TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE8g03.yg.2.1
(360 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ265398.1|BJ265398 BJ265398 Y. Ogihara unpublished cDNA... 145 9e-043
gb|AF347067.1| Triticum aestivum sucrose-phosphate synthase... 145 1e-042
gb|CD454163.1|CD454163 WHE0984_H06_O12ZT CS wheat pre-anthe... 145 1e-042
gb|BJ252937.1|BJ252937 BJ252937 Y. Ogihara unpublished cDNA... 145 4e-042
gb|BJ265682.1|BJ265682 BJ265682 Y. Ogihara unpublished cDNA... 144 1e-041
gb|CD454742.1|CD454742 WHE2341_B06_C11ZT CS wheat pre-anthe... 144 1e-041
gb|AF347068.1| Triticum aestivum sucrose-phosphate synthase... 144 2e-041
gb|BJ261640.1|BJ261640 BJ261640 Y. Ogihara unpublished cDNA... 144 2e-041
gb|CA741934.1|CA741934 wia1c.pk002.c15 wia1c Triticum aesti... 132 3e-038
gb|BJ255184.1|BJ255184 BJ255184 Y. Ogihara unpublished cDNA... 144 1e-037
gb|CD922362.1|CD922362 G750.102I14F010528 G750 Triticum aes... 122 4e-036
>gb|BJ265398.1|BJ265398 BJ265398 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21m21 3', mRNA sequence
Length = 652
Score = 145 bits (311), Expect(2) = 9e-043
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = -3 / -2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMYL+ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 516 RYLFVRWGLPVGNMYLVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 337
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 336 DVVPSDSPLA 307
Score = 92.3 bits (195), Expect(2) = 3e-025
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = -1 / -3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LCAGA W TC S GNMATP +RRC+ YTR * S SPRK + C*GAQ T
Sbjct: 524 KHSGTSLCAGACPWATCTLSSGNMATPTVRRCFQDYTRR*SSKASPRKAPRTC*GAQGVT 345
Query: 42 RRTTSCRLRPPWL 4
R TS R WL
Sbjct: 344 TRKTSSRPIAHWL 306
Score = 89.0 bits (188), Expect(2) = 3e-024
Identities = 40/71 (56%), Positives = 48/71 (67%)
Frame = +2 / +1
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R DV L+V APQQ FLGD D+H LV* HLL +GVAMFP D++HV H
Sbjct: 307 SQWAIGRDDVFLVVTP*APQQVLGAFLGDAFDDHRLV*S*KHLLTVGVAMFPEDKVHVAH 486
Query: 185 I*APAHKKIPE 217
APAHK++PE
Sbjct: 487 GQAPAHKEVPE 519
Score = 82.2 bits (173), Expect(2) = 3e-021
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = +1 / +3
Query: 7 PRGSQTARRRPSCSFLGSSAALPNLSR*HPGQSQSCVTQIASPHDRCRHVPQ*SDTCSPH 186
P G +T RR P + L SSA +LSR* +S SCV ASPH RCRHVP+ TC P
Sbjct: 309 PMGYRTGRRLPCGNSLSSSAGPRSLSR*RL*RSPSCVVLKASPHGRCRHVPRGQGTCCPR 488
Query: 187 IGPSAQKDT*IFFVVI 234
GPSAQ+ T*+ ++
Sbjct: 489 AGPSAQRGT*VLVTLM 536
Score = 47.3 bits (97), Expect(2) = 9e-043
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+QVVPL+ASRSQALR
Sbjct: 576 CRNSTRMQVVPLMASRSQALR 514
Score = 41.8 bits (85), Expect(2) = 3e-025
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
TAGT++G RLSL HQGH+HSG
Sbjct: 578 TAGTQRGCRLSLSWHQGHKHSG 513
Score = 41.4 bits (84), Expect(2) = 3e-024
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LVEF Q
Sbjct: 512 YLSACDLDAMRGTTCILVEFRQ 577
Score = 38.2 bits (77), Expect(2) = 3e-021
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +1
Query: 293 LPECL*P*C*QRDNLKPCRVPA 358
+PECL*P*C +RDNL P VPA
Sbjct: 511 VPECL*P*CHERDNLHPR*VPA 576
>gb|AF347067.1| Triticum aestivum sucrose-phosphate synthase 5 mRNA, partial cds
Length = 1999
Score = 145 bits (311), Expect(2) = 1e-042
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = -3 / +2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMYL+ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 1445 RYLFVRWGLPVGNMYLVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 1624
