TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021176.2.1
(1318 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aes... 199 1e-074
gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: L... 208 2e-062
gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated... 235 8e-061
gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: L... 210 9e-061
gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed r... 210 9e-061
gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated se... 226 3e-058
gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stresse... 201 9e-057
gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated se... 214 2e-054
gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aesti... 179 3e-053
gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized c... 132 1e-051
gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed r... 123 8e-050
gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated... 196 4e-049
gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed r... 149 4e-046
gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stresse... 95 9e-041
gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aest... 134 4e-039
gb|CA653991.1|CA653991 wre1n.pk189.f9 wre1n Triticum aestiv... 119 5e-039
gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aes... 96 3e-035
gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated se... 91 7e-035
gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: L... 91 4e-032
gb|CK200217.1|CK200217 FGAS008726 Triticum aestivum FGAS: L... 103 5e-032
gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring whe... 95 3e-030
gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDN... 88 7e-024
gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum ... 109 7e-023
gb|CA652901.1|CA652901 wre1n.pk172.g1 wre1n Triticum aestiv... 104 2e-021
>gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aestivum cDNA clone AZO4100L12,
mRNA sequence
Length = 507
Score = 199 bits (429), Expect(2) = 1e-074
Identities = 78/96 (81%), Positives = 83/96 (86%)
Frame = +1 / +1
Query: 355 GACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIA 534
GA GDPRFIGGDGNAFYFHGR DADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIA
Sbjct: 28 GAGGDPRFIGGDGNAFYFHGRTDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIA 207
Query: 535 VLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRL 642
LFDGH LY+GARKT WDD V+ +E+ LDGEPV L
Sbjct: 208 GLFDGHRLYLGARKTGTWDDAVEHLEIILDGEPVYL 315
Score = 152 bits (326), Expect(2) = 3e-057
Identities = 69/103 (66%), Positives = 70/103 (67%)
Frame = -3 / -2
Query: 641 RRTGXXXXXXXXXXXXXSHAAVFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCAL 462
R TG S VFLAP * WPSKS AMAWI VKSRDMP P LPMKCAL
Sbjct: 314 RYTGSPSRMISRCSTASSQVPVFLAPR*RRWPSKSPAMAWIQVKSRDMPLWPLLPMKCAL 135
Query: 461 MWRSRSESTQKSASRRPWK*KALPSPPMKRGSPHAPGTLHTQT 333
M RSRSE+TQKSAS RPWK*KALPSPPM RGSP APG L T
Sbjct: 134 M*RSRSETTQKSASVRPWK*KALPSPPMNRGSPPAPGVLQRPT 6
Score = 103 bits (219), Expect(2) = 1e-074
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +1 / +1
Query: 658 AAWTSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCL 828
A WTS VP LSVTRT AANGVL++LDG+F++RANA PI +EESRVHR GVTA+DCL
Sbjct: 337 AKWTSSRVPELSVTRTKAANGVLITLDGKFSVRANAGPINKEESRVHR*GVTAEDCL 507
Score = 91.8 bits (194), Expect(2) = 3e-057
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = -3 / -2
Query: 827 RQSSAVTPYRCTLDSSSVMGTALALMVNLPSSETSTPLAALVRVTDSAGTAPDVHAA 657
RQSSAVTP RCTLDSS +MG ALAL +N PS STPLAALVRVTDS+GT +VH A
Sbjct: 506 RQSSAVTP*RCTLDSSLLMGPALALTLNFPSRVMSTPLAALVRVTDSSGTRLEVHLA 336
Score = 81.7 bits (172), Expect(2) = 7e-032
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -2 / -1
Query: 828 EAVVGRDAVPVHPGLLLCDGHGVGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRG 658
EAV G DA+ VHP L DG GVGPD E +VE DEHAVGR GAG GQ AG P G
Sbjct: 507 EAVFGGDALAVHPRFFLVDGPGVGPDAELSVEGDEHAVGRLGAGHGQLGDAAGGPLG 337
Score = 77.6 bits (163), Expect(2) = 7e-032
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = -2 / -1
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHA 496
E HGLAVQ +L +D VVP LPGA+VE VAVEE GDGLDP EVP HA
Sbjct: 315 EIHGLAVQDDLEVLDGVVPGAGLPGAEVEAVAVEEPGDGLDPGEVP*HA 169
>gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 808
Score = 208 bits (448), Expect(3) = 2e-062
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = +1 / +2
Query: 355 GACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIA 534
