TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ4d09.yg.2.1
(542 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ281794.1|BJ281794 BJ281794 Y. Ogihara unpublished cDNA... 217 6e-056
gb|CK210746.1|CK210746 FGAS022573 Triticum aestivum FGAS: L... 217 6e-056
gb|BQ241244.1|BQ241244 TaE05007E07R TaE05 Triticum aestivum... 217 9e-056
gb|CD889881.1|CD889881 G118.113F10F010716 G118 Triticum aes... 210 7e-054
gb|CK195884.1|CK195884 FGAS004330 Triticum aestivum FGAS: L... 204 5e-052
gb|CV760955.1|CV760955 FGAS055342 Triticum aestivum FGAS: L... 200 1e-050
gb|BJ235147.1|BJ235147 BJ235147 Y. Ogihara unpublished cDNA... 195 4e-049
gb|CD868098.1|CD868098 AZO2.108A10F001113 AZO2 Triticum aes... 193 1e-048
gb|BU099391.1|BU099391 WHE3306_H05_O10ZS Chinese Spring whe... 185 4e-046
gb|CD930086.1|CD930086 GR45.110B22F010418 GR45 Triticum aes... 155 4e-037
gb|CA593225.1|CA593225 wpa1c.pk003.n16 wpa1c Triticum aesti... 84 6e-037
gb|CN009221.1|CN009221 WHE3856_C04_E08ZS Wheat Fusarium gra... 91 2e-036
gb|BM136936.1|BM136936 WHE0467-0470_K17_K17ZS Wheat Fusariu... 151 5e-036
gb|BI479667.1|BI479667 WHE3456_F05_K10ZS Wheat pre-anthesis... 151 6e-036
gb|CA718756.1|CA718756 wkm2n.pk002.h17 wkm2n Triticum aesti... 136 2e-031
gb|BU100162.1|BU100162 WHE3315_H06_P11ZS Chinese Spring whe... 126 2e-028
gb|CK210291.1|CK210291 FGAS022092 Triticum aestivum FGAS: L... 124 6e-028
gb|CF132947.1|CF132947 WHE4352_C01_E02ZT Wheat meiotic flor... 124 9e-028
gb|CK198626.1|CK198626 FGAS007113 Triticum aestivum FGAS: L... 123 1e-027
gb|BF293133.1|BF293133 WHE2164_A01_A02ZS Triticum turgidum ... 118 4e-026
gb|BJ305214.1|BJ305214 BJ305214 Y. Ogihara unpublished cDNA... 118 4e-026
gb|CK161874.1|CK161874 FGAS014450 Triticum aestivum FGAS: L... 118 4e-026
gb|BJ212102.1|BJ212102 BJ212102 Y. Ogihara unpublished cDNA... 117 7e-026
gb|CV771662.1|CV771662 FGAS066055 Triticum aestivum FGAS: L... 117 7e-026
gb|CV760179.1|CV760179 FGAS054563 Triticum aestivum FGAS: L... 116 1e-025
gb|CK163391.1|CK163391 FGAS016017 Triticum aestivum FGAS: L... 107 8e-023
gb|DR734183.1|DR734183 FGAS079939 Triticum aestivum FGAS: L... 105 3e-022
gb|CD877208.1|CD877208 AZO4.002G11F010503 AZO4 Triticum aes... 104 1e-021
gb|CV770920.1|CV770920 FGAS065313 Triticum aestivum FGAS: L... 103 2e-021
gb|AL828006.1|AL828006 AL828006 p:739 Triticum aestivum cDN... 100 7e-021
gb|CA733579.1|CA733579 wlp1c.pk008.j6 wlp1c Triticum aestiv... 100 9e-021
>gb|BJ281794.1|BJ281794 BJ281794 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23m05 5', mRNA sequence
Length = 637
Score = 217 bits (469), Expect = 6e-056
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +1 / +2
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+VA +VM PFAL+FE+ TRPK
Sbjct: 170 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLVATLVMLPFALFFEKGTRPK 349
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M+L +FIKIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++
Sbjct: 350 MTLRIFIKILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLR 529
Query: 427 IXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
+ SQA GT TV +LMI+ ++
Sbjct: 530 LRSSHSQAKVAGTICTVIGAVLMIMYHGPVV 622
Score = 101 bits (215), Expect = 7e-021
Identities = 57/144 (39%), Positives = 67/144 (46%)
Frame = -1 / -2
Query: 497 IISKXXXTVXAVPXXXAWXXXXXXXXXXXXSMMAFTKVRAGNMLVNAEEKLADVLFTPM* 318
IIS TV VP AW MA KV AG ML +A+EKLA+V P *
Sbjct: 600 IISTAPMTVQMVPATLAWLWELRSRSFSIRRTMAMMKVTAGRMLTSADEKLAEVSLLPT* 421
Query: 317 MKFWSSTGSSNPKARILMNTGRLILGLVFLSNHSANGXXXXXXXXXXXXXXX*WLIPCRR 138
+FWSSTGSS+ +ILM +ILG V S A G *WL+P