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 1625 DVVPSDSPLA 1654
Score = 92.3 bits (195), Expect(2) = 4e-025
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = -1 / +3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LCAGA W TC S GNMATP +RRC+ YTR * S SPRK + C*GAQ T
Sbjct: 1437 KHSGTSLCAGACPWATCTLSSGNMATPTVRRCFQDYTRR*SSKASPRKAPRTC*GAQGVT 1616
Query: 42 RRTTSCRLRPPWL 4
R TS R WL
Sbjct: 1617 TRKTSSRPIAHWL 1655
Score = 89.0 bits (188), Expect(2) = 5e-024
Identities = 40/71 (56%), Positives = 48/71 (67%)
Frame = +2 / -1
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R DV L+V APQQ FLGD D+H LV* HLL +GVAMFP D++HV H
Sbjct: 1654 SQWAIGRDDVFLVVTP*APQQVLGAFLGDAFDDHRLV*S*KHLLTVGVAMFPEDKVHVAH 1475
Query: 185 I*APAHKKIPE 217
APAHK++PE
Sbjct: 1474 GQAPAHKEVPE 1442
Score = 82.2 bits (173), Expect(2) = 5e-021
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = +1 / -3
Query: 7 PRGSQTARRRPSCSFLGSSAALPNLSR*HPGQSQSCVTQIASPHDRCRHVPQ*SDTCSPH 186
P G +T RR P + L SSA +LSR* +S SCV ASPH RCRHVP+ TC P
Sbjct: 1652 PMGYRTGRRLPCGNSLSSSAGPRSLSR*RL*RSPSCVVLKASPHGRCRHVPRGQGTCCPR 1473
Query: 187 IGPSAQKDT*IFFVVI 234
GPSAQ+ T*+ ++
Sbjct: 1472 AGPSAQRGT*VLVTLM 1425
Score = 47.3 bits (97), Expect(2) = 1e-042
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+QVVPL+ASRSQALR
Sbjct: 1385 CRNSTRMQVVPLMASRSQALR 1447
Score = 41.8 bits (85), Expect(2) = 4e-025
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
TAGT++G RLSL HQGH+HSG
Sbjct: 1383 TAGTQRGCRLSLSWHQGHKHSG 1448
Score = 41.4 bits (84), Expect(2) = 5e-024
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / -2
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LVEF Q
Sbjct: 1449 YLSACDLDAMRGTTCILVEFRQ 1384
Score = 38.2 bits (77), Expect(2) = 5e-021
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / -1
Query: 293 LPECL*P*C*QRDNLKPCRVPA 358
+PECL*P*C +RDNL P VPA
Sbjct: 1450 VPECL*P*CHERDNLHPR*VPA 1385
>gb|CD454163.1|CD454163 WHE0984_H06_O12ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0984_H06_O12, mRNA sequence
Length = 687
Score = 145 bits (311), Expect(2) = 1e-042
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = -3 / -3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMYL+ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 550 RYLFVRWGLPVGNMYLVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 371
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 370 DVVPSDSPLA 341
Score = 92.3 bits (195), Expect(2) = 4e-025
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = -1 / -1
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LCAGA W TC S GNMATP +RRC+ YTR * S SPRK + C*GAQ T
Sbjct: 558 KHSGTSLCAGACPWATCTLSSGNMATPTVRRCFQDYTRR*SSKASPRKAPRTC*GAQGVT 379
Query: 42 RRTTSCRLRPPWL 4
R TS R WL
Sbjct: 378 TRKTSSRPIAHWL 340
Score = 89.0 bits (188), Expect(2) = 5e-024
Identities = 40/71 (56%), Positives = 48/71 (67%)
Frame = +2 / +2
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R DV L+V APQQ FLGD D+H LV* HLL +GVAMFP D++HV H
Sbjct: 341 SQWAIGRDDVFLVVTP*APQQVLGAFLGDAFDDHRLV*S*KHLLTVGVAMFPEDKVHVAH 520
Query: 185 I*APAHKKIPE 217
APAHK++PE
Sbjct: 521 GQAPAHKEVPE 553
Score = 82.2 bits (173), Expect(2) = 5e-021
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = +1 / +1
Query: 7 PRGSQTARRRPSCSFLGSSAALPNLSR*HPGQSQSCVTQIASPHDRCRHVPQ*SDTCSPH 186
P G +T RR P + L SSA +LSR* +S SCV ASPH RCRHVP+ TC P
Sbjct: 343 PMGYRTGRRLPCGNSLSSSAGPRSLSR*RL*RSPSCVVLKASPHGRCRHVPRGQGTCCPR 522
Query: 187 IGPSAQKDT*IFFVVI 234