GACGDPRFIGGDGNAFYFHGRRDADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIA
Sbjct: 440 GACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIA 619
Query: 535 VLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRL 642
VLFDGH LY+GARKT WDD V+ +++TLDGE V L
Sbjct: 620 VLFDGHRLYLGARKTGTWDDAVEHLDITLDGEHVYL 727
Score = 191 bits (411), Expect(2) = 3e-049
Identities = 86/113 (76%), Positives = 88/113 (77%)
Frame = -3 / -2
Query: 578 VFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCALMWRSRSESTQKSASRRPWK*K 399
VFLAP * WPSKSTAMAWI VKSRDMP P LPMKCALM RSRSE+TQKSAS RPWK*K
Sbjct: 663 VFLAPR*RRWPSKSTAMAWIQVKSRDMPLWPLLPMKCALM*RSRSETTQKSASLRPWK*K 484
Query: 398 ALPSPPMKRGSPHAPGTLHTQTGLQELQSA*HDWEHSAGHSIGLPGQ*G*SLR 240
ALPSPPM RGSPHAPG L TQTGL LQS * DW AG S+ Q*G SLR
Sbjct: 483 ALPSPPMNRGSPHAPGVLQTQTGLHVLQSG*QDWGQLAGQSMFRLKQ*GFSLR 325
Score = 43.7 bits (89), Expect(3) = 2e-062
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / +2
Query: 241 RKLYPYCPGKPMECPAECSQSCYAD 315
RK PYC + M+CPA C QSCY D
Sbjct: 326 RKENPYCFNRNMDCPANCPQSCYPD 400
Score = 28.1 bits (55), Expect(3) = 2e-062
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 658 AAWTSGAVPALSVTRTSAA 714
A WTS VP LSV RT A
Sbjct: 749 ANWTSSRVPELSVNRTRRA 805
Score = 26.3 bits (51), Expect(2) = 3e-049
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / -2
Query: 713 AALVRVTDSAGTAPDVHAA 657
A LVR TDS+GT DV A
Sbjct: 804 ARLVRFTDSSGTRLDVQLA 748
>gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 743
Score = 235 bits (508), Expect = 8e-061
Identities = 93/169 (55%), Positives = 119/169 (70%)
Frame = +1 / -3
Query: 526 AIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRT 705
A+ + F H LY+ A+KT WD DVDR+EL DG P+ + DA W S VP L++TRT
Sbjct: 741 ALGIRFADHRLYMAAQKTVEWDSDVDRLELAFDGMPIDIPTEVDAEWQSTIVPTLTITRT 562
Query: 706 SAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGV 885
SA NG+ V L G F I AN VPITE++SR+H YGVT +D LAH D+ FKF A T DVHGV
Sbjct: 561 SATNGIRVQLKGVFDILANVVPITEKDSRIHNYGVTEEDSLAHFDIGFKFHAFTDDVHGV 382
Query: 886 VGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGS 1032
+GQTYR+DYVN+ V A+MP MGG ++Y +S +F+ DC VAR+ S G+
Sbjct: 381 LGQTYRTDYVNKLSVTANMPIMGGAASYVSSDIFSTDCKVARFGRSRGA 235
Score = 138 bits (296), Expect = 1e-031
Identities = 70/158 (44%), Positives = 90/158 (56%)
Frame = -2 / +1
Query: 999 AVSGEEAGRGVVAVPSHGGH*GLDIEPVDVVGAVRLADHAVHVGGERAELEGQVKVREAV 820
AV GE+ G V +H GH G E VDVV AVRLA+H+V + E ELE V+VREAV
Sbjct: 268 AVGGEDVGGDVAGGAAHDGHVGGHAELVDVVRAVRLAEHSVDIICEGVELEPNVEVREAV 447
Query: 819 VGRDAVPVHPGLLLCDGHGVGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRGVGSRQE 640
R AV V G+LL DGH +G D + ++E D AVGR G D QR H G P + +
Sbjct: 448 FLRHAVVVDAGVLLGDGHHIGQDVKHSLELDPDAVGRGGPCDSQRGHDGGLPLSIDLGGD 627
Query: 639 AHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDG 526
G ++G+L AVD+ VP L G V+ V + +G
Sbjct: 628 VDGHTIKGQLKAVDIAVPLDGLLGGHVKAVVGKADAEG 741
Score = 134 bits (288), Expect = 2e-030
Identities = 72/156 (46%), Positives = 87/156 (55%)
Frame = -3 / +2
Query: 1007 ATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCA 828
AT QS K + *L +PPM+G+ A+T + LT*S RYVWP+TP TS+V A NL S+CA
Sbjct: 260 ATLQSVEKMSEET*LAAPPMMGMLAVTLSLLT*SVRYVWPSTPWTSSVKAWNLNPMSKCA 439
Query: 827 RQSSAVTPYRCTLDSSSVMGTALALMVNLPSSETSTPLAALVRVTDSAGTAPDVHAASVP 648
R SS+VTP +S SVMGT LA M N P S T PL A V V + GT D H+AS
Sbjct: 440 RLSSSVTP*LWMRESFSVMGTTLAKMSNTPLSWTLMPLVAEVLVIVNVGTMVDCHSASTS 619
Query: 647 GRRRTGXXXXXXXXXXXXXSHAAVFLAPT*SSWPSK 540
G SH+ VF A * W +K
Sbjct: 620 VGMSMGIPSKASSRRSTSLSHSTVFWAAM*RRWSAK 727
>gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 210 bits (454), Expect(2) = 9e-061
Identities = 81/96 (84%), Positives = 86/96 (89%)
Frame = +1 / +1
Query: 355 GACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIA 534
GACGDPRFIGGDGNAFYFHGRRDADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIA
Sbjct: 445 GACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIA 624
Query: 535 VLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRL 642
VLFDGH LY+GARKT WDD V+ +E+ LDGEPV L
Sbjct: 625 VLFDGHRLYLGARKTGTWDDAVEHLEIILDGEPVYL 732
Score = 198 bits (426), Expect(2) = 9e-051
Identities = 91/133 (68%), Positives = 94/133 (70%)
Frame = -3 / -3
Query: 641 RRTGXXXXXXXXXXXXXSHAAVFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCAL 462
R TG S VFLAP * WPSKSTAMAWI VKSRDMP P LPMKCAL
Sbjct: 731 RYTGSPSRMISRCSTASSQVPVFLAPR*RRWPSKSTAMAWIQVKSRDMPLWPLLPMKCAL 552