Sbjct: 420 YRFWSSTGSSSASPKILMKMRSVILGRVPFSKKRAKGSMTSVATRLR*VTRT*WLMPRLS 241
Query: 137 DATEMRNIPAKPN*RNTMAM*GIT 66
+ATE IPA P + M G T
Sbjct: 240 EATETMYIPAYPICSRIIIMYGFT 169
>gb|CK210746.1|CK210746 FGAS022573 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1121
Score = 217 bits (469), Expect = 6e-056
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +1 / +2
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+VA +VM PFAL+FE+ TRPK
Sbjct: 215 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLVATLVMLPFALFFEKGTRPK 394
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M+L +FIKIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++
Sbjct: 395 MTLRIFIKILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLR 574
Query: 427 IXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
+ SQA GT TV +LMI+ ++
Sbjct: 575 LRSSHSQAKVAGTICTVIGAVLMIMYHGPVV 667
Score = 101 bits (215), Expect = 7e-021
Identities = 57/144 (39%), Positives = 67/144 (46%)
Frame = -1 / -3
Query: 497 IISKXXXTVXAVPXXXAWXXXXXXXXXXXXSMMAFTKVRAGNMLVNAEEKLADVLFTPM* 318
IIS TV VP AW MA KV AG ML +A+EKLA+V P *
Sbjct: 645 IISTAPMTVQMVPATLAWLWELRSRSFSIRRTMAMMKVTAGRMLTSADEKLAEVSLLPT* 466
Query: 317 MKFWSSTGSSNPKARILMNTGRLILGLVFLSNHSANGXXXXXXXXXXXXXXX*WLIPCRR 138
+FWSSTGSS+ +ILM +ILG V S A G *WL+P
Sbjct: 465 YRFWSSTGSSSASPKILMKMRSVILGRVPFSKKRAKGSMTSVATRLR*VTRT*WLMPRLS 286
Query: 137 DATEMRNIPAKPN*RNTMAM*GIT 66
+ATE IPA P + M G T
Sbjct: 285 EATETMYIPAYPICSRIIIMYGFT 214
>gb|BQ241244.1|BQ241244 TaE05007E07R TaE05 Triticum aestivum cDNA clone TaE05007E07R, mRNA
sequence
Length = 636
Score = 217 bits (468), Expect = 9e-056
Identities = 92/145 (63%), Positives = 114/145 (78%)
Frame = +1 / +1
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+VA +VM PFAL+FE+ TRPK
Sbjct: 196 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLVATLVMLPFALFFEKGTRPK 375
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M+L +FIKIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++
Sbjct: 376 MTLRIFIKILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLR 555
Query: 427 IXXRRSQAXXXGTAXTVXXXLLMIL 501
+ SQA GT TV +LMI+
Sbjct: 556 LRSSHSQAKVAGTICTVIGAVLMIM 630
Score = 101 bits (215), Expect = 7e-021
Identities = 57/144 (39%), Positives = 67/144 (46%)
Frame = -1 / -2
Query: 497 IISKXXXTVXAVPXXXAWXXXXXXXXXXXXSMMAFTKVRAGNMLVNAEEKLADVLFTPM* 318
IIS TV VP AW MA KV AG ML +A+EKLA+V P *
Sbjct: 626 IISTAPMTVQMVPATLAWLWELRSRSFSIRRTMAMMKVTAGRMLTSADEKLAEVSLLPT* 447
Query: 317 MKFWSSTGSSNPKARILMNTGRLILGLVFLSNHSANGXXXXXXXXXXXXXXX*WLIPCRR 138
+FWSSTGSS+ +ILM +ILG V S A G *WL+P
Sbjct: 446 YRFWSSTGSSSASPKILMKMRSVILGRVPFSKKRAKGSMTSVATRLR*VTRT*WLMPRLS 267
Query: 137 DATEMRNIPAKPN*RNTMAM*GIT 66
+ATE IPA P + M G T
Sbjct: 266 EATETMYIPAYPICSRIIIMYGFT 195
>gb|CD889881.1|CD889881 G118.113F10F010716 G118 Triticum aestivum cDNA clone G118113F10,
mRNA sequence
Length = 624
Score = 210 bits (454), Expect = 7e-054
Identities = 88/151 (58%), Positives = 114/151 (75%)
Frame = +1 / +3
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PY+AMV LQ GFAGM++I+VASL+ GMSH+VLVVYRN+VA VMAPFAL+FER RPK
Sbjct: 36 VKPYLAMVLLQVGFAGMYIIAVASLKAGMSHFVLVVYRNLVATAVMAPFALYFERGQRPK 215
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M++ +F+KI+ L LEPV+DQN +MG TSA F++AL NILPA+TFV A++LRME++
Sbjct: 216 MTITIFLKIMGLAFLEPVIDQNLYFMGAKLTSAGFATALVNILPAVTFVLALLLRMEKVR 395
Query: 427 IXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
+ SQA GT TV +LM+L I+
Sbjct: 396 LRSLHSQAKIAGTVLTVAGAVLMVLYHGPIV 488
>gb|CK195884.1|CK195884 FGAS004330 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 863
Score = 204 bits (441), Expect = 5e-052