GPSAQ+ T*+ ++
Sbjct: 523 AGPSAQRGT*VLVTLM 570
Score = 47.3 bits (97), Expect(2) = 1e-042
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+QVVPL+ASRSQALR
Sbjct: 610 CRNSTRMQVVPLMASRSQALR 548
Score = 41.8 bits (85), Expect(2) = 4e-025
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
TAGT++G RLSL HQGH+HSG
Sbjct: 612 TAGTQRGCRLSLSWHQGHKHSG 547
Score = 41.4 bits (84), Expect(2) = 5e-024
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LVEF Q
Sbjct: 546 YLSACDLDAMRGTTCILVEFRQ 611
Score = 38.2 bits (77), Expect(2) = 5e-021
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 293 LPECL*P*C*QRDNLKPCRVPA 358
+PECL*P*C +RDNL P VPA
Sbjct: 545 VPECL*P*CHERDNLHPR*VPA 610
>gb|BJ252937.1|BJ252937 BJ252937 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf26j11 3', mRNA sequence
Length = 584
Score = 145 bits (311), Expect(2) = 4e-042
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = -3 / -2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMYL+ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 502 RYLFVRWGLPVGNMYLVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 323
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 322 DVVPSDSPLA 293
Score = 92.3 bits (195), Expect(2) = 4e-025
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = -1 / -3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LCAGA W TC S GNMATP +RRC+ YTR * S SPRK + C*GAQ T
Sbjct: 510 KHSGTSLCAGACPWATCTLSSGNMATPTVRRCFQDYTRR*SSKASPRKAPRTC*GAQGVT 331
Query: 42 RRTTSCRLRPPWL 4
R TS R WL
Sbjct: 330 TRKTSSRPIAHWL 292
Score = 89.0 bits (188), Expect(2) = 1e-023
Identities = 40/71 (56%), Positives = 48/71 (67%)
Frame = +2 / +2
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R DV L+V APQQ FLGD D+H LV* HLL +GVAMFP D++HV H
Sbjct: 293 SQWAIGRDDVFLVVTP*APQQVLGAFLGDAFDDHRLV*S*KHLLTVGVAMFPEDKVHVAH 472
Query: 185 I*APAHKKIPE 217
APAHK++PE
Sbjct: 473 GQAPAHKEVPE 505
Score = 82.2 bits (173), Expect(2) = 3e-021
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = +1 / +1
Query: 7 PRGSQTARRRPSCSFLGSSAALPNLSR*HPGQSQSCVTQIASPHDRCRHVPQ*SDTCSPH 186
P G +T RR P + L SSA +LSR* +S SCV ASPH RCRHVP+ TC P
Sbjct: 295 PMGYRTGRRLPCGNSLSSSAGPRSLSR*RL*RSPSCVVLKASPHGRCRHVPRGQGTCCPR 474
Query: 187 IGPSAQKDT*IFFVVI 234
GPSAQ+ T*+ ++
Sbjct: 475 AGPSAQRGT*VLVTLM 522
Score = 45.1 bits (92), Expect(2) = 4e-042
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / -2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNS R+QVVPL+ASRSQALR
Sbjct: 562 CRNSXRMQVVPLMASRSQALR 500
Score = 40.9 bits (83), Expect(2) = 4e-025
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
TAGT +G RLSL HQGH+HSG
Sbjct: 564 TAGTXRGCRLSLSWHQGHKHSG 499
Score = 39.1 bits (79), Expect(2) = 1e-023
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3 / +3
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT L EF Q
Sbjct: 498 YLSACDLDAMRGTTCILXEFRQ 563
Score = 38.2 bits (77), Expect(2) = 3e-021
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 293 LPECL*P*C*QRDNLKPCRVPA 358
+PECL*P*C +RDNL P VPA
Sbjct: 497 VPECL*P*CHERDNLHPR*VPA 562
>gb|BJ265682.1|BJ265682 BJ265682 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22p10 3', mRNA sequence
Length = 617
Score = 144 bits (309), Expect(2) = 1e-041
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -3 / -1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 473 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 294
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 293 DVVPSDSPLA 264
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK ++ C*GAQ T
