TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF41c07.yg.2.1
(691 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA497978.1|CA497978 WHE3236_G04_N08ZT Wheat meiotic anth... 163 4e-095
gb|BQ902766.1|BQ902766 Ta03_01c07_R Ta03_AAFC_ECORC_Fusariu... 209 1e-086
gb|CA501322.1|CA501322 WHE4032_B11_D22ZT Wheat meiotic anth... 163 2e-077
gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic flor... 212 2e-055
gb|BE498502.1|BE498502 WHE0967_A12_A23ZS Wheat pre-anthesis... 162 5e-053
gb|BU099331.1|BU099331 WHE3306_C03_E06ZS Chinese Spring whe... 121 8e-044
gb|DQ086486.1| Triticum aestivum putative 1,3-beta-glucan s... 119 2e-035
gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: L... 149 3e-035
gb|CA501219.1|CA501219 WHE4030_G09_M18ZT Wheat meiotic anth... 133 1e-030
gb|BQ743211.1|BQ743211 WHE4101_D09_G17ZS Wheat salt-stresse... 118 5e-026
gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA... 115 5e-025
>gb|CA497978.1|CA497978 WHE3236_G04_N08ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3236_G04_N08, mRNA sequence
Length = 633
Score = 163 bits (351), Expect(3) = 4e-095
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = -1 / +3
Query: 637 EYXSKLVXXDVHGKDQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYL 458
EY SKLV D+HGKD+EIY +KLPGNPKLGEG PENQNHA+IFTRG+AVQTIDMNQDNY
Sbjct: 96 EYYSKLVKADIHGKDKEIYSVKLPGNPKLGEGKPENQNHAVIFTRGNAVQTIDMNQDNYF 275
Query: 457 EEAMKMRNLLEEFHNAHGK 401
EEA+KMRNLLEEF HGK
Sbjct: 276 EEALKMRNLLEEFSQNHGK 332
Score = 139 bits (298), Expect(3) = 4e-095
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -1 / +3
Query: 268 LKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQ 98
LKVRMHYGHPDVFDRIFHITRGGISKASR+INISEDI+AGFNSTLRQGNITHHEYIQ
Sbjct: 459 LKVRMHYGHPDVFDRIFHITRGGISKASRIINISEDIFAGFNSTLRQGNITHHEYIQ 629
Score = 95.9 bits (203), Expect(3) = 4e-055
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +3 / -3
Query: 99 WIYSWCVMFPWRKVELNPAYISSLILITRDALLMPPRVM*NIRSKTSGCP*CIRT 263
WIYSW VMFP R+VELNPA ISSLIL+ RDALLMPP V+*NI S TSG P*CI T
Sbjct: 628 WIYSW*VMFP*RRVELNPANISSLILMIRDALLMPPLVI*NILSNTSG*P*CILT 464
Score = 85.8 bits (181), Expect(3) = 4e-095
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = -1 / +3
Query: 400 HGIRKPTILGVREHVFTGSVSSLASFMSKQETSFVTLGQRVLA 272
HG +P+ILGVREHVFTGSVSSLASFMS QETSFVTLGQRVL+
Sbjct: 324 HGKFRPSILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLS 452
Score = 79.9 bits (168), Expect(3) = 4e-055
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +3 / -3
Query: 276 RTRCPKVTKLVSCFDINDASEETLPVNTCSLTPRIVGFRMPCF 404
RTRCP VTKLVS FDIN+A EETLPV TCSLTPRI G +P F
Sbjct: 448 RTRCPNVTKLVS*FDINEAREETLPVKTCSLTPRIEGLNLP*F 320
Score = 79.0 bits (166), Expect(3) = 4e-055
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +2 / -2
Query: 404 SMSIMKFFK*ISHFHCFLQVVILIHIDRLNCISSSEDYGMVLVLRXAFTXLGVPRQFNAV 583
+M + +F K ISHF C L++VILIHI+ L IS+SE Y MVL+ L + QFN +
Sbjct: 329 AMILREFLKQISHFECLLEIVILIHINGLYGISASEYYSMVLIFGFTLPKLWIAGQFNRI 150
Query: 584 YFLVFAMNIXLHXLGXILS 640
FLV +M++ + L ILS
Sbjct: 149 NFLVLSMDVSFNKL*VILS 93
Score = 62.0 bits (129), Expect(3) = 3e-021