Identities = 88/144 (61%), Positives = 111/144 (77%)
Frame = +1 / +3
Query: 88 VFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFI 267
V LQ G+AGM+++SVASL++GMSHYVLV YRN+VA +VM PFAL+FE+ TRPKM+L +FI
Sbjct: 108 VRLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLVATLVMLPFALFFEKGTRPKMTLRIFI 287
Query: 268 KILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQ 447
KIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++ + SQ
Sbjct: 288 KILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLRLRSSHSQ 467
Query: 448 AXXXGTAXTVXXXLLMILXXXXII 519
A GT TV +LMI+ ++
Sbjct: 468 AKVAGTICTVIGAVLMIMYHGPVV 539
>gb|CV760955.1|CV760955 FGAS055342 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 899
Score = 200 bits (431), Expect = 1e-050
Identities = 86/133 (64%), Positives = 104/133 (78%)
Frame = +1 / +3
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YR++VA +VM PFAL+FE+ TRPK
Sbjct: 273 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRSLVATLVMLPFALFFEKGTRPK 452
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M+L +FIKIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME
Sbjct: 453 MTLRIFIKILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMETSG 632
Query: 427 IXXRRSQAXXXGT 465
SQA GT
Sbjct: 633 SGAPHSQARFAGT 671
>gb|BJ235147.1|BJ235147 BJ235147 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15f23 5', mRNA sequence
Length = 537
Score = 195 bits (420), Expect = 4e-049
Identities = 81/126 (64%), Positives = 101/126 (80%)
Frame = +1 / +1
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+ A +VM PFAL+FE+ RPK
Sbjct: 160 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLAATLVMLPFALFFEKGIRPK 339
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIV 426
M+L +FIKIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++
Sbjct: 340 MTLRIFIKILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLR 519
Query: 427 IXXRRS 444
+ S
Sbjct: 520 LRSSHS 537
>gb|CD868098.1|CD868098 AZO2.108A10F001113 AZO2 Triticum aestivum cDNA clone AZO2108A10,
mRNA sequence
Length = 673
Score = 193 bits (416), Expect = 1e-048
Identities = 83/139 (59%), Positives = 105/139 (75%)
Frame = +1 / +3
Query: 103 GFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILAL 282
G AGM+++SVASL++GMSHYVLV YRN+ A +VM PFAL+FE+ RPKM+L +FIKIL L
Sbjct: 102 GTAGMYIVSVASLKRGMSHYVLVTYRNLAATLVMLPFALFFEKGIRPKMTLRIFIKILGL 281
Query: 283 GLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQAXXXG 462
LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++ + SQA G
Sbjct: 282 ALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLRLRSSHSQAKVAG 461
Query: 463 TAXTVXXXLLMILXXXXII 519
T TV +LMI+ ++
Sbjct: 462 TICTVIGAVLMIMYHGPVV 518
Score = 104 bits (222), Expect = 7e-022
Identities = 55/133 (41%), Positives = 65/133 (48%)
Frame = -1 / -1
Query: 497 IISKXXXTVXAVPXXXAWXXXXXXXXXXXXSMMAFTKVRAGNMLVNAEEKLADVLFTPM* 318
IIS TV VP AW MA KV AG ML +A+EKLA+V P *
Sbjct: 496 IISTAPMTVQMVPATLAWLCELRSRSFSIRRTMAMMKVTAGRMLTSADEKLAEVSLLPT* 317
Query: 317 MKFWSSTGSSNPKARILMNTGRLILGLVFLSNHSANGXXXXXXXXXXXXXXX*WLIPCRR 138
+FWSSTGSS+ RILM R+ILG + S A G *WL+P
Sbjct: 316 YRFWSSTGSSSASPRILMKMRRVILGRIPFSKKRAKGSMTSVAARLR*VTST*WLMPRLS 137
Query: 137 DATEMRNIPAKPN 99
+ATE IPA P+
Sbjct: 136 EATETMYIPAVPD 98
>gb|BU099391.1|BU099391 WHE3306_H05_O10ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3306_H05_O10,
mRNA sequence
Length = 739
Score = 185 bits (398), Expect = 4e-046
Identities = 80/161 (49%), Positives = 107/161 (66%)
Frame = +1 / +3
Query: 58 WRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKT 237
