TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAI15h08.yg.2.1
(557 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF133398.1|CF133398 WHE4357_E10_J19ZT Wheat meiotic flor... 383 e-106
gb|BJ248053.1|BJ248053 BJ248053 Y. Ogihara unpublished cDNA... 304 7e-083
gb|BG606256.1|BG606256 WHE2962_F04_L08ZS Wheat dormant embr... 294 6e-079
gb|BE417613.1|BE417613 MUG022.G12R990620 ITEC MUG Wheat Spi... 146 1e-053
gb|CV771120.1|CV771120 FGAS065513 Triticum aestivum FGAS: L... 89 1e-029
>gb|CF133398.1|CF133398 WHE4357_E10_J19ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4357_E10_J19, mRNA sequence
Length = 760
Score = 383 bits (831), Expect = e-106
Identities = 158/178 (88%), Positives = 165/178 (92%)
Frame = -2 / +3
Query: 535 YAPVVYSQETVXYIEGLDMMXGEEDRENILRSRASGKAVLTRPFRLMSNHLGVVLTFPVY 356
YAPV+YSQETV YIEGLDMM GEEDRENILRSRA+GKAVLTRPFRLMSNHLGVVLTFPVY
Sbjct: 48 YAPVIYSQETVSYIEGLDMMSGEEDRENILRSRATGKAVLTRPFRLMSNHLGVVLTFPVY 227
Query: 355 HADLPSDAKEEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTNISNPLVM 176
DLP DAK EDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTN SNPLVM
Sbjct: 228 LVDLPPDAKVEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVM 407
Query: 175 YGSEVPLGNPSSSHICMLDFGDPFRKHHMVCRYRNKPHVPWSAISTPSGVFVICMLVG 2
YGSEVPLG PS SH C LDFGDPFR HHM+CRYR++PHVPWSAI+TPSGVFVI ML+G
Sbjct: 408 YGSEVPLGAPSPSHTCTLDFGDPFRNHHMICRYRSEPHVPWSAITTPSGVFVILMLIG 581
Score = 250 bits (540), Expect = 1e-065
Identities = 115/178 (64%), Positives = 126/178 (70%)
Frame = +3 / -1
Query: 3 PTSIHMTKTPDGVEIADHGT*GLFLYLQTI*CFLNGSPKSSMQMCDDEGLPRGTSDPYMT 182
P SI +T TPDGV IADHGT G LYL +* FLNGSPKSS+Q+C+ EG PRGTSDPYMT
Sbjct: 580 PISISITNTPDGVVIADHGTWGSLLYLHIM**FLNGSPKSSVQVCEGEGAPRGTSDPYMT 401
Query: 183 RGFEMFVXXXXXXXXXXLPASCLNKFSTNDSTSNAPPRYPAVAATRSSSLASEGRSA**T 362
RGFE FV LPASC +KFST+DSTS APPRYPAVAATRSS+LAS GRS *T
Sbjct: 400 RGFEWFVTS*TFTTSS*LPASCRSKFSTSDSTSKAPPRYPAVAATRSSTLASGGRSTR*T 221
Query: 363 GKVNTTPR*FDMSRNGRVRTAFPDALDLKIFXXXXXXXXXXXXXXXXTVSCEYTTGAY 536
G V+TTPR FDMS NG VRTAFP ALDL++F TVS E TGAY
Sbjct: 220 GNVSTTPRWFDMSLNGLVRTAFPVALDLRMFSRSSSPDIMSSPSM*DTVSWE*MTGAY 47
Score = 239 bits (517), Expect = 2e-062
Identities = 108/176 (61%), Positives = 129/176 (73%)
