TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF13b04.yg.2.1
(370 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum... 222 1e-057
gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan s... 222 1e-057
gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic flor... 219 1e-056
gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA... 183 8e-046
gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. du... 182 1e-045
gb|CD925510.1|CD925510 G750.117H07F010711 G750 Triticum aes... 159 4e-039
gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan s... 144 3e-034
gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: L... 144 4e-034
gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aes... 142 1e-033
gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA... 138 3e-032
gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusar... 137 5e-032
gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium gra... 111 3e-029
gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis... 111 3e-024
gb|CA665056.1|CA665056 wlk1.pk0011.c3 wlk1 Triticum aestivu... 106 2e-022
gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA... 104 4e-022
gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aes... 100 5e-021
gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium gra... 100 1e-020
>gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum cDNA clone TaE15017C07R, mRNA
sequence
Length = 653
Score = 222 bits (480), Expect = 1e-057
Identities = 93/111 (83%), Positives = 96/111 (86%)
Frame = +3 / +2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNRADI TQFLFQIGVFTA+PMILGFILE G
Sbjct: 221 YIFLYGKTYLALSGVGESIQNRADIQGNKALSVALNTQFLFQIGVFTAIPMILGFILEEG 400
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
VLTAFV FITMQFQ+CS+FFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 401 VLTAFVSFITMQFQLCSIFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 553
Score = 204 bits (439), Expect = 5e-052
Identities = 87/111 (78%), Positives = 92/111 (82%)
Frame = -1 / -3
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVALYFAPPC+I RPK* VLVP E VKN EH WNCIV+ TKAV+TP SRMKPRI
Sbjct: 552 TTKPLPVALYFAPPCSIVRPK**VLVPRENVKNMEHSWNCIVMKLTKAVRTPSSRMKPRI 373
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
+G AVNTPIWKRN VFRA A F ISALF*IDSPTPDKAR + P*RNMY
Sbjct: 372 IGIAVNTPIWKRNWVFRATLNALFPCISALF*IDSPTPDKAR*VLP*RNMY 220
Score = 189 bits (408), Expect = 9e-048
Identities = 73/113 (64%), Positives = 87/113 (76%)
Frame = +2 / +1
Query: 17 VHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IR 196
VHISLW N+SG IWCWRINSK* GYT + S+E SEH +SFPDWC+YC S+DS FHP R
Sbjct: 220 VHISLW*NLSGFIWCWRINSK*GGYTGK*SIERGSEHPVSFPDWCVYCNSYDSRFHPGRR 399
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SNR*RFCGTS 355
C +GFC ++Y AVP +L IF+ L+WNK+ L W N WRCKV*SN * FCGT+
Sbjct: 400 CPDGFC*LHYYAVPTMLHIFHVLSWNKDSLFWSHNTAWRCKV*SNW*GFCGTA 558
Score = 165 bits (355), Expect = 2e-040
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / -2
Query: 350 YHKTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETKN 171
YHKT T CSILCTSM YC K+V CSK E +KY A LELH N+ NKSR +T F+DET N
Sbjct: 553 YHKTPTSCSILCTSMQYCATKIVSPCSKREREKYGA*LELHSNEANKSRQDTFFQDET*N 374
Query: 170 HGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
H N SK+TNLEKKL VQS Q + YIR ILN*FSNTR* QI F IEKYV
Sbjct: 373 HRNCSKHTNLEKKLGVQSHAQCFISLYIRPILN*FSNTR*SQISFTIEKYV 221
Score = 157 bits (337), Expect = 6e-038
Identities = 75/112 (66%), Positives = 81/112 (72%)
Frame = -2 / -1
Query: 351 VPQNLYRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQE 172
VPQN Y+LLYTLHLH +L Q+S LFQ R *KI S GTA **+ QKP HL+ G*N E
Sbjct: 554 VPQNPYQLLYTLHLHAVLCDQNSESLFQERT*KIWSIVGTA***S*QKPSGHLLPG*NLE 375
Query: 171 SWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
S E Q* HQSGKE CSE S L VYP YFELILQHQI+PD F HREICT