+ K PY+AM+ LQFG+AGM +I+ SL GMSHYVLVVYR+ A + +APFAL FERK
Sbjct: 147 FEKAKPYIAMICLQFGYAGMNVITKVSLNGGMSHYVLVVYRHAFATVSIAPFALIFERKV 326
Query: 238 RPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRME 417
RPKM+ F++I L LL PV+DQNF Y+G+ T +F+ A++NILPA+TFV A I RME
Sbjct: 327 RPKMTWSSFLQIFVLALLGPVIDQNFYYVGLKYTGPTFACAMSNILPAMTFVMAFIFRME 506
Query: 418 RIVIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
++ + R QA GT TV +LM L ++ + H
Sbjct: 507 KVDLRKVRCQAKVAGTVVTVAGAMLMTLYKGPLMRMAWTSH 629
Score = 102 bits (217), Expect = 4e-021
Identities = 55/146 (37%), Positives = 65/146 (44%)
Frame = -1 / -1
Query: 500 SIISKXXXTVXAVPXXXAWXXXXXXXXXXXXSMMAFTKVRAGNMLVNAEEKLADVLFTPM 321
S+IS TV VP AW M A TKV AG ML+ A K+ V P
Sbjct: 589 SVISIAPATVTTVPATFAWHRTFLRSTFSILKMKAITKVMAGRMLLMAHAKVGPVYLRPT 410
Query: 320 *MKFWSSTGSSNPKARILMNTGRLILGLVFLSNHSANGXXXXXXXXXXXXXXX*WLIPCR 141
* KFWS TG + +I +I GL FLS ANG *WL+P
Sbjct: 409 **KFWSITGPRSASTKIWRKDDHVIFGLTFLSKIRANGAMETVAKAWRYTTST*WLMPPL 230
Query: 140 RDATEMRNIPAKPN*RNTMAM*GITF 63
+ M +PA PN R MAM*G+ F
Sbjct: 229 SETLVMTFMPA*PNCRQIMAM*GLAF 152
>gb|CD930086.1|CD930086 GR45.110B22F010418 GR45 Triticum aestivum cDNA clone GR45110B22,
mRNA sequence
Length = 509
Score = 155 bits (333), Expect = 4e-037
Identities = 65/118 (55%), Positives = 85/118 (72%)
Frame = +1 / +1
Query: 58 WRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKT 237
+ K PY+AM+ LQFG+AGM +I+ SL GMSHYVLVVYR+ A + +APFAL ERK
Sbjct: 154 FEKAKPYIAMICLQFGYAGMNVITKVSLNGGMSHYVLVVYRHAFATVSIAPFALILERKV 333
Query: 238 RPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILR 411
RPKM+ F++I L LL PV+DQNF Y+G+ T +F+ A++NILPA+TF A I R
Sbjct: 334 RPKMTWSSFLQIFVLALLGPVIDQNFYYVGLKYTGPNFACAMSNILPAMTFAMAFIFR 507
>gb|CA593225.1|CA593225 wpa1c.pk003.n16 wpa1c Triticum aestivum cDNA clone wpa1c.pk003.n16
5' end, mRNA sequence
Length = 535
Score = 84.5 bits (178), Expect(3) = 6e-037
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1 / +2
Query: 40 MELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGM 153
MEL G+WRKVMPYMAMVFLQFG+AG+FL+SVASLRQGM
Sbjct: 107 MELVGSWRKVMPYMAMVFLQFGYAGLFLLSVASLRQGM 220
Score = 84.0 bits (177), Expect(3) = 6e-037
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1 / +1
Query: 181 NVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYM 324
N +AA MAPFALWFERKTR KM+L +F KI+AL LLEP+LDQNF ++
Sbjct: 250 NAIAAAAMAPFALWFERKTRRKMTLSLFYKIVALALLEPILDQNFFHI 393
Score = 79.4 bits (167), Expect(2) = 2e-028
Identities = 35/48 (72%), Positives = 36/48 (75%)
Frame = +2 / +2
Query: 179 GT*WQPLSWLHSRYGLRGKQGLK*AYRCSSRSLLWDYSNPCLTKTSST 322
GT PL WL SRYGLRGKQG K* CS+RSLLW YSN LTKTSST
Sbjct: 248 GTPSPPLPWLPSRYGLRGKQGAK*PSPCSTRSLLWHYSNQSLTKTSST 391
Score = 68.4 bits (143), Expect(2) = 2e-025
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -3 / -1
Query: 153 HSLPQGRDGDEEHSGEAELKKHHGHVRHHLPPCPGKFHAIRSSQLAGCLTP 1
H+L Q RDG+EE G AEL++ HGHVRHHLPP P + H + S + + P
Sbjct: 220 HALAQRRDGEEEEPGVAELQEDHGHVRHHLPPTPDELHDLTLSSSS*TILP 68
Score = 68.0 bits (142), Expect(2) = 2e-025
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = -3 / -2
Query: 324 HVDEVLVKHGFE*SQSKDLDEHR*AHFRPCFPLKP*REWSHDNGCHYVP 178
+V+EVLVK FE* QS DL E HF PCFPLKP*RE SH +G VP
Sbjct: 393 YVEEVLVKDWFE*CQSNDLVEQGEGHFAPCFPLKP*REGSHGSGGDGVP 247
Score = 66.6 bits (139), Expect(2) = 2e-028
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 27 RIGSHGTCRDMEEGDALHGHGVSSVRLRRNVPHLRRVPAAGNE 155
R HG R++EEGDALHGHG+ +VRLRR +P LRRV A G+E
Sbjct: 94 RGSDHGARRELEEGDALHGHGLPAVRLRRALPPLRRVAAPGHE 222
Score = 24.4 bits (47), Expect(3) = 6e-037
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 154 SHYVLVVYR 180