Query: 461 MWRSRSESTQKSASRRPWK*KALPSPPMKRGSPHAPGTLHTQTGLQELQSA*HDWEHSAG 282
M RSRSE+TQKSAS RPWK*KALPSPPM RGSPHAPG LHTQTGL +LQSA* DW AG
Sbjct: 551 M*RSRSETTQKSASLRPWK*KALPSPPMNRGSPHAPGVLHTQTGLHDLQSA*QDWGQLAG 372
Query: 281 HSIGLPGQ*G*SL 243
SI Q*G +L
Sbjct: 371 QSILWLEQ*GFTL 333
Score = 45.1 bits (92), Expect(2) = 9e-061
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +1
Query: 244 KLYPYCPGKPMECPAECSQSCYAD 315
++ PYC + M+CPA C QSCYAD
Sbjct: 334 RVNPYCSNQRMDCPANCPQSCYAD 405
Score = 24.4 bits (47), Expect(2) = 9e-051
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 713 AALVRVTDSAGT 678
A LVRVTDS+GT
Sbjct: 808 APLVRVTDSSGT 773
>gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H03_O06, mRNA sequence
Length = 684
Score = 210 bits (454), Expect(2) = 9e-061
Identities = 81/96 (84%), Positives = 86/96 (89%)
Frame = +1 / +2
Query: 355 GACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIA 534
GACGDPRFIGGDGNAFYFHGRRDADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIA
Sbjct: 350 GACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIA 529
Query: 535 VLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRL 642
VLFDGH LY+GARKT WDD V+ +E+ LDGEPV L
Sbjct: 530 VLFDGHRLYLGARKTGTWDDAVEHLEIILDGEPVYL 637
Score = 198 bits (426), Expect(2) = 4e-050
Identities = 91/133 (68%), Positives = 94/133 (70%)
Frame = -3 / -1
Query: 641 RRTGXXXXXXXXXXXXXSHAAVFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCAL 462
R TG S VFLAP * WPSKSTAMAWI VKSRDMP P LPMKCAL
Sbjct: 636 RYTGSPSRMISRCSTASSQVPVFLAPR*RRWPSKSTAMAWIQVKSRDMPLWPLLPMKCAL 457
Query: 461 MWRSRSESTQKSASRRPWK*KALPSPPMKRGSPHAPGTLHTQTGLQELQSA*HDWEHSAG 282
M RSRSE+TQKSAS RPWK*KALPSPPM RGSPHAPG LHTQTGL +LQSA* DW AG
Sbjct: 456 M*RSRSETTQKSASLRPWK*KALPSPPMNRGSPHAPGVLHTQTGLHDLQSA*QDWGQLAG 277
Query: 281 HSIGLPGQ*G*SL 243
SI Q*G +L
Sbjct: 276 QSILWLEQ*GFTL 238
Score = 45.1 bits (92), Expect(2) = 9e-061
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +2
Query: 244 KLYPYCPGKPMECPAECSQSCYAD 315
++ PYC + M+CPA C QSCYAD
Sbjct: 239 RVNPYCSNQRMDCPANCPQSCYAD 310
Score = 22.1 bits (42), Expect(2) = 4e-050
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 683 GTAPDVHAASVPGRR 639
GT +VH A PGRR
Sbjct: 683 GTRLEVHLALRPGRR 639
>gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0448_d06_h12, mRNA
sequence
Length = 474
Score = 226 bits (489), Expect = 3e-058
Identities = 92/148 (62%), Positives = 109/148 (73%)
Frame = +1 / +1
Query: 499 MSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGA 678
MSRDFTWIQA+ + F H LY+ A+KTA WD DVDR+ELT DG P+ + DA W S
Sbjct: 31 MSRDFTWIQALGIRFADHRLYMAAQKTAEWDSDVDRLELTFDGIPIDIPTENDAEWQSTI 210
Query: 679 VPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFG 858
VP L+VTRTSA NGV V L G F I AN VPITE++SR+H YGVT +D LAH D+ FKF
Sbjct: 211 VPTLTVTRTSATNGVRVQLKGVFDILANVVPITEKDSRIHNYGVTEEDSLAHFDIGFKFH 390
Query: 859 ALTADVHGVVGQTYRSDYVNRFDVKASM 942
A T DVHGV+GQTYR+DYVN+ V A+M
Sbjct: 391 AFTDDVHGVLGQTYRTDYVNKLSVSANM 474
Score = 133 bits (285), Expect = 4e-030
Identities = 69/148 (46%), Positives = 85/148 (57%)
Frame = -2 / -1
Query: 942 H*GLDIEPVDVVGAVRLADHAVHVGGERAELEGQVKVREAVVGRDAVPVHPGLLLCDGHG 763
H G E VDVV AV LA+H+V + E ELE V+VREAV R A+ V +LL DGH
Sbjct: 474 HVGAHAELVDVVRAVGLAEHSVDIISEGVELEPNVEVREAVFLRHAIVVDARVLLGDGHH 295
Query: 762 VGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRGVGSRQEAHGLAVQGELHAVDVVVPR 583
+G D + +E D AVGR G GD Q H G P + + G AV+G+L AV+V VP
Sbjct: 294 IGQDVKHPLELDPDAVGRGGPGDCQGGHDGGLPLCIVLGGDVDGYAVKGQLKAVNVAVPL 115
Query: 582 GRLPGADVELVAVEEHGDGLDPREVPGH 499
G L G V+ V E +GLDP EV H
Sbjct: 114 GGLLGGHVKAVVGEADAEGLDPGEVAAH 31
Score = 131 bits (280), Expect = 2e-029
Identities = 72/146 (49%), Positives = 81/146 (55%)
Frame = -3 / -2
Query: 935 ALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSSVMGTALA 756
ALT + LT*S R VWP+TP TS+V A NL S+CAR SS+VTP +S SVMGT LA
Sbjct: 467 ALTLSLLT*SVR*VWPSTPWTSSVKAWNLNPMSKCARLSSSVTP*LWMRESFSVMGTTLA 288
Query: 755 LMVNLPSSETSTPLAALVRVTDSAGTAPDVHAASVPGRRRTGXXXXXXXXXXXXXSHAAV 576
M N P S T TPL A V VT GT D H+AS G SH+AV
Sbjct: 287 KMSNTPLSWTLTPLVAEVLVTVKVGTMVDCHSASFSVGMSMGMPSKVSSRRSTSLSHSAV 108
Query: 575 FLAPT*SSWPSKSTAMAWIHVKSRDM 498
F A * W +K AWI VKSR M
Sbjct: 107 FWAAM*RRWSAKRMPRAWIQVKSRLM 30
>gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_A11_A21, mRNA sequence
Length = 587
Score = 201 bits (433), Expect(2) = 9e-057
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +1 / +2