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +2 / -2
Query: 98 LDIFMVCDVPLAQSRIEPGIYIFAYINHSRRLANATSGYVKYPIKNIRMSIVHSNFE 268
LDI MV VPL QSR++P YI A I+ + RL AT +KY IK++ ++I+HS+F+
Sbjct: 629 LDILMVSYVPLTQSRVKPCKYILADIDDTGRLTYATPRNMKYSIKHVWVTIMHSHFQ 459
Score = 59.7 bits (124), Expect(3) = 2e-028
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = -3 / +2
Query: 266 QSSNALWTS*CF*SDISHNPRWH*QGVSSD*YKRRYICRVQFDFAPREHHTP*IYPG 96
+S NALW+ * +IS+ WH GV Y+R YICRV A REH++P*+YPG
Sbjct: 461 ESENALWSPRRV**NISYYEGWHK*GVPYHQYQRGYICRV*LYSASREHNSP*VYPG 631
Score = 57.9 bits (120), Expect(3) = 2e-028
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -3 / +2
Query: 602 WQRPRNILH*IAWEPQAX*RXT*EPKPCHNLHSRRCSSDDRYESG*LLGGSNENEKFT*R 423
W+ N+ *IA + +A T + KPC N+HSR+C ++ YESG*L G +NEK *
Sbjct: 131 WKGQGNLFC*IARQSKAWGG*TRKSKPCCNIHSRKCRTNH*YESG*LFRGGTQNEKSA*G 310
Query: 422 IS*CSWK 402
I SW+
Sbjct: 311 ILSKSWQ 331
Score = 50.6 bits (104), Expect(3) = 3e-021
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3 / -3
Query: 420 NSSSKFLIFIASSK*LS*FISIV*TASPRVKIMA 521
NSSS+FLI ASSK*LS*FIS+V TA PRV I A
Sbjct: 313 NSSSRFLILSASSK*LS*FISMVCTAFPRVNITA 212
Score = 46.9 bits (96), Expect(3) = 2e-028
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 404 KTWHTEAHNPRCEGACIHGECLFAGVIYVETGD*FCYFGATCS 276
K+W +A N C C+H +C +YV++G+*FC CS
Sbjct: 320 KSWQVQAFNSWC*RTCLHRKCFLPCFVYVKSGN*FCDIRTACS 448
Score = 27.2 bits (53), Expect(3) = 3e-021
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1 / -1
Query: 274 QEHVAPK*QN*SPVST*MTPAKRHSP*IHAPSHLGLWASVCHVF 405
+EH QN* P T* ++H * H H L A CH F
Sbjct: 450 KEHAVLMSQN*FPDLT*TKQGRKHFR*RHVL*HQELKA*TCHDF 319
>gb|BQ902766.1|BQ902766 Ta03_01c07_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_01c07, mRNA
sequence
Length = 559
Score = 209 bits (451), Expect(3) = 1e-086
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -1 / -2
Query: 268 LKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGK 89
LKVRMHYGHPDVFDRIFHITRGGISKASR+INISEDI+AGFNSTLRQGNITHHEYIQVGK
Sbjct: 342 LKVRMHYGHPDVFDRIFHITRGGISKASRIINISEDIFAGFNSTLRQGNITHHEYIQVGK 163
Query: 88 GRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GRDVGLNQIALFEGKVAGGN EQVLSRD+
Sbjct: 162 GRDVGLNQIALFEGKVAGGNAEQVLSRDI 76
Score = 141 bits (303), Expect(3) = 1e-057
Identities = 65/86 (75%), Positives = 68/86 (79%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LRTCS PPATFPSNSAI PTS P PT IYSW VMFP R+VELNPA ISSLIL+ R
Sbjct: 80 SLLRTCSAFPPATFPSNSAI*LSPTSLPLPT*IYSW*VMFP*RRVELNPANISSLILMIR 259
Query: 186 DALLMPPRVM*NIRSKTSGCP*CIRT 263
DALLMPP V+*NI S TSG P*CI T
Sbjct: 260 DALLMPPLVI*NILSNTSG*P*CILT 337
Score = 95.9 bits (203), Expect(2) = 1e-024
Identities = 41/89 (46%), Positives = 64/89 (71%)
Frame = +2 / +1
Query: 2 HISAENLLTIASSNFPLK*CNLVQANITPFPHLDIFMVCDVPLAQSRIEPGIYIFAYINH 181
+ISA+NL ++S NF K*C+L++ NI+ F +L+I MV VPL QSR++P YI I+
Sbjct: 76 YISAKNLFGVSSRNFSFK*CDLIKPNISSFTNLNILMVSYVPLTQSRVKPCKYILTDIDD 255
Query: 182 SRRLANATSGYVKYPIKNIRMSIVHSNFE 268
+ RL +AT +KY IK++ ++I+HS+F+
Sbjct: 256 TGRLTDATPRNMKYSIKHVWVTIMHSHFQ 342
Score = 87.2 bits (184), Expect(3) = 1e-086
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = -1 / -2