Sbjct: 374 S*ELQ*THQSGKETGCSEPRSMLYFPVYPPYFELILQHQIKPDKFYHREICT 219
Score = 63.8 bits (133), Expect(2) = 3e-022
Identities = 33/53 (62%), Positives = 35/53 (66%)
Frame = +1 / +3
Query: 193 QVF*RLLFSLLQCSSKCALYFLLSHLEQEPTTLAVQYYMEVQSIEQPVEVLWY 351
+V *RLL + L CSS A YF S LEQ T L QY MEVQSIEQ V VLWY
Sbjct: 396 KVS*RLLLASLLCSSNYAPYFSRSLLEQGLTILVAQYCMEVQSIEQLVGVLWY 554
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +1 / +3
Query: 19 TYFSMGKCIWPYLVLENQFKIERIYCRTQP*MLL*TLNFFSR 144
TYFSM K IW YLVLENQFKI RIY + * L*T +FFSR
Sbjct: 222 TYFSMVKLIWLYLVLENQFKIGRIYREIKH*AWL*TPSFFSR 347
>gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan synthase 8 (GSL8) mRNA,
partial cds
Length = 580
Score = 222 bits (480), Expect = 1e-057
Identities = 93/111 (83%), Positives = 96/111 (86%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNRADI TQFLFQIGVFTA+PMILGFILE G
Sbjct: 177 YIFLYGKTYLALSGVGESIQNRADIQGNKALSVALNTQFLFQIGVFTAIPMILGFILEEG 356
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
VLTAFV FITMQFQ+CS+FFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 357 VLTAFVSFITMQFQLCSIFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 509
Score = 204 bits (439), Expect = 5e-052
Identities = 87/111 (78%), Positives = 92/111 (82%)
Frame = -1 / -1
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVALYFAPPC+I RPK* VLVP E VKN EH WNCIV+ TKAV+TP SRMKPRI
Sbjct: 508 TTKPLPVALYFAPPCSIVRPK**VLVPRENVKNMEHSWNCIVMKLTKAVRTPSSRMKPRI 329
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
+G AVNTPIWKRN VFRA A F ISALF*IDSPTPDKAR + P*RNMY
Sbjct: 328 IGIAVNTPIWKRNWVFRATLNALFPCISALF*IDSPTPDKAR*VLP*RNMY 176
Score = 189 bits (408), Expect = 9e-048
Identities = 73/113 (64%), Positives = 87/113 (76%)
Frame = +2 / +2
Query: 17 VHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IR 196
VHISLW N+SG IWCWRINSK* GYT + S+E SEH +SFPDWC+YC S+DS FHP R
Sbjct: 176 VHISLW*NLSGFIWCWRINSK*GGYTGK*SIERGSEHPVSFPDWCVYCNSYDSRFHPGRR 355
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SNR*RFCGTS 355
C +GFC ++Y AVP +L IF+ L+WNK+ L W N WRCKV*SN * FCGT+
Sbjct: 356 CPDGFC*LHYYAVPTMLHIFHVLSWNKDSLFWSHNTAWRCKV*SNW*GFCGTA 514
Score = 165 bits (355), Expect = 2e-040
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / -3
Query: 350 YHKTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETKN 171
YHKT T CSILCTSM YC K+V CSK E +KY A LELH N+ NKSR +T F+DET N
Sbjct: 509 YHKTPTSCSILCTSMQYCATKIVSPCSKREREKYGA*LELHSNEANKSRQDTFFQDET*N 330
Query: 170 HGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
H N SK+TNLEKKL VQS Q + YIR ILN*FSNTR* QI F IEKYV
Sbjct: 329 HRNCSKHTNLEKKLGVQSHAQCFISLYIRPILN*FSNTR*SQISFTIEKYV 177
Score = 157 bits (337), Expect = 6e-038
Identities = 75/112 (66%), Positives = 81/112 (72%)
Frame = -2 / -2
Query: 351 VPQNLYRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQE 172
VPQN Y+LLYTLHLH +L Q+S LFQ R *KI S GTA **+ QKP HL+ G*N E
Sbjct: 510 VPQNPYQLLYTLHLHAVLCDQNSESLFQERT*KIWSIVGTA***S*QKPSGHLLPG*NLE 331
Query: 171 SWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
S E Q* HQSGKE CSE S L VYP YFELILQHQI+PD F HREICT
Sbjct: 330 S*ELQ*THQSGKETGCSEPRSMLYFPVYPPYFELILQHQIKPDKFYHREICT 175
Score = 63.8 bits (133), Expect(2) = 2e-022
Identities = 33/53 (62%), Positives = 35/53 (66%)
Frame = +1 / +1
Query: 193 QVF*RLLFSLLQCSSKCALYFLLSHLEQEPTTLAVQYYMEVQSIEQPVEVLWY 351
+V *RLL + L CSS A YF S LEQ T L QY MEVQSIEQ V VLWY
Sbjct: 352 KVS*RLLLASLLCSSNYAPYFSRSLLEQGLTILVAQYCMEVQSIEQLVGVLWY 510
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 19 TYFSMGKCIWPYLVLENQFKIERIYCRTQP*MLL*TLNFFSR 144
TYFSM K IW YLVLENQFKI RIY + * L*T +FFSR
Sbjct: 178 TYFSMVKLIWLYLVLENQFKIGRIYREIKH*AWL*TPSFFSR 303
>gb|CF133118.1|CF133118 WHE4354_C05_F10ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4354_C05_F10, mRNA sequence
Length = 779