Frame = +2 / -3
Query: 8 KHTYDKDTRWGRNCRPWDMRLVSVSANHMMLSEWITKI*HADVR**GVAKRNF*SIHDKR 187
KH Y++ TR G N RPW+M L SVSA H+M+SEWITKI A V *G KR+F IHDKR
Sbjct: 575 KHKYNEHTRRGSNSRPWNMGLASVSAYHVMISEWITKIKRAGV*G*GGTKRDFRPIHDKR 396
Query: 188 VRNVCDIINIYHQFLIAS*LPQQIFH**FYIKCSPKVSCGGSNTILLLGIRRKIRMIDRK 367
+R VCDIINI+HQ LIAS*LPQQIFH * YI+ + K+S G S+TIL LGIR ++ +DR+
Sbjct: 395 IRMVCDIINIHHQLLIAS*LPQQIFHK*LYIESASKISGGSSDTILHLGIRGEVDKVDRE 216
Query: 368 SQYDTQVIRHEPEWSSENCLPRCS*PQNILTVLLAXHHVEPLDVXDGLLRVYNGRV 535
QY QV+RHEPEW E+ LP PQ++L VLLA HHVEPLDV LL V + RV
Sbjct: 215 RQYHAQVVRHEPEWPGEDGLPGRPRPQDVLPVLLAGHHVEPLDVGHRLLGVDDRRV 48
Score = 216 bits (467), Expect = 1e-055
Identities = 103/176 (58%), Positives = 111/176 (63%)
Frame = +1 / -2
Query: 16 I*QRHQMG*KLQTMGHEACFCICKPYDAF*MDHQNLACRCAMMRGCQEELLIHT*QEGSK 195
+*+ HQ G* QTM H A FCIC D F*MDHQN ACRC +RG QE L HT*QE S
Sbjct: 567 V*RTHQTG***QTMEHGARFCICISCDDF*MDHQNQACRCVRVRGHQEGLQTHT*QEDSN 388
Query: 196 CL*HHKHLPPIPDCQLAASTNFPLMILHQMLPQGILRWQQHDPPPWHQKEDPHDRQEKSI 375
L*HHKH PP PDCQLAA+ NFP + LH+ Q I R Q+HDPPPWH RQ S+
Sbjct: 387 GL*HHKHSPPAPDCQLAAAANFPQVTLHRKRLQDIRR*QRHDPPPWHPGGGRQGRQGTSV 208
Query: 376 RHPGDST*AGMVE*ELPSPMLLTSKYSHGPPRXTSCRAPRCXXRSPASIQRARTCP 543
PG ST*A M * PS TS S GPPR TSCRAPRC SP S ART P
Sbjct: 207 PRPGGST*A*MAW*GRPSRSPSTSGCSPGPPRRTSCRAPRCRTPSPGSR*PARTRP 40
Score = 188 bits (404), Expect = 6e-047
Identities = 94/157 (59%), Positives = 100/157 (63%)
Frame = -3 / +1
Query: 477 CXARRTVRIF*GQEHRGRQFSLDHSGSCRITWVSY*LFLSIMRIFLLMPRRRIVLLPPQD 298
C ARRT R *G+ GR S HSGSCR TW Y* LS + MPR RIV L P D
Sbjct: 106 CPARRTGRTS*GRGRPGRPSSPGHSGSCRTTWAWY*RSLSTLSTSPRMPRWRIVSLLPPD 285
Query: 297 TLGEHLM*NH*WKIC*GS*LAIRNWW*MFMMSQTFRTLLSCMDQKFLLATPHHRTSAC*I 118
L M*+H WKIC GS*LAIR+WW*MFMMSQT R LLSCM K LL PH T A I
Sbjct: 286 ILEALSM*SHLWKICCGS*LAIRSWW*MFMMSQTIRILLSCMGLKSLLVPPHPHTPARLI 465
Query: 117 LVIHSESIIWFADTETSLMSHGLQFLPHLVSLSYVCL 7
LVIHSE I +ADTE S M HGL LP LV Y+CL
Sbjct: 466 LVIHSEIIT*YADTEASPMFHGLLLLPRLVCSLYLCL 576
Score = 171 bits (367), Expect(2) = 9e-058
Identities = 63/100 (63%), Positives = 76/100 (76%)
Frame = -1 / +2
Query: 308 HRRIPWGSI*CRIISGKFVEAASWQSGIGGKCL*CHKHFEPSCHVWIRSSSWQPLIIAHL 129