Query: 355 GACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIA 534
GACGDPRFIGGDGNAFYFHGRRDADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIA
Sbjct: 317 GACGDPRFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIA 496
Query: 535 VLFDGHELYVGARKTAAWDDDVDRMELTLD 624
VLFDGH LY+GARKT WDD V+ +++TLD
Sbjct: 497 VLFDGHRLYLGARKTGTWDDAVEHLDITLD 586
Score = 191 bits (411), Expect = 2e-047
Identities = 86/113 (76%), Positives = 88/113 (77%)
Frame = -3 / -3
Query: 578 VFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCALMWRSRSESTQKSASRRPWK*K 399
VFLAP * WPSKSTAMAWI VKSRDMP P LPMKCALM RSRSE+TQKSAS RPWK*K
Sbjct: 540 VFLAPR*RRWPSKSTAMAWIQVKSRDMPLWPLLPMKCALM*RSRSETTQKSASLRPWK*K 361
Query: 398 ALPSPPMKRGSPHAPGTLHTQTGLQELQSA*HDWEHSAGHSIGLPGQ*G*SLR 240
ALPSPPM RGSPHAPG L TQTGL LQS * DW AG S+ Q*G SLR
Sbjct: 360 ALPSPPMNRGSPHAPGVLQTQTGLHVLQSG*QDWGQLAGQSMFQLKQ*GFSLR 202
Score = 41.4 bits (84), Expect(2) = 9e-057
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 241 RKLYPYCPGKPMECPAECSQSCYAD 315
RK PYC M+CPA C QSCY D
Sbjct: 203 RKENPYCFNWNMDCPANCPQSCYPD 277
>gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 612
Score = 214 bits (462), Expect = 2e-054
Identities = 86/159 (54%), Positives = 112/159 (70%)
Frame = +1 / +1
Query: 550 HELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLV 729
H LYVGA+K WD++ D +++TLDG PV + G +A W S A+P LSVTRT N V+V
Sbjct: 1 HRLYVGAKKVVEWDEEEDHVQITLDGVPVEVEAGKNAQWVSRAMPGLSVTRTDTVNTVVV 180
Query: 730 SLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSD 909
LDG F+I ANAVPIT+E+SR+H YG T D L HLDL FKF LT V GV+GQTY S+
Sbjct: 181 ELDGVFSISANAVPITDEDSRIHNYGKTEKDSLVHLDLGFKFHTLTNAVDGVLGQTYHSN 360
Query: 910 YVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSG 1026
Y+++ +V A MP MGG Y ++SLF+ DC V+R+ +G
Sbjct: 361 YISKVNVTAKMPIMGGAPKYLSASLFSTDCTVSRFHRNG 477
Score = 141 bits (302), Expect = 2e-032
Identities = 71/151 (47%), Positives = 92/151 (60%)
Frame = -2 / -1
Query: 1002 GAVSGEEAGRGVVAVPSHGGH*GLDIEPVDVVGAVRLADHAVHVGGERAELEGQVKVREA 823
GAV GEEAGR V+ +H GH G DI+ DVV V LA+HAVH + ELE +++V EA
Sbjct: 453 GAVCGEEAGREVLGRAAHYGHLGRDIDLADVV*VVGLAEHAVHRIRKGVELEPEIEVHEA 274
Query: 822 VVGRDAVPVHPGLLLCDGHGVGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRGVGSRQ 643
++ V V PG+L+ DGHGVG E AVE + V R GA DG+ RHG P G+ +
Sbjct: 273 ILLGLPVVVDPGVLVSDGHGVGGYAEHAVELHDDGVHRVGASDGESRHGPRDPLGILAGL 94
Query: 642 EAHGLAVQGELHAVDVVVPRGRLPGADVELV 550
HG V+G+L+ V ++VP L G VE V
Sbjct: 93 HLHGHPVEGDLNMVLLLVPLDDLLGTYVETV 1
Score = 129 bits (277), Expect = 6e-029
Identities = 71/151 (47%), Positives = 85/151 (56%)
Frame = -3 / -2
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
R T QS KRL L +PP++GI A+T L * E VWP+TP T+ V NL RSRC
Sbjct: 461 RETVQSVEKRLAERYLGAPPIMGILAVTLTLLM*FEW*VWPSTPSTAFVRVWNLNPRSRC 282
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSETSTPLAALVRVTDSAGTAPDVHAASV 651
R S +V P +SSSVMGTALA M+N PSS T+T VRVT+S G A + H A +
Sbjct: 281 TRLSFSVFP*LWIRESSSVMGTALADMLNTPSSSTTTVFTVSVRVTESPGMALETHWAFL 102
Query: 650 PGRRRTGXXXXXXXXXXXXXSHAAVFLAPT* 558
P TG SH+ FLAPT*
Sbjct: 101 PASTSTGTPSRVI*TWSSSSSHSTTFLAPT* 9
>gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aestivum cDNA clone wre1n.pk0152.e6
5' end, mRNA sequence
Length = 500
Score = 179 bits (386), Expect(2) = 3e-053
Identities = 69/83 (83%), Positives = 74/83 (89%)
Frame = +1 / +2
Query: 373 RFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGADGMSRDFTWIQAIAVLFDGH 552
RFIGGDGNAFYFHGRRDADFCV+SDRDLHINAHFIGK G GMSRDFTWIQAIAVLFDGH
Sbjct: 2 RFIGGDGNAFYFHGRRDADFCVVSDRDLHINAHFIGKSGHSGMSRDFTWIQAIAVLFDGH 181
Query: 553 ELYVGARKTAAWDDDVDRMELTL 621
LY+GARKT WDD V+ +E+ L
Sbjct: 182 RLYLGARKTGTWDDAVEHLEIIL 250
Score = 135 bits (289), Expect(3) = 8e-047
Identities = 58/69 (84%), Positives = 59/69 (85%)
Frame = -3 / -3
Query: 578 VFLAPT*SSWPSKSTAMAWIHVKSRDMPSAPCLPMKCALMWRSRSESTQKSASRRPWK*K 399
VFLAP * WPSKSTAMAWI VKSRDMP P LPMKCALM RSRSE+TQKSAS RPWK*K
Sbjct: 207 VFLAPR*RRWPSKSTAMAWIQVKSRDMPLWPLLPMKCALM*RSRSETTQKSASLRPWK*K 28
Query: 398 ALPSPPMKR 372
ALPSPPM R
Sbjct: 27 ALPSPPMNR 1
Score = 71.6 bits (150), Expect(3) = 1e-024
Identities = 31/46 (67%), Positives = 34/46 (73%)
Frame = -2 / -2
Query: 633 GLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGHA 496
G Q +L +D VVP LPGA+VE VAVEEHGDGLDP EVPGHA
Sbjct: 262 GSPSQDDL*MLDSVVPGAGLPGAEVEAVAVEEHGDGLDPGEVPGHA 125
Score = 53.8 bits (111), Expect(2) = 3e-053
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1 / +3