Score = 219 bits (473), Expect = 1e-056
Identities = 92/109 (84%), Positives = 94/109 (86%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNRADI TQFLFQIGVFTA+PMILGFILE G
Sbjct: 436 YIFLYGKTYLALSGVGESIQNRADIQGNKALSVALHTQFLFQIGVFTAIPMILGFILEEG 615
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGF 344
VLTAFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAKYRATGRGF
Sbjct: 616 VLTAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGF 762
Score = 196 bits (422), Expect = 1e-049
Identities = 84/108 (77%), Positives = 89/108 (82%)
Frame = -1 / -1
Query: 340 PLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRIMGT 161
PLPVALYFAPPC+I RPK* VLVP E VKNTEH WNCIV+ TKAV+TP SRMKPRI+G
Sbjct: 758 PLPVALYFAPPCSIVRPK**VLVPRENVKNTEHSWNCIVMKLTKAVRTPSSRMKPRIIGI 579
Query: 160 AVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
AVNTPIWKRN V RA A F ISALF*IDSPTPDKAR + P*RNMY
Sbjct: 578 AVNTPIWKRNWVCRATLNALFPCISALF*IDSPTPDKAR*VLP*RNMY 435
Score = 179 bits (386), Expect = 1e-044
Identities = 67/105 (63%), Positives = 81/105 (77%)
Frame = +2 / +3
Query: 17 VHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IR 196
VHISLW N+SG IWCWRINSK* GYT + S+E S H +SFPDWC+YC S+DS FHP R
Sbjct: 435 VHISLW*NLSGFIWCWRINSK*GGYTGK*SIERGSAHPVSFPDWCVYCNSYDSRFHPGRR 614
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SN 331
C +GFC ++Y AVP +LCIF+ L+W+K+ L W N WRCKV*SN
Sbjct: 615 CPDGFC*LHYYAVPTMLCIFHVLSWDKDSLFWSHNTAWRCKV*SN 749
Score = 157 bits (337), Expect = 6e-038
Identities = 73/112 (65%), Positives = 80/112 (71%)
Frame = -3 / -3
Query: 353 RYHKTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETK 174
R K T CSILCTSM YC K+V C K E +KYRA LELH N+ NKSR +T F+DET
Sbjct: 771 RTTKPPTSCSILCTSMQYCATKIVSPCPKREREKYRA*LELHSNEANKSRQDTFFQDET* 592
Query: 173 NHGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
NH N SK+TNLEKKL VQS Q + YIR ILN*FSNTR* QI F IEKYV
Sbjct: 591 NHRNCSKHTNLEKKLGVQSHAQCFISLYIRPILN*FSNTR*SQISFTIEKYV 436
Score = 146 bits (314), Expect = 8e-035
Identities = 70/107 (65%), Positives = 77/107 (71%)
Frame = -2 / -2
Query: 336 YRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQESWEQQ 157
Y+LLYTLHLH +L Q+S L Q R *KIQS GTA **+ QKP HL+ G*N ES E Q
Sbjct: 754 YQLLYTLHLHAVLCDQNSESLSQERT*KIQSIVGTA***S*QKPSGHLLPG*NLES*ELQ 575
Query: 156 *IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
* HQSGKE C+E S L VYP YFELILQHQI+PD F HREICT
Sbjct: 574 *THQSGKETGCAEPRSMLYFPVYPPYFELILQHQIKPDKFYHREICT 434
>gb|BJ269461.1|BJ269461 BJ269461 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 5', mRNA sequence
Length = 628
Score = 183 bits (394), Expect = 8e-046
Identities = 77/111 (69%), Positives = 84/111 (75%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYG++YLALSG+ SI +A QFL QIGVFTAVPMI+GFILE G
Sbjct: 193 YIFLYGRVYLALSGLDHSISRQARFLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELG 372
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
++ A FITMQ Q CSVFFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 373 LMKAIFSFITMQLQFCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 525
Score = 113 bits (242), Expect = 7e-025
Identities = 54/84 (64%), Positives = 61/84 (72%)
Frame = -1 / -3
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKP PVA YFAPP I PK* VLVPSEKVKNTE +CIVI A +P+S+MKP I
Sbjct: 524 TTKPRPVARYFAPP*RIVLPK*CVLVPSEKVKNTEQNCSCIVIKLKIAFISPNSKMKPII 345
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAF 98
+GTAV TPI +N* FRAA +A F
Sbjct: 344 IGTAVKTPI*TKN*AFRAASRAVF 273
>gb|AJ611269.1|AJ611269 AJ611269 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04551R, mRNA
sequence
Length = 500
Score = 182 bits (392), Expect = 1e-045
Identities = 76/111 (68%), Positives = 84/111 (75%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYG++YLALSG+ SI +A QFL QIG+FTAVPMI+GFILE G