Query: 400 HGIRKPTILGVREHVFTGSVSSLASFMSKQETSFVTLGQRVLA 272
HG KP+ILGVREHVFTGSVSSLASFMS QETSFVTLGQRVL+
Sbjct: 477 HGKFKPSILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLS 349
Score = 79.9 bits (168), Expect(3) = 1e-057
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +3 / +2
Query: 276 RTRCPKVTKLVSCFDINDASEETLPVNTCSLTPRIVGFRMPCF 404
RTRCP VTKLVS FDIN+A EETLPV TCSLTPRI G +P F
Sbjct: 353 RTRCPNVTKLVS*FDINEAREETLPVKTCSLTPRIEGLNLP*F 481
Score = 67.0 bits (140), Expect(3) = 6e-021
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = -3 / -1
Query: 266 QSSNALWTS*CF*SDISHNPRWH*QGVSSD*YKRRYICRVQFDFAPREHHTP*IYPGGER 87
+S NALW+ * +IS+ WH GV Y+ YICRV A REH++P*+Y G R
Sbjct: 340 ESENALWSPRRV**NISYYEGWHQ*GVPYHQYQ*GYICRV*LYSASREHNSP*VYSGW*R 161
Query: 86 A*CWLEPNCTI*GESCWRQW*ASS 15
CW + TI* +SC R+ SS
Sbjct: 160 KRCWA*SDRTI*RKSCGRKRRTSS 89
Score = 63.4 bits (132), Expect(3) = 1e-086
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 490 QTIDMNQDNYLEEAMKMRNLLEEFHNAHGK 401
QTIDMNQDNY EEA+KMRNLLEEF HGK
Sbjct: 558 QTIDMNQDNYFEEALKMRNLLEEFSQNHGK 469
Score = 43.2 bits (88), Expect(3) = 6e-021
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 404 KTWHTEAHNPRCEGACIHGECLFAGVIYVETGD*F 300
K+W +A NP C C+H +C +YV++G+*F
Sbjct: 481 KSWQVQAFNPWC*RTCLHWKCFLPRFVYVKSGN*F 377
Score = 41.4 bits (84), Expect(3) = 1e-057
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3 / +2
Query: 420 NSSSKFLIFIASSK*LS*FISIV 488
NSSS+FLIF ASSK*LS*FIS+V
Sbjct: 488 NSSSRFLIFSASSK*LS*FISMV 556
Score = 39.6 bits (80), Expect(2) = 1e-024
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / +1
Query: 404 SMSIMKFFK*ISHFHCFLQVVILIHIDRL 490
+M + +F K ISHF C L++VILIHI+ L
Sbjct: 472 AMILREFLKQISHF*CLLEIVILIHINGL 558
Score = 28.6 bits (56), Expect(3) = 6e-021
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3 / -1
Query: 479 YESG*LLGGSNENEKFT*RIS*CSWK 402
YESG*L G +NEK * I SW+
Sbjct: 547 YESG*LFRGGTKNEKSA*GILSKSWQ 470
>gb|CA501322.1|CA501322 WHE4032_B11_D22ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4032_B11_D22, mRNA sequence
Length = 749
Score = 163 bits (351), Expect(3) = 2e-077
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = -1 / +1
Query: 637 EYXSKLVXXDVHGKDQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYL 458
EY SKLV D+HGKD+EIY +KLPGNPKLGEG PENQNHA+IFTRG+AVQTIDMNQDNY
Sbjct: 289 EYYSKLVKADIHGKDKEIYSVKLPGNPKLGEGKPENQNHAVIFTRGNAVQTIDMNQDNYF 468
Query: 457 EEAMKMRNLLEEFHNAHGK 401
EEA+KMRNLLEEF HGK
Sbjct: 469 EEALKMRNLLEEFSQNHGK 525
Score = 85.8 bits (181), Expect(3) = 2e-077
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = -1 / +1
Query: 400 HGIRKPTILGVREHVFTGSVSSLASFMSKQETSFVTLGQRVLA 272
HG +P+ILGVREHVFTGSVSSLASFMS QETSFVTLGQRVL+
Sbjct: 517 HGKFRPSILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLS 645
Score = 80.3 bits (169), Expect(3) = 2e-077
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -1 / +1
Query: 268 LKVRMHYGHPDVFDRIFHITRGGISKASRVIN 173
LKVRMHYGHPDVFDRIFHITRGGISKASR+IN
Sbjct: 652 LKVRMHYGHPDVFDRIFHITRGGISKASRIIN 747
Score = 79.9 bits (168), Expect(3) = 3e-041
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +3 / -1