SHYVLVVYR
Sbjct: 222 SHYVLVVYR 248
>gb|CN009221.1|CN009221 WHE3856_C04_E08ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3856_C04_E08,
mRNA sequence
Length = 595
Score = 91.3 bits (193), Expect(2) = 2e-036
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1 / +2
Query: 229 RKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIIL 408
RK RPKM+ F++I L LL PV+DQNF Y+G+ T +F+ A++NILPA+TFV A I
Sbjct: 374 RKVRPKMTWSSFLQIFVLALLGPVIDQNFYYVGLKYTGPTFACAMSNILPAMTFVMAFIF 553
Query: 409 RMERIVIXXRRSQA 450
RME++ + R QA
Sbjct: 554 RMEKVDLRNLRCQA 595
Score = 83.1 bits (175), Expect(2) = 2e-036
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 58 WRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKT 237
+ K PY+AM+ LQFG+AGM +I+ SL GMSHYVLVVYR+ A + +APFAL ER T
Sbjct: 58 FEKAKPYIAMICLQFGYAGMNVITKVSLNGGMSHYVLVVYRHAFATVSIAPFALILERYT 237
>gb|BM136936.1|BM136936 WHE0467-0470_K17_K17ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0467-0470_K17_K17, mRNA sequence
Length = 411
Score = 151 bits (325), Expect = 5e-036
Identities = 64/116 (55%), Positives = 83/116 (71%)
Frame = +1 / +1
Query: 58 WRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKT 237
+ K PY+AM+ LQFG+AGM +I SL GMSHYVLVVYR+ A + +APFAL ERK
Sbjct: 61 FEKAKPYIAMICLQFGYAGMNVIXQVSLNGGMSHYVLVVYRHAFATVSIAPFALILERKV 240
Query: 238 RPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAII 405
RPKM+ F++I L LL PV+D NF Y+G+ T +F+ A++NILPA+TFV A I
Sbjct: 241 RPKMTWSSFLQIFVLALLGPVIDXNFYYVGLKYTGPTFACAMSNILPAMTFVMAFI 408
>gb|BI479667.1|BI479667 WHE3456_F05_K10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3456_F05_K10, mRNA sequence
Length = 244
Score = 151 bits (324), Expect = 6e-036
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PYMAMVFLQFG+AG+FL+SVASLRQGMSHYVLVVYRN +AA MAPFAL F KTR KM+
Sbjct: 1 PYMAMVFLQFGYAGLFLLSVASLRQGMSHYVLVVYRNAIAAAAMAPFALLFVEKTRRKMT 180
Query: 253 LPVFIKILALGLLEPVLDQNF 315
L +F KI+AL LLEPVLDQNF
Sbjct: 181 LSLFYKIVALALLEPVLDQNF 243
Score = 104 bits (222), Expect = 7e-022
Identities = 48/81 (59%), Positives = 56/81 (69%)
Frame = -3 / -2
Query: 315 EVLVKHGFE*SQSKDLDEHR*AHFRPCFPLKP*REWSHDNGCHYVPVDNKDIVAHSLPQG 136
EVLVK E* QS DL E HF PCF K *RE SH +G VPVD++D+VAH+L Q
Sbjct: 243 EVLVKDWLE*CQSDDLVEQGEGHFAPCFLNKQ*RERSHGSGGDGVPVDDEDVVAHALTQR 64
Query: 135 RDGDEEHSGEAELKKHHGHVR 73
RDG+EE G AEL++ HGHVR
Sbjct: 63 RDGEEEEPGVAELEEDHGHVR 1
>gb|CA718756.1|CA718756 wkm2n.pk002.h17 wkm2n Triticum aestivum cDNA clone wkm2n.pk002.h17
5' end, mRNA sequence
Length = 507
Score = 136 bits (291), Expect = 2e-031
Identities = 55/87 (63%), Positives = 69/87 (79%)
Frame = +1 / +1
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+ A +VM PFAL+F + RPK
Sbjct: 178 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLAATLVMLPFALFFXKGIRPK 357
Query: 247 MSLPVFIKILALGLLEPVLDQNFIYMG 327
M+L +FIKIL L LLEPVLDQ + G
Sbjct: 358 MTLRIFIKILGLALLEPVLDQEPVLRG 438
>gb|BU100162.1|BU100162 WHE3315_H06_P11ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3315_H06_P11,
mRNA sequence
Length = 391
Score = 126 bits (269), Expect = 2e-028
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = +1 / +2
Query: 67 VMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPK 246
V PYM M+ LQ G+AGM+++SVASL++GMSHYVLV YRN+VA +VM PFAL+FE+ TRPK
Sbjct: 170 VKPYMMMILLQIGYAGMYIVSVASLKRGMSHYVLVTYRNLVATLVMLPFALFFEKGTRPK 349
Query: 247 MSLPVFIKILALGL 288
M+L +FIKIL L L
Sbjct: 350 MTLRIFIKILGLAL 391
>gb|CK210291.1|CK210291 FGAS022092 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 124 bits (266), Expect = 6e-028
Identities = 54/158 (34%), Positives = 91/158 (57%)
