits (222), Expect = 5e-022
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / -3
Query: 391 AXXLSWXXEXXXXXLLGXLVSXXLXDXXXXGVKFLEKLPVXLKSCXKWVLQYXXXSMEE* 212
A LS E LLG L S L GV F EKLPV LKSC K VLQ SMEE*
Sbjct: 389 AAHLS*VPEKAADSLLGTLDSSFLSPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE* 210
Query: 211 XXIEXXPLQWXXXXXVLW*XXXXXVRRSMKXXXLSXXVHLXXXPVKDMV 65
IE PLQW VLW* VRRSMK S HL PVKDM+
Sbjct: 209 LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAKHLSCVPVKDML 63
>gb|BJ251381.1|BJ251381 BJ251381 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19o10 3', mRNA sequence
Length = 656
Score = 143 bits (306), Expect = 1e-033
Identities = 61/108 (56%), Positives = 63/108 (58%)
Frame = +3 / -1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC C+K HFIDLLT IYHKT HCKG SM YSSMD LYCKT
Sbjct: 590 MSFTGTQDKCFACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 411
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK FTP L+R PSK S QD A
Sbjct: 410 HFEQLFKETGSFSKKFTPGNKSGDKNELSRVPSKLSAAFSGTQDKCAA 267
Score = 104 bits (222), Expect = 5e-022
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / +1
Query: 391 AXXLSWXXEXXXXXLLGXLVSXXLXDXXXXGVKFLEKLPVXLKSCXKWVLQYXXXSMEE* 212
A LS E LLG L S L GV F EKLPV LKSC K VLQ SMEE*
Sbjct: 268 AAHLS*VPEKAADSLLGTLDSSFLSPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE* 447
Query: 211 XXIEXXPLQWXXXXXVLW*XXXXXVRRSMKXXXLSXXVHLXXXPVKDMV 65
IE PLQW VLW* VRRSMK S HL PVKDM+
Sbjct: 448 LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAKHLSCVPVKDML 594
>gb|BJ247645.1|BJ247645 BJ247645 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3c02 5', mRNA sequence
Length = 610
Score = 140 bits (301), Expect = 6e-033
Identities = 60/108 (55%), Positives = 62/108 (57%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MS TG KC C+K HFIDLLT IYHKT HCKG SM YSSMD LYCKT
Sbjct: 50 MSLTGTQDKCFACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 229
Query: 249 HFXQLFKXTGSFSKNFTPXXXXSXXXXLTRXPSKXXXXXSXXQDXXXA 392
HF QLFK TGSFSK FTP L+R PSK S QD A
Sbjct: 230 HFEQLFKETGSFSKKFTPGNKSGDKNELSRAPSKLSAAFSGTQDKCAA 373
Score = 104 bits (222), Expect = 5e-022
Identities = 55/109 (50%), Positives = 56/109 (51%)
Frame = -3 / -2
Query: 391 AXXLSWXXEXXXXXLLGXLVSXXLXDXXXXGVKFLEKLPVXLKSCXKWVLQYXXXSMEE* 212
A LS E LLG L S L GV F EKLPV LKSC K VLQ SMEE*
Sbjct: 372 AAHLS*VPEKAADSLLGALDSSFLSPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE* 193
Query: 211 XXIEXXPLQWXXXXXVLW*XXXXXVRRSMKXXXLSXXVHLXXXPVKDMV 65
IE PLQW VLW* VRRSMK S HL PVKDM+
Sbjct: 192 LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAKHLSCVPVKDML 46
>gb|BJ243839.1|BJ243839 BJ243839 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13b10 5', mRNA sequence
Length = 655
Score = 131 bits (280), Expect = 5e-030
Identities = 53/81 (65%), Positives = 54/81 (66%)
Frame = +3 / +2
Query: 60 PGTMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLY 239
P MSFTG KC CDK HFIDLLT YHKT HCKG SM YSSMD LY
Sbjct: 38 PIAMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLY 217
Query: 240 CKTHFXQLFKXTGSFSKNFTP 302
CKTHF QLFK TG+FSKNFTP
Sbjct: 218 CKTHFEQLFKETGNFSKNFTP 280
Score = 104 bits (221), Expect = 6e-022
Identities = 48/81 (59%), Positives = 49/81 (60%)
Frame = -3 / -2
Query: 301 GVKFLEKLPVXLKSCXKWVLQYXXXSMEE*XXIEXXPLQWXXXXXVLW*XXXXXVRRSMK 122
GVKF EK PV LKSC KWVLQ SMEE* IE PLQW VLW* VRRSMK
Sbjct: 279 GVKFFEKFPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLHLKHVLW*ETPSAVRRSMK 100
Query: 121 XXXLSXXVHLXXXPVKDMVPG 59
LS +HL PVKDM G
Sbjct: 99 WTVLSHVLHLSCVPVKDMAIG 37
>gb|BJ248972.1|BJ248972 BJ248972 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8n13 5', mRNA sequence
Length = 663
Score = 129 bits (277), Expect = 1e-029
Identities = 52/78 (66%), Positives = 53/78 (67%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK HFIDLLT YHKT HCKG SM YSSMD LYCKT