Sbjct: 481 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQRTC*GAQGVT 302
Query: 42 RRTTSCRLRPPWL 4
R T R WL
Sbjct: 301 TRKTLSRPIAHWL 263
Score = 83.5 bits (176), Expect(2) = 3e-022
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +2 / +3
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R +V L+V APQQ FLGD +NH LV* HLL +GVAMFP D +HV H
Sbjct: 264 SQWAIGRDNVFLVVTP*APQQVL*AFLGDAFNNHRLV*S*KHLLTVGVAMFPEDNVHVAH 443
Query: 185 I*APAHKKIPE 217
AP HK++PE
Sbjct: 444 GQAPTHKEVPE 476
Score = 44.6 bits (91), Expect(2) = 1e-041
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / -1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CR STR+QVVPL+ASRSQALR
Sbjct: 533 CRKSTRMQVVPLMASRSQALR 471
Score = 40.0 bits (81), Expect(2) = 3e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LV+F Q
Sbjct: 469 YLSACDLDAMRGTTCILVDFRQ 534
Score = 38.2 bits (77), Expect(2) = 3e-023
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1 / -2
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
T G+++G RLSL HQGH+HSG
Sbjct: 535 TVGSQRGCRLSLSWHQGHKHSG 470
>gb|CD454742.1|CD454742 WHE2341_B06_C11ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2341_B06_C11, mRNA sequence
Length = 663
Score = 144 bits (309), Expect(2) = 1e-041
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -3 / -2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 545 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 366
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 365 DVVPSDSPLA 336
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK ++ C*GAQ T
Sbjct: 553 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQRTC*GAQGVT 374
Query: 42 RRTTSCRLRPPWL 4
R T R WL
Sbjct: 373 TRKTLSRPIAHWL 335
Score = 83.5 bits (176), Expect(2) = 4e-022
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +2 / +3
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R +V L+V APQQ FLGD +NH LV* HLL +GVAMFP D +HV H
Sbjct: 336 SQWAIGRDNVFLVVTP*APQQVL*AFLGDAFNNHRLV*S*KHLLTVGVAMFPEDNVHVAH 515
Query: 185 I*APAHKKIPE 217
AP HK++PE
Sbjct: 516 GQAPTHKEVPE 548
Score = 44.6 bits (91), Expect(2) = 1e-041
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / -2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CR STR+QVVPL+ASRSQALR
Sbjct: 605 CRKSTRMQVVPLMASRSQALR 543
Score = 40.0 bits (81), Expect(2) = 4e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LV+F Q
Sbjct: 541 YLSACDLDAMRGTTCILVDFRQ 606
Score = 38.2 bits (77), Expect(2) = 3e-023
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
T G+++G RLSL HQGH+HSG
Sbjct: 607 TVGSQRGCRLSLSWHQGHKHSG 542
>gb|AF347068.1| Triticum aestivum sucrose-phosphate synthase 6 mRNA, partial cds
Length = 1030
Score = 144 bits (309), Expect(2) = 2e-041
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 478 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 657
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 658 DVVPSDSPLA 687
Score = 89.0 bits (188), Expect(2) = 4e-023
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / +2
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK ++ C*GAQ T
Sbjct: 470 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQRTC*GAQGVT 649
Query: 42 RRTTSCRLRPPWL 4
R T R WL
Sbjct: 650 TRKTLSRPIAHWL 688
Score = 83.5 bits (176), Expect(2) = 5e-022
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +2 / -2
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R +V L+V APQQ FLGD +NH LV* HLL +GVAMFP D +HV H
Sbjct: 687 SQWAIGRDNVFLVVTP*APQQVL*AFLGDAFNNHRLV*S*KHLLTVGVAMFPEDNVHVAH 508