Query: 276 RTRCPKVTKLVSCFDINDASEETLPVNTCSLTPRIVGFRMPCF 404
RTRCP VTKLVS FDIN+A EETLPV TCSLTPRI G +P F
Sbjct: 641 RTRCPNVTKLVS*FDINEAREETLPVKTCSLTPRIEGLNLP*F 513
Score = 79.0 bits (166), Expect(3) = 3e-041
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +2 / -3
Query: 404 SMSIMKFFK*ISHFHCFLQVVILIHIDRLNCISSSEDYGMVLVLRXAFTXLGVPRQFNAV 583
+M + +F K ISHF C L++VILIHI+ L IS+SE Y MVL+ L + QFN +
Sbjct: 522 AMILREFLKQISHFECLLEIVILIHINGLYGISASEYYSMVLIFGFTLPKLWIAGQFNRI 343
Query: 584 YFLVFAMNIXLHXLGXILS 640
FLV +M++ + L ILS
Sbjct: 342 NFLVLSMDVSFNKL*VILS 286
Score = 49.2 bits (101), Expect(3) = 3e-041
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3 / -1
Query: 171 ILITRDALLMPPRVM*NIRSKTSGCP*CIRT 263
IL+ RDALLMPP V+*NI S TSG P*CI T
Sbjct: 749 ILMIRDALLMPPLVI*NILSNTSG*P*CILT 657
>gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4354_C05_F10, mRNA sequence
Length = 779
Score = 212 bits (457), Expect(2) = 2e-055
Identities = 86/89 (96%), Positives = 89/89 (100%)
Frame = -1 / +1
Query: 268 LKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGK 89
LKVRMHYGHPDVFDRIFHITRGGISKASR+INISEDI+AGFNSTLRQGNITHHEYIQVGK
Sbjct: 70 LKVRMHYGHPDVFDRIFHITRGGISKASRIINISEDIFAGFNSTLRQGNITHHEYIQVGK 249
Query: 88 GRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GRDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 250 GRDVGLNQIALFEGKVAGGNGEQVLSRDI 336
Score = 152 bits (326), Expect(2) = 8e-038
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LRTCSP PPATFPSNSAI PTS P PTWIYSW VMFP R+VELNPA ISSLIL+ R
Sbjct: 332 SLLRTCSPFPPATFPSNSAI*LSPTSLPLPTWIYSW*VMFP*RRVELNPANISSLILMIR 153
Query: 186 DALLMPPRVM*NIRSKTSGCP*CIRT 263
DALLMPP V+*NI S TSG P*CI T
Sbjct: 152 DALLMPPLVI*NILSNTSG*P*CILT 75
Score = 25.8 bits (50), Expect(2) = 8e-038
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 276 RTRCPKVTKLVSCF 317
RTRCP VTKL F
Sbjct: 59 RTRCPNVTKLAREF 18
Score = 24.9 bits (48), Expect(2) = 2e-055
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 304 SFVTLGQRVLA 272
SFVTLGQRVL+
Sbjct: 31 SFVTLGQRVLS 63
>gb|BE498502.1|BE498502 WHE0967_A12_A23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0967_A12_A23, mRNA sequence
Length = 559
Score = 162 bits (348), Expect(2) = 5e-053
Identities = 65/78 (83%), Positives = 68/78 (87%)
Frame = -1 / +2
Query: 637 EYXSKLVXXDVHGKDQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYL 458
EY SKLV D+HGKDQEIY IKLP NPKLGEG PENQNHAIIFTRGDA+QTIDMNQDNYL
Sbjct: 248 EYHSKLVKADIHGKDQEIYSIKLPXNPKLGEGKPENQNHAIIFTRGDAIQTIDMNQDNYL 427
Query: 457 EEAMKMRNLLEEFHNAHG 404
EEAMK+RN LEEF HG
Sbjct: 428 EEAMKVRNXLEEFRGNHG 481
Score = 127 bits (272), Expect(2) = 1e-040
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 401 FSMSIMKFFK*ISHFHCFLQVVILIHIDRLNCISSSEDYGMVLVLRXAFTXLGVPRQFNA 580
+SM KFFK I HFHC LQVVILIHIDRL CIS+S++Y M+LV R T LGV RQFN
Sbjct: 484 YSMVTTKFFKXIPHFHCLLQVVILIHIDRLYCISTSKNYSMILVFRFPLTKLGVXRQFNG 305
Query: 581 VYFLVFAMNIXLHXLGXIL 637
VYFL+F++NI LH LG IL
Sbjct: 304 VYFLIFSVNISLHELGMIL 248
Score = 104 bits (222), Expect(2) = 7e-033
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = -3 / +1