Sbjct: 68 MSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 247
Query: 249 HFXQLFKXTGSFSKNFTP 302
HF QLFK TG+FSKNFTP
Sbjct: 248 HFEQLFKETGNFSKNFTP 301
Score = 104 bits (222), Expect = 5e-022
Identities = 48/78 (61%), Positives = 49/78 (62%)
Frame = -3 / -1
Query: 301 GVKFLEKLPVXLKSCXKWVLQYXXXSMEE*XXIEXXPLQWXXXXXVLW*XXXXXVRRSMK 122
GVKF EKLPV LKSC KWVLQ SMEE* IE PLQW VLW* VRRSMK
Sbjct: 300 GVKFFEKLPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLHLKHVLW*ETPSAVRRSMK 121
Query: 121 XXXLSXXVHLXXXPVKDM 68
LS +HL PVKDM
Sbjct: 120 WTVLSHVLHLSCVPVKDM 67
>gb|CA741431.1|CA741431 wia1c.pk002.f17 wia1c Triticum aestivum cDNA clone wia1c.pk002.f17
5' end, mRNA sequence
Length = 629
Score = 129 bits (277), Expect = 1e-029
Identities = 52/78 (66%), Positives = 53/78 (67%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
MSFTG KC CDK HFIDLLT YHKT HCKG SM YSSMD LYCKT
Sbjct: 61 MSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 240
Query: 249 HFXQLFKXTGSFSKNFTP 302
HF QLFK TG+FSKNFTP
Sbjct: 241 HFEQLFKETGNFSKNFTP 294
Score = 104 bits (222), Expect = 5e-022
Identities = 48/78 (61%), Positives = 49/78 (62%)
Frame = -3 / -1
Query: 301 GVKFLEKLPVXLKSCXKWVLQYXXXSMEE*XXIEXXPLQWXXXXXVLW*XXXXXVRRSMK 122
GVKF EKLPV LKSC KWVLQ SMEE* IE PLQW VLW* VRRSMK
Sbjct: 293 GVKFFEKLPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLHLKHVLW*ETPSAVRRSMK 114
Query: 121 XXXLSXXVHLXXXPVKDM 68
LS +HL PVKDM
Sbjct: 113 WTVLSHVLHLSCVPVKDM 60
>gb|BJ258356.1|BJ258356 BJ258356 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7c24 5', mRNA sequence
Length = 622
Score = 128 bits (274), Expect = 3e-029
Identities = 52/81 (64%), Positives = 53/81 (65%)
Frame = +3 / +3
Query: 60 PGTMSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLY 239
P MSFTG KC CDK HFIDLLT YHKT HC G SM YSSMD LY
Sbjct: 114 PIAMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCXGTLSMCNYSSMDGVLY 293
Query: 240 CKTHFXQLFKXTGSFSKNFTP 302
CKTHF QLFK TG+FSKNFTP
Sbjct: 294 CKTHFEQLFKETGNFSKNFTP 356
Score = 101 bits (216), Expect = 3e-021
Identities = 47/81 (58%), Positives = 48/81 (59%)
Frame = -3 / -1
Query: 301 GVKFLEKLPVXLKSCXKWVLQYXXXSMEE*XXIEXXPLQWXXXXXVLW*XXXXXVRRSMK 122
GVKF EK PV LKSC KWVLQ SMEE* IE P QW VLW* VRRSMK
Sbjct: 355 GVKFFEKFPVSLKSCSKWVLQ*RTPSMEE*LHIERVPXQWLHLKHVLW*ETPSAVRRSMK 176
Query: 121 XXXLSXXVHLXXXPVKDMVPG 59
LS +HL PVKDM G
Sbjct: 175 WTVLSHVLHLSCVPVKDMAIG 113
>gb|BE500862.1|BE500862 WHE0991-0994_L10_L10ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_L10_L10, mRNA
sequence
Length = 457
Score = 80.8 bits (170), Expect(2) = 1e-025
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 183 HCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNFTP 302
HCKG SM YSSMD LYCKTHF QLFK TG+FSKNFTP
Sbjct: 213 HCKGTLSMCNYSSMDGVLYCKTHFEQLFKETGNFSKNFTP 332
Score = 54.7 bits (113), Expect(2) = 1e-025
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKT 167
MSFTG KC CDK HFIDLLT YHKT
Sbjct: 98 MSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKT 196
>gb|BE499235.1|BE499235 WHE0972_G04_M08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0972_G04_M08, mRNA sequence
Length = 544
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 95 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 274
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 275 HFEQLFKETGSFKKNF 322
>gb|BF482309.1|BF482309 WHE1797_B12_D23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1797_B12_D23, mRNA sequence
Length = 574
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 94 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 273
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 274 HFEQLFKETGSFKKNF 321
>gb|BF482590.1|BF482590 WHE2301-2304_G20_G20ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE2301-2304_G20_G20, mRNA