Frame = +1 / +1
Query: 28 GSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMA 207
G + M L G WR+ P+ M+ +Q + M+ ++ A+ +G++ YV V YR+++ A+++
Sbjct: 106 GGETMGLGGLWRRYAPHNMMIMVQLCYTLMYFVTEAAFNRGLNPYVYVTYRHLLVALLLW 285
Query: 208 PFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALT 387
PFA + E+K RPKM+ +F++I L LL L N + + TS +F +++ N + ++T
Sbjct: 286 PFAYYHEKKLRPKMTWMLFLEIFVLSLLGVSLTLNMYFASLKYTSPTFVTSMVNTVASIT 465
Query: 388 FVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMIL 501
FV AI LRME + + R A GTA + M L
Sbjct: 466 FVIAIALRMEIVDLRSARGLAKVAGTAVSFAGVTTMTL 579
>gb|CF132947.1|CF132947 WHE4352_C01_E02ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4352_C01_E02, mRNA sequence
Length = 698
Score = 124 bits (265), Expect = 9e-028
Identities = 57/166 (34%), Positives = 93/166 (56%)
Frame = +1 / +2
Query: 4 GEAAC*LRGSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRN 183
GE A D + G K ++AM+ LQFG+AG ++S +L G+S V VYRN
Sbjct: 182 GEGAAMADAVDARRVCGMPEKAQLHVAMLALQFGYAGFHVVSRLALNMGISKLVFPVYRN 361
Query: 184 VVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSAL 363
++A ++ PFA + E+K RP+++L + + L L +Q F +G+++TS +F+SA+
Sbjct: 362 IIALFLLVPFAYFLEKKDRPRLTLGLAVHFFFLALCGITANQGFYLLGLDNTSPTFASAI 541
Query: 364 TNILPALTFVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMIL 501
N +PA+TF A LR+E++ + R A GT V ++ L
Sbjct: 542 QNSVPAITFGMAAALRIEKVRLDRRDGVAKVLGTLACVAGASVITL 679
>gb|CK198626.1|CK198626 FGAS007113 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 123 bits (264), Expect = 1e-027
Identities = 56/166 (33%), Positives = 93/166 (56%)
Frame = +1 / +3
Query: 4 GEAAC*LRGSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRN 183
GE A D + G K ++AM+ LQFG+AG ++S +L G+S V VYRN
Sbjct: 192 GEGAAMADAVDARRVCGMPEKAQLHVAMLALQFGYAGFHVVSRLALNMGISKLVFPVYRN 371
Query: 184 VVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSAL 363
++A ++ PFA + E+K RP+++L + + L L +Q F +G+++TS +F+SA+
Sbjct: 372 IIALFLLVPFAYFLEKKDRPRLTLGLAVHFFFLALCGITANQGFYLLGLDNTSPTFASAI 551
Query: 364 TNILPALTFVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMIL 501
N +PA+TF A LR+E++ + R A GT + ++ L
Sbjct: 552 QNSVPAITFGMAAALRIEKVRLDRRDGVAKVLGTLACIAGASVITL 689
>gb|BF293133.1|BF293133 WHE2164_A01_A02ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2164_A01_A02, mRNA sequence
Length = 495
Score = 118 bits (253), Expect = 4e-026
Identities = 50/146 (34%), Positives = 88/146 (60%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
KV +M ++ LQF AG ++S A+L G+S V +VYRNV++ ++APFA + E+K RP
Sbjct: 55 KVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLALLAPFAYFLEKKDRP 234
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++ + + L L+ +Q F +G+ S +++SA+ N++PA+TFV A +LR+E++
Sbjct: 235 PLTFSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQV 414
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
+ R A GT ++ ++ L
Sbjct: 415 DLGRRHGVAKVVGTVVSIGGATVITL 492
>gb|BJ305214.1|BJ305214 BJ305214 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd29d21 5', mRNA sequence
Length = 535
Score = 118 bits (253), Expect = 4e-026
Identities = 52/145 (35%), Positives = 86/145 (59%)
Frame = +1 / +3
Query: 4 GEAAC*LRGSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRN 183
GE A D + G K ++AM+ LQFG+AG ++S +L G+S V VYRN
Sbjct: 96 GEGAAMADAVDARRVCGMPEKAQLHVAMLALQFGYAGFHVVSRLALNMGISKLVFPVYRN 275
Query: 184 VVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSAL 363
++A ++ PFA + E+K RP+++L + + L L +Q F +G+++TS +F+SA+
Sbjct: 276 IIALFLLVPFAYFLEKKDRPRLTLGLAVHFFFLALCGITANQGFYLLGLDNTSPTFASAI 455
Query: 364 TNILPALTFVNAIILRMERIVIXXR 438