+RRI W CR+ GKF AASWQSG GG+CL*CHK FE SCHVW+ S SW PL + HL
Sbjct: 275 YRRISWRRFRCRVTCGKFAAAASWQSGAGGECL*CHKPFESSCHVWV*SPSWCPLTLTHL 454
Query: 128 HARFW*SIQKASYGLQIQKQASCPMVCNFYPIWCLCHMYA 9
HA FW*SIQK+S+ +QIQK+A C MVC +YP+WC+ + YA
Sbjct: 455 HA*FW*SIQKSSHDMQIQKRAPCSMVCYYYPVWCVRYTYA 574
Score = 73.5 bits (154), Expect(2) = 9e-058
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = -1 / +2
Query: 542 GQVRARCILAGDRXXHRGARHDVXRGGP*EYFEVKSIGEGSSHSTIPAHVESPG 381
G+VRA +L GD HRGARHDV RGGP E+ EV+ EG H I AHVE PG
Sbjct: 41 GRVRAGHLLPGDGVLHRGARHDVRRGGPGEHPEVEGDREGRPHQAIQAHVEPPG 202
>gb|BJ248053.1|BJ248053 BJ248053 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4l08 5', mRNA sequence
Length = 459
Score = 304 bits (658), Expect(2) = 7e-083
Identities = 125/143 (87%), Positives = 131/143 (91%)
Frame = -2 / +1
Query: 457 ENILRSRASGKAVLTRPFRLMSNHLGVVLTFPVYHADLPSDAKEEDRVAATAGYLGGAFD 278
+NILRSRA+GKAVLTRPFRLMSNHLGVVLTFPVY DLP DAK EDRVAATAGYLGGAFD
Sbjct: 31 QNILRSRATGKAVLTRPFRLMSNHLGVVLTFPVYLVDLPPDAKVEDRVAATAGYLGGAFD 210
Query: 277 VESLVENLLRQLAGNQELVVNVYDVTNISNPLVMYGSEVPLGNPSSSHICMLDFGDPFRK 98
V SLVENLLRQLAGNQELVVNVYDVTN SNPL MYGSEVPLG PS SH C LDFGDPFR
Sbjct: 211 VXSLVENLLRQLAGNQELVVNVYDVTNHSNPLXMYGSEVPLGAPSPSHTCTLDFGDPFRN 390
Query: 97 HHMVCRYRNKPHVPWSAISTPSG 29
HHM+CRYR++PHVPWSAI+TPSG
Sbjct: 391 HHMICRYRSEPHVPWSAITTPSG 459
Score = 228 bits (493), Expect(2) = 2e-060
Identities = 101/142 (71%), Positives = 110/142 (77%)
Frame = +3 / -2
Query: 30 PDGVEIADHGT*GLFLYLQTI*CFLNGSPKSSMQMCDDEGLPRGTSDPYMTRGFEMFVXX 209
PDGV IADHGT G LYL +* FLNGSPKSS+Q+C+ EG PRGTSDPYM RGFE FV
Sbjct: 458 PDGVVIADHGTWGSLLYLHIM**FLNGSPKSSVQVCEGEGAPRGTSDPYMXRGFEWFVTS 279
Query: 210 XXXXXXXXLPASCLNKFSTNDSTSNAPPRYPAVAATRSSSLASEGRSA**TGKVNTTPR* 389
LPASC NKFST+D TS APPRYPAVAATRSS+LAS GRS *TG V+TTPR
Sbjct: 278 *TLTTSS*LPASCRNKFSTSDXTSKAPPRYPAVAATRSSTLASGGRSTR*TGNVSTTPRW 99
Query: 390 FDMSRNGRVRTAFPDALDLKIF 455
FDMS NG VRTAFP ALDL++F
Sbjct: 98 FDMSLNGLVRTAFPVALDLRMF 33
Score = 192 bits (414), Expect = 2e-048
Identities = 89/143 (62%), Positives = 104/143 (72%)
Frame = +2 / -1
Query: 29 TRWGRNCRPWDMRLVSVSANHMMLSEWITKI*HADVR**GVAKRNF*SIHDKRVRNVCDI 208
TRWG N RPW+M L SVSA H+M+SE ITKI* A V *G KR+F IH KR+ VCDI