Query: 638 RVXXQAXXX*CSWQRPRNILH*IAWEPQAX*RXT*EPKPCHNLHSRRCSSDDRYESG*LL 459
RV QA * S +R RNILH* A EPQA * T*+PK C+N +S RC++DDRYESG*LL
Sbjct: 247 RVSFQAREG*YSRKRSRNILH*TAXEPQAW*GET*KPKSCYNFYSWRCNTDDRYESG*LL 426
Query: 458 GGSNENEKFT*RIS*CSWKT 399
GG NE+E+ T*RIS W T
Sbjct: 427 GGGNESEEXT*RISW*PWNT 486
Score = 88.6 bits (187), Expect(2) = 1e-021
Identities = 43/79 (54%), Positives = 51/79 (64%)
Frame = -2 / +3
Query: 639 ESIXPSXXXXMFMAKTKKYTALNCLGTPSXVKAXLRTKTMP*SSLEEMQFXXXXXXXITT 460
+SI PS +F K KKYT LNCL TPS V+ L+TK M * L EMQ+ ITT
Sbjct: 246 KSIIPSS*RLIFTEKIKKYTPLNCLXTPSLVRGNLKTKIML*FLLVEMQYRRSI*IRITT 425
Query: 459 WRKQ*K*EIYLKNFIMLME 403
WR+Q*K* YLKNF++ ME
Sbjct: 426 WRRQ*K*GXYLKNFVVTME 482
Score = 66.6 bits (139), Expect(2) = 5e-053
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1 / +2
Query: 406 GKHGIRKPTILGVREHVFTGSVSSLASFMS 317
G HGIR PTILGVREHVFTGSVSSLASFMS
Sbjct: 470 GNHGIRYPTILGVREHVFTGSVSSLASFMS 559
Score = 59.7 bits (124), Expect(2) = 1e-040
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / -2
Query: 318 DINDASEETLPVNTCSLTPRIVGFRMPCFP 407
DINDASE+TLPVNTCS TPRIVG R+P P
Sbjct: 558 DINDASEDTLPVNTCSRTPRIVG*RIPWLP 469
Score = 57.0 bits (118), Expect(2) = 7e-033
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3 / +1
Query: 410 SWKTWHTEAHNPRCEGACIHGECLFAGVIYV 318
SW W+T +HN C GAC++G+C+FAG+IYV
Sbjct: 466 SW*PWNTLSHNSWCAGACVYGKCVFAGIIYV 558
Score = 57.0 bits (118), Expect(3) = 3e-026
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +3 / -2
Query: 420 NSSSKFLIFIASSK*LS*FISIV*TASPRVKIMA 521
NSSS FL FIASSK*LS*FISIV ASPRVKI+A
Sbjct: 465 NSSSXFLTFIASSK*LS*FISIVCIASPRVKIIA 364
Score = 50.6 bits (104), Expect(3) = 3e-026
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +1 / -3
Query: 526 FGSQVCLHXAWGSQAI*CSIFLGLCHEHXXXXAWXNTL 639
FG QV H AWGSQA+* SIFL L E+ AW +TL
Sbjct: 359 FGFQVSPHQAWGSQAV*WSIFLDLFREYQPSRAWNDTL 246
Score = 49.2 bits (101), Expect(3) = 3e-026
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 317 RHK*RQRRDTPREYMLPHT*DCGLPYAMFSMSIMK 421
RHK* QRR T R++MLPHT +CG+ Y+M + K
Sbjct: 559 RHK*CQRRHTSRKHMLPHTKNCGITYSMVTTKFFK 455
Score = 35.0 bits (70), Expect(2) = 1e-021
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -2 / +3
Query: 399 MAYGSPQS*V*GSMYSRGVSLRWRHLC 319
M Y PQ V GSM R V LRW HLC
Sbjct: 477 MEYVIPQFLVCGSMCLREVCLRWHHLC 557
>gb|BU099331.1|BU099331 WHE3306_C03_E06ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3306_C03_E06,
mRNA sequence
Length = 646
Score = 121 bits (259), Expect(2) = 8e-044
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = -1 / +1
Query: 595 DQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEF 419
DQEIY IKLPG P +GEG PENQNHAIIFTRG+A+QTIDMNQDNYLEEA KMRN+L+EF
Sbjct: 325 DQEIYRIKLPGPPIIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAYKMRNVLQEF 501
Score = 76.7 bits (161), Expect(2) = 8e-044
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = -1 / +1
Query: 385 PTILGVREHVFTGSVSSLASFMSKQETSFVTLGQRVLA 272
PTILG+REH+FTGSVSSLA FMS QETSFVT+GQR LA
Sbjct: 526 PTILGLREHIFTGSVSSLAGFMSYQETSFVTIGQRFLA 639
>gb|DQ086486.1| Triticum aestivum putative 1,3-beta-glucan synthase 10 (GSL10)
mRNA, partial cds