Query: 742 RFTIRANAVPITEEESRVHRYGVTADDCLA 831
+ ++RANAVPI E +SRVHRYGVTADD A
Sbjct: 378 KXSVRANAVPINEXDSRVHRYGVTADDARA 467
Score = 49.6 bits (102), Expect(3) = 8e-047
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -3 / -2
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALAL 753
AR SSAVTP RCTL+SSS+MGTALAL
Sbjct: 466 ARASSAVTP*RCTLESSSLMGTALAL 389
Score = 46.4 bits (95), Expect(3) = 1e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2 / -1
Query: 825 AVVGRDAVPVHPGLLLCDGHGVGPD 751
++VG D V VHPG+ DGHGVGPD
Sbjct: 461 SIVGGDXVTVHPGIXFVDGHGVGPD 387
Score = 42.8 bits (87), Expect(3) = 8e-047
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 740 PSSETSTPLAALVRVTDSAGTAPDVHAA 657
P TSTPLA LVRVTDS+GT +VH A
Sbjct: 377 PWRATSTPLAPLVRVTDSSGTRLEVHLA 294
Score = 34.5 bits (69), Expect(3) = 1e-024
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 741 AVERDEHAVGRAGAGDGQRRHGAGRPRG 658
+VE DEHA+G GAG Q AG P G
Sbjct: 378 SVEGDEHAIGPLGAGHRQLGDAAGGPLG 295
>gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0815_H07_P13, mRNA sequence
Length = 519
Score = 132 bits (282), Expect(2) = 1e-051
Identities = 51/92 (55%), Positives = 67/92 (72%)
Frame = +1 / +3
Query: 502 SRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAV 681
+RDFTW+QA+ + F GH LY+G ++T WD+ VDR+ +TLDG PV L A+W+ +
Sbjct: 243 ARDFTWVQALGIRFGGHRLYLGVKRTVTWDNAVDRLVITLDGVPVELAGAPAASWSPASA 422
Query: 682 PALSVTRTSAANGVLVSLDGRFTIRANAVPIT 777
PALSV R AANGV+V LDG+F I ANAVP+T
Sbjct: 423 PALSVFRIGAANGVVVRLDGQFRIVANAVPVT 518
Score = 93.6 bits (198), Expect(2) = 1e-051
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
C DPRF+GGDGN F FHGRRDADFC+LSD +LHINAHFIGK
Sbjct: 105 CYDPRFVGGDGNKFLFHGRRDADFCLLSDTNLHINAHFIGK 227
Score = 81.7 bits (172), Expect(2) = 5e-030
Identities = 42/88 (47%), Positives = 48/88 (54%)
Frame = -2 / -2
Query: 768 HGVGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRGVGSRQEAHGLAVQGELHAVDVVV 589
H VG D E AVE HAVGRA A DGQRR G P G + G + G+ AVD V+
Sbjct: 509 HRVGDDAELAVEAHHHAVGRADAEDGQRRRGGRAPAGGRRPGQLDGHTI*GDDEAVDGVI 330
Query: 588 PRGRLPGADVELVAVEEHGDGLDPREVP 505
P R A+VE VA E + L P EVP
Sbjct: 329 PGDRPLDAEVEAVAAEADAERLHPCEVP 246
Score = 71.2 bits (149), Expect(2) = 5e-030
Identities = 31/42 (73%), Positives = 32/42 (76%)
Frame = -3 / -3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGSPHA 357
LPMKCALM R SES QKSAS RPWK LPSPP KRGS H+
Sbjct: 226 LPMKCALMCRLVSESRQKSASLRPWKRNLLPSPPTKRGS*HS 101
>gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2867_E05_I09, mRNA sequence
Length = 597
Score = 123 bits (264), Expect(2) = 8e-050
Identities = 51/93 (54%), Positives = 62/93 (66%)
Frame = +1 / +3
Query: 499 MSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGA 678
MSRDFTWIQA+ + F H LY+GA+KT W++DVDR+ELT DGE + + A W S
Sbjct: 318 MSRDFTWIQALGIRFADHRLYMGAQKTTKWNNDVDRLELTFDGESININADIGAKWQSTN 497
Query: 679 VPALSVTRTSAANGVLVSLDGRFTIRANAVPIT 777
VP L+V RT+ NGV V L G F I A VPIT
Sbjct: 498 VPGLTVMRTTVTNGVRVQLKGVFDIMAKVVPIT 596
Score = 95.5 bits (202), Expect(2) = 8e-050
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1 / +3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
+CGDPRF G DGN FYFHG++D DFCVLSD DLHINAHFIGK
Sbjct: 180 SCGDPRFTGADGNNFYFHGKKDQDFCVLSDADLHINAHFIGK 305
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -3 / -3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGSP 363
LPMK ALMWRS SE TQKS S PWK*K LPS P+KRGSP
Sbjct: 304 LPMK*ALMWRSASERTQKSWSFLPWK*KLLPSAPVKRGSP 185
Score = 49.2 bits (101), Expect(3) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / -2
Query: 624 VQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGH 499
V+G+L AVD+VVP G L G VE V E LDP EV H
Sbjct: 443 VEGQLEAVDIVVPLGGLLGTHVEAVVSEADAQSLDPCEVTAH 318
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -3 / -3
Query: 776 VMGTALALMVNLPSSETSTPLAALVRVTDSAGTAPDVHAASV 651
VMGT LA+M N P S T TPL +V +T GT D H A +
Sbjct: 595 VMGTTLAMMSNTPLSWTLTPLVTVVLMTVRPGTLVDCHFAPI 470
>gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 706
Score = 196 bits (423), Expect = 4e-049
Identities = 79/147 (53%), Positives = 104/147 (70%)
Frame = +1 / -2
Query: 586 WDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRFTIRANA 765
WD++ D +++TLDG PV + G +A W S A+P LSVTRT N V+V LDG F+I ANA
Sbjct: 702 WDEEEDHVQITLDGVPVEVEAGKNAQWVSRAMPGLSVTRTDTVNTVVVELDGVFSISANA 523
Query: 766 VPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFDVKASMP 945
VPIT+E+SR+H YG T D L HLDL FKF LT V GV+GQTY S+Y+++ +V A MP