Sbjct: 7 YIFLYGRVYLALSGLDHSISRQARFLGNTALDAALNAQFLVQIGIFTAVPMIMGFILELG 186
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
++ A FITMQ Q CSVFFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 187 LMKAIFSFITMQLQXCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 339
Score = 111 bits (237), Expect = 3e-024
Identities = 53/84 (63%), Positives = 60/84 (71%)
Frame = -1 / -1
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKP PVA YFAPP I PK* VLVPSEKVKNTE +CIVI A +P+S+MKP I
Sbjct: 338 TTKPRPVARYFAPP*RIVLPK*CVLVPSEKVKNTEXXCSCIVIKLKIAFISPNSKMKPII 159
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAF 98
+GTAV PI +N* FRAA +A F
Sbjct: 158 IGTAVKIPI*TKN*AFRAASRAVF 87
>gb|CD925510.1|CD925510 G750.117H07F010711 G750 Triticum aestivum cDNA clone G750117H07,
mRNA sequence
Length = 575
Score = 159 bits (342), Expect(2) = 4e-039
Identities = 67/101 (66%), Positives = 74/101 (73%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYG++YLALSG+ SI +A QFL QIGVFTAVPMI+GFILE G
Sbjct: 160 YIFLYGRVYLALSGLDHSISRQARFLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELG 339
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
++ A FITMQ Q CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 340 LMKAIFSFITMQLQFCSVFFTFSLGTRTHYFGRTILHGGAK 462
Score = 20.8 bits (39), Expect(2) = 4e-039
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 318 KYRATGRG 341
+YRATGRG
Sbjct: 532 QYRATGRG 555
>gb|DQ086489.1| Triticum aestivum putative 1,3-beta-glucan synthase 22 (GSL22)
mRNA, partial cds
Length = 433
Score = 144 bits (310), Expect = 3e-034
Identities = 60/111 (54%), Positives = 74/111 (66%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ E I QF+ Q+G+FTA+PMI+ LE G
Sbjct: 79 YAFVWGRFYLALSGLEEYITKNTSTTNNAALGAVLNQQFVIQLGLFTALPMIIENSLEHG 258
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F+ MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 259 FLNAVWDFLKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 411
>gb|DR736451.1|DR736451 FGAS081821 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1087
Score = 144 bits (309), Expect = 4e-034
Identities = 61/111 (54%), Positives = 75/111 (67%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G FTA+PMIL LE G
Sbjct: 349 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGFFTALPMILENSLELG 528
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 529 FLPAVWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 681
>gb|CD886203.1|CD886203 G118.101K08F010601 G118 Triticum aestivum cDNA clone G118101K08,
mRNA sequence
Length = 602
Score = 142 bits (305), Expect = 1e-033
Identities = 60/112 (53%), Positives = 74/112 (66%)
Frame = +3 / +3
Query: 15 RYIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILES 194
R F++G+ YLALSG+ E I QF+ Q+G+FTA+PMI+ LE
Sbjct: 6 RPAFVWGRFYLALSGLEEYITKNTSTTNNAALGAVLNQQFVIQLGLFTALPMIIENSLEH 185
Query: 195 GVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
G L A F+ MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 186 GFLNAVWDFLKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 341
>gb|BJ243965.1|BJ243965 BJ243965 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13j08 5', mRNA sequence
Length = 605
Score = 138 bits (295), Expect = 3e-032
Identities = 58/108 (53%), Positives = 72/108 (66%)
Frame = +3 / +2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G FTA+PMIL LE G
Sbjct: 161 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGFFTALPMILENSLELG 340
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRG 341
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRG
Sbjct: 341 FLPAVWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRG 484
>gb|BE585656.1|BE585656 EST#6PSP6_B03_b3_025 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST#6PSP6_B03_b3_025, mRNA sequence
Length = 695
Score = 137 bits (294), Expect = 5e-032