N +PA+TF A LR+E++ + R
Sbjct: 456 QNSVPAITFGMAAALRIEKVRLDRR 530
>gb|CK161874.1|CK161874 FGAS014450 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1110
Score = 118 bits (253), Expect = 4e-026
Identities = 50/146 (34%), Positives = 88/146 (60%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
KV +M ++ LQF AG ++S A+L G+S V +VYRNV++ ++APFA + E+K RP
Sbjct: 129 KVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLALLAPFAYFLEKKDRP 308
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++ + + L L+ +Q F +G+ S +++SA+ N++PA+TFV A +LR+E++
Sbjct: 309 PLTFSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQV 488
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
+ R A GT ++ ++ L
Sbjct: 489 DLGRRHGVAKVVGTVVSIGGATVITL 566
>gb|BJ212102.1|BJ212102 BJ212102 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh34m21 5', mRNA sequence
Length = 519
Score = 117 bits (251), Expect = 7e-026
Identities = 51/140 (36%), Positives = 84/140 (60%)
Frame = +1 / +1
Query: 4 GEAAC*LRGSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRN 183
GE A D + G K ++AM+ LQFG+AG ++S +L G+S V VYRN
Sbjct: 91 GEGAAMADAVDARRVCGMPEKAQLHVAMLALQFGYAGFHVVSRLALNMGISKLVFPVYRN 270
Query: 184 VVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSAL 363
++A ++ PFA + E+K RP+++L + + L L +Q F +G+++TS +F+SA+
Sbjct: 271 IIALFLLVPFAYFLEKKDRPRLTLGLAVHFFFLALCGITANQGFYLLGLDNTSPTFASAI 450
Query: 364 TNILPALTFVNAIILRMERI 423
N +PA+TF A LR+E++
Sbjct: 451 QNSVPAITFGMAAALRIEKV 510
>gb|CV771662.1|CV771662 FGAS066055 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 874
Score = 117 bits (251), Expect = 7e-026
Identities = 49/138 (35%), Positives = 85/138 (61%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
KV +M ++ LQF AG ++S A+L G+S V +VYRNV++ ++APFA + E+K RP
Sbjct: 229 KVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLALLAPFAYFLEKKDRP 408
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++ + + L L+ +Q F +G+ S +++SA+ N++PA+TFV A +LR+E++
Sbjct: 409 PLTFSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQV 588
Query: 424 VIXXRRSQAXXXGTAXTV 477
+ R A GT ++
Sbjct: 589 DLGRRHGVAKVVGTVVSI 642
>gb|CV760179.1|CV760179 FGAS054563 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 116 bits (249), Expect = 1e-025
Identities = 49/146 (33%), Positives = 87/146 (59%)
Frame = +1 / +2
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
KV +M ++ LQF AG ++S A+L G+S V +VYRNV++ ++APFA + +K RP
Sbjct: 212 KVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLALLAPFAYFLHKKDRP 391
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++ + + L L+ +Q F +G+ S +++SA+ N++PA+TFV A +LR+E++
Sbjct: 392 PLTFSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQV 571
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
+ R A GT ++ ++ L
Sbjct: 572 DLGRRHGVAKAVGTVVSIGGATVITL 649
>gb|CK163391.1|CK163391 FGAS016017 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1028
Score = 107 bits (229), Expect = 8e-023
Identities = 47/146 (32%), Positives = 84/146 (57%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
KV +M ++ LQF AG ++ A+L G+S V +VYRNV++ ++ P A E+K RP
Sbjct: 142 KVKLFMGVLALQFLLAGFHIVCRAALNMGISKLVFIVYRNVISLALLGPCAYILEKKDRP 321
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++ + + L L+ +Q F +G+ S +++SA+ N++PA+TFV A +LR+E++
Sbjct: 322 PLTFSLLAEYXELALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQV 501
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
+ R A GT ++ ++ L
Sbjct: 502 DLGRRHGVAKVVGTVVSIGGATVITL 579
>gb|DR734183.1|DR734183 FGAS079939 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 861