Sbjct: 522 VPITDEDSRIHNYGKTEKDSLVHLDLGFKFHTLTNAVDGVLGQTYHSNYISKVNVTAKMP 343
Query: 946 TMGGDSNYTTSSLFAADCAVARYAPSG 1026
MGG Y ++SLF+ DC V+R+ +G
Sbjct: 342 IMGGAPKYLSASLFSTDCTVSRFHRNG 262
Score = 136 bits (291), Expect = 7e-031
Identities = 66/139 (47%), Positives = 87/139 (62%)
Frame = -2 / +1
Query: 1002 GAVSGEEAGRGVVAVPSHGGH*GLDIEPVDVVGAVRLADHAVHVGGERAELEGQVKVREA 823
GAV GEEAGR V+ +H GH G DI+ DVV V LA+HAVH + ELE +++V EA
Sbjct: 286 GAVCGEEAGREVLGRAAHYGHLGRDIDLADVV*VVGLAEHAVHRIRKGVELEPEIEVHEA 465
Query: 822 VVGRDAVPVHPGLLLCDGHGVGPDGEPAVERDEHAVGRAGAGDGQRRHGAGRPRGVGSRQ 643
++ V V PG+L+ DGHGVG E AVE + V R GA DG+ RHG P G+ +
Sbjct: 466 ILLGLPVVVDPGVLVSDGHGVGGYAEHAVELHDDGVHRVGASDGESRHGPRDPLGILAGL 645
Query: 642 EAHGLAVQGELHAVDVVVP 586
HG V+G+L+ V ++VP
Sbjct: 646 HLHGHPVEGDLNMVLLLVP 702
Score = 118 bits (252), Expect = 2e-025
Identities = 63/127 (49%), Positives = 76/127 (59%)
Frame = -3 / +2
Query: 1010 RATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRC 831
R T QS KRL L +PP++GI A+T L * E VWP+TP T+ V NL RSRC
Sbjct: 278 RETVQSVEKRLAERYLGAPPIMGILAVTLTLLM*FEW*VWPSTPSTAFVRVWNLNPRSRC 457
Query: 830 ARQSSAVTPYRCTLDSSSVMGTALALMVNLPSSETSTPLAALVRVTDSAGTAPDVHAASV 651
R S +V P +SSSVMGTALA M+N PSS T+T VRVT+S G A + H A +
Sbjct: 458 TRLSFSVFP*LWIRESSSVMGTALADMLNTPSSSTTTVFTVSVRVTESPGMALETHWAFL 637
Query: 650 PGRRRTG 630
P TG
Sbjct: 638 PASTSTG 658
>gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H12_O24, mRNA sequence
Length = 775
Score = 149 bits (320), Expect(3) = 4e-046
Identities = 60/87 (68%), Positives = 74/87 (85%)
Frame = +1 / +3
Query: 658 AAWTSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHL 837
A+W+ + PALSV R AANGV+V LDGRF I ANAVP+TEE+SRVH YG+TADD LAHL
Sbjct: 24 ASWSPASAPALSVFRIGAANGVVVRLDGRFRIVANAVPVTEEDSRVHDYGLTADDSLAHL 203
Query: 838 DLAFKFGALTADVHGVVGQTYRSDYVN 918
++AFKF +++ADVHGV+GQTYR DYV+
Sbjct: 204 NVAFKFNSISADVHGVLGQTYRPDYVS 284
Score = 112 bits (240), Expect(2) = 1e-026
Identities = 53/86 (61%), Positives = 58/86 (67%)
Frame = -2 / -3
Query: 915 DVVGAVRLADHAVHVGGERAELEGQVKVREAVVGRDAVPVHPGLLLCDGHGVGPDGEPAV 736
DVV AV LA+HAVHVG + ELE V+VREAVVG +AV V P +LL H VG D EPAV
Sbjct: 281 DVVRAVGLAEHAVHVGADGVELECDVEVREAVVGGEAVVVDPRVLLSHRHRVGDDAEPAV 102
Query: 735 ERDEHAVGRAGAGDGQRRHGAGRPRG 658
E HAVGRA A DGQR G P G
Sbjct: 101 EAHHHAVGRADAEDGQRGRGGRAPAG 24
Score = 111 bits (236), Expect(2) = 7e-026
Identities = 54/93 (58%), Positives = 64/93 (68%)
Frame = -3 / -1
Query: 932 LTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSSVMGTALAL 753
+++ LT*S R VWP+TPCTSA+ NL A RCAR SSAV P TL+SSSV GTALA
Sbjct: 298 MSTPALT*SGR*VWPSTPCTSALMELNLNATLRCARLSSAVRP*SWTLESSSVTGTALAT 119
Query: 752 MVNLPSSETSTPLAALVRVTDSAGTAPDVHAAS 654
M N PS T+TPLAA +R TDSAG + A+
Sbjct: 118 MRNRPSRRTTTPLAAPMRKTDSAGAEAGLQLAA 20
Score = 41.8 bits (85), Expect(3) = 4e-046
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1 / +3
Query: 925 DVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
D+ A +P MGG + Y S +F DC VAR+A
Sbjct: 294 DMGAKIPVMGGAAKYQVSDIFGTDCEVARFA 386
Score = 34.1 bits (68), Expect(3) = 4e-046
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 1039 RDDGVAMVSEIAGITCASGMGGQGVVCKK* 1128
R V M+ E A C SG G G+VCKK*
Sbjct: 402 RVGAVDMIDEPADTMCGSGKGSAGLVCKK* 491
Score = 29.0 bits (57), Expect(2) = 1e-026
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3 / -1
Query: 1127 YFLHTTPWPPMPLAQVMPAISDTIATPSSRSRLPP 1023
+FL T+P P+PL ++ A S ++T +R+ P
Sbjct: 490 HFLQTSPALPLPLPHMVSAGSSIMSTAPTRTTSSP 386
Score = 28.1 bits (55), Expect(2) = 7e-026
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -3 / -1
Query: 1103 PPMPLAQVMPAISDTIATPSSRSRLPPDGA*RATAQSAAKRLDVV*LLSPPMVGIEA 933
P +PL + + ++ +R A RAT+QS K D +PP+ GI A
Sbjct: 472 PALPLPLPHMVSAGSSIMSTAPTRTTSSPAKRATSQSVPKMSDTWYFAAPPITGILA 302
>gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_E06_I12, mRNA sequence
Length = 695
Score = 95.5 bits (202), Expect(2) = 9e-041
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1 / +3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
+CGDPRF G DGN FYFHG++D DFCVLSD DLHINAHFIGK
Sbjct: 357 SCGDPRFTGADGNNFYFHGKKDQDFCVLSDADLHINAHFIGK 482
Score = 93.6 bits (198), Expect(2) = 9e-041
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +1 / +3
Query: 499 MSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGA 678
MSRDFTWIQA+ + F H LY+GA+KT W++DVDR+ELT DGE + + A W S
Sbjct: 495 MSRDFTWIQALGIRFADHRLYMGAQKTTKWNNDVDRLELTFDGESININADIGAKWQSTN 674