Length = 550
Score = 119 bits (254), Expect(2) = 2e-035
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = -1 / +1
Query: 595 DQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEF 419
DQEIY IKLPG P +GEG PENQ+HAIIFTRG+A+QTIDMNQDNYLEEA KMRN+L+EF
Sbjct: 277 DQEIYRIKLPGPPIIGEGKPENQDHAIIFTRGEALQTIDMNQDNYLEEAYKMRNVLQEF 453
Score = 50.6 bits (104), Expect(2) = 2e-035
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1 / +1
Query: 385 PTILGVREHVFTGSVSSLASFMS 317
PTILG+REH+FTGSVSSLA FMS
Sbjct: 478 PTILGLREHIFTGSVSSLAGFMS 546
>gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1087
Score = 149 bits (320), Expect = 3e-035
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = -1 / +1
Query: 235 VFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIAL 56
VF R++ +TRGG+SKASRVINISEDI+ GFN TLR GN++HHEYIQVGKGRDVGLNQI++
Sbjct: 16 VFXRLWFLTRGGLSKASRVINISEDIFPGFNCTLRGGNVSHHEYIQVGKGRDVGLNQISM 195
Query: 55 FEGKVAGGNGEQVLSRDV 2
FE KV+ GNGEQ LSRD+
Sbjct: 196 FEAKVSSGNGEQTLSRDI 249
Score = 102 bits (218), Expect = 4e-021
Identities = 46/77 (59%), Positives = 51/77 (66%)
Frame = +3 / -3
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L CSPLP T SN I PTSRP PTW+YSW + FP R+V+L P +SSLILIT
Sbjct: 245 SLLNVCSPLPLDTLASNIDI*LSPTSRPLPTWMYSWWLTFPPRRVQLKPGNMSSLILITL 66
Query: 186 DALLMPPRVM*NIRSKT 236
DALL PPRV RS T
Sbjct: 65 DALLKPPRVRNQRRSXT 15
>gb|CA501219.1|CA501219 WHE4030_G09_M18ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4030_G09_M18, mRNA sequence
Length = 522
Score = 133 bits (286), Expect = 1e-030
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAY 158
TSRLRTCSPLPPATFPSN AIWFKPTSRPFPTWIYSWCV+ PWR+VELNPAY
Sbjct: 179 TSRLRTCSPLPPATFPSNRAIWFKPTSRPFPTWIYSWCVILPWRRVELNPAY 334
Score = 126 bits (270), Expect = 2e-028
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -1 / -1
Query: 157 YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 333 YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 178
>gb|BQ743211.1|BQ743211 WHE4101_D09_G17ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_D09_G17, mRNA sequence
Length = 705
Score = 118 bits (253), Expect = 5e-026
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 595 DQEIYCIKLPGNPKLGEGXPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEE 422
DQEIY IKLPG P +GEG PENQNHAIIFTRG+A+QTIDMNQDNYLEEA KMRN+L+E
Sbjct: 531 DQEIYRIKLPGPPIIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAYKMRNVLQE 704
>gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 5', mRNA sequence
Length = 425
Score = 115 bits (246), Expect = 5e-025
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1 / +2
Query: 145 NSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
NSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 23 NSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDI 166
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 603,749,799
Number of Sequences: 636343
Number of extensions: 9035623
Number of successful extensions: 78150
Number of sequences better than 1.0e-020: 13
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 15608953184
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)