Score = 105 bits (225), Expect = 3e-022
Identities = 47/153 (30%), Positives = 85/153 (55%)
Frame = +1 / +1
Query: 37 RMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFA 216
+M AG + MP AMV A M + +L QGM+ VL+ +R ++A + + P A
Sbjct: 118 KMWSAGCVEQWMPTAAMVATNIVIAVMTALLKQALNQGMNRLVLITFRQMLATVFLGPIA 297
Query: 217 LWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVN 396
+ ERKTRPK++ +F + G+L PVL Q +++G+ T+A+F++ N+LP +TF+
Sbjct: 298 YFKERKTRPKITAEIFAYLFLSGILGPVLLQYTLFVGLEYTTATFAATFGNLLPVVTFLI 477
Query: 397 AIILRMERIVIXXRRSQAXXXGTAXTVXXXLLM 495
++ E + + + A GT ++ +++
Sbjct: 478 SLAFGYEALEVRSKSGSAKISGTLLSLTGAMML 576
>gb|CD877208.1|CD877208 AZO4.002G11F010503 AZO4 Triticum aestivum cDNA clone AZO4002G11,
mRNA sequence
Length = 614
Score = 104 bits (221), Expect = 1e-021
Identities = 47/84 (55%), Positives = 58/84 (69%)
Frame = +1 / +3
Query: 268 KILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQ 447
KIL L LLEPVLDQN Y+G TSASFSSAL NILPA+TF+ AI+LRME++ + SQ
Sbjct: 12 KILGLALLEPVLDQNLYYVGNKLTSASFSSALVNILPAVTFIMAIVLRMEKLRLRSSHSQ 191
Query: 448 AXXXGTAXTVXXXLLMILXXXXII 519
A GT TV +LMI+ ++
Sbjct: 192 AKVAGTICTVIGAVLMIMYHGPVV 263
>gb|CV770920.1|CV770920 FGAS065313 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 103 bits (219), Expect = 2e-021
Identities = 49/160 (30%), Positives = 82/160 (51%)
Frame = +1 / +2
Query: 22 LRGSDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIV 201
LR D+ T Y+ + +Q + GM+++S A+ GM+ +V + YR A ++
Sbjct: 140 LRSQDKEVAMATDAGKKAYVVAMVIQVIYTGMYVVSKAAFDGGMNTFVFIFYRQAAATLL 319
Query: 202 MAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPA 381
+ P A+ ER+ P MSL +F KI LL + N + + TSA+ +SA +N +P
Sbjct: 320 LLPLAILLERRNAPPMSLWLFTKIFMYALLGNTVSMNLHNISLKYTSATVASATSNSIPV 499
Query: 382 LTFVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMIL 501
+TF+ A++L +E I + A G A V L++ L
Sbjct: 500 ITFLFAVLLHLEAIKLRAASGTAKLAGVALCVAGILVIAL 619
>gb|AL828006.1|AL828006 AL828006 p:739 Triticum aestivum cDNA clone G06_p739_plate_4, mRNA
sequence
Length = 514
Score = 100 bits (212), Expect(2) = 7e-021
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1 / +2
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
+M++ +FIKI+ L LEPVLDQN YMG TSA F +AL NILPA+TF+ A+I+RME++
Sbjct: 38 QMTITIFIKIMGLAFLEPVLDQNLYYMGAKLTSAGFGAALINILPAVTFMLALIMRMEKV 217
Query: 424 VIXXRRSQAXXXGTAXTV 477
+ SQA GT TV
Sbjct: 218 RLRSLHSQAKIAGTVLTV 271
Score = 21.7 bits (41), Expect(2) = 7e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 211 FALWFERKTRP 243
FAL+FER RP
Sbjct: 4 FALYFERGLRP 36
>gb|CA733579.1|CA733579 wlp1c.pk008.j6 wlp1c Triticum aestivum cDNA clone wlp1c.pk008.j6 5'
end, mRNA sequence
Length = 570
Score = 100 bits (214), Expect = 9e-021
Identities = 45/142 (31%), Positives = 77/142 (54%)
Frame = +1 / +2
Query: 76 YMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSL 255
Y+ + +Q + GM+++S A+ GM+ +V + YR A +++ P A+ ER+ P MSL
Sbjct: 56 YVVALVIQVIYTGMYVVSKAAFDGGMNTFVFIFYRQAAATLLLLPLAILLERRNAPPMSL 235
Query: 256 PVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXX 435
+F KI LL + N + + TSA+ +SA +N +P +TF+ A++L +E I +
Sbjct: 236 WLFTKIFMYALLGNTVSMNLHNISLKYTSATVASATSNSIPVITFLFAVLLHLEAIKLRA 415
Query: 436 RRSQAXXXGTAXTVXXXLLMIL 501
A G A V L++ L
Sbjct: 416 ASGTAKLAGVALCVAGILVIAL 481
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 509,178,752
Number of Sequences: 636343
Number of extensions: 7785261
Number of successful extensions: 136228
Number of sequences better than 1.0e-020: 46
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 11433417856
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)