Sbjct: 459 TRWGSNSRPWNMGLASVSAYHVMISERITKI*RAGV*G*GGTKRDFRPIHXKRI*MVCDI 280
Query: 209 INIYHQFLIAS*LPQQIFH**FYIKCSPKVSCGGSNTILLLGIRRKIRMIDRKSQYDTQV 388
INI HQ LIAS*LPQQIFH * YI+ + KVS G SNTIL LGIR K+ +DR+ Q+ QV
Sbjct: 279 INIDHQLLIAS*LPQQIFHK*LYIESASKVSRGSSNTILHLGIRGKVDKVDRERQHHAQV 100
Query: 389 IRHEPEWSSENCLPRCS*PQNIL 457
+RHEPEW E+ LP PQ++L
Sbjct: 99 VRHEPEWPREDGLPGGPGPQDVL 31
Score = 173 bits (373), Expect = 1e-042
Identities = 83/139 (59%), Positives = 87/139 (62%)
Frame = +1 / -3
Query: 31 QMG*KLQTMGHEACFCICKPYDAF*MDHQNLACRCAMMRGCQEELLIHT*QEGSKCL*HH 210
QMG* QTM H A FCIC D F* DHQNLACRC +RG QE L HT QE L*HH
Sbjct: 457 QMG***QTMEHGARFCICISCDDF*TDHQNLACRCVRVRGHQEGLQTHTXQEDLNGL*HH 278
Query: 211 KHLPPIPDCQLAASTNFPLMILHQMLPQGILRWQQHDPPPWHQKEDPHDRQEKSIRHPGD 390
KH PP PDCQLAA+TNFP + H+ QGI R QQHDPPPWH E RQ S PG
Sbjct: 277 KH*PPAPDCQLAAATNFPQVTXHRKRLQGIPR*QQHDPPPWHPGEGRQGRQGTSAPRPGG 98
Query: 391 ST*AGMVE*ELPSPMLLTS 447
ST*A M * PS TS
Sbjct: 97 ST*A*MAS*GRPSRWPWTS 41
Score = 166 bits (358), Expect(2) = 2e-041
Identities = 84/142 (59%), Positives = 90/142 (63%)
Frame = -3 / +2
Query: 456 RIF*GQEHRGRQFSLDHSGSCRITWVSY*LFLSIMRIFLLMPRRRIVLLPPQDTLGEHLM 277
R *G GR S HSGSCR TW * LS + F MPR RIVLL P+DTL M
Sbjct: 32 RTS*GPGPPGRPSSRGHSGSCRTTWAWC*RSLSTLSTFPRMPRWRIVLLLPRDTLEALSM 211
Query: 276 *NH*WKIC*GS*LAIRNWW*MFMMSQTFRTLLSCMDQKFLLATPHHRTSAC*ILVIHSES 97
+H WKIC GS*LAIR+WW MFMMSQT + LL CM K LL PH T A *ILVI SE
Sbjct: 212 XSHLWKICCGS*LAIRSWWSMFMMSQTIQILLXCMGLKSLLVPPHPHTPAR*ILVIRSEI 391
Query: 96 IIWFADTETSLMSHGLQFLPHL 31
I +ADTE S M HGL LPHL
Sbjct: 392 IT*YADTEASPMFHGLLLLPHL 457
Score = 159 bits (341), Expect = 3e-038
Identities = 59/93 (63%), Positives = 71/93 (76%)
Frame = -1 / +3
Query: 308 HRRIPWGSI*CRIISGKFVEAASWQSGIGGKCL*CHKHFEPSCHVWIRSSSWQPLIIAHL 129
+R IPW C + GKFV AASWQSG GG+CL*CHK F+ S HVW+ S SW PL + HL
Sbjct: 180 YRGIPWRRFRCXVTCGKFVAAASWQSGAGGQCL*CHKPFKSSXHVWV*SPSWCPLTLTHL 359
Query: 128 HARFW*SIQKASYGLQIQKQASCPMVCNFYPIW 30
HARFW*S+QK+S+ +QIQK+A C MVC +YPIW
Sbjct: 360 HARFW*SVQKSSHDMQIQKRAPCSMVCYYYPIW 458
Score = 24.4 bits (47), Expect(2) = 2e-060
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 460 GPPRXTSCR 486
GPPR TSCR
Sbjct: 27 GPPRRTSCR 1