Query: 679 VPALSV 696
VP L+V
Sbjct: 675 VPGLTV 692
>gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aestivum cDNA clone
wre1n.pk0080.h10 5' end, mRNA sequence
Length = 488
Score = 134 bits (287), Expect(3) = 4e-039
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = +1 / +2
Query: 691 SVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTA 870
SV R AANGV+V LDG+F I ANAVP+TEE+SR+H YG+TADD LAHL++AFKF +++A
Sbjct: 2 SVLRIGAANGVVVRLDGQFRIVANAVPVTEEDSRIHDYGLTADDSLAHLNVAFKFHSISA 181
Query: 871 DVHGVVGQTYRSDYVN 918
DVHGV+GQTYRSDYV+
Sbjct: 182 DVHGVLGQTYRSDYVS 229
Score = 103 bits (220), Expect(2) = 1e-022
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = -3 / -3
Query: 932 LTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSSVMGTALAL 753
+++ LT*SER VWP+TPCTSA+ NL A RCAR SSAV P L+SSSV GTALA
Sbjct: 243 MSTPALT*SER*VWPSTPCTSALMEWNLNATLRCARLSSAVRP*SWILESSSVTGTALAT 64
Query: 752 MVNLPSSETSTPLAALVRVTD 690
M N PS T+TPLAA +R TD
Sbjct: 63 MRNWPSRRTTTPLAAPMRKTD 1
Score = 41.8 bits (85), Expect(3) = 4e-039
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1 / +2
Query: 925 DVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
D+ A +P MGG + Y S +F DC VAR+A
Sbjct: 239 DMGAKIPVMGGAAKYQVSDIFGTDCEVARFA 331
Score = 25.4 bits (49), Expect(3) = 4e-039
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +3
Query: 1081 TCASGMGGQGVVCKK* 1128
+C SG G G+VC K*
Sbjct: 390 SCGSGKGSAGLVCXK* 437
Score = 24.4 bits (47), Expect(2) = 1e-022
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3 / -3
Query: 1037 SRLPPDGA*RATAQSAAKRLDVV*LLSPPMVGIEA 933
+R A RAT+QS K + +PP+ GI A
Sbjct: 351 TRTTSSPAKRATSQSVPKMSETWYFAAPPITGILA 247
>gb|CA653991.1|CA653991 wre1n.pk189.f9 wre1n Triticum aestivum cDNA clone wre1n.pk189.f9 5'
end, mRNA sequence
Length = 482
Score = 119 bits (255), Expect(2) = 5e-039
Identities = 51/98 (52%), Positives = 65/98 (66%)
Frame = +1 / +2
Query: 601 DRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITE 780
D +E+T DGEP+ + +A W S + LSV RT A N V V L G F+I A+AVPIT+
Sbjct: 2 DHIEITFDGEPINIDTSNNARWVSRTLAGLSVKRTDAVNSVKVDLAGVFSISASAVPITD 181
Query: 781 EESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQ 894
E+S++H YG T D L HLDL FKF +LT V GV+GQ
Sbjct: 182 EDSKIHSYGKTMKDSLVHLDLRFKFHSLTDVVDGVLGQ 295
Score = 63.4 bits (132), Expect(2) = 5e-039
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +1 / +3
Query: 886 VGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSR 1035
+ +TYR DYVN+ +V A MP MGG Y +S F+ DCAV+++ GG++
Sbjct: 288 LAKTYRLDYVNKMNVTAKMPIMGGAPKYLSSGXFSKDCAVSKFQRXGGAK 437
>gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aestivum cDNA clone AZO2120H03,
mRNA sequence
Length = 704
Score = 96.4 bits (204), Expect(2) = 3e-035
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +1 / +3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKH 486
+CGDPRF GGDGN FYFHG+++ DFC+LSD DLHINAHFIG H
Sbjct: 384 SCGDPRFTGGDGNNFYFHGKKNQDFCILSDDDLHINAHFIGNH 512
Score = 74.4 bits (156), Expect(2) = 3e-035
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 502 SRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAV 681
SRDFTWIQA+ V+F H L++GA ++ WD VD +++ D E V L P A W+S +V
Sbjct: 525 SRDFTWIQAVGVMFAHHRLHLGAVRSTRWDSAVDHLDIAFDDERVDLAPADGARWSSTSV 704
Score = 73.9 bits (155), Expect(2) = 2e-022
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -3 / -2
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGSPH 360
LPMK ALMWRS SE QKS PWK*K LPSPP+KRGSPH
Sbjct: 508 LPMKWALMWRSSSERMQKSWFFLPWK*KLLPSPPVKRGSPH 386
Score = 53.8 bits (111), Expect(2) = 2e-022
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = -2 / -1
Query: 681 HGAGRPRGVGSRQEAHGLAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREV 508
HG GRP + + L V+G++ VD VP G GA+VE V E GLDP EV
Sbjct: 704 HGGGRPARAIGGSQIYALVVEGDVKVVDGGVPPGGTDGAEVEAVVGEHDTHGLDPGEV 531
>gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 646
Score = 91.3 bits (193), Expect(2) = 7e-035
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
+CGDPRF G DGN FYFHG++D FCV+SD DLHINAHFIGK
Sbjct: 363 SCGDPRFTGADGNNFYFHGKKDQSFCVVSDADLHINAHFIGK 488
Score = 78.0 bits (164), Expect(2) = 7e-035
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1 / +3
Query: 499 MSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPV 636
MSRDFTWIQA+ + F H LY+ A+KT WD DVDR+EL DG P+
Sbjct: 501 MSRDFTWIQALGIRFADHRLYMAAQKTVEWDSDVDRLELAFDGMPI 638
>gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 91.3 bits (193), Expect(2) = 4e-032