Identities = 59/106 (55%), Positives = 71/106 (66%)
Frame = +3 / +2
Query: 33 GKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAF 212
G++YLALSG+ IQ A+ QF+ Q+G FTA+PMIL LE G L A
Sbjct: 8 GRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGFFTALPMILENSLELGFLPAV 187
Query: 213 VQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 188 WDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 325
>gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2635_H07_P13,
mRNA sequence
Length = 514
Score = 111 bits (237), Expect(2) = 3e-029
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +3 / +2
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q Q+G A+PM++ LE G TA F+ MQ Q+ SVFFTFSLGT+THY+G+ +L
Sbjct: 116 SQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGKTLL 295
Query: 306 HGGAKYRATGRGFVV 350
HGGA+YRATGRGFVV
Sbjct: 296 HGGAEYRATGRGFVV 340
Score = 35.9 bits (72), Expect(2) = 3e-029
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3 / +2
Query: 12 GRYIFLYGKMYLALSGVGESI 74
G Y+FLYG++YL LSG+ E +
Sbjct: 2 GVYVFLYGRLYLVLSGLDEGL 64
>gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 354
Score = 111 bits (237), Expect = 3e-024
Identities = 44/70 (62%), Positives = 54/70 (77%)
Frame = +3 / +1
Query: 141 QIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
Q+G A+PM++ LE G TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+
Sbjct: 10 QLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAE 189
Query: 321 YRATGRGFVV 350
YRATGRGFVV
Sbjct: 190 YRATGRGFVV 219
>gb|CA665056.1|CA665056 wlk1.pk0011.c3 wlk1 Triticum aestivum cDNA clone wlk1.pk0011.c3 5'
end, mRNA sequence
Length = 385
Score = 106 bits (226), Expect(2) = 2e-022
Identities = 46/88 (52%), Positives = 55/88 (62%)
Frame = +3 / +1
Query: 72 IQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSV 251
IQ A+ QF+ Q+G FTA+PMIL LE G L A F T Q SV
Sbjct: 4 IQGSANATNNKALGAVLNQQFVIQLGFFTALPMILENSLELGFLPAVWDFFTXQMNFSSV 183
Query: 252 FFTFSLGTRTHYFGRAILHGGAKYRATG 335
F+TFS+GT++HY+GR ILHGGAKYRATG
Sbjct: 184 FYTFSMGTKSHYYGRTILHGGAKYRATG 267
Score = 17.1 bits (31), Expect(2) = 2e-022
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / +2
Query: 333 GRGFVV 350
GRGFVV
Sbjct: 266 GRGFVV 283
>gb|BJ268450.1|BJ268450 BJ268450 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 5', mRNA sequence
Length = 425
Score = 104 bits (222), Expect = 4e-022
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +2 / +1
Query: 17 VHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDS 175
VHISLW N+SG IWCWRINSK* GYT + S+E SEH +SFPDWC+YC S+DS
Sbjct: 265 VHISLW*NLSGFIWCWRINSK*GGYTGK*SIERGSEHPVSFPDWCVYCNSYDS 423
>gb|CD874502.1|CD874502 AZO3.102F10F011001 AZO3 Triticum aestivum cDNA clone AZO3102F10,
mRNA sequence
Length = 640
Score = 100 bits (214), Expect = 5e-021
Identities = 42/67 (62%), Positives = 48/67 (71%)
Frame = +3 / +1
Query: 150 VFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRA 329
V T +PM++ LE G A FI MQ Q+ SVFFTFSLGT+ HY+GR ILHGGAKYR
Sbjct: 7 VRTGLPMVMELGLEKGFRAALSDFILMQLQVASVFFTFSLGTKAHYYGRTILHGGAKYRP 186
Query: 330 TGRGFVV 350
TGR FVV
Sbjct: 187 TGRKFVV 207
>gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_F07_K13,
mRNA sequence
Length = 684
Score = 100 bits (212), Expect = 1e-020
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3 / +1
Query: 186 LESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LE G TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 22 LERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 186
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 384,731,480
Number of Sequences: 636343
Number of extensions: 5769838
Number of successful extensions: 386219
Number of sequences better than 1.0e-020: 21
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 6387154320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)