Score = 24.0 bits (46), Expect(2) = 7e-083
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +2
Query: 485 RHDVXRGGP 459
RHDV RGGP
Sbjct: 2 RHDVRRGGP 28
Score = 22.6 bits (43), Expect(2) = 2e-041
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 484 DMMXGEEDR 458
DMM GEEDR
Sbjct: 3 DMMSGEEDR 29
>gb|BG606256.1|BG606256 WHE2962_F04_L08ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2962_F04_L08, mRNA sequence
Length = 528
Score = 294 bits (636), Expect = 6e-079
Identities = 120/135 (88%), Positives = 125/135 (92%)
Frame = -2 / +1
Query: 409 PFRLMSNHLGVVLTFPVYHADLPSDAKEEDRVAATAGYLGGAFDVESLVENLLRQLAGNQ 230
PFRLMSNHLGVVLTFPVY DLP DAK EDRVAATAGYLGGAFDVESLVENLLRQLAGNQ
Sbjct: 1 PFRLMSNHLGVVLTFPVYLVDLPPDAKVEDRVAATAGYLGGAFDVESLVENLLRQLAGNQ 180
Query: 229 ELVVNVYDVTNISNPLVMYGSEVPLGNPSSSHICMLDFGDPFRKHHMVCRYRNKPHVPWS 50
ELVVNVYDVTN SNPLVMYGSEVPLG PS SH CMLDFGDPFR HHM+CRYR++PHVPWS
Sbjct: 181 ELVVNVYDVTNHSNPLVMYGSEVPLGAPSPSHTCMLDFGDPFRNHHMICRYRSEPHVPWS 360
Query: 49 AISTPSGVFVICMLV 5
AI+TPSGVFVI ML+
Sbjct: 361 AITTPSGVFVILMLI 405
Score = 220 bits (475), Expect = 1e-056
Identities = 98/133 (73%), Positives = 105/133 (78%)
Frame = +3 / -2
Query: 9 SIHMTKTPDGVEIADHGT*GLFLYLQTI*CFLNGSPKSSMQMCDDEGLPRGTSDPYMTRG 188
SI +TKTPDGV IADHGT G LYL +* FLNGSPKSSMQ+C+ EG PRGTSDPYMTRG
Sbjct: 401 SISITKTPDGVVIADHGTWGSLLYLHIM**FLNGSPKSSMQVCEGEGAPRGTSDPYMTRG 222
Query: 189 FEMFVXXXXXXXXXXLPASCLNKFSTNDSTSNAPPRYPAVAATRSSSLASEGRSA**TGK 368
FE FV LPASC NKFST+DSTS APPRYPAVAATRSS+LAS GRS *TG
Sbjct: 221 FEWFVTS*TFTTSS*LPASCRNKFSTSDSTSKAPPRYPAVAATRSSTLASGGRSTR*TGN 42
Query: 369 VNTTPR*FDMSRN 407
V+TTPR*FDMS N
Sbjct: 41 VSTTPR*FDMSLN 3
Score = 211 bits (455), Expect = 6e-054
Identities = 91/134 (67%), Positives = 105/134 (78%)
Frame = +2 / -1
Query: 8 KHTYDKDTRWGRNCRPWDMRLVSVSANHMMLSEWITKI*HADVR**GVAKRNF*SIHDKR 187
KH Y++DTRWG N RPW+M L SVSA H+M+SEWITKI*HA VR G KR+F IHDKR
Sbjct: 402 KHKYNEDTRWGSNSRPWNMGLASVSAYHVMISEWITKI*HAGVRGRGGTKRDFRPIHDKR 223
Query: 188 VRNVCDIINIYHQFLIAS*LPQQIFH**FYIKCSPKVSCGGSNTILLLGIRRKIRMIDRK 367
V VCDIINI+HQ LIAS*LPQQIFH * YI+ + KVS G SNTIL LGIR ++ +DR+
Sbjct: 222 V*MVCDIINIHHQLLIAS*LPQQIFHK*LYIESASKVSGGSSNTILHLGIRGEVDKVDRE 43
Query: 368 SQYDTQVIRHEPEW 409