Query: 185 I*APAHKKIPE 217
AP HK++PE
Sbjct: 507 GQAPTHKEVPE 475
Score = 44.6 bits (91), Expect(2) = 2e-041
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CR STR+QVVPL+ASRSQALR
Sbjct: 418 CRKSTRMQVVPLMASRSQALR 480
Score = 40.0 bits (81), Expect(2) = 5e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LV+F Q
Sbjct: 482 YLSACDLDAMRGTTCILVDFRQ 417
Score = 38.2 bits (77), Expect(2) = 4e-023
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
T G+++G RLSL HQGH+HSG
Sbjct: 416 TVGSQRGCRLSLSWHQGHKHSG 481
>gb|BJ261640.1|BJ261640 BJ261640 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3o22 3', mRNA sequence
Length = 736
Score = 144 bits (309), Expect(2) = 2e-041
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -3 / -2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 435 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 256
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 255 DVVPSDSPLA 226
Score = 89.0 bits (188), Expect(2) = 4e-023
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK ++ C*GAQ T
Sbjct: 443 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQRTC*GAQGVT 264
Query: 42 RRTTSCRLRPPWL 4
R T R WL
Sbjct: 263 TRKTLSRPIAHWL 225
Score = 83.5 bits (176), Expect(2) = 5e-022
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +2 / +1
Query: 5 SQGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPH 184
SQ + R +V L+V APQQ FLGD +NH LV* HLL +GVAMFP D +HV H
Sbjct: 226 SQWAIGRDNVFLVVTP*APQQVL*AFLGDAFNNHRLV*S*KHLLTVGVAMFPEDNVHVAH 405
Query: 185 I*APAHKKIPE 217
AP HK++PE
Sbjct: 406 GQAPTHKEVPE 438
Score = 44.6 bits (91), Expect(2) = 2e-041
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / -2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CR STR+QVVPL+ASRSQALR
Sbjct: 495 CRKSTRMQVVPLMASRSQALR 433
Score = 40.0 bits (81), Expect(2) = 5e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LV+F Q
Sbjct: 431 YLSACDLDAMRGTTCILVDFRQ 496
Score = 38.2 bits (77), Expect(2) = 4e-023
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
T G+++G RLSL HQGH+HSG
Sbjct: 497 TVGSQRGCRLSLSWHQGHKHSG 432
>gb|CA741934.1|CA741934 wia1c.pk002.c15 wia1c Triticum aestivum cDNA clone wia1c.pk002.c15
5' end, mRNA sequence
Length = 569
Score = 132 bits (283), Expect(2) = 3e-038
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3 / +2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGS LLRS SY
Sbjct: 362 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSXXLLRSSXSYHXX 541
Query: 34 DVVPSETPL 8
DVVPS++PL
Sbjct: 542 DVVPSDSPL 568
Score = 81.3 bits (171), Expect(2) = 5e-021
Identities = 37/72 (51%), Positives = 41/72 (56%)
Frame = -1 / +3
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK + C*GA T
Sbjct: 354 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQXTC*GAXXVT 533
Query: 42 RRTTSCRLRPPW 7
T R W
Sbjct: 534 TXXTLSRPIAHW 569
Score = 80.3 bits (169), Expect(2) = 3e-021
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +2 / -2
Query: 8 QGGLRRHDVVLLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPHI 187
Q + R +V +V APQQ FLGD +NH LV* HLL +GVAMFP D +HV H
Sbjct: 568 QWAIGRDNVXXVVTXXAPQQVX*AFLGDAFNNHRLV*S*KHLLTVGVAMFPEDNVHVAHG 389
Query: 188 *APAHKKIPE 217
AP HK++PE
Sbjct: 388 QAPTHKEVPE 359
Score = 44.6 bits (91), Expect(2) = 3e-038
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +2
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CR STR+QVVPL+ASRSQALR
Sbjct: 302 CRKSTRMQVVPLMASRSQALR 364
Score = 40.0 bits (81), Expect(2) = 3e-021
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LV+F Q