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +2
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
+CGDPRF G DGN FYFHG++D FCV+SD DLHINAHFIGK
Sbjct: 479 SCGDPRFTGADGNNFYFHGKKDQSFCVVSDADLHINAHFIGK 604
Score = 68.9 bits (144), Expect(2) = 4e-032
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 499 MSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMEL 615
MSRDFTWIQA+ + F H LY+GA+KT WD +VDR+EL
Sbjct: 617 MSRDFTWIQALGIRFADHRLYMGAQKTRQWDSNVDRLEL 733
>gb|CK200217.1|CK200217 FGAS008726 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 103 bits (219), Expect(2) = 5e-032
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = +1 / -2
Query: 760 NAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNR 921
N VPITE SRVHRYGVTADDCLAHL+L ALT DVHGVVGQTYRS+YVN+
Sbjct: 687 NPVPITERNSRVHRYGVTADDCLAHLELRSAIDALTDDVHGVVGQTYRSEYVNQ 526
Score = 79.9 bits (168), Expect(2) = 4e-022
Identities = 40/67 (59%), Positives = 46/67 (68%)
Frame = -3 / +2
Query: 965 LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLD 786
L++ P I N LT SERYV PTTP TS+VSA + SRCARQSSAVTP RCTL+
Sbjct: 482 LVAEPPDVISRSPFNWLTYSERYVCPTTPWTSSVSASIAERSSRCARQSSAVTP*RCTLE 661
Query: 785 SSSVMGT 765
SV+GT
Sbjct: 662 FLSVIGT 682
Score = 56.5 bits (117), Expect(2) = 5e-032
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = +1 / -2
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMGGQ 1107
+K + G S S + C G +DG A++SE++ +TCASGM G+
Sbjct: 525 LKGDLDITSGGSATREESTYTPACCRRCSVARYGVSRGNDGAAVLSELSAVTCASGMDGK 346
Query: 1108 GVVCKK*PRRC 1140
GVVCKK* C
Sbjct: 345 GVVCKK*NASC 313
Score = 46.4 bits (95), Expect(2) = 4e-022
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -3 / +2
Query: 1127 YFLHTTPWPPMPLAQVMPAISDTIATPS 1044
YFLHTTP P MPLAQV SD+ A PS
Sbjct: 326 YFLHTTPLPSMPLAQVTAESSDSTAAPS 409
>gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3312_D05_H10,
mRNA sequence
Length = 633
Score = 95.5 bits (202), Expect(2) = 3e-030
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +1 / +2
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKH 486
+CGDPRF GGDGN FYFHG++D DFC++SD LHINAHFIG H
Sbjct: 371 SCGDPRFTGGDGNTFYFHGKKDQDFCIVSDEALHINAHFIGNH 499
Score = 58.3 bits (121), Expect(2) = 3e-030
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 505 RDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTL 621
R+FTWIQAI V F H LYVGARK WD++ D + + L
Sbjct: 515 RNFTWIQAIGVSFGQHRLYVGARKADVWDEEEDHIHVML 631
>gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDNA clone A09_p234_plate_14, mRNA
sequence
Length = 526
Score = 87.7 bits (185), Expect(2) = 7e-024
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1 / +2
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGK 483
+CGDPRF G DGN FYFHG++D FCV+SD DL INAHFIGK
Sbjct: 293 SCGDPRFTGADGNNFYFHGKKDQSFCVVSDADLQINAHFIGK 418
Score = 44.6 bits (91), Expect(2) = 7e-024
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 499 MSRDFTWIQAIAVLFDGHELYVGA 570
MSRDFTWIQA+ + F H LY+GA
Sbjct: 431 MSRDFTWIQALGIRFADHRLYMGA 502
>gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum cDNA clone wr1.pk0044.c3 5' end,
mRNA sequence
Length = 571
Score = 109 bits (233), Expect = 7e-023
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = +1 / +3
Query: 790 RVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNY 969
R+H YG T D L HLDL FKF +LT +V GV+GQTY+ +YV++ D+ A MP MGG Y
Sbjct: 3 RIHNYGKTGSDSLVHLDLGFKFHSLTKNVDGVLGQTYQPEYVSKVDISAKMPIMGGAPKY 182
Query: 970 TTSSLFAADCAVARY 1014
+SSLF+ DCAV+++
Sbjct: 183 LSSSLFSTDCAVSKF 227
>gb|CA652901.1|CA652901 wre1n.pk172.g1 wre1n Triticum aestivum cDNA clone wre1n.pk172.g1 5'
end, mRNA sequence
Length = 358
Score = 104 bits (222), Expect = 2e-021
Identities = 42/76 (55%), Positives = 52/76 (68%)
Frame = +1 / +1
Query: 622 DGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHR 801
DG P+ + DA W S VP L++TRTSA NG+ V L G F I AN VPITE++SR+H
Sbjct: 1 DGMPIDIPTEVDAEWQSTIVPTLTITRTSATNGIRVQLKGVFDILANVVPITEKDSRIHN 180
Query: 802 YGVTADDCLAHLDLAF 849
YGVT +D LAH D+ F
Sbjct: 181 YGVTEEDSLAHFDIGF 228
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,065,934,839
Number of Sequences: 636343
Number of extensions: 18466504
Number of successful extensions: 503977
Number of sequences better than 1.0e-020: 33
length of database: 122,413,413
effective HSP length: 55
effective length of database: 87,414,548
effective search space used: 33479771884
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)