Q+ QVIRHEPEW
Sbjct: 42 RQHHAQVIRHEPEW 1
Score = 190 bits (410), Expect = 9e-048
Identities = 86/131 (65%), Positives = 91/131 (69%)
Frame = +1 / -3
Query: 16 I*QRHQMG*KLQTMGHEACFCICKPYDAF*MDHQNLACRCAMMRGCQEELLIHT*QEGSK 195
+*+RHQMG* QTM H A FCIC D F*MDHQNLACRCA RG QE L HT*QEG
Sbjct: 394 V*RRHQMG***QTMEHGARFCICISCDDF*MDHQNLACRCARARGHQEGLQTHT*QEGLN 215
Query: 196 CL*HHKHLPPIPDCQLAASTNFPLMILHQMLPQGILRWQQHDPPPWHQKEDPHDRQEKSI 375
L*HHKH PP PDCQLAA+TNFP + LH+ QGI R QQHDPPPWH RQ S
Sbjct: 214 GL*HHKHSPPAPDCQLAAATNFPQVTLHRKRLQGIRR*QQHDPPPWHPGGGRQGRQGTSA 35
Query: 376 RHPGDST*AGM 408
PGDST*A M
Sbjct: 34 PRPGDST*A*M 2
Score = 188 bits (404), Expect = 6e-047
Identities = 89/134 (66%), Positives = 95/134 (70%)
Frame = -3 / +2
Query: 408 HSGSCRITWVSY*LFLSIMRIFLLMPRRRIVLLPPQDTLGEHLM*NH*WKIC*GS*LAIR 229
HSGSCRITW * LS + MPR RIVLL P DTL M*+H WKIC GS*LAIR
Sbjct: 2 HSGSCRITWAWC*RSLSTLSTSPRMPRWRIVLLLPPDTLEALSM*SHLWKICCGS*LAIR 181
Query: 228 NWW*MFMMSQTFRTLLSCMDQKFLLATPHHRTSAC*ILVIHSESIIWFADTETSLMSHGL 49
+WW*MFMMSQT +TLLSCM K LL P RT AC*ILVIHSE I +ADTE S M HGL
Sbjct: 182 SWW*MFMMSQTIQTLLSCMGLKSLLVPPRPRTPAC*ILVIHSEIIT*YADTEASPMFHGL 361
Query: 48 QFLPHLVSLSYVCL 7
LPHLVS Y+CL
Sbjct: 362 LLLPHLVSSLYLCL 403
Score = 186 bits (400), Expect(2) = 2e-046
Identities = 69/100 (69%), Positives = 81/100 (81%)
Frame = -1 / +3
Query: 308 HRRIPWGSI*CRIISGKFVEAASWQSGIGGKCL*CHKHFEPSCHVWIRSSSWQPLIIAHL 129
+RRIPW CR+ GKFV AASWQSG GG+CL*CHK F+PSCHVW+ S SW PL +AHL
Sbjct: 102 YRRIPWRRFRCRVTCGKFVAAASWQSGAGGECL*CHKPFKPSCHVWV*SPSWCPLALAHL 281
Query: 128 HARFW*SIQKASYGLQIQKQASCPMVCNFYPIWCLCHMYA 9
HARFW*SIQK+S+ +QIQK+A C MVC +YPIWCL + YA
Sbjct: 282 HARFW*SIQKSSHDMQIQKRAPCSMVCYYYPIWCLRYTYA 401
Score = 21.7 bits (41), Expect(2) = 2e-046
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +3
Query: 407 IPAHVESPG 381
I AHVESPG
Sbjct: 3 IQAHVESPG 29
>gb|BE417613.1|BE417613 MUG022.G12R990620 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG022.G12, mRNA sequence
Length = 480
Score = 146 bits (313), Expect(2) = 1e-053
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = -2 / +3
Query: 400 LMSNHLGVVLTFPVYHADLPSDAKEEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELV 221
L SNHLGVVLTF VY DLP+DA E RV ATAGYLGGAFDVESLVENLL +LAGNQ+++