Sbjct: 366 YLSACDLDAMRGTTCILVDFRQ 301
Score = 38.2 bits (77), Expect(2) = 5e-021
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
T G+++G RLSL HQGH+HSG
Sbjct: 300 TVGSQRGCRLSLSWHQGHKHSG 365
>gb|BJ255184.1|BJ255184 BJ255184 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8l03 3', mRNA sequence
Length = 560
Score = 144 bits (309), Expect(2) = 1e-037
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -3 / -1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMY++ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS GSY K+
Sbjct: 521 RYLFVRWGLPVGNMYIVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKE 342
Query: 34 DVVPSETPLA 5
DVVPS++PLA
Sbjct: 341 DVVPSDSPLA 312
Score = 89.0 bits (188), Expect(2) = 7e-021
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LC GA W TC S GNMATP +RRC+ YTR *L SPRK ++ C*GAQ T
Sbjct: 529 KHSGTSLCVGACPWATCTLSSGNMATPTVRRCFQDYTRR*LLKASPRKAQRTC*GAQGVT 350
Query: 42 RRTTSCRLRPPWL 4
R T R WL
Sbjct: 349 TRKTLSRPIAHWL 311
Score = 30.9 bits (61), Expect(2) = 1e-037
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -3 / -1
Query: 337 QVVPLLASRSQALR 296
QVVPL+ASRSQALR
Sbjct: 560 QVVPLMASRSQALR 519
Score = 29.9 bits (59), Expect(2) = 7e-021
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 336 RLSLC*HQGHRHSG 295
RLSL HQGH+HSG
Sbjct: 559 RLSLSWHQGHKHSG 518
>gb|CD922362.1|CD922362 G750.102I14F010528 G750 Triticum aestivum cDNA clone G750102I14,
mRNA sequence
Length = 531
Score = 122 bits (262), Expect(2) = 4e-036
Identities = 52/69 (75%), Positives = 55/69 (79%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYLFVRWGL VGNMYL+ GEHGDTD EEMLSGLHKTVIV+GVTEKGSE LLRS G Y K
Sbjct: 282 RYLFVRWGLPVGNMYLVLGEHGDTDREEMLSGLHKTVIVKGVTEKGSEDLLRSSGRYHKG 461
Query: 34 DVVPSETPL 8
P P+
Sbjct: 462 RRRPVR*PI 488
Score = 84.0 bits (177), Expect(3) = 1e-024
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = -1 / +1
Query: 222 KNSGIFLCAGAYMWGTCI*SLGNMATPIMRRCYLGYTRL*LSGVSPRKVRKGC*GAQEAT 43
K+SG LCAGA W TC S GNMATP +RRC+ YTR * S SPRK + C*GAQ T
Sbjct: 274 KHSGTSLCAGACPWATCTLSSGNMATPTVRRCFQDYTRR*SSKASPRKAPRTC*GAQGGT 453
Query: 42 RR 37
R
Sbjct: 454 TR 459
Score = 79.4 bits (167), Expect(2) = 2e-021
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +2 / -2
Query: 38 LLVASWAPQQPFRTFLGDTPDNHSLV*PR*HLLMIGVAMFPSDQIHVPHI*APAHKKIPE 217
L+V APQQ FLGD D+H LV* HLL +GVAMFP D++HV H APAHK++PE
Sbjct: 458 LVVPP*APQQVLGAFLGDAFDDHRLV*S*KHLLTVGVAMFPEDKVHVAHGQAPAHKEVPE 279
Score = 47.3 bits (97), Expect(2) = 4e-036
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +3
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+QVVPL+ASRSQALR
Sbjct: 222 CRNSTRMQVVPLMASRSQALR 284
Score = 41.8 bits (85), Expect(3) = 1e-024
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 360 TAGTRQGFRLSLC*HQGHRHSG 295
TAGT++G RLSL HQGH+HSG
Sbjct: 220 TAGTQRGCRLSLSWHQGHKHSG 285
Score = 41.4 bits (84), Expect(2) = 2e-021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 294 YLSACDLDASRGTT*SLVEFLQ 359
YLSACDLDA RGTT LVEF Q
Sbjct: 286 YLSACDLDAMRGTTCILVEFRQ 221
Score = 22.6 bits (43), Expect(3) = 1e-024
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 52 GSYKKDDVVPSETPLA 5
G ++DV PS++PLA
Sbjct: 445 GGTTREDVGPSDSPLA 492
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 396,087,595
Number of Sequences: 636343
Number of extensions: 6399230
Number of successful extensions: 368191
Number of sequences better than 1.0e-020: 14
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 6117274560
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)