sequence
Length = 419
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 119 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 298
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 299 HFEQLFKETGSFKKNF 346
>gb|BJ243425.1|BJ243425 BJ243425 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11b19 5', mRNA sequence
Length = 508
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +3
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 105 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 284
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 285 HFEQLFKETGSFKKNF 332
>gb|CA594449.1|CA594449 wpa1c.pk007.k12 wpa1c Triticum aestivum cDNA clone wpa1c.pk007.k12
5' end, mRNA sequence
Length = 533
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +2
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 134 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 313
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 314 HFEQLFKETGSFKKNF 361
>gb|CA595523.1|CA595523 wpa1c.pk010.g10 wpa1c Triticum aestivum cDNA clone wpa1c.pk010.g10
5' end, mRNA sequence
Length = 604
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 139 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 318
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 319 HFEQLFKETGSFKKNF 366
>gb|CN013186.1|CN013186 WHE3957_G05_N09ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3957_G05_N09,
mRNA sequence
Length = 668
Score = 114 bits (243), Expect = 6e-025
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKT 248
M+F G KC CDK HFIDLLT YHK HCKG SM YSSMD L+CKT
Sbjct: 112 MTFYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVLFCKT 291
Query: 249 HFXQLFKXTGSFSKNF 296
HF QLFK TGSF KNF
Sbjct: 292 HFEQLFKETGSFKKNF 339
>gb|BQ904979.1|BQ904979 Ta04_13i05_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_13i05, mRNA
sequence
Length = 498
Score = 109 bits (233), Expect = 1e-023
Identities = 44/74 (59%), Positives = 45/74 (60%)
Frame = +3 / -3
Query: 75 FTGXXXKCTXCDKXXHFIDLLTXXXXIYHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHF 254
F G KC CDK HFIDLLT YHK HCKG SM YSSMD +CKTHF
Sbjct: 328 FYGTQDKCKACDKTVHFIDLLTADGIPYHKYCFKCSHCKGTLSMCSYSSMDGVFFCKTHF 149
Query: 255 XQLFKXTGSFSKNF 296
QLFK TGSF KNF
Sbjct: 148 EQLFKETGSFKKNF 107
>gb|BI750799.1|BI750799 Ta01_02d02_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_02d02, mRNA
sequence
Length = 434
Score = 81.3 bits (171), Expect(2) = 2e-022
Identities = 32/49 (65%), Positives = 33/49 (67%)
Frame = +3 / -3
Query: 156 YHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNFTP 302
YHKT HCK SM YSSMD YCKTHF QLFK TG+FSK FTP
Sbjct: 249 YHKTCFKCSHCKXTLSMCNYSSMDGVFYCKTHFEQLFKETGNFSKXFTP 103
Score = 42.8 bits (87), Expect(2) = 2e-022
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 69 MSFTGXXXKCTXCDKXXHFIDLLT 140
M FTG KC CDK HFIDLLT
Sbjct: 335 MFFTGTQDKCKTCDKTVHFIDLLT 264
>gb|BJ253745.1|BJ253745 BJ253745 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3c02 3', mRNA sequence
Length = 693
Score = 102 bits (218), Expect = 2e-021
Identities = 44/79 (55%), Positives = 45/79 (56%)
Frame = +3 / -3
Query: 156 YHKTXXXXXHCKGXXSMXXYSSMDXXLYCKTHFXQLFKXTGSFSKNFTPXXXXSXXXXLT 335
YHKT HCKG SM YSSMD LYCKTHF QLFK TGSFSK FTP L+
Sbjct: 691 YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKKFTPGNKSGDKNELS 512
Query: 336 RXPSKXXXXXSXXQDXXXA 392
R PSK S QD A
Sbjct: 511 RAPSKLSAAFSGTQDKCAA 455
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 235,316,663
Number of Sequences: 636343
Number of extensions: 2327581
Number of successful extensions: 158365
Number of sequences better than 1.0e-020: 29
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 7106833680
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)