Sbjct: 213 LGSNHLGVVLTFAVYRPDLPADASVEQRVEATAGYLGGAFDVESLVENLLSKLAGNQDIL 392
Query: 220 VNVYDVTNISNPLVMYGSEVP 158
VNVYDVTN S P+ MYGS+ P
Sbjct: 393 VNVYDVTNASEPMAMYGSQTP 455
Score = 97.3 bits (206), Expect(2) = 1e-023
Identities = 48/87 (55%), Positives = 54/87 (62%)
Frame = +3 / -3
Query: 135 CDDEGLPRGTSDPYMTRGFEMFVXXXXXXXXXXLPASCLNKFSTNDSTSNAPPRYPAVAA 314
C L G DPYM G E FV LPAS L+KFST+DSTS APPR PAVA+
Sbjct: 478 CKRSTLLSGV*DPYMAIGSEAFVTSYTFTNIS*LPASLLSKFSTSDSTSKAPPR*PAVAS 299
Query: 315 TRSSSLASEGRSA**TGKVNTTPR*FD 395
TR S+ AS GRS T KV+TTP+ FD
Sbjct: 298 TRCSTDASAGRSGRYTAKVSTTPKWFD 218
Score = 84.5 bits (178), Expect(2) = 1e-053
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = -2 / +3
Query: 535 YAPVVYSQETVXYIEGLDMMXGEEDRENILRSRASGKAVLTRPFRLMSNH 386
YAPV++SQ+TV Y+ +DMM GEEDRENILR+R +GK VLT PFRL+ ++
Sbjct: 75 YAPVIFSQDTVSYLARMDMMSGEEDRENILRARETGKPVLTNPFRLLGSN 224
Score = 32.7 bits (65), Expect(2) = 1e-023
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +3 / -3
Query: 399 SRNGRVRTAFPDALDLKIFXXXXXXXXXXXXXXXXTVSCEYTTGAY 536
SRNG V T P +L K+F TVS E TGAY
Sbjct: 211 SRNGFVNTGLPVSLARKMFSRSSSPDIMSMRAR*ETVSWEKITGAY 74
>gb|CV771120.1|CV771120 FGAS065513 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 884
Score = 89.0 bits (188), Expect(2) = 1e-029
Identities = 33/60 (55%), Positives = 48/60 (80%)
Frame = -2 / +1
Query: 376 VLTFPVYHADLPSDAKEEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTN 197
+LT+ VY ++ P++A++++RV A GYLGG FD+E+LV+ LL QLAG Q ++VNVYD TN
Sbjct: 109 ILTYSVYKSEPPANARQQERVQAAIGYLGGIFDIEALVDKLLHQLAGKQSIMVNVYDTTN 288
Score = 61.1 bits (127), Expect(2) = 1e-029
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = -2 / +1
Query: 136 HICMLDFGDPFRKHHMVCRYRNKPHVPWSAISTPSGVFVICMLVG 2
H L+FGDP R+H M CR+ KP +PW AI+ G +VI +L+G
Sbjct: 340 HNSTLNFGDPSRRHEMHCRFMQKPPLPWLAITYSLGAYVIALLIG 474
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 605,046,817
Number of Sequences: 636343
Number of extensions: 10728319
Number of successful extensions: 162574
Number of sequences better than 1.0e-020: 8
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 11